## ENSEMBL VARIANT EFFECT PREDICTOR v95.3 ## Output produced at 2019-03-14 11:51:14 ## Using API version 95, DB version ? ## ensembl-funcgen version 95.94439f4 ## ensembl version 95.4f83453 ## ensembl-variation version 95.858de3e ## ensembl-io version 95.78ccac5 ## Column descriptions: ## Uploaded_variation : Identifier of uploaded variant ## Location : Location of variant in standard coordinate format (chr:start or chr:start-end) ## Allele : The variant allele used to calculate the consequence ## Gene : Stable ID of affected gene ## Feature : Stable ID of feature ## Feature_type : Type of feature - Transcript, RegulatoryFeature or MotifFeature ## Consequence : Consequence type ## cDNA_position : Relative position of base pair in cDNA sequence ## CDS_position : Relative position of base pair in coding sequence ## Protein_position : Relative position of amino acid in protein ## Amino_acids : Reference and variant amino acids ## Codons : Reference and variant codon sequence ## Existing_variation : Identifier(s) of co-located known variants ## Extra column keys: ## IMPACT : Subjective impact classification of consequence type ## DISTANCE : Shortest distance from variant to transcript ## STRAND : Strand of the feature (1/-1) ## FLAGS : Transcript quality flags ## SOURCE : Source of transcript ## gencode.vM20.annotation.gtf.gz : gencode.vM20.annotation.gtf.gz (overlap) #Uploaded_variation Location Allele Gene Feature Feature_type Consequence cDNA_position CDS_position Protein_position Amino_acids Codons Existing_variation Extra chr1_3992542_TT/- chr1:3992542-3992543 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_4748251_T/A chr1:4748251 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_4989325_A/C chr1:4989325 C ENSMUSG00000002459.17 ENSMUST00000002533.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_4989325_A/C chr1:4989325 C ENSMUSG00000002459.17 ENSMUST00000118000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_4989325_A/C chr1:4989325 C ENSMUSG00000002459.17 ENSMUST00000119256.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_4989325_A/C chr1:4989325 C ENSMUSG00000002459.17 ENSMUST00000147158.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_4989325_A/C chr1:4989325 C ENSMUSG00000002459.17 ENSMUST00000156289.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_4989325_A/C chr1:4989325 C ENSMUSG00000002459.17 ENSMUST00000170566.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_5371567_C/- chr1:5371567 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_6410722_GG/- chr1:6410722-6410723 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_7002373_G/A chr1:7002373 A ENSMUSG00000102534.1 ENSMUST00000193423.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3832;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_7636806_AAAAA/-/AAAA chr1:7636806-7636810 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_7636806_AAAAA/-/AAAA chr1:7636806-7636810 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_7731592_TCTC/-/TC chr1:7731592-7731595 - ENSMUSG00000103557.1 ENSMUST00000194872.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1027;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_7731592_TCTC/-/TC chr1:7731592-7731595 TC ENSMUSG00000103557.1 ENSMUST00000194872.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1027;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_8413083_C/A chr1:8413083 A ENSMUSG00000025909.16 ENSMUST00000115484.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_8413083_C/A chr1:8413083 A ENSMUSG00000025909.16 ENSMUST00000115488.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_8413083_C/A chr1:8413083 A ENSMUSG00000025909.16 ENSMUST00000132064.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_8413083_C/A chr1:8413083 A ENSMUSG00000025909.16 ENSMUST00000135046.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_8413083_C/A chr1:8413083 A ENSMUSG00000025909.16 ENSMUST00000140295.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_8413083_C/A chr1:8413083 A ENSMUSG00000025909.16 ENSMUST00000140302.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_8413083_C/A chr1:8413083 A ENSMUSG00000025909.16 ENSMUST00000191683.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9058543_T/C chr1:9058543 C ENSMUSG00000025909.16 ENSMUST00000126083.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9058543_T/C chr1:9058543 C ENSMUSG00000025909.16 ENSMUST00000132064.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9058543_T/C chr1:9058543 C ENSMUSG00000025909.16 ENSMUST00000134075.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9058543_T/C chr1:9058543 C ENSMUSG00000025909.16 ENSMUST00000140295.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9058543_T/C chr1:9058543 C ENSMUSG00000025909.16 ENSMUST00000140302.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9058543_T/C chr1:9058543 C ENSMUSG00000025909.16 ENSMUST00000144593.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9058543_T/C chr1:9058543 C ENSMUSG00000025909.16 ENSMUST00000191683.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9618314_CTCT/- chr1:9618314-9618317 - ENSMUSG00000067879.3 ENSMUST00000088666.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9618314_CTCT/- chr1:9618314-9618317 - ENSMUSG00000079671.8 ENSMUST00000115480.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9618314_CTCT/- chr1:9618314-9618317 - ENSMUSG00000079671.8 ENSMUST00000145176.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9618314_CTCT/- chr1:9618314-9618317 - ENSMUSG00000079671.8 ENSMUST00000148310.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9618314_CTCT/- chr1:9618314-9618317 - ENSMUSG00000079671.8 ENSMUST00000148585.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9618314_CTCT/- chr1:9618314-9618317 - ENSMUSG00000079671.8 ENSMUST00000153239.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9752636_ACAC/- chr1:9752636-9752639 - ENSMUSG00000045210.8 ENSMUST00000057438.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4254;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9752636_ACAC/- chr1:9752636-9752639 - ENSMUSG00000097893.8 ENSMUST00000181358.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9752636_ACAC/- chr1:9752636-9752639 - ENSMUSG00000097893.8 ENSMUST00000181821.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9752636_ACAC/- chr1:9752636-9752639 - ENSMUSG00000097893.8 ENSMUST00000189431.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9752636_ACAC/- chr1:9752636-9752639 - ENSMUSG00000097893.8 ENSMUST00000191287.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9752636_ACAC/- chr1:9752636-9752639 - ENSMUSG00000097893.8 ENSMUST00000207445.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_9752636_ACAC/- chr1:9752636-9752639 - ENSMUSG00000097893.8 ENSMUST00000209020.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_10326523_TCTTT/- chr1:10326523-10326527 - ENSMUSG00000042501.12 ENSMUST00000035577.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_10326523_TCTTT/- chr1:10326523-10326527 - ENSMUSG00000042501.12 ENSMUST00000153695.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11202954_ACAC/-/AC chr1:11202954-11202957 - ENSMUSG00000048960.13 ENSMUST00000027056.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11202954_ACAC/-/AC chr1:11202954-11202957 AC ENSMUSG00000048960.13 ENSMUST00000027056.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11783708_T/C chr1:11783708 C ENSMUSG00000057715.13 ENSMUST00000048613.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11783708_T/C chr1:11783708 C ENSMUSG00000057715.13 ENSMUST00000137824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11783708_T/C chr1:11783708 C ENSMUSG00000057715.13 ENSMUST00000141512.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11783708_T/C chr1:11783708 C ENSMUSG00000057715.13 ENSMUST00000179089.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848898_A/C chr1:11848898 C ENSMUSG00000057715.13 ENSMUST00000048613.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848898_A/C chr1:11848898 C ENSMUSG00000057715.13 ENSMUST00000137824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848898_A/C chr1:11848898 C ENSMUSG00000057715.13 ENSMUST00000141512.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848898_A/C chr1:11848898 C ENSMUSG00000057715.13 ENSMUST00000179089.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848904_ACACT/- chr1:11848904-11848908 - ENSMUSG00000057715.13 ENSMUST00000048613.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848904_ACACT/- chr1:11848904-11848908 - ENSMUSG00000057715.13 ENSMUST00000137824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848904_ACACT/- chr1:11848904-11848908 - ENSMUSG00000057715.13 ENSMUST00000141512.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11848904_ACACT/- chr1:11848904-11848908 - ENSMUSG00000057715.13 ENSMUST00000179089.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11965266_C/A chr1:11965266 A ENSMUSG00000057715.13 ENSMUST00000048613.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11965266_C/A chr1:11965266 A ENSMUSG00000057715.13 ENSMUST00000137824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11965266_C/A chr1:11965266 A ENSMUSG00000057715.13 ENSMUST00000179089.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11965270_G/- chr1:11965270 - ENSMUSG00000057715.13 ENSMUST00000048613.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11965270_G/- chr1:11965270 - ENSMUSG00000057715.13 ENSMUST00000137824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_11965270_G/- chr1:11965270 - ENSMUSG00000057715.13 ENSMUST00000179089.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_12069601_TT/- chr1:12069601-12069602 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_12125853_-/AC chr1:12125852-12125853 AC ENSMUSG00000101610.1 ENSMUST00000187748.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4020;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_12373544_TT/-/T chr1:12373544-12373545 - ENSMUSG00000093864.1 ENSMUST00000179834.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1391;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_12373544_TT/-/T chr1:12373544-12373545 T ENSMUSG00000093864.1 ENSMUST00000179834.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1391;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_12532757_AGAGAG/- chr1:12532757-12532762 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_12610620_G/C chr1:12610620 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_12640178_AAGA/- chr1:12640178-12640181 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_13483926_TT/- chr1:13483926-13483927 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_14934540_GTGT/- chr1:14934540-14934543 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_14988560_T/- chr1:14988560 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_15934615_T/G chr1:15934615 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_15992935_CACA/-/CA chr1:15992935-15992938 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_15992935_CACA/-/CA chr1:15992935-15992938 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_17231826_-/CTTC chr1:17231825-17231826 CTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_17278797_TT/- chr1:17278797-17278798 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_17543302_G/C chr1:17543302 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_17543309_AAT/CCC chr1:17543309-17543311 CCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_17922347_G/C chr1:17922347 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_18223313_C/A chr1:18223313 A ENSMUSG00000070977.4 ENSMUST00000126871.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_18223320_T/G chr1:18223320 G ENSMUSG00000070977.4 ENSMUST00000126871.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_18314673_CACA/- chr1:18314673-18314676 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_18658905_C/T chr1:18658905 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_18821056_T/G chr1:18821056 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_19132230_C/T chr1:19132230 T ENSMUSG00000042596.7 ENSMUST00000037294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_19132230_C/T chr1:19132230 T ENSMUSG00000042596.7 ENSMUST00000149505.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_19687167_TT/- chr1:19687167-19687168 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_19838982_C/T chr1:19838982 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_20365384_C/T chr1:20365384 T ENSMUSG00000043760.16 ENSMUST00000088448.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_20365384_C/T chr1:20365384 T ENSMUSG00000089914.2 ENSMUST00000161509.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_20508465_-/C chr1:20508464-20508465 C ENSMUSG00000043760.16 ENSMUST00000088448.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21185254_CACA/-/CA chr1:21185254-21185257 - ENSMUSG00000100819.1 ENSMUST00000189119.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21185254_CACA/-/CA chr1:21185254-21185257 CA ENSMUSG00000100819.1 ENSMUST00000189119.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21229099_C/T chr1:21229099 T ENSMUSG00000025933.15 ENSMUST00000027064.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21229099_C/T chr1:21229099 T ENSMUSG00000025933.15 ENSMUST00000027065.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21423011_TCTC/- chr1:21423011-21423014 - ENSMUSG00000028033.16 ENSMUST00000029667.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21423011_TCTC/- chr1:21423011-21423014 - ENSMUSG00000028033.16 ENSMUST00000115300.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21423011_TCTC/- chr1:21423011-21423014 - ENSMUSG00000028033.16 ENSMUST00000173058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21423011_TCTC/- chr1:21423011-21423014 - ENSMUSG00000028033.16 ENSMUST00000173404.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21423011_TCTC/- chr1:21423011-21423014 - ENSMUSG00000028033.16 ENSMUST00000174183.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21598393_CACA/- chr1:21598393-21598396 - ENSMUSG00000028033.16 ENSMUST00000029667.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21598393_CACA/- chr1:21598393-21598396 - ENSMUSG00000028033.16 ENSMUST00000115299.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21598393_CACA/- chr1:21598393-21598396 - ENSMUSG00000028033.16 ENSMUST00000115300.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21598393_CACA/- chr1:21598393-21598396 - ENSMUSG00000028033.16 ENSMUST00000134505.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21598393_CACA/- chr1:21598393-21598396 - ENSMUSG00000028033.16 ENSMUST00000173058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21598393_CACA/- chr1:21598393-21598396 - ENSMUSG00000028033.16 ENSMUST00000173404.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_21598393_CACA/- chr1:21598393-21598396 - ENSMUSG00000028033.16 ENSMUST00000174183.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22205958_CTCT/- chr1:22205958-22205961 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 - ENSMUSG00000041670.16 ENSMUST00000081544.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 GTGT ENSMUSG00000041670.16 ENSMUST00000081544.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 - ENSMUSG00000041670.16 ENSMUST00000097809.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 GTGT ENSMUSG00000041670.16 ENSMUST00000097809.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 - ENSMUSG00000041670.16 ENSMUST00000097810.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 GTGT ENSMUSG00000041670.16 ENSMUST00000097810.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 - ENSMUSG00000041670.16 ENSMUST00000097811.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 GTGT ENSMUSG00000041670.16 ENSMUST00000097811.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 - ENSMUSG00000041670.16 ENSMUST00000115273.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 GTGT ENSMUSG00000041670.16 ENSMUST00000115273.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 - ENSMUSG00000041670.16 ENSMUST00000185942.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22359685_GTGTGT/-/GTGT chr1:22359685-22359690 GTGT ENSMUSG00000041670.16 ENSMUST00000185942.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494625_A/C chr1:22494625 C ENSMUSG00000041670.16 ENSMUST00000081544.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494625_A/C chr1:22494625 C ENSMUSG00000041670.16 ENSMUST00000097808.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494625_A/C chr1:22494625 C ENSMUSG00000041670.16 ENSMUST00000097809.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494625_A/C chr1:22494625 C ENSMUSG00000041670.16 ENSMUST00000097810.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494625_A/C chr1:22494625 C ENSMUSG00000041670.16 ENSMUST00000097811.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494625_A/C chr1:22494625 C ENSMUSG00000041670.16 ENSMUST00000115273.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494632_TG/- chr1:22494632-22494633 - ENSMUSG00000041670.16 ENSMUST00000081544.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494632_TG/- chr1:22494632-22494633 - ENSMUSG00000041670.16 ENSMUST00000097808.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494632_TG/- chr1:22494632-22494633 - ENSMUSG00000041670.16 ENSMUST00000097809.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494632_TG/- chr1:22494632-22494633 - ENSMUSG00000041670.16 ENSMUST00000097810.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494632_TG/- chr1:22494632-22494633 - ENSMUSG00000041670.16 ENSMUST00000097811.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_22494632_TG/- chr1:22494632-22494633 - ENSMUSG00000041670.16 ENSMUST00000115273.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_23004572_-/CTACTA chr1:23004571-23004572 CTACTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_23557224_T/A chr1:23557224 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_23882230_TT/- chr1:23882230-23882231 - ENSMUSG00000026155.13 ENSMUST00000027339.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_23882230_TT/- chr1:23882230-23882231 - ENSMUSG00000026155.13 ENSMUST00000129254.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_23882230_TT/- chr1:23882230-23882231 - ENSMUSG00000026155.13 ENSMUST00000133398.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_23882230_TT/- chr1:23882230-23882231 - ENSMUSG00000026155.13 ENSMUST00000141330.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_23882230_TT/- chr1:23882230-23882231 - ENSMUSG00000026155.13 ENSMUST00000149737.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_23965745_TAA/T/AAA chr1:23965745-23965747 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_23965745_TAA/T/AAA chr1:23965745-23965747 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_24503147_-/TTTTC chr1:24503146-24503147 TTTTC ENSMUSG00000026141.13 ENSMUST00000051344.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_24503147_-/TTTTC chr1:24503146-24503147 TTTTC ENSMUSG00000026141.13 ENSMUST00000115244.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_24721453_T/C chr1:24721453 C ENSMUSG00000073725.8 ENSMUST00000095062.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_24721453_T/C chr1:24721453 C ENSMUSG00000073725.8 ENSMUST00000186190.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_24721453_T/C chr1:24721453 C ENSMUSG00000073725.8 ENSMUST00000191471.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_25867732_TATT/- chr1:25867732-25867735 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_26731701_TATA/- chr1:26731701-26731704 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_27021482_C/T chr1:27021482 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_29586520_C/A chr1:29586520 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_29679130_TT/- chr1:29679130-29679131 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_29854412_ATAT/- chr1:29854412-29854415 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_30667214_G/C chr1:30667214 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_31030101_TT/-/TTT chr1:31030101-31030102 - ENSMUSG00000086727.8 ENSMUST00000187892.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31030101_TT/-/TTT chr1:31030101-31030102 TTT ENSMUSG00000086727.8 ENSMUST00000187892.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31030101_TT/-/TTT chr1:31030101-31030102 - ENSMUSG00000086727.8 ENSMUST00000188605.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31030101_TT/-/TTT chr1:31030101-31030102 TTT ENSMUSG00000086727.8 ENSMUST00000188605.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31030101_TT/-/TTT chr1:31030101-31030102 - ENSMUSG00000086727.8 ENSMUST00000233331.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31030101_TT/-/TTT chr1:31030101-31030102 TTT ENSMUSG00000086727.8 ENSMUST00000233331.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31074417_-/CTT chr1:31074416-31074417 CTT ENSMUSG00000086727.8 ENSMUST00000187892.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31074417_-/CTT chr1:31074416-31074417 CTT ENSMUSG00000086727.8 ENSMUST00000188605.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31074417_-/CTT chr1:31074416-31074417 CTT ENSMUSG00000086727.8 ENSMUST00000233331.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 G ENSMUSG00000086727.8 ENSMUST00000127775.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 ACACA ENSMUSG00000086727.8 ENSMUST00000127775.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 G ENSMUSG00000086727.8 ENSMUST00000135245.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 ACACA ENSMUSG00000086727.8 ENSMUST00000135245.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 G ENSMUSG00000086727.8 ENSMUST00000187659.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 ACACA ENSMUSG00000086727.8 ENSMUST00000187659.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 G ENSMUSG00000086727.8 ENSMUST00000187892.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 ACACA ENSMUSG00000086727.8 ENSMUST00000187892.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 G ENSMUSG00000086727.8 ENSMUST00000233331.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_31215500_GCACA/G/ACACA chr1:31215500-31215504 ACACA ENSMUSG00000086727.8 ENSMUST00000233331.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 - ENSMUSG00000026058.11 ENSMUST00000027226.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 AAA ENSMUSG00000026058.11 ENSMUST00000027226.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 - ENSMUSG00000026058.11 ENSMUST00000185666.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 AAA ENSMUSG00000026058.11 ENSMUST00000185666.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 - ENSMUSG00000026058.11 ENSMUST00000188257.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 AAA ENSMUSG00000026058.11 ENSMUST00000188257.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 - ENSMUSG00000026058.11 ENSMUST00000189878.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32220891_AA/-/AAA chr1:32220891-32220892 AAA ENSMUSG00000026058.11 ENSMUST00000189878.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_32556883_-/CACA chr1:32556882-32556883 CACA ENSMUSG00000026058.11 ENSMUST00000027226.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_33046253_A/T chr1:33046253 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_33467242_TGTG/-/TG chr1:33467242-33467245 - ENSMUSG00000026134.11 ENSMUST00000027312.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_33467242_TGTG/-/TG chr1:33467242-33467245 TG ENSMUSG00000026134.11 ENSMUST00000027312.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_33762998_AA/- chr1:33762998-33762999 - ENSMUSG00000042197.13 ENSMUST00000019861.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_33762998_AA/- chr1:33762998-33762999 - ENSMUSG00000042197.13 ENSMUST00000139143.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000097785.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000097785.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000097786.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000097786.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000115104.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000115104.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000182018.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000182018.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000182507.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=125;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000182507.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=125;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000183034.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000183034.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000183100.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3313;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000183100.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3313;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 - ENSMUSG00000026131.18 ENSMUST00000185269.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34306776_GAGA/-/GA chr1:34306776-34306779 GA ENSMUSG00000026131.18 ENSMUST00000185269.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_34961187_GAGA/- chr1:34961187-34961190 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_34977120_T/C chr1:34977120 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_35405069_TCTC/- chr1:35405069-35405072 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_35781928_-/TATC chr1:35781927-35781928 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_35876636_ACATATATATATATATATGTATATATACACATGTGTGTATATAT/- chr1:35876636-35876679 - ENSMUSG00000102531.1 ENSMUST00000194261.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3166;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_36398568_-/GATA chr1:36398567-36398568 GATA ENSMUSG00000037432.15 ENSMUST00000179162.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_36398568_-/GATA chr1:36398567-36398568 GATA ENSMUSG00000037432.15 ENSMUST00000202030.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_37319334_GTGCGTGCGTGTGTGTGTGTGCGTGTGTATGTGTGTGTGCATACGTGTGTGTGTGCACGCGTACGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTACGTGTGTGTGTGCGCGCGCGTAC/- chr1:37319334-37319499 - ENSMUSG00000026113.17 ENSMUST00000027287.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_37319334_GTGCGTGCGTGTGTGTGTGTGCGTGTGTATGTGTGTGTGCATACGTGTGTGTGTGCACGCGTACGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTACGTGTGTGTGTGCGCGCGCGTAC/- chr1:37319334-37319499 - ENSMUSG00000026113.17 ENSMUST00000132401.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_37319334_GTGCGTGCGTGTGTGTGTGTGCGTGTGTATGTGTGTGTGCATACGTGTGTGTGTGCACGCGTACGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTACGTGTGTGTGTGCGCGCGCGTAC/- chr1:37319334-37319499 - ENSMUSG00000026113.17 ENSMUST00000136846.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_37319334_GTGCGTGCGTGTGTGTGTGTGCGTGTGTATGTGTGTGTGCATACGTGTGTGTGTGCACGCGTACGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTACGTGTGTGTGTGCGCGCGCGTAC/- chr1:37319334-37319499 - ENSMUSG00000026113.17 ENSMUST00000140264.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_37319334_GTGCGTGCGTGTGTGTGTGTGCGTGTGTATGTGTGTGTGCATACGTGTGTGTGTGCACGCGTACGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTACGTGTGTGTGTGCGCGCGCGTAC/- chr1:37319334-37319499 - ENSMUSG00000026113.17 ENSMUST00000146676.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_38027918_TT/- chr1:38027918-38027919 - ENSMUSG00000026083.12 ENSMUST00000027252.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_38027918_TT/- chr1:38027918-38027919 - ENSMUSG00000026083.12 ENSMUST00000192548.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_38593884_TT/- chr1:38593884-38593885 - ENSMUSG00000037138.17 ENSMUST00000027250.13 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_38593884_TT/- chr1:38593884-38593885 - ENSMUSG00000037138.17 ENSMUST00000039827.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_38593884_TT/- chr1:38593884-38593885 - ENSMUSG00000037138.17 ENSMUST00000095027.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_38593884_TT/- chr1:38593884-38593885 - ENSMUSG00000037138.17 ENSMUST00000134963.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_38593884_TT/- chr1:38593884-38593885 - ENSMUSG00000037138.17 ENSMUST00000212668.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_39150962_A/C chr1:39150962 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_39543669_CA/TG chr1:39543669-39543670 TG ENSMUSG00000003135.15 ENSMUST00000003219.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_39543669_CA/TG chr1:39543669-39543670 TG ENSMUSG00000085894.1 ENSMUST00000146314.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3900;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_39543669_CA/TG chr1:39543669-39543670 TG ENSMUSG00000003135.15 ENSMUST00000160145.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_39543669_CA/TG chr1:39543669-39543670 TG ENSMUSG00000003135.15 ENSMUST00000161515.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_39543669_CA/TG chr1:39543669-39543670 TG ENSMUSG00000003135.15 ENSMUST00000195567.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_39675870_-/TCTA chr1:39675869-39675870 TCTA ENSMUSG00000057173.8 ENSMUST00000151913.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_40068298_G/C chr1:40068298 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_40129752_TT/- chr1:40129752-40129753 - ENSMUSG00000026073.13 ENSMUST00000027243.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4521;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_40129752_TT/- chr1:40129752-40129753 - ENSMUSG00000026073.13 ENSMUST00000195770.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4533;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_41309687_-/GAAGAGC chr1:41309686-41309687 GAAGAGC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_41313419_-/TTCT chr1:41313418-41313419 TTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_41507006_-/TTCTC chr1:41507005-41507006 TTCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_41756709_-/TATC chr1:41756708-41756709 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_41854510_-/TATGTC chr1:41854509-41854510 TATGTC ENSMUSG00000100832.1 ENSMUST00000186391.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42131097_TTT/-/TTTT chr1:42131097-42131099 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_42131097_TTT/-/TTTT chr1:42131097-42131099 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_42378064_GG/- chr1:42378064-42378065 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000177136.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4942;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000180689.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000181593.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000181660.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000181725.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000185599.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000186656.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42688085_-/GTGT chr1:42688084-42688085 GTGT ENSMUSG00000060424.14 ENSMUST00000188153.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42712953_TGTG/- chr1:42712953-42712956 - ENSMUSG00000093436.6 ENSMUST00000176807.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42712953_TGTG/- chr1:42712953-42712956 - ENSMUSG00000097063.3 ENSMUST00000180589.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42712953_TGTG/- chr1:42712953-42712956 - ENSMUSG00000097063.3 ENSMUST00000192894.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4901;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_42712953_TGTG/- chr1:42712953-42712956 - ENSMUSG00000093436.6 ENSMUST00000199521.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_43112936_GTGT/-/GT chr1:43112936-43112939 - ENSMUSG00000010290.7 ENSMUST00000010434.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_43112936_GTGT/-/GT chr1:43112936-43112939 GT ENSMUSG00000010290.7 ENSMUST00000010434.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_43666720_GTGT/-/GT chr1:43666720-43666723 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_43666720_GTGT/-/GT chr1:43666720-43666723 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_44169108_TCTA/- chr1:44169108-44169111 - ENSMUSG00000026048.16 ENSMUST00000027214.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44169108_TCTA/- chr1:44169108-44169111 - ENSMUSG00000026048.16 ENSMUST00000131177.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44169108_TCTA/- chr1:44169108-44169111 - ENSMUSG00000026048.16 ENSMUST00000137380.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2110;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44169108_TCTA/- chr1:44169108-44169111 - ENSMUSG00000026048.16 ENSMUST00000155862.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1891;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44496027_TT/- chr1:44496027-44496028 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_44652432_TT/-/TTT chr1:44652432-44652433 - ENSMUSG00000056870.9 ENSMUST00000074525.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 TTT ENSMUSG00000056870.9 ENSMUST00000074525.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 - ENSMUSG00000056870.9 ENSMUST00000159555.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 TTT ENSMUSG00000056870.9 ENSMUST00000159555.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 - ENSMUSG00000056870.9 ENSMUST00000160854.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 TTT ENSMUSG00000056870.9 ENSMUST00000160854.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 - ENSMUSG00000056870.9 ENSMUST00000161066.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 TTT ENSMUSG00000056870.9 ENSMUST00000161066.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 - ENSMUSG00000056870.9 ENSMUST00000161793.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44652432_TT/-/TTT chr1:44652432-44652433 TTT ENSMUSG00000056870.9 ENSMUST00000161793.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44800108_-/ATCT chr1:44800107-44800108 ATCT ENSMUSG00000056870.9 ENSMUST00000074525.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3269;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44800108_-/ATCT chr1:44800107-44800108 ATCT ENSMUSG00000056870.9 ENSMUST00000159555.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3281;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_44800108_-/ATCT chr1:44800107-44800108 ATCT ENSMUSG00000056870.9 ENSMUST00000162600.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3282;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_45097133_T/C chr1:45097133 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_45165682_G/A chr1:45165682 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_45241100_TTT/- chr1:45241100-45241102 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_46071761_T/C chr1:46071761 C ENSMUSG00000041144.10 ENSMUST00000069293.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46071761_T/C chr1:46071761 C ENSMUSG00000041144.10 ENSMUST00000188209.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4381;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46272730_GAGA/-/GAGAGA chr1:46272730-46272733 - ENSMUSG00000041144.10 ENSMUST00000069293.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46272730_GAGA/-/GAGAGA chr1:46272730-46272733 GAGAGA ENSMUSG00000041144.10 ENSMUST00000069293.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46272730_GAGA/-/GAGAGA chr1:46272730-46272733 - ENSMUSG00000041144.10 ENSMUST00000187548.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1540;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46272730_GAGA/-/GAGAGA chr1:46272730-46272733 GAGAGA ENSMUSG00000041144.10 ENSMUST00000187548.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1540;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46639859_G/T chr1:46639859 T ENSMUSG00000101337.6 ENSMUST00000189339.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46639859_G/T chr1:46639859 T ENSMUSG00000101337.6 ENSMUST00000189749.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_46639859_G/T chr1:46639859 T ENSMUSG00000101337.6 ENSMUST00000191499.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=372;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_47088250_T/C chr1:47088250 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_47621014_CACA/- chr1:47621014-47621017 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_48105360_-/TTTA chr1:48105359-48105360 TTTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_48538241_AAA/-/AAAAAAAAAAAAAAAA chr1:48538241-48538243 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_48538241_AAA/-/AAAAAAAAAAAAAAAA chr1:48538241-48538243 AAAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_49506910_AT/- chr1:49506910-49506911 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_49615856_C/A chr1:49615856 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_50009431_-/TTTTTTTTTTT chr1:50009430-50009431 TTTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_50401370_A/C chr1:50401370 C ENSMUSG00000100451.1 ENSMUST00000191457.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3291;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_50534042_-/TAGA chr1:50534041-50534042 TAGA ENSMUSG00000099941.1 ENSMUST00000187207.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=850;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_51442128_C/A chr1:51442128 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000114509.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=900;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000114510.7 Transcript 3_prime_UTR_variant 5320-5323 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000114512.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000114513.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000129107.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000138906.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000155587.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=900;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52184377_TCTC/- chr1:52184377-52184380 - ENSMUSG00000026103.14 ENSMUST00000156887.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52460901_TT/- chr1:52460901-52460902 - ENSMUSG00000002881.14 ENSMUST00000069792.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52460901_TT/- chr1:52460901-52460902 - ENSMUSG00000002881.14 ENSMUST00000167732.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52460901_TT/- chr1:52460901-52460902 - ENSMUSG00000002881.14 ENSMUST00000170269.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52460901_TT/- chr1:52460901-52460902 - ENSMUSG00000002881.14 ENSMUST00000186764.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52893701_T/A chr1:52893701 A ENSMUSG00000041426.12 ENSMUST00000044478.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52893701_T/A chr1:52893701 A ENSMUSG00000041426.12 ENSMUST00000159352.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_52893701_T/A chr1:52893701 A ENSMUSG00000041426.12 ENSMUST00000159431.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 - ENSMUSG00000042807.15 ENSMUST00000087659.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 TG ENSMUSG00000042807.15 ENSMUST00000087659.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 - ENSMUSG00000042807.15 ENSMUST00000097741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 TG ENSMUSG00000042807.15 ENSMUST00000097741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 - ENSMUSG00000042807.15 ENSMUST00000120904.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 TG ENSMUSG00000042807.15 ENSMUST00000120904.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 - ENSMUSG00000042807.15 ENSMUST00000146850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53967573_TGTG/-/TG chr1:53967573-53967576 TG ENSMUSG00000042807.15 ENSMUST00000146850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53984546_GTGT/- chr1:53984546-53984549 - ENSMUSG00000042807.15 ENSMUST00000087659.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53984546_GTGT/- chr1:53984546-53984549 - ENSMUSG00000042807.15 ENSMUST00000097741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53984546_GTGT/- chr1:53984546-53984549 - ENSMUSG00000042807.15 ENSMUST00000120904.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53984546_GTGT/- chr1:53984546-53984549 - ENSMUSG00000042807.15 ENSMUST00000146850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53999201_AGAGAG/- chr1:53999201-53999206 - ENSMUSG00000042807.15 ENSMUST00000087659.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53999201_AGAGAG/- chr1:53999201-53999206 - ENSMUSG00000042807.15 ENSMUST00000097741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53999201_AGAGAG/- chr1:53999201-53999206 - ENSMUSG00000042807.15 ENSMUST00000120904.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_53999201_AGAGAG/- chr1:53999201-53999206 - ENSMUSG00000042807.15 ENSMUST00000146850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_54475341_TT/-/T chr1:54475341-54475342 - ENSMUSG00000073678.4 ENSMUST00000097739.4 Transcript 3_prime_UTR_variant 8235-8236 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_54475341_TT/-/T chr1:54475341-54475342 T ENSMUSG00000073678.4 ENSMUST00000097739.4 Transcript 3_prime_UTR_variant 8235-8236 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_55606050_TT/-/T/TTT chr1:55606050-55606051 - ENSMUSG00000038349.10 ENSMUST00000042986.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_55606050_TT/-/T/TTT chr1:55606050-55606051 T ENSMUSG00000038349.10 ENSMUST00000042986.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_55606050_TT/-/T/TTT chr1:55606050-55606051 TTT ENSMUSG00000038349.10 ENSMUST00000042986.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_55802579_GTGT/-/GT chr1:55802579-55802582 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_55802579_GTGT/-/GT chr1:55802579-55802582 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_55835568_TT/- chr1:55835568-55835569 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_56265759_GTGT/- chr1:56265759-56265762 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_56425798_A/T chr1:56425798 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_57662085_GTGT/- chr1:57662085-57662088 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000163239.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000164302.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000165235.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000167085.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000167971.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000168016.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000168905.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000170139.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000171699.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000172068.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_57807443_C/G chr1:57807443 G ENSMUSG00000038305.15 ENSMUST00000172287.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_58652431_TTTT/-/TTT chr1:58652431-58652434 - ENSMUSG00000102059.1 ENSMUST00000185352.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=207;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_58652431_TTTT/-/TTT chr1:58652431-58652434 TTT ENSMUSG00000102059.1 ENSMUST00000185352.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=207;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_58652431_TTTT/-/TTT chr1:58652431-58652434 - ENSMUSG00000102059.1 ENSMUST00000188643.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2511;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_58652431_TTTT/-/TTT chr1:58652431-58652434 TTT ENSMUSG00000102059.1 ENSMUST00000188643.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2511;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_58652431_TTTT/-/TTT chr1:58652431-58652434 - ENSMUSG00000047528.13 ENSMUST00000188772.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_58652431_TTTT/-/TTT chr1:58652431-58652434 TTT ENSMUSG00000047528.13 ENSMUST00000188772.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59587186_T/C chr1:59587186 C ENSMUSG00000047361.16 ENSMUST00000114243.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59587186_T/C chr1:59587186 C ENSMUSG00000026021.15 ENSMUST00000191158.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59587186_T/C chr1:59587186 C ENSMUSG00000047361.16 ENSMUST00000212835.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59668988_-/AAAAAAAAAAAAAAAAAAAA chr1:59668987-59668988 AAAAAAAAAAAAAAAAAAAA ENSMUSG00000026021.15 ENSMUST00000091374.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59668988_-/AAAAAAAAAAAAAAAAAAAA chr1:59668987-59668988 AAAAAAAAAAAAAAAAAAAA ENSMUSG00000026021.15 ENSMUST00000123857.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59668988_-/AAAAAAAAAAAAAAAAAAAA chr1:59668987-59668988 AAAAAAAAAAAAAAAAAAAA ENSMUSG00000026021.15 ENSMUST00000185265.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59668988_-/AAAAAAAAAAAAAAAAAAAA chr1:59668987-59668988 AAAAAAAAAAAAAAAAAAAA ENSMUSG00000101400.1 ENSMUST00000185710.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4253;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59668988_-/AAAAAAAAAAAAAAAAAAAA chr1:59668987-59668988 AAAAAAAAAAAAAAAAAAAA ENSMUSG00000026021.15 ENSMUST00000191158.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59804334_ACACAC/-/ACAC chr1:59804334-59804339 - ENSMUSG00000067336.6 ENSMUST00000087435.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59804334_ACACAC/-/ACAC chr1:59804334-59804339 ACAC ENSMUSG00000067336.6 ENSMUST00000087435.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59804334_ACACAC/-/ACAC chr1:59804334-59804339 - ENSMUSG00000104052.1 ENSMUST00000194136.1 Transcript non_coding_transcript_exon_variant 3072-3077 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_59804334_ACACAC/-/ACAC chr1:59804334-59804339 ACAC ENSMUSG00000104052.1 ENSMUST00000194136.1 Transcript non_coding_transcript_exon_variant 3072-3077 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_60698201_TTTT/-/TTT chr1:60698201-60698204 - ENSMUSG00000084151.1 ENSMUST00000118030.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2668;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_60698201_TTTT/-/TTT chr1:60698201-60698204 TTT ENSMUSG00000084151.1 ENSMUST00000118030.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2668;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_61046125_T/A chr1:61046125 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_61497892_G/A chr1:61497892 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_62490049_-/TCTTTCTTTCTT chr1:62490048-62490049 TCTTTCTTTCTT ENSMUSG00000052062.14 ENSMUST00000046673.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_62490049_-/TCTTTCTTTCTT chr1:62490048-62490049 TCTTTCTTTCTT ENSMUSG00000052062.14 ENSMUST00000075374.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_62490049_-/TCTTTCTTTCTT chr1:62490048-62490049 TCTTTCTTTCTT ENSMUSG00000052062.14 ENSMUST00000094906.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_62490049_-/TCTTTCTTTCTT chr1:62490048-62490049 TCTTTCTTTCTT ENSMUSG00000085400.1 ENSMUST00000147177.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 - ENSMUSG00000046856.13 ENSMUST00000050536.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 AG ENSMUSG00000046856.13 ENSMUST00000050536.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 - ENSMUSG00000086730.2 ENSMUST00000141027.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4772;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 AG ENSMUSG00000086730.2 ENSMUST00000141027.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4772;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 - ENSMUSG00000046856.13 ENSMUST00000187533.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 AG ENSMUSG00000046856.13 ENSMUST00000187533.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 - ENSMUSG00000086730.2 ENSMUST00000189722.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4419;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63212386_AGAG/-/AG chr1:63212386-63212389 AG ENSMUSG00000086730.2 ENSMUST00000189722.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4419;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_63433907_GTGTGT/- chr1:63433907-63433912 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_63440465_ATATA/- chr1:63440465-63440469 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_63804362_T/C chr1:63804362 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_63836265_A/G chr1:63836265 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_65217715_TT/- chr1:65217715-65217716 - ENSMUSG00000025949.16 ENSMUST00000081154.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_65217715_TT/- chr1:65217715-65217716 - ENSMUSG00000025949.16 ENSMUST00000097707.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_65217715_TT/- chr1:65217715-65217716 - ENSMUSG00000025949.16 ENSMUST00000186404.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_65217715_TT/- chr1:65217715-65217716 - ENSMUSG00000025949.16 ENSMUST00000188799.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_65217715_TT/- chr1:65217715-65217716 - ENSMUSG00000025949.16 ENSMUST00000190058.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_65217715_TT/- chr1:65217715-65217716 - ENSMUSG00000025949.16 ENSMUST00000190847.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1453;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_65946568_-/TATA chr1:65946567-65946568 TATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_66834053_AA/- chr1:66834053-66834054 - ENSMUSG00000026003.5 ENSMUST00000027153.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_66840800_T/G chr1:66840800 G ENSMUSG00000026003.5 ENSMUST00000027153.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_66840800_T/G chr1:66840800 G ENSMUSG00000026003.5 ENSMUST00000139208.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_66866932_AA/- chr1:66866932-66866933 - ENSMUSG00000026003.5 ENSMUST00000027153.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3655;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_66866932_AA/- chr1:66866932-66866933 - ENSMUSG00000077328.1 ENSMUST00000104140.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=6;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_66870929_CTCT/- chr1:66870929-66870932 - ENSMUSG00000077328.1 ENSMUST00000104140.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4003;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_67505590_C/T chr1:67505590 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_68309793_CA/C/AA chr1:68309793-68309794 C ENSMUSG00000062209.15 ENSMUST00000119142.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_68309793_CA/C/AA chr1:68309793-68309794 AA ENSMUSG00000062209.15 ENSMUST00000119142.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_68309793_CA/C/AA chr1:68309793-68309794 C ENSMUSG00000062209.15 ENSMUST00000121473.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_68309793_CA/C/AA chr1:68309793-68309794 AA ENSMUSG00000062209.15 ENSMUST00000121473.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_68309793_CA/C/AA chr1:68309793-68309794 C ENSMUSG00000062209.15 ENSMUST00000126682.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_68309793_CA/C/AA chr1:68309793-68309794 AA ENSMUSG00000062209.15 ENSMUST00000126682.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_68309793_CA/C/AA chr1:68309793-68309794 C ENSMUSG00000062209.15 ENSMUST00000153432.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_68309793_CA/C/AA chr1:68309793-68309794 AA ENSMUSG00000062209.15 ENSMUST00000153432.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_69883494_-/AAAAAAAA chr1:69883493-69883494 AAAAAAAA ENSMUSG00000053153.14 ENSMUST00000065425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_69883494_-/AAAAAAAA chr1:69883493-69883494 AAAAAAAA ENSMUSG00000053153.14 ENSMUST00000113940.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_69883494_-/AAAAAAAA chr1:69883493-69883494 AAAAAAAA ENSMUSG00000053153.14 ENSMUST00000187159.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_69883494_-/AAAAAAAA chr1:69883493-69883494 AAAAAAAA ENSMUSG00000053153.14 ENSMUST00000190833.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70373353_A/- chr1:70373353 - ENSMUSG00000053153.14 ENSMUST00000065425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70373353_A/- chr1:70373353 - ENSMUSG00000053153.14 ENSMUST00000161310.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70487653_ACAC/- chr1:70487653-70487656 - ENSMUSG00000053153.14 ENSMUST00000065425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70487653_ACAC/- chr1:70487653-70487656 - ENSMUSG00000053153.14 ENSMUST00000161310.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70498339_AAAC/- chr1:70498339-70498342 - ENSMUSG00000053153.14 ENSMUST00000065425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70498339_AAAC/- chr1:70498339-70498342 - ENSMUSG00000053153.14 ENSMUST00000161310.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70524541_AGAG/- chr1:70524541-70524544 - ENSMUSG00000053153.14 ENSMUST00000065425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70524541_AGAG/- chr1:70524541-70524544 - ENSMUSG00000053153.14 ENSMUST00000161310.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70590947_GTGT/- chr1:70590947-70590950 - ENSMUSG00000053153.14 ENSMUST00000065425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70590947_GTGT/- chr1:70590947-70590950 - ENSMUSG00000053153.14 ENSMUST00000161310.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70709935_TGTG/- chr1:70709935-70709938 - ENSMUSG00000053153.14 ENSMUST00000065425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_70709935_TGTG/- chr1:70709935-70709938 - ENSMUSG00000053153.14 ENSMUST00000161310.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000055226.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000073652.10 ENSMUST00000097699.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2504;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000073652.10 ENSMUST00000125934.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3006;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000073652.10 ENSMUST00000126516.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3002;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000073652.10 ENSMUST00000127218.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2555;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000186129.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000186736.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000186879.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000186940.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000187938.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000188674.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000188894.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000189821.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_71650330_CACA/- chr1:71650330-71650333 - ENSMUSG00000026193.15 ENSMUST00000190780.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72176940_A/C chr1:72176940 C ENSMUSG00000039395.8 ENSMUST00000048860.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 - ENSMUSG00000039354.16 ENSMUST00000047615.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 AC ENSMUSG00000039354.16 ENSMUST00000047615.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 - ENSMUSG00000039354.16 ENSMUST00000136498.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 AC ENSMUSG00000039354.16 ENSMUST00000136498.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 - ENSMUSG00000039354.16 ENSMUST00000150725.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 AC ENSMUSG00000039354.16 ENSMUST00000150725.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 - ENSMUSG00000039354.16 ENSMUST00000152225.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 AC ENSMUSG00000039354.16 ENSMUST00000152225.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 - ENSMUSG00000039354.16 ENSMUST00000156797.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2529;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72601928_ACAC/-/AC chr1:72601928-72601931 AC ENSMUSG00000039354.16 ENSMUST00000156797.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2529;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_72965860_TGTG/- chr1:72965860-72965863 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_73831229_T/C chr1:73831229 C ENSMUSG00000101344.1 ENSMUST00000188600.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_73831229_T/C chr1:73831229 C ENSMUSG00000100301.6 ENSMUST00000189514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_73831252_T/C chr1:73831252 C ENSMUSG00000101344.1 ENSMUST00000188600.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_73831252_T/C chr1:73831252 C ENSMUSG00000100301.6 ENSMUST00000189514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 - ENSMUSG00000055322.15 ENSMUST00000169786.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 CT ENSMUSG00000055322.15 ENSMUST00000169786.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 - ENSMUSG00000055322.15 ENSMUST00000187584.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 CT ENSMUSG00000055322.15 ENSMUST00000187584.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 - ENSMUSG00000055322.15 ENSMUST00000188208.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 CT ENSMUSG00000055322.15 ENSMUST00000188208.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 - ENSMUSG00000055322.15 ENSMUST00000191104.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 CT ENSMUSG00000055322.15 ENSMUST00000191104.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 - ENSMUSG00000055322.15 ENSMUST00000191204.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 CT ENSMUSG00000055322.15 ENSMUST00000191204.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 - ENSMUSG00000055322.15 ENSMUST00000212888.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74071871_CTCT/-/CT chr1:74071871-74071874 CT ENSMUSG00000055322.15 ENSMUST00000212888.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74137984_CTTTC/- chr1:74137984-74137988 - ENSMUSG00000061815.11 ENSMUST00000080167.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74137984_CTTTC/- chr1:74137984-74137988 - ENSMUSG00000061815.11 ENSMUST00000127134.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74316268_GAGA/- chr1:74316268-74316271 - ENSMUSG00000026179.14 ENSMUST00000027370.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74316268_GAGA/- chr1:74316268-74316271 - ENSMUSG00000026179.14 ENSMUST00000087226.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74316268_GAGA/- chr1:74316268-74316271 - ENSMUSG00000026179.14 ENSMUST00000138620.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74767516_T/C chr1:74767516 C ENSMUSG00000033227.7 ENSMUST00000006716.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4376;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_74767516_T/C chr1:74767516 C ENSMUSG00000098351.1 ENSMUST00000184199.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2626;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75152226_-/TAGA chr1:75152225-75152226 TAGA ENSMUSG00000049339.16 ENSMUST00000097694.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4312;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75152226_-/TAGA chr1:75152225-75152226 TAGA ENSMUSG00000049339.16 ENSMUST00000186037.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4318;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75152226_-/TAGA chr1:75152225-75152226 TAGA ENSMUSG00000049339.16 ENSMUST00000188873.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4316;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75152226_-/TAGA chr1:75152225-75152226 TAGA ENSMUSG00000049339.16 ENSMUST00000190240.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4316;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000033007.15 ENSMUST00000037708.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2779;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000033007.15 ENSMUST00000037708.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2779;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000051703.14 ENSMUST00000050899.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2457;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000051703.14 ENSMUST00000050899.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2457;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000032997.16 ENSMUST00000079205.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000032997.16 ENSMUST00000079205.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000032997.16 ENSMUST00000094818.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000032997.16 ENSMUST00000094818.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000051703.14 ENSMUST00000113575.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2409;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000051703.14 ENSMUST00000113575.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2409;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000033007.15 ENSMUST00000113577.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2782;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000033007.15 ENSMUST00000113577.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2782;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000032997.16 ENSMUST00000124042.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=387;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000032997.16 ENSMUST00000124042.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=387;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000032997.16 ENSMUST00000138683.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000032997.16 ENSMUST00000138683.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000032997.16 ENSMUST00000143496.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000032997.16 ENSMUST00000143496.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000051703.14 ENSMUST00000148980.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2453;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000051703.14 ENSMUST00000148980.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2453;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000026211.17 ENSMUST00000156499.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2187;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000026211.17 ENSMUST00000156499.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2187;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 - ENSMUSG00000051703.14 ENSMUST00000187411.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2581;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_75477122_AA/-/A chr1:75477122-75477123 A ENSMUSG00000051703.14 ENSMUST00000187411.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2581;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_76066326_T/C chr1:76066326 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_77103021_-/GT chr1:77103020-77103021 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_77234566_AA/- chr1:77234566-77234567 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_77577859_ACACAC/- chr1:77577859-77577864 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_77914727_ACAC/- chr1:77914727-77914730 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_78571840_TCTT/- chr1:78571840-78571843 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_78630735_GTGT/- chr1:78630735-78630738 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_79025762_-/AG chr1:79025761-79025762 AG ENSMUSG00000099706.1 ENSMUST00000189296.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_80935400_GT/- chr1:80935400-80935401 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_81820603_ACAC/- chr1:81820603-81820606 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_81861904_G/T chr1:81861904 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_83327558_TGTG/-/TG chr1:83327558-83327561 - ENSMUSG00000026163.17 ENSMUST00000053075.14 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_83327558_TGTG/-/TG chr1:83327558-83327561 TG ENSMUSG00000026163.17 ENSMUST00000053075.14 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_83327558_TGTG/-/TG chr1:83327558-83327561 - ENSMUSG00000026163.17 ENSMUST00000160953.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_83327558_TGTG/-/TG chr1:83327558-83327561 TG ENSMUSG00000026163.17 ENSMUST00000160953.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_83327558_TGTG/-/TG chr1:83327558-83327561 - ENSMUSG00000104374.1 ENSMUST00000194004.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3737;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_83327558_TGTG/-/TG chr1:83327558-83327561 TG ENSMUSG00000104374.1 ENSMUST00000194004.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3737;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_83522502_G/T chr1:83522502 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_83840299_C/T chr1:83840299 T ENSMUSG00000100580.6 ENSMUST00000189405.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_83840299_C/T chr1:83840299 T ENSMUSG00000100580.6 ENSMUST00000190615.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84225095_AA/- chr1:84225095-84225096 - ENSMUSG00000045658.16 ENSMUST00000168574.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84225095_AA/- chr1:84225095-84225096 - ENSMUSG00000045658.16 ENSMUST00000175996.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84225095_AA/- chr1:84225095-84225096 - ENSMUSG00000045658.16 ENSMUST00000176559.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84225095_AA/- chr1:84225095-84225096 - ENSMUSG00000045658.16 ENSMUST00000176720.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84225095_AA/- chr1:84225095-84225096 - ENSMUSG00000045658.16 ENSMUST00000176822.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84225095_AA/- chr1:84225095-84225096 - ENSMUSG00000045658.16 ENSMUST00000177458.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84246864_GATA/- chr1:84246864-84246867 - ENSMUSG00000045658.16 ENSMUST00000168574.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84246864_GATA/- chr1:84246864-84246867 - ENSMUSG00000045658.16 ENSMUST00000175996.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84246864_GATA/- chr1:84246864-84246867 - ENSMUSG00000045658.16 ENSMUST00000176559.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84246864_GATA/- chr1:84246864-84246867 - ENSMUSG00000045658.16 ENSMUST00000176720.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84246864_GATA/- chr1:84246864-84246867 - ENSMUSG00000045658.16 ENSMUST00000176822.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84246864_GATA/- chr1:84246864-84246867 - ENSMUSG00000045658.16 ENSMUST00000177458.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84451953_C/T chr1:84451953 T ENSMUSG00000036766.12 ENSMUST00000049126.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84469937_CTCT/- chr1:84469937-84469940 - ENSMUSG00000036766.12 ENSMUST00000049126.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84690894_AA/- chr1:84690894-84690895 - ENSMUSG00000036766.12 ENSMUST00000049126.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84690894_AA/- chr1:84690894-84690895 - ENSMUSG00000093254.1 ENSMUST00000175513.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4944;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84690894_AA/- chr1:84690894-84690895 - ENSMUSG00000036766.12 ENSMUST00000191306.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84856873_AA/-/AAA chr1:84856873-84856874 - ENSMUSG00000073633.9 ENSMUST00000097672.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84856873_AA/-/AAA chr1:84856873-84856874 AAA ENSMUSG00000073633.9 ENSMUST00000097672.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84856873_AA/-/AAA chr1:84856873-84856874 - ENSMUSG00000073633.9 ENSMUST00000143656.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_84856873_AA/-/AAA chr1:84856873-84856874 AAA ENSMUSG00000073633.9 ENSMUST00000143656.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85030273_T/C chr1:85030273 C ENSMUSG00000052477.15 ENSMUST00000159114.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85030273_T/C chr1:85030273 C ENSMUSG00000061852.8 ENSMUST00000160831.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097917_T/A chr1:85097917 A ENSMUSG00000073631.1 ENSMUST00000097669.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2247;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097917_T/A chr1:85097917 A ENSMUSG00000052477.15 ENSMUST00000159114.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097917_T/A chr1:85097917 A ENSMUSG00000089844.7 ENSMUST00000160792.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097917_T/A chr1:85097917 A ENSMUSG00000089844.7 ENSMUST00000161675.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1560;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097917_T/A chr1:85097917 A ENSMUSG00000089844.7 ENSMUST00000161724.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097933_G/A chr1:85097933 A ENSMUSG00000073631.1 ENSMUST00000097669.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2231;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097933_G/A chr1:85097933 A ENSMUSG00000052477.15 ENSMUST00000159114.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097933_G/A chr1:85097933 A ENSMUSG00000089844.7 ENSMUST00000160792.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097933_G/A chr1:85097933 A ENSMUSG00000089844.7 ENSMUST00000161675.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1544;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85097933_G/A chr1:85097933 A ENSMUSG00000089844.7 ENSMUST00000161724.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000052477.15 ENSMUST00000064341.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2127;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000052477.15 ENSMUST00000093506.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2150;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000079455.9 ENSMUST00000094774.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000052477.15 ENSMUST00000159582.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2550;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000079455.9 ENSMUST00000159695.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000079455.9 ENSMUST00000159849.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000052477.15 ENSMUST00000161267.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2515;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000079455.9 ENSMUST00000162652.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000079455.9 ENSMUST00000162923.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000079455.9 ENSMUST00000163068.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85272693_A/G chr1:85272693 G ENSMUSG00000091199.9 ENSMUST00000166777.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85337238_G/C chr1:85337238 C ENSMUSG00000089937.1 ENSMUST00000160010.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85337238_G/C chr1:85337238 C ENSMUSG00000089652.1 ENSMUST00000161923.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85492470_G/T chr1:85492470 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_85495238_A/T chr1:85495238 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_85495961_GAAGG/- chr1:85495961-85495965 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_85534599_C/T chr1:85534599 T ENSMUSG00000090186.5 ENSMUST00000160674.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85581691_CAT/- chr1:85581691-85581693 - ENSMUSG00000070034.13 ENSMUST00000093508.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85581691_CAT/- chr1:85581691-85581693 - ENSMUSG00000070034.13 ENSMUST00000128339.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85581691_CAT/- chr1:85581691-85581693 - ENSMUSG00000070034.13 ENSMUST00000131950.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85581691_CAT/- chr1:85581691-85581693 - ENSMUSG00000094127.1 ENSMUST00000178024.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4396;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85581691_CAT/- chr1:85581691-85581693 - ENSMUSG00000070034.13 ENSMUST00000186740.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85588903_G/A chr1:85588903 A ENSMUSG00000070034.13 ENSMUST00000093508.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85588903_G/A chr1:85588903 A ENSMUSG00000070034.13 ENSMUST00000128339.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85588903_G/A chr1:85588903 A ENSMUSG00000070034.13 ENSMUST00000131950.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85588903_G/A chr1:85588903 A ENSMUSG00000070034.13 ENSMUST00000143363.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4541;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85588903_G/A chr1:85588903 A ENSMUSG00000070034.13 ENSMUST00000186740.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4625;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000054279.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000066427.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000141998.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000145440.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000147552.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000150967.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000153574.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000026222.16 ENSMUST00000155094.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85651749_A/C chr1:85651749 C ENSMUSG00000090246.1 ENSMUST00000161540.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1164;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85898395_T/A chr1:85898395 A ENSMUSG00000026223.15 ENSMUST00000027425.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85898395_T/A chr1:85898395 A ENSMUSG00000026223.15 ENSMUST00000185569.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85925768_TCTTCT/- chr1:85925768-85925773 - ENSMUSG00000026224.11 ENSMUST00000027426.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2710;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85925768_TCTTCT/- chr1:85925768-85925773 - ENSMUSG00000026224.11 ENSMUST00000129392.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2954;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_85925768_TCTTCT/- chr1:85925768-85925773 - ENSMUSG00000026224.11 ENSMUST00000188949.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3113;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_86462958_G/A chr1:86462958 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_86777950_C/T chr1:86777950 T ENSMUSG00000053333.15 ENSMUST00000065694.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_86777950_C/T chr1:86777950 T ENSMUSG00000053333.15 ENSMUST00000168237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_86777950_C/T chr1:86777950 T ENSMUSG00000100768.1 ENSMUST00000186337.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1422;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_86777950_C/T chr1:86777950 T ENSMUSG00000053333.15 ENSMUST00000189044.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_86777950_C/T chr1:86777950 T ENSMUSG00000053333.15 ENSMUST00000190618.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87018432_-/TTTTTTTTTTTTTTTTTTTTTTTT chr1:87018431-87018432 TTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000053333.15 ENSMUST00000065694.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87018432_-/TTTTTTTTTTTTTTTTTTTTTTTT chr1:87018431-87018432 TTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000053333.15 ENSMUST00000168237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87018432_-/TTTTTTTTTTTTTTTTTTTTTTTT chr1:87018431-87018432 TTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000099401.1 ENSMUST00000185304.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87018432_-/TTTTTTTTTTTTTTTTTTTTTTTT chr1:87018431-87018432 TTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000053333.15 ENSMUST00000190618.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000026289.15 ENSMUST00000027512.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000026289.15 ENSMUST00000113186.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000026289.15 ENSMUST00000113190.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000026289.15 ENSMUST00000127884.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000026289.15 ENSMUST00000137638.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000026289.15 ENSMUST00000139628.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2898;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000026289.15 ENSMUST00000151037.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000087968.1 ENSMUST00000157343.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4647;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_87781856_G/A chr1:87781856 A ENSMUSG00000089281.1 ENSMUST00000158656.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2700;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000054545.17 ENSMUST00000014263.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090171.1 ENSMUST00000049289.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090124.7 ENSMUST00000058237.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000089960.1 ENSMUST00000073049.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1425;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090175.1 ENSMUST00000073772.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000089943.1 ENSMUST00000097659.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000054545.17 ENSMUST00000113134.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090124.7 ENSMUST00000113135.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090145.7 ENSMUST00000113137.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090145.7 ENSMUST00000113138.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000089675.1 ENSMUST00000113139.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090165.8 ENSMUST00000113142.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000081984.3 ENSMUST00000119972.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4752;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000054545.17 ENSMUST00000124852.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090124.7 ENSMUST00000126203.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090165.8 ENSMUST00000138182.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000054545.17 ENSMUST00000140092.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090124.7 ENSMUST00000150634.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000092220.1 ENSMUST00000173165.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000090165.8 ENSMUST00000173325.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88210534_G/A chr1:88210534 A ENSMUSG00000092220.1 ENSMUST00000174821.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1435;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88569553_ACACAC/-/ACAC chr1:88569553-88569558 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_88569553_ACACAC/-/ACAC chr1:88569553-88569558 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_88691351_TGTG/- chr1:88691351-88691354 - ENSMUSG00000049866.12 ENSMUST00000051236.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_88691351_TGTG/- chr1:88691351-88691354 - ENSMUSG00000049866.12 ENSMUST00000187810.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89260161_AGAG/-/AGAGAG chr1:89260161-89260164 - ENSMUSG00000102083.1 ENSMUST00000191231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3180;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89260161_AGAG/-/AGAGAG chr1:89260161-89260164 AGAGAG ENSMUSG00000102083.1 ENSMUST00000191231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3180;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89494663_GTGT/-/GTGTGT chr1:89494663-89494666 - ENSMUSG00000055013.15 ENSMUST00000027521.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89494663_GTGT/-/GTGTGT chr1:89494663-89494666 GTGTGT ENSMUSG00000055013.15 ENSMUST00000027521.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89494663_GTGT/-/GTGTGT chr1:89494663-89494666 - ENSMUSG00000055013.15 ENSMUST00000190096.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89494663_GTGT/-/GTGTGT chr1:89494663-89494666 GTGTGT ENSMUSG00000055013.15 ENSMUST00000190096.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89984332_AC/- chr1:89984332-89984333 - ENSMUSG00000067081.12 ENSMUST00000086882.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89984332_AC/- chr1:89984332-89984333 - ENSMUSG00000067081.12 ENSMUST00000097656.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89984332_AC/- chr1:89984332-89984333 - ENSMUSG00000067081.12 ENSMUST00000151330.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_89984332_AC/- chr1:89984332-89984333 - ENSMUSG00000067081.12 ENSMUST00000154228.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_90206524_TA/T/AA chr1:90206524-90206525 T ENSMUSG00000044337.5 ENSMUST00000065587.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_90206524_TA/T/AA chr1:90206524-90206525 AA ENSMUSG00000044337.5 ENSMUST00000065587.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_90206524_TA/T/AA chr1:90206524-90206525 T ENSMUSG00000044337.5 ENSMUST00000159654.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_90206524_TA/T/AA chr1:90206524-90206525 AA ENSMUSG00000044337.5 ENSMUST00000159654.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_90557728_ACAC/- chr1:90557728-90557731 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_90743448_ACAC/- chr1:90743448-90743451 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_91493526_GTGT/-/GT chr1:91493526-91493529 - ENSMUSG00000034292.13 ENSMUST00000047242.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1165;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91493526_GTGT/-/GT chr1:91493526-91493529 GT ENSMUSG00000034292.13 ENSMUST00000047242.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1165;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91493526_GTGT/-/GT chr1:91493526-91493529 - ENSMUSG00000101958.1 ENSMUST00000188924.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3517;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91493526_GTGT/-/GT chr1:91493526-91493529 GT ENSMUSG00000101958.1 ENSMUST00000188924.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3517;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91493526_GTGT/-/GT chr1:91493526-91493529 - ENSMUSG00000034292.13 ENSMUST00000189341.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1118;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91493526_GTGT/-/GT chr1:91493526-91493529 GT ENSMUSG00000034292.13 ENSMUST00000189341.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1118;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91613173_TT/-/TTT chr1:91613173-91613174 - ENSMUSG00000101705.1 ENSMUST00000188800.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91613173_TT/-/TTT chr1:91613173-91613174 TTT ENSMUSG00000101705.1 ENSMUST00000188800.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91735464_ACACAC/- chr1:91735464-91735469 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_91954497_GG/- chr1:91954497-91954498 - ENSMUSG00000026313.16 ENSMUST00000008995.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91954497_GG/- chr1:91954497-91954498 - ENSMUSG00000026313.16 ENSMUST00000097644.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91954497_GG/- chr1:91954497-91954498 - ENSMUSG00000026313.16 ENSMUST00000187308.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=876;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_91954497_GG/- chr1:91954497-91954498 - ENSMUSG00000026313.16 ENSMUST00000189303.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93093921_-/GATA chr1:93093920-93093921 GATA ENSMUSG00000014602.15 ENSMUST00000112958.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93093921_-/GATA chr1:93093920-93093921 GATA ENSMUSG00000014602.15 ENSMUST00000171556.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93093921_-/GATA chr1:93093920-93093921 GATA ENSMUSG00000014602.15 ENSMUST00000171796.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93093921_-/GATA chr1:93093920-93093921 GATA ENSMUSG00000014602.15 ENSMUST00000186861.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93093921_-/GATA chr1:93093920-93093921 GATA ENSMUSG00000014602.15 ENSMUST00000188493.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93093921_-/GATA chr1:93093920-93093921 GATA ENSMUSG00000014602.15 ENSMUST00000190723.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93710815_AAAA/- chr1:93710815-93710818 - ENSMUSG00000026279.14 ENSMUST00000112905.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93710815_AAAA/- chr1:93710815-93710818 - ENSMUSG00000026279.14 ENSMUST00000187445.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93710815_AAAA/- chr1:93710815-93710818 - ENSMUSG00000026279.14 ENSMUST00000189472.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3962;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93710815_AAAA/- chr1:93710815-93710818 - ENSMUSG00000026279.14 ENSMUST00000189728.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93710815_AAAA/- chr1:93710815-93710818 - ENSMUSG00000026279.14 ENSMUST00000190116.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_93983924_GAGA/- chr1:93983924-93983927 - ENSMUSG00000099624.1 ENSMUST00000185591.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_94260965_C/T chr1:94260965 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_95239152_A/T chr1:95239152 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_95455518_GTGT/-/GT chr1:95455518-95455521 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_95455518_GTGT/-/GT chr1:95455518-95455521 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_96106776_TT/-/T chr1:96106776-96106777 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_96106776_TT/-/T chr1:96106776-96106777 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_96282699_ACAC/-/AC chr1:96282699-96282702 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_96282699_ACAC/-/AC chr1:96282699-96282702 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_97778122_AGAG/- chr1:97778122-97778125 - ENSMUSG00000026333.14 ENSMUST00000027571.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97778122_AGAG/- chr1:97778122-97778125 - ENSMUSG00000026333.14 ENSMUST00000112842.7 Transcript 3_prime_UTR_variant 1020-1023 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97778122_AGAG/- chr1:97778122-97778125 - ENSMUSG00000026333.14 ENSMUST00000112844.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97778122_AGAG/- chr1:97778122-97778125 - ENSMUSG00000026333.14 ENSMUST00000138142.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97778122_AGAG/- chr1:97778122-97778125 - ENSMUSG00000026333.14 ENSMUST00000188101.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2082;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97778122_AGAG/- chr1:97778122-97778125 - ENSMUSG00000026333.14 ENSMUST00000189031.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97972216_CCTCT/- chr1:97972216-97972220 - ENSMUSG00000026335.16 ENSMUST00000058762.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97972216_CCTCT/- chr1:97972216-97972220 - ENSMUSG00000026335.16 ENSMUST00000097625.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97972216_CCTCT/- chr1:97972216-97972220 - ENSMUSG00000026335.16 ENSMUST00000159428.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97972216_CCTCT/- chr1:97972216-97972220 - ENSMUSG00000026335.16 ENSMUST00000161567.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_97972216_CCTCT/- chr1:97972216-97972220 - ENSMUSG00000026335.16 ENSMUST00000162426.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_98137293_TCTA/- chr1:98137293-98137296 - ENSMUSG00000100182.6 ENSMUST00000186473.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_98137293_TCTA/- chr1:98137293-98137296 - ENSMUSG00000100182.6 ENSMUST00000191060.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_98210681_AGAG/- chr1:98210681-98210684 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_98674157_ACAC/-/AC chr1:98674157-98674160 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_98674157_ACAC/-/AC chr1:98674157-98674160 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_99386305_TT/- chr1:99386305-99386306 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_99719452_GTGT/- chr1:99719452-99719455 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_99998189_CACA/-/CA chr1:99998189-99998192 - ENSMUSG00000067028.11 ENSMUST00000086738.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_99998189_CACA/-/CA chr1:99998189-99998192 CA ENSMUSG00000067028.11 ENSMUST00000086738.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100005922_CACA/-/CA chr1:100005922-100005925 - ENSMUSG00000067028.11 ENSMUST00000086738.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100005922_CACA/-/CA chr1:100005922-100005925 CA ENSMUSG00000067028.11 ENSMUST00000086738.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100005922_CACA/-/CA chr1:100005922-100005925 - ENSMUSG00000100662.1 ENSMUST00000189923.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=96;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100005922_CACA/-/CA chr1:100005922-100005925 CA ENSMUSG00000100662.1 ENSMUST00000189923.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=96;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100466329_GTGT/-/GT/GTGTGT chr1:100466329-100466332 - ENSMUSG00000067028.11 ENSMUST00000086738.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100466329_GTGT/-/GT/GTGTGT chr1:100466329-100466332 GT ENSMUSG00000067028.11 ENSMUST00000086738.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100466329_GTGT/-/GT/GTGTGT chr1:100466329-100466332 GTGTGT ENSMUSG00000067028.11 ENSMUST00000086738.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100466329_GTGT/-/GT/GTGTGT chr1:100466329-100466332 - ENSMUSG00000067028.11 ENSMUST00000188735.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100466329_GTGT/-/GT/GTGTGT chr1:100466329-100466332 GT ENSMUSG00000067028.11 ENSMUST00000188735.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100466329_GTGT/-/GT/GTGTGT chr1:100466329-100466332 GTGTGT ENSMUSG00000067028.11 ENSMUST00000188735.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_100863108_-/T chr1:100863107-100863108 T ENSMUSG00000077039.1 ENSMUST00000103851.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1206;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_101409033_-/TG chr1:101409032-101409033 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_101438503_ATAT/-/AT/ATATAT chr1:101438503-101438506 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_101438503_ATAT/-/AT/ATATAT chr1:101438503-101438506 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_101438503_ATAT/-/AT/ATATAT chr1:101438503-101438506 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_101481265_C/T chr1:101481265 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_102622406_CACA/-/CA chr1:102622406-102622409 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_102622406_CACA/-/CA chr1:102622406-102622409 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_103167771_CAAA/C/AAAA chr1:103167771-103167774 C ENSMUSG00000100955.1 ENSMUST00000186155.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4152;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_103167771_CAAA/C/AAAA chr1:103167771-103167774 AAAA ENSMUSG00000100955.1 ENSMUST00000186155.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4152;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_103419455_C/T chr1:103419455 T ENSMUSG00000099469.1 ENSMUST00000190357.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_103824170_-/ACAA chr1:103824169-103824170 ACAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_104496717_G/T chr1:104496717 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_104674752_-/TGTGTGTGTGTGTG chr1:104674751-104674752 TGTGTGTGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_105701227_TCTC/- chr1:105701227-105701230 - ENSMUSG00000026319.13 ENSMUST00000039173.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105701227_TCTC/- chr1:105701227-105701230 - ENSMUSG00000026319.13 ENSMUST00000086721.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105701227_TCTC/- chr1:105701227-105701230 - ENSMUSG00000026319.13 ENSMUST00000185692.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105701227_TCTC/- chr1:105701227-105701230 - ENSMUSG00000026319.13 ENSMUST00000186807.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105701227_TCTC/- chr1:105701227-105701230 - ENSMUSG00000026319.13 ENSMUST00000188969.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2529;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105701227_TCTC/- chr1:105701227-105701230 - ENSMUSG00000026319.13 ENSMUST00000190501.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105701227_TCTC/- chr1:105701227-105701230 - ENSMUSG00000026319.13 ENSMUST00000191293.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105825824_ACAC/- chr1:105825824-105825827 - ENSMUSG00000026321.7 ENSMUST00000027559.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_105825824_ACAC/- chr1:105825824-105825827 - ENSMUSG00000026321.7 ENSMUST00000187658.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=423;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_106832520_CTCT/- chr1:106832520-106832523 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_107650999_T/C chr1:107650999 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108338886_TGTG/-/TG chr1:108338886-108338889 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108338886_TGTG/-/TG chr1:108338886-108338889 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108640146_AA/-/AAA chr1:108640146-108640147 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108640146_AA/-/AAA chr1:108640146-108640147 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108708587_TT/- chr1:108708587-108708588 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108715459_TT/-/T/TTTT chr1:108715459-108715460 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108715459_TT/-/T/TTTT chr1:108715459-108715460 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108715459_TT/-/T/TTTT chr1:108715459-108715460 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_108973839_G/C chr1:108973839 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_109522568_TT/- chr1:109522568-109522569 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_109655231_AGAG/- chr1:109655231-109655234 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_109669720_A/-/AA chr1:109669720 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_109669720_A/-/AA chr1:109669720 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_110131387_CA/C/AA chr1:110131387-110131388 C ENSMUSG00000026312.17 ENSMUST00000027542.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 AA ENSMUSG00000026312.17 ENSMUST00000027542.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 C ENSMUSG00000026312.17 ENSMUST00000112701.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 AA ENSMUSG00000026312.17 ENSMUST00000112701.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 C ENSMUSG00000026312.17 ENSMUST00000131464.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 AA ENSMUSG00000026312.17 ENSMUST00000131464.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 C ENSMUSG00000026312.17 ENSMUST00000134301.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 AA ENSMUSG00000026312.17 ENSMUST00000134301.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 C ENSMUSG00000026312.17 ENSMUST00000172005.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110131387_CA/C/AA chr1:110131387-110131388 AA ENSMUSG00000026312.17 ENSMUST00000172005.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_110374219_AGAG/- chr1:110374219-110374222 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_110417427_AAAG/- chr1:110417427-110417430 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_111375336_GG/- chr1:111375336-111375337 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_111580912_C/T chr1:111580912 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_112226040_AA/-/AAA chr1:112226040-112226041 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_112226040_AA/-/AAA chr1:112226040-112226041 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_113100795_TGTG/- chr1:113100795-113100798 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_113248367_AAAA/- chr1:113248367-113248370 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_113299052_CTCT/- chr1:113299052-113299055 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_114294320_TGTG/-/TGTGTGTG chr1:114294320-114294323 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_114294320_TGTG/-/TGTGTGTG chr1:114294320-114294323 TGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_114934945_GATA/- chr1:114934945-114934948 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_115447314_C/T chr1:115447314 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_115463136_AA/-/A chr1:115463136-115463137 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_115463136_AA/-/A chr1:115463136-115463137 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_116036923_T/C chr1:116036923 C ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_116065744_C/T chr1:116065744 T ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_116120761_TCTC/- chr1:116120761-116120764 - ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_116121126_GT/- chr1:116121126-116121127 - ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_116246124_T/C chr1:116246124 C ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_116435455_ATAT/-/ATATAT chr1:116435455-116435458 - ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_116435455_ATAT/-/ATATAT chr1:116435455-116435458 ATATAT ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_116530817_C/T chr1:116530817 T ENSMUSG00000070695.4 ENSMUST00000043725.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_117973253_TT/- chr1:117973253-117973254 - ENSMUSG00000100617.1 ENSMUST00000185381.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119357304_AA/- chr1:119357304-119357305 - ENSMUSG00000101179.1 ENSMUST00000186504.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119368046_-/GTGT chr1:119368045-119368046 GTGT ENSMUSG00000101179.1 ENSMUST00000186504.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119376163_TTT/- chr1:119376163-119376165 - ENSMUSG00000101179.1 ENSMUST00000186504.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119821722_-/TAGA chr1:119821721-119821722 TAGA ENSMUSG00000026384.13 ENSMUST00000064091.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119821722_-/TAGA chr1:119821721-119821722 TAGA ENSMUSG00000026384.13 ENSMUST00000163435.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119821722_-/TAGA chr1:119821721-119821722 TAGA ENSMUSG00000026384.13 ENSMUST00000163621.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119821722_-/TAGA chr1:119821721-119821722 TAGA ENSMUSG00000090277.1 ENSMUST00000163928.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3596;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119821722_-/TAGA chr1:119821721-119821722 TAGA ENSMUSG00000026384.13 ENSMUST00000166422.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_119821722_-/TAGA chr1:119821721-119821722 TAGA ENSMUSG00000026384.13 ENSMUST00000168303.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_120418815_AAA/-/A/AAAA chr1:120418815-120418817 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_120418815_AAA/-/A/AAAA chr1:120418815-120418817 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_120418815_AAA/-/A/AAAA chr1:120418815-120418817 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_121289466_-/AGAT chr1:121289465-121289466 AGAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000003818.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1243;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000003818.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1243;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000071064.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2412;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000071064.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2412;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000159085.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2445;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000159085.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2445;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000159192.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3770;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000159192.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3770;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000159528.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000159528.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000160688.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2814;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000160688.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2814;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000160968.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2428;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000160968.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2428;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000162582.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3827;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000162582.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3827;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000162790.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4127;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000162790.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4127;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000003721.14 ENSMUST00000186915.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000003721.14 ENSMUST00000186915.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 - ENSMUSG00000104332.1 ENSMUST00000193041.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2279;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303110_C/-/ACC chr1:121303110 ACC ENSMUSG00000104332.1 ENSMUST00000193041.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2279;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000003818.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1233;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000071064.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2402;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000159085.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2435;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000159192.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3760;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000159528.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000160688.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2804;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000160968.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2418;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000162582.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3817;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000162790.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4117;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000003721.14 ENSMUST00000186915.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2575;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121303120_T/C chr1:121303120 C ENSMUSG00000104332.1 ENSMUST00000193041.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2289;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121430698_AAAA/- chr1:121430698-121430701 - ENSMUSG00000026339.18 ENSMUST00000036025.15 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=348;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121430698_AAAA/- chr1:121430698-121430701 - ENSMUSG00000026339.18 ENSMUST00000112621.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=409;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121430698_AAAA/- chr1:121430698-121430701 - ENSMUSG00000026339.18 ENSMUST00000128924.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=407;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121430698_AAAA/- chr1:121430698-121430701 - ENSMUSG00000026339.18 ENSMUST00000155673.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=394;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_121430698_AAAA/- chr1:121430698-121430701 - ENSMUSG00000026339.18 ENSMUST00000156459.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=374;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_122186504_ACAC/- chr1:122186504-122186507 - ENSMUSG00000100913.1 ENSMUST00000185647.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3714;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_122578997_ATAT/- chr1:122578997-122579000 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_123291445_GAGA/- chr1:123291445-123291448 - ENSMUSG00000101495.1 ENSMUST00000189001.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3638;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_123329453_-/CA chr1:123329452-123329453 CA ENSMUSG00000036815.16 ENSMUST00000112603.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2689;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_123329453_-/CA chr1:123329452-123329453 CA ENSMUSG00000036815.16 ENSMUST00000112606.7 Transcript 3_prime_UTR_variant 7315-7316 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_123467302_-/TGTGTGTGTG chr1:123467301-123467302 TGTGTGTGTG ENSMUSG00000036815.16 ENSMUST00000112603.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_123467302_-/TGTGTGTGTG chr1:123467301-123467302 TGTGTGTGTG ENSMUSG00000036815.16 ENSMUST00000112606.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_123467302_-/TGTGTGTGTG chr1:123467301-123467302 TGTGTGTGTG ENSMUSG00000104205.1 ENSMUST00000191827.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1148;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_123586740_TATA/- chr1:123586740-123586743 - ENSMUSG00000036815.16 ENSMUST00000112603.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_123586740_TATA/- chr1:123586740-123586743 - ENSMUSG00000036815.16 ENSMUST00000112606.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_124522560_AGAGAAG/- chr1:124522560-124522566 - ENSMUSG00000100851.1 ENSMUST00000187286.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_124702054_T/C chr1:124702054 C ENSMUSG00000100851.1 ENSMUST00000187286.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 G ENSMUSG00000049690.15 ENSMUST00000057846.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 CAC ENSMUSG00000049690.15 ENSMUST00000057846.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 G ENSMUSG00000049690.15 ENSMUST00000094609.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 CAC ENSMUSG00000049690.15 ENSMUST00000094609.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 G ENSMUSG00000049690.15 ENSMUST00000112583.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 CAC ENSMUSG00000049690.15 ENSMUST00000112583.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 G ENSMUSG00000049690.15 ENSMUST00000161954.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 CAC ENSMUSG00000049690.15 ENSMUST00000161954.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 G ENSMUSG00000049690.15 ENSMUST00000162877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126082321_GAC/G/CAC chr1:126082321-126082323 CAC ENSMUSG00000049690.15 ENSMUST00000162877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126212082_AG/CC chr1:126212082-126212083 CC ENSMUSG00000049690.15 ENSMUST00000057846.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126212082_AG/CC chr1:126212082-126212083 CC ENSMUSG00000049690.15 ENSMUST00000094609.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126212082_AG/CC chr1:126212082-126212083 CC ENSMUSG00000049690.15 ENSMUST00000112583.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126212082_AG/CC chr1:126212082-126212083 CC ENSMUSG00000049690.15 ENSMUST00000161954.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126212082_AG/CC chr1:126212082-126212083 CC ENSMUSG00000049690.15 ENSMUST00000162877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126753902_TCA/- chr1:126753902-126753904 - ENSMUSG00000049690.15 ENSMUST00000094609.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126753902_TCA/- chr1:126753902-126753904 - ENSMUSG00000049690.15 ENSMUST00000112583.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126753902_TCA/- chr1:126753902-126753904 - ENSMUSG00000049690.15 ENSMUST00000162646.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126753902_TCA/- chr1:126753902-126753904 - ENSMUSG00000049690.15 ENSMUST00000162647.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_126910798_TGTG/- chr1:126910798-126910801 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_127593303_T/A chr1:127593303 A ENSMUSG00000026347.13 ENSMUST00000027585.13 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_127593303_T/A chr1:127593303 A ENSMUSG00000026347.13 ENSMUST00000160616.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_127593303_T/A chr1:127593303 A ENSMUSG00000026347.13 ENSMUST00000185560.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_127593660_C/A chr1:127593660 A ENSMUSG00000026347.13 ENSMUST00000027585.13 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_127593660_C/A chr1:127593660 A ENSMUSG00000026347.13 ENSMUST00000160616.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_127593660_C/A chr1:127593660 A ENSMUSG00000026347.13 ENSMUST00000185560.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128262772_TT/-/T chr1:128262772-128262773 - ENSMUSG00000026353.9 ENSMUST00000027592.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128262772_TT/-/T chr1:128262772-128262773 T ENSMUSG00000026353.9 ENSMUST00000027592.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128262772_TT/-/T chr1:128262772-128262773 - ENSMUSG00000026353.9 ENSMUST00000187031.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128262772_TT/-/T chr1:128262772-128262773 T ENSMUSG00000026353.9 ENSMUST00000187031.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128262772_TT/-/T chr1:128262772-128262773 - ENSMUSG00000026353.9 ENSMUST00000190736.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3237;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128262772_TT/-/T chr1:128262772-128262773 T ENSMUSG00000026353.9 ENSMUST00000190736.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3237;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128482065_-/ATT chr1:128482064-128482065 ATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_128514939_TT/-/T chr1:128514939-128514940 - ENSMUSG00000088432.1 ENSMUST00000157807.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=175;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128514939_TT/-/T chr1:128514939-128514940 T ENSMUSG00000088432.1 ENSMUST00000157807.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=175;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128514939_TT/-/T chr1:128514939-128514940 - ENSMUSG00000100941.1 ENSMUST00000188035.1 Transcript non_coding_transcript_exon_variant 178-179 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_128514939_TT/-/T chr1:128514939-128514940 T ENSMUSG00000100941.1 ENSMUST00000188035.1 Transcript non_coding_transcript_exon_variant 178-179 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_129179910_TGTG/- chr1:129179910-129179913 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_130130386_AAAAA/- chr1:130130386-130130390 - ENSMUSG00000042581.14 ENSMUST00000073527.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130130386_AAAAA/- chr1:130130386-130130390 - ENSMUSG00000042581.14 ENSMUST00000151700.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130475314_AA/- chr1:130475314-130475315 - ENSMUSG00000085526.1 ENSMUST00000125681.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130475314_AA/- chr1:130475314-130475315 - ENSMUSG00000103751.1 ENSMUST00000193111.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130643797_GTGT/- chr1:130643797-130643800 - ENSMUSG00000026405.14 ENSMUST00000027657.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130643797_GTGT/- chr1:130643797-130643800 - ENSMUSG00000026405.14 ENSMUST00000137276.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130643797_GTGT/- chr1:130643797-130643800 - ENSMUSG00000026405.14 ENSMUST00000171642.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130763149_AGAG/- chr1:130763149-130763152 - ENSMUSG00000100106.1 ENSMUST00000189150.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3232;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_130961497_TCTAT/- chr1:130961497-130961501 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_132757321_A/G chr1:132757321 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_133070478_TGTG/- chr1:133070478-133070481 - ENSMUSG00000026447.16 ENSMUST00000077730.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133070478_TGTG/- chr1:133070478-133070481 - ENSMUSG00000026447.16 ENSMUST00000124934.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133070478_TGTG/- chr1:133070478-133070481 - ENSMUSG00000026447.16 ENSMUST00000145153.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2445;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133070478_TGTG/- chr1:133070478-133070481 - ENSMUSG00000026447.16 ENSMUST00000153707.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3249;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133070478_TGTG/- chr1:133070478-133070481 - ENSMUSG00000101102.1 ENSMUST00000186515.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2073;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133427898_AGAG/-/AG chr1:133427898-133427901 - ENSMUSG00000070643.11 ENSMUST00000153799.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3521;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133427898_AGAG/-/AG chr1:133427898-133427901 AG ENSMUSG00000070643.11 ENSMUST00000153799.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3521;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133550900_C/T chr1:133550900 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_133830197_TATT/- chr1:133830197-133830200 - ENSMUSG00000100830.1 ENSMUST00000190927.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4989;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_133830197_TATT/- chr1:133830197-133830200 - ENSMUSG00000103166.1 ENSMUST00000192625.1 Transcript non_coding_transcript_exon_variant 670-673 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134199149_ACAC/- chr1:134199149-134199152 - ENSMUSG00000042429.8 ENSMUST00000038191.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2197;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134199149_ACAC/- chr1:134199149-134199152 - ENSMUSG00000042451.12 ENSMUST00000038445.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134199149_ACAC/- chr1:134199149-134199152 - ENSMUSG00000042429.8 ENSMUST00000086465.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=73;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134199149_ACAC/- chr1:134199149-134199152 - ENSMUSG00000042429.8 ENSMUST00000169927.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=71;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134199149_ACAC/- chr1:134199149-134199152 - ENSMUSG00000042429.8 ENSMUST00000187631.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4245;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134199149_ACAC/- chr1:134199149-134199152 - ENSMUSG00000042451.12 ENSMUST00000191577.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134673281_A/T chr1:134673281 T ENSMUSG00000026452.15 ENSMUST00000187725.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134673281_A/T chr1:134673281 T ENSMUSG00000026452.15 ENSMUST00000188842.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134921040_ACAC/- chr1:134921040-134921043 - ENSMUSG00000073557.11 ENSMUST00000045665.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134921040_ACAC/- chr1:134921040-134921043 - ENSMUSG00000073557.11 ENSMUST00000086444.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134921040_ACAC/- chr1:134921040-134921043 - ENSMUSG00000073557.11 ENSMUST00000132025.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_134921040_ACAC/- chr1:134921040-134921043 - ENSMUSG00000073557.11 ENSMUST00000168381.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135007537_TT/- chr1:135007537-135007538 - ENSMUSG00000042793.13 ENSMUST00000044828.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135007537_TT/- chr1:135007537-135007538 - ENSMUSG00000042793.13 ENSMUST00000137968.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135007537_TT/- chr1:135007537-135007538 - ENSMUSG00000042793.13 ENSMUST00000139369.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135037312_TGTGTG/- chr1:135037312-135037317 - ENSMUSG00000042793.13 ENSMUST00000044828.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135071010_AA/- chr1:135071010-135071011 - ENSMUSG00000042793.13 ENSMUST00000044828.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135223993_-/ACAT chr1:135223992-135223993 ACAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_135606432_T/- chr1:135606432 - ENSMUSG00000090399.1 ENSMUST00000112103.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=15;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135606432_T/- chr1:135606432 - ENSMUSG00000009418.15 ENSMUST00000190298.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_135663827_-/ACAAA chr1:135663826-135663827 ACAAA ENSMUSG00000090399.1 ENSMUST00000112103.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 - ENSMUSG00000026398.14 ENSMUST00000027649.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 ACACACACACAC ENSMUSG00000026398.14 ENSMUST00000027649.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 - ENSMUSG00000026398.14 ENSMUST00000168126.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 ACACACACACAC ENSMUSG00000026398.14 ENSMUST00000168126.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 - ENSMUSG00000026398.14 ENSMUST00000192357.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 ACACACACACAC ENSMUSG00000026398.14 ENSMUST00000192357.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 - ENSMUSG00000026398.14 ENSMUST00000192587.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 ACACACACACAC ENSMUSG00000026398.14 ENSMUST00000192587.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 - ENSMUSG00000026398.14 ENSMUST00000192929.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_136907763_ACAC/-/ACACACACACAC chr1:136907763-136907766 ACACACACACAC ENSMUSG00000026398.14 ENSMUST00000192929.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_137350356_A/G chr1:137350356 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_137970112_-/GAAA chr1:137970111-137970112 GAAA ENSMUSG00000065458.1 ENSMUST00000083524.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3393;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_137970112_-/GAAA chr1:137970111-137970112 GAAA ENSMUSG00000065565.1 ENSMUST00000083631.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3570;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_137970112_-/GAAA chr1:137970111-137970112 GAAA ENSMUSG00000098243.3 ENSMUST00000182127.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_137970112_-/GAAA chr1:137970111-137970112 GAAA ENSMUSG00000098206.1 ENSMUST00000182158.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=193;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_137970112_-/GAAA chr1:137970111-137970112 GAAA ENSMUSG00000098145.1 ENSMUST00000182424.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=871;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_137970112_-/GAAA chr1:137970111-137970112 GAAA ENSMUSG00000098145.1 ENSMUST00000182680.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=896;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_137970112_-/GAAA chr1:137970111-137970112 GAAA ENSMUSG00000104197.1 ENSMUST00000191811.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1062;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138597978_TG/- chr1:138597978-138597979 - ENSMUSG00000026393.10 ENSMUST00000027642.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138597978_TG/- chr1:138597978-138597979 - ENSMUSG00000026393.10 ENSMUST00000186017.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138597978_TG/- chr1:138597978-138597979 - ENSMUSG00000026393.10 ENSMUST00000187407.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138597978_TG/- chr1:138597978-138597979 - ENSMUSG00000026393.10 ENSMUST00000191549.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138776564_AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr1:138776564-138776599 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_138877324_GAGA/-/GA chr1:138877324-138877327 - ENSMUSG00000065275.1 ENSMUST00000083341.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=935;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138877324_GAGA/-/GA chr1:138877324-138877327 GA ENSMUSG00000065275.1 ENSMUST00000083341.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=935;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138877324_GAGA/-/GA chr1:138877324-138877327 - ENSMUSG00000099808.2 ENSMUST00000186955.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=373;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138877324_GAGA/-/GA chr1:138877324-138877327 GA ENSMUSG00000099808.2 ENSMUST00000186955.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=373;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_138933396_AA/- chr1:138933396-138933397 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_139428654_AA/- chr1:139428654-139428655 - ENSMUSG00000033964.12 ENSMUST00000039867.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_139428654_AA/- chr1:139428654-139428655 - ENSMUSG00000033964.12 ENSMUST00000199011.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_139428654_AA/- chr1:139428654-139428655 - ENSMUSG00000033964.12 ENSMUST00000200243.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_139896026_AAA/- chr1:139896026-139896028 - ENSMUSG00000089991.2 ENSMUST00000134229.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_140235182_TT/-/TTT chr1:140235182-140235183 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_140235182_TT/-/TTT chr1:140235182-140235183 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_140923919_C/T chr1:140923919 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_140994999_ACAC/-/AC chr1:140994999-140995002 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_140994999_ACAC/-/AC chr1:140994999-140995002 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_141152597_T/C chr1:141152597 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_141152601_T/C chr1:141152601 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_141866646_TCTCTC/- chr1:141866646-141866651 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_142494412_A/T chr1:142494412 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_142500720_G/T chr1:142500720 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_144685330_-/TCTC chr1:144685329-144685330 TCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_146100519_TTCT/- chr1:146100519-146100522 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_146900778_A/C chr1:146900778 C ENSMUSG00000035131.14 ENSMUST00000074622.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_146900778_A/C chr1:146900778 C ENSMUSG00000035131.14 ENSMUST00000128345.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_146900778_A/C chr1:146900778 C ENSMUSG00000035131.14 ENSMUST00000166814.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_147671348_G/A chr1:147671348 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_147671362_G/C chr1:147671362 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_147925950_G/A chr1:147925950 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_148180586_-/TATATA chr1:148180585-148180586 TATATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_148573811_T/A chr1:148573811 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_148753766_G/T chr1:148753766 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_148848602_TATA/- chr1:148848602-148848605 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_149041931_GAGAGA/- chr1:149041931-149041936 - ENSMUSG00000100917.1 ENSMUST00000185777.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2335;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_149663143_C/T chr1:149663143 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_151103894_C/A chr1:151103894 A ENSMUSG00000100595.1 ENSMUST00000191430.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4021;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151251345_CTCT/- chr1:151251345-151251348 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_151384621_TT/- chr1:151384621-151384622 - ENSMUSG00000052748.14 ENSMUST00000064771.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151384621_TT/- chr1:151384621-151384622 - ENSMUSG00000052748.14 ENSMUST00000111883.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151384621_TT/- chr1:151384621-151384622 - ENSMUSG00000052748.14 ENSMUST00000139244.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=105;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151859233_G/T chr1:151859233 T ENSMUSG00000084557.1 ENSMUST00000122608.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4278;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151859233_G/T chr1:151859233 T ENSMUSG00000032666.16 ENSMUST00000187603.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151944808_GTGT/- chr1:151944808-151944811 - ENSMUSG00000032666.16 ENSMUST00000044581.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151944808_GTGT/- chr1:151944808-151944811 - ENSMUSG00000032666.16 ENSMUST00000121533.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_151944808_GTGT/- chr1:151944808-151944811 - ENSMUSG00000032666.16 ENSMUST00000187603.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153068472_-/CACA chr1:153068471-153068472 CACA ENSMUSG00000042751.14 ENSMUST00000043313.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153068472_-/CACA chr1:153068471-153068472 CACA ENSMUSG00000042751.14 ENSMUST00000185241.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153068472_-/CACA chr1:153068471-153068472 CACA ENSMUSG00000042751.14 ENSMUST00000186368.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153068472_-/CACA chr1:153068471-153068472 CACA ENSMUSG00000042751.14 ENSMUST00000186621.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153068472_-/CACA chr1:153068471-153068472 CACA ENSMUSG00000042751.14 ENSMUST00000187569.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153068472_-/CACA chr1:153068471-153068472 CACA ENSMUSG00000099969.1 ENSMUST00000190117.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153268739_GTGT/-/GT chr1:153268739-153268742 - ENSMUSG00000026478.14 ENSMUST00000027752.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153268739_GTGT/-/GT chr1:153268739-153268742 GT ENSMUSG00000026478.14 ENSMUST00000027752.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153406051_T/G chr1:153406051 G ENSMUSG00000073538.10 ENSMUST00000097535.10 Transcript non_coding_transcript_exon_variant 732 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153406051_T/G chr1:153406051 G ENSMUSG00000073538.10 ENSMUST00000186785.6 Transcript non_coding_transcript_exon_variant 740 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153406051_T/G chr1:153406051 G ENSMUSG00000073538.10 ENSMUST00000188717.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=196;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_153594452_GAGAGAGA/-/GAGAGA chr1:153594452-153594459 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_153594452_GAGAGAGA/-/GAGAGA chr1:153594452-153594459 GAGAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_154729989_ACAC/-/AC chr1:154729989-154729992 - ENSMUSG00000004110.16 ENSMUST00000004214.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4069;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 AC ENSMUSG00000004110.16 ENSMUST00000004214.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4069;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 - ENSMUSG00000004110.16 ENSMUST00000187541.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3633;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 AC ENSMUSG00000004110.16 ENSMUST00000187541.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3633;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 - ENSMUSG00000004110.16 ENSMUST00000188321.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 AC ENSMUSG00000004110.16 ENSMUST00000188321.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 - ENSMUSG00000004110.16 ENSMUST00000188965.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 AC ENSMUSG00000004110.16 ENSMUST00000188965.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 - ENSMUSG00000004110.16 ENSMUST00000211821.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_154729989_ACAC/-/AC chr1:154729989-154729992 AC ENSMUSG00000004110.16 ENSMUST00000211821.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_156430036_AA/- chr1:156430036-156430037 - ENSMUSG00000026600.12 ENSMUST00000051396.12 Transcript 3_prime_UTR_variant 2681-2682 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_156430036_AA/- chr1:156430036-156430037 - ENSMUSG00000026600.12 ENSMUST00000186420.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=688;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_156430036_AA/- chr1:156430036-156430037 - ENSMUSG00000026600.12 ENSMUST00000187987.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=946;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_156430036_AA/- chr1:156430036-156430037 - ENSMUSG00000026600.12 ENSMUST00000189661.6 Transcript 3_prime_UTR_variant 2859-2860 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_156525595_TT/- chr1:156525595-156525596 - ENSMUSG00000101523.1 ENSMUST00000190422.1 Transcript 3_prime_UTR_variant 1584-1585 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_156764074_GTGT/- chr1:156764074-156764077 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_157002001_TT/-/TTT chr1:157002001-157002002 - ENSMUSG00000101768.1 ENSMUST00000190681.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157002001_TT/-/TTT chr1:157002001-157002002 TTT ENSMUSG00000101768.1 ENSMUST00000190681.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157312230_AAAA/-/AA chr1:157312230-157312233 - ENSMUSG00000070565.11 ENSMUST00000078308.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157312230_AAAA/-/AA chr1:157312230-157312233 AA ENSMUSG00000070565.11 ENSMUST00000078308.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157312230_AAAA/-/AA chr1:157312230-157312233 - ENSMUSG00000070565.11 ENSMUST00000132699.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157312230_AAAA/-/AA chr1:157312230-157312233 AA ENSMUSG00000070565.11 ENSMUST00000132699.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157312230_AAAA/-/AA chr1:157312230-157312233 - ENSMUSG00000070565.11 ENSMUST00000143080.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157312230_AAAA/-/AA chr1:157312230-157312233 AA ENSMUSG00000070565.11 ENSMUST00000143080.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157403801_A/- chr1:157403801 - ENSMUSG00000070565.11 ENSMUST00000078308.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157403801_A/- chr1:157403801 - ENSMUSG00000070565.11 ENSMUST00000132699.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157403801_A/- chr1:157403801 - ENSMUSG00000070565.11 ENSMUST00000143080.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157403801_A/- chr1:157403801 - ENSMUSG00000103808.1 ENSMUST00000194997.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=524;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157420967_G/A chr1:157420967 A ENSMUSG00000049881.13 ENSMUST00000061537.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=731;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157420967_G/A chr1:157420967 A ENSMUSG00000049881.13 ENSMUST00000187761.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=734;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157420967_G/A chr1:157420967 A ENSMUSG00000049881.13 ENSMUST00000189791.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=815;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157420980_G/C chr1:157420980 C ENSMUSG00000049881.13 ENSMUST00000061537.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=744;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157420980_G/C chr1:157420980 C ENSMUSG00000049881.13 ENSMUST00000187761.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=747;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_157420980_G/C chr1:157420980 C ENSMUSG00000049881.13 ENSMUST00000189791.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=828;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158078201_T/G chr1:158078201 G ENSMUSG00000102789.1 ENSMUST00000192097.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 - ENSMUSG00000026587.15 ENSMUST00000046110.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GT ENSMUSG00000026587.15 ENSMUST00000046110.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GTGTGT ENSMUSG00000026587.15 ENSMUST00000046110.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 - ENSMUSG00000026587.15 ENSMUST00000170718.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GT ENSMUSG00000026587.15 ENSMUST00000170718.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GTGTGT ENSMUSG00000026587.15 ENSMUST00000170718.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 - ENSMUSG00000103971.1 ENSMUST00000192868.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GT ENSMUSG00000103971.1 ENSMUST00000192868.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GTGTGT ENSMUSG00000103971.1 ENSMUST00000192868.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 - ENSMUSG00000026587.15 ENSMUST00000193042.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GT ENSMUSG00000026587.15 ENSMUST00000193042.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GTGTGT ENSMUSG00000026587.15 ENSMUST00000193042.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 - ENSMUSG00000026587.15 ENSMUST00000194369.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GT ENSMUSG00000026587.15 ENSMUST00000194369.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GTGTGT ENSMUSG00000026587.15 ENSMUST00000194369.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 - ENSMUSG00000026587.15 ENSMUST00000195311.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GT ENSMUSG00000026587.15 ENSMUST00000195311.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158528315_GTGT/-/GT/GTGTGT chr1:158528315-158528318 GTGTGT ENSMUSG00000026587.15 ENSMUST00000195311.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_158888494_G/T chr1:158888494 T ENSMUSG00000073530.11 ENSMUST00000159861.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159530342_A/- chr1:159530342 - ENSMUSG00000015829.13 ENSMUST00000192069.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159530342_A/- chr1:159530342 - ENSMUSG00000015829.13 ENSMUST00000195199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159551254_G/T chr1:159551254 T ENSMUSG00000015829.13 ENSMUST00000192069.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159551254_G/T chr1:159551254 T ENSMUSG00000015829.13 ENSMUST00000195199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159870022_GTGT/-/GT chr1:159870022-159870025 - ENSMUSG00000015829.13 ENSMUST00000111669.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159870022_GTGT/-/GT chr1:159870022-159870025 GT ENSMUSG00000015829.13 ENSMUST00000111669.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159870022_GTGT/-/GT chr1:159870022-159870025 - ENSMUSG00000015829.13 ENSMUST00000192069.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_159870022_GTGT/-/GT chr1:159870022-159870025 GT ENSMUSG00000015829.13 ENSMUST00000192069.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160000080_TCTCTC/-/TCTCTCTC chr1:160000080-160000085 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_160000080_TCTCTC/-/TCTCTCTC chr1:160000080-160000085 TCTCTCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_160144233_GTGT/- chr1:160144233-160144236 - ENSMUSG00000026725.17 ENSMUST00000039178.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160144233_GTGT/- chr1:160144233-160144236 - ENSMUSG00000026725.17 ENSMUST00000131919.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160396579_GAGA/- chr1:160396579-160396582 - ENSMUSG00000026721.16 ENSMUST00000028049.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160396579_GAGA/- chr1:160396579-160396582 - ENSMUSG00000026721.16 ENSMUST00000191651.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160396579_GAGA/- chr1:160396579-160396582 - ENSMUSG00000104302.1 ENSMUST00000194105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160396579_GAGA/- chr1:160396579-160396582 - ENSMUSG00000026721.16 ENSMUST00000235109.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160905561_AAAA/-/AAAAA chr1:160905561-160905564 - ENSMUSG00000040423.10 ENSMUST00000161609.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=854;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_160905561_AAAA/-/AAAAA chr1:160905561-160905564 AAAAA ENSMUSG00000040423.10 ENSMUST00000161609.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=854;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_161334876_C/A chr1:161334876 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_161917983_ACAC/-/AC chr1:161917983-161917986 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_161917983_ACAC/-/AC chr1:161917983-161917986 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_162125733_GTGT/- chr1:162125733-162125736 - ENSMUSG00000040265.16 ENSMUST00000070330.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162125733_GTGT/- chr1:162125733-162125736 - ENSMUSG00000040265.16 ENSMUST00000086074.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162125733_GTGT/- chr1:162125733-162125736 - ENSMUSG00000040265.16 ENSMUST00000159763.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162125733_GTGT/- chr1:162125733-162125736 - ENSMUSG00000040265.16 ENSMUST00000160665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162125733_GTGT/- chr1:162125733-162125736 - ENSMUSG00000040265.16 ENSMUST00000161539.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000040265.16 ENSMUST00000070330.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000040265.16 ENSMUST00000086074.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000070126.1 ENSMUST00000093618.1 Transcript non_coding_transcript_exon_variant 29 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000078190.7 ENSMUST00000139662.1 Transcript non_coding_transcript_exon_variant 220 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000040265.16 ENSMUST00000159763.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000040265.16 ENSMUST00000160665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000078190.7 ENSMUST00000178978.1 Transcript non_coding_transcript_exon_variant 220 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000078190.7 ENSMUST00000185878.2 Transcript non_coding_transcript_exon_variant 120 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000078190.7 ENSMUST00000231582.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=34;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000078190.7 ENSMUST00000231725.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2026;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162217842_G/A chr1:162217842 A ENSMUSG00000078190.7 ENSMUST00000232506.1 Transcript non_coding_transcript_exon_variant 4 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_162489707_CA/TG chr1:162489707-162489708 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_162489712_C/T chr1:162489712 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_164127923_T/A chr1:164127923 A ENSMUSG00000026580.16 ENSMUST00000162746.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_164559277_ACAC/- chr1:164559277-164559280 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_164627791_AAAA/- chr1:164627791-164627794 - ENSMUSG00000103383.1 ENSMUST00000194406.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3963;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_165014307_-/AAGA chr1:165014306-165014307 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_165224672_T/G chr1:165224672 G ENSMUSG00000040843.10 ENSMUST00000043235.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_165224672_T/G chr1:165224672 G ENSMUSG00000040843.10 ENSMUST00000142191.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_165224672_T/G chr1:165224672 G ENSMUSG00000040843.10 ENSMUST00000156102.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3692;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_165224672_T/G chr1:165224672 G ENSMUSG00000040843.10 ENSMUST00000192436.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_165224672_T/G chr1:165224672 G ENSMUSG00000040843.10 ENSMUST00000195248.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2833;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_165581749_ACACACACCAA/- chr1:165581749-165581759 - ENSMUSG00000026567.16 ENSMUST00000027852.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4975;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_165581749_ACACACACCAA/- chr1:165581749-165581759 - ENSMUSG00000104474.1 ENSMUST00000191944.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3424;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166073933_TT/-/TTT chr1:166073933-166073934 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_166073933_TT/-/TTT chr1:166073933-166073934 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_166253608_CCCTCTCCCTCCCCCTCCCCCTCC/- chr1:166253608-166253631 - ENSMUSG00000040612.13 ENSMUST00000111416.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=508;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166253608_CCCTCTCCCTCCCCCTCCCCCTCC/- chr1:166253608-166253631 - ENSMUSG00000040612.13 ENSMUST00000192426.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=562;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166253608_CCCTCTCCCTCCCCCTCCCCCTCC/- chr1:166253608-166253631 - ENSMUSG00000040612.13 ENSMUST00000192638.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=562;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166253608_CCCTCTCCCTCCCCCTCCCCCTCC/- chr1:166253608-166253631 - ENSMUSG00000040612.13 ENSMUST00000192732.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=562;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166253608_CCCTCTCCCTCCCCCTCCCCCTCC/- chr1:166253608-166253631 - ENSMUSG00000040612.13 ENSMUST00000193860.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=562;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166253608_CCCTCTCCCTCCCCCTCCCCCTCC/- chr1:166253608-166253631 - ENSMUSG00000040612.13 ENSMUST00000194964.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=562;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166253608_CCCTCTCCCTCCCCCTCCCCCTCC/- chr1:166253608-166253631 - ENSMUSG00000040612.13 ENSMUST00000195557.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=562;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_166703582_A/T chr1:166703582 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_166927618_TTT/-/T/TTTT chr1:166927618-166927620 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_166927618_TTT/-/T/TTTT chr1:166927618-166927620 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_166927618_TTT/-/T/TTTT chr1:166927618-166927620 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_167197216_A/G chr1:167197216 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_167883583_GGAA/- chr1:167883583-167883586 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_168030151_CACACA/-/CA chr1:168030151-168030156 - ENSMUSG00000093538.2 ENSMUST00000177351.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168030151_CACACA/-/CA chr1:168030151-168030156 CA ENSMUSG00000093538.2 ENSMUST00000177351.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168155524_A/T chr1:168155524 T ENSMUSG00000052534.15 ENSMUST00000064438.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3208;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168155524_A/T chr1:168155524 T ENSMUSG00000052534.15 ENSMUST00000097471.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2846;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168155524_A/T chr1:168155524 T ENSMUSG00000052534.15 ENSMUST00000176540.7 Transcript 3_prime_UTR_variant 4894 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168155524_A/T chr1:168155524 T ENSMUSG00000052534.15 ENSMUST00000176790.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2806;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168155524_A/T chr1:168155524 T ENSMUSG00000052534.15 ENSMUST00000188912.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168283820_GAGA/- chr1:168283820-168283823 - ENSMUSG00000052534.15 ENSMUST00000064438.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168283820_GAGA/- chr1:168283820-168283823 - ENSMUSG00000052534.15 ENSMUST00000072863.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168283820_GAGA/- chr1:168283820-168283823 - ENSMUSG00000052534.15 ENSMUST00000176482.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168283820_GAGA/- chr1:168283820-168283823 - ENSMUSG00000052534.15 ENSMUST00000176540.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168283820_GAGA/- chr1:168283820-168283823 - ENSMUSG00000052534.15 ENSMUST00000176790.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168283820_GAGA/- chr1:168283820-168283823 - ENSMUSG00000052534.15 ENSMUST00000188912.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_168716518_T/C chr1:168716518 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_169232836_TATA/- chr1:169232836-169232839 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_169349354_TATA/- chr1:169349354-169349357 - ENSMUSG00000103530.1 ENSMUST00000192576.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1722;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_169374310_TCTC/- chr1:169374310-169374313 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_169386432_TGTG/- chr1:169386432-169386435 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_169906815_CACA/- chr1:169906815-169906818 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_170650816_CC/- chr1:170650816-170650817 - ENSMUSG00000038463.8 ENSMUST00000046792.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170926812_GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr1:170926812-170926871 - ENSMUSG00000038421.13 ENSMUST00000046322.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170926812_GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr1:170926812-170926871 - ENSMUSG00000038421.13 ENSMUST00000159149.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4413;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170926812_GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr1:170926812-170926871 - ENSMUSG00000038421.13 ENSMUST00000159171.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170926812_GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr1:170926812-170926871 - ENSMUSG00000089838.1 ENSMUST00000159266.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1168;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170926812_GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr1:170926812-170926871 - ENSMUSG00000038421.13 ENSMUST00000161050.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170926812_GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr1:170926812-170926871 - ENSMUSG00000038421.13 ENSMUST00000162136.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170926812_GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr1:170926812-170926871 - ENSMUSG00000038421.13 ENSMUST00000162887.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170953777_ACAC/-/AC chr1:170953777-170953780 - ENSMUSG00000026656.15 ENSMUST00000027966.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4837;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_170953777_ACAC/-/AC chr1:170953777-170953780 AC ENSMUSG00000026656.15 ENSMUST00000027966.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4837;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171118339_T/A chr1:171118339 A ENSMUSG00000026649.14 ENSMUST00000027959.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3322;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171118339_T/A chr1:171118339 A ENSMUSG00000026649.14 ENSMUST00000127394.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4338;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171118339_T/A chr1:171118339 A ENSMUSG00000026649.14 ENSMUST00000129651.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171118339_T/A chr1:171118339 A ENSMUSG00000026649.14 ENSMUST00000143623.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4811;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171118339_T/A chr1:171118339 A ENSMUSG00000026649.14 ENSMUST00000148200.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3325;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171118339_T/A chr1:171118339 A ENSMUSG00000026649.14 ENSMUST00000151340.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171118339_T/A chr1:171118339 A ENSMUSG00000026649.14 ENSMUST00000156789.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4835;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171735666_A/C chr1:171735666 C ENSMUSG00000095636.1 ENSMUST00000082776.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2261;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171735666_A/C chr1:171735666 C ENSMUSG00000088291.1 ENSMUST00000157666.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3552;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_171815332_AAAG/- chr1:171815332-171815335 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_172265189_TTAT/- chr1:172265189-172265192 - ENSMUSG00000038034.15 ENSMUST00000139528.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_172265189_TTAT/- chr1:172265189-172265192 - ENSMUSG00000038034.15 ENSMUST00000155363.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_172723128_G/A chr1:172723128 A ENSMUSG00000037942.5 ENSMUST00000194251.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_173008974_T/A chr1:173008974 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_173420172_-/AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAAA chr1:173420171-173420172 AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAAA ENSMUSG00000037860.15 ENSMUST00000147604.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_173420172_-/AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAAA chr1:173420171-173420172 AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAAA ENSMUSG00000037860.15 ENSMUST00000173023.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=426;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_173420172_-/AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAAA chr1:173420171-173420172 AAAAAAAAAAAAAAAAAAAAAAAAACACAAAAAAAAAAAAA ENSMUSG00000037860.15 ENSMUST00000174263.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174321536_ACAC/-/AC chr1:174321536-174321539 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_174321536_ACAC/-/AC chr1:174321536-174321539 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_174355123_ACAC/-/AC chr1:174355123-174355126 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_174355123_ACAC/-/AC chr1:174355123-174355126 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_174618374_ATATCT/- chr1:174618374-174618379 - ENSMUSG00000028354.13 ENSMUST00000030039.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174618374_ATATCT/- chr1:174618374-174618379 - ENSMUSG00000028354.13 ENSMUST00000191971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174618374_ATATCT/- chr1:174618374-174618379 - ENSMUSG00000028354.13 ENSMUST00000195300.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2728;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174618374_ATATCT/- chr1:174618374-174618379 - ENSMUSG00000028354.13 ENSMUST00000195621.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174636146_T/-/TT chr1:174636146 - ENSMUSG00000028354.13 ENSMUST00000030039.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174636146_T/-/TT chr1:174636146 TT ENSMUSG00000028354.13 ENSMUST00000030039.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174636146_T/-/TT chr1:174636146 - ENSMUSG00000028354.13 ENSMUST00000191971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174636146_T/-/TT chr1:174636146 TT ENSMUSG00000028354.13 ENSMUST00000191971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174636146_T/-/TT chr1:174636146 - ENSMUSG00000028354.13 ENSMUST00000195621.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174636146_T/-/TT chr1:174636146 TT ENSMUSG00000028354.13 ENSMUST00000195621.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174674076_C/G chr1:174674076 G ENSMUSG00000028354.13 ENSMUST00000030039.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174674076_C/G chr1:174674076 G ENSMUSG00000028354.13 ENSMUST00000191971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174674076_C/G chr1:174674076 G ENSMUSG00000028354.13 ENSMUST00000195621.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174691568_TCTC/- chr1:174691568-174691571 - ENSMUSG00000028354.13 ENSMUST00000030039.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174691568_TCTC/- chr1:174691568-174691571 - ENSMUSG00000028354.13 ENSMUST00000191971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174691568_TCTC/- chr1:174691568-174691571 - ENSMUSG00000028354.13 ENSMUST00000195621.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174717180_GGGGAGGGGGAGGGGGAGGGGGAG/- chr1:174717180-174717203 - ENSMUSG00000028354.13 ENSMUST00000030039.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174717180_GGGGAGGGGGAGGGGGAGGGGGAG/- chr1:174717180-174717203 - ENSMUSG00000028354.13 ENSMUST00000193905.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174784456_GTGT/- chr1:174784456-174784459 - ENSMUSG00000028354.13 ENSMUST00000030039.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_174784456_GTGT/- chr1:174784456-174784459 - ENSMUSG00000028354.13 ENSMUST00000193905.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_175014478_T/C chr1:175014478 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_175055717_T/A chr1:175055717 A ENSMUSG00000026527.13 ENSMUST00000027812.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4019;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_175055717_T/A chr1:175055717 A ENSMUSG00000026527.13 ENSMUST00000192203.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4020;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_175055717_T/A chr1:175055717 A ENSMUSG00000026527.13 ENSMUST00000192227.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3500;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_175055717_T/A chr1:175055717 A ENSMUSG00000026527.13 ENSMUST00000194288.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4019;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_175055717_T/A chr1:175055717 A ENSMUSG00000026527.13 ENSMUST00000194555.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3370;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_175055717_T/A chr1:175055717 A ENSMUSG00000026527.13 ENSMUST00000195324.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3371;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_175055717_T/A chr1:175055717 A ENSMUSG00000026527.13 ENSMUST00000195477.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4019;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176383715_T/C chr1:176383715 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_176856798_T/C chr1:176856798 C ENSMUSG00000026504.17 ENSMUST00000027785.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856798_T/C chr1:176856798 C ENSMUSG00000026504.17 ENSMUST00000056773.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856798_T/C chr1:176856798 C ENSMUSG00000026504.17 ENSMUST00000123409.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856798_T/C chr1:176856798 C ENSMUSG00000026504.17 ENSMUST00000133305.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856798_T/C chr1:176856798 C ENSMUSG00000103584.1 ENSMUST00000193938.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2239;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856869_G/A chr1:176856869 A ENSMUSG00000026504.17 ENSMUST00000027785.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856869_G/A chr1:176856869 A ENSMUSG00000026504.17 ENSMUST00000056773.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856869_G/A chr1:176856869 A ENSMUSG00000026504.17 ENSMUST00000123409.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856869_G/A chr1:176856869 A ENSMUSG00000026504.17 ENSMUST00000133305.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176856869_G/A chr1:176856869 A ENSMUSG00000103584.1 ENSMUST00000193938.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2310;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176875044_CACACA/- chr1:176875044-176875049 - ENSMUSG00000026504.17 ENSMUST00000027785.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176875044_CACACA/- chr1:176875044-176875049 - ENSMUSG00000026504.17 ENSMUST00000123409.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176875044_CACACA/- chr1:176875044-176875049 - ENSMUSG00000026504.17 ENSMUST00000133305.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176875044_CACACA/- chr1:176875044-176875049 - ENSMUSG00000093132.1 ENSMUST00000175391.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4785;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176899612_C/T chr1:176899612 T ENSMUSG00000026504.17 ENSMUST00000027785.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176899612_C/T chr1:176899612 T ENSMUSG00000026504.17 ENSMUST00000123409.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176899612_C/T chr1:176899612 T ENSMUSG00000026504.17 ENSMUST00000133305.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176899882_A/T chr1:176899882 T ENSMUSG00000026504.17 ENSMUST00000027785.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176899882_A/T chr1:176899882 T ENSMUSG00000026504.17 ENSMUST00000123409.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_176899882_A/T chr1:176899882 T ENSMUSG00000026504.17 ENSMUST00000133305.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_177111910_G/T chr1:177111910 T ENSMUSG00000019699.16 ENSMUST00000019843.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_177111910_G/T chr1:177111910 T ENSMUSG00000019699.16 ENSMUST00000111159.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_177111910_G/T chr1:177111910 T ENSMUSG00000019699.16 ENSMUST00000111160.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_177149823_CTCT/- chr1:177149823-177149826 - ENSMUSG00000019699.16 ENSMUST00000019843.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_177149823_CTCT/- chr1:177149823-177149826 - ENSMUSG00000019699.16 ENSMUST00000111159.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_177149823_CTCT/- chr1:177149823-177149826 - ENSMUSG00000019699.16 ENSMUST00000111160.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_177662170_TGTG/- chr1:177662170-177662173 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_177940888_A/C chr1:177940888 C ENSMUSG00000102483.1 ENSMUST00000194528.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_178762682_TGTG/- chr1:178762682-178762685 - ENSMUSG00000026494.12 ENSMUST00000161017.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_178842257_TGTG/- chr1:178842257-178842260 - ENSMUSG00000026494.12 ENSMUST00000160789.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_178842257_TGTG/- chr1:178842257-178842260 - ENSMUSG00000026494.12 ENSMUST00000161017.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_179902950_TCTATCTA/- chr1:179902950-179902957 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000076687.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000097450.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000097453.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000111117.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000133890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000135056.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000143176.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000145181.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000145274.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180135512_TT/- chr1:180135512-180135513 - ENSMUSG00000026490.18 ENSMUST00000212756.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180910130_TT/- chr1:180910130-180910131 - ENSMUSG00000026520.8 ENSMUST00000027802.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2042;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180910130_TT/- chr1:180910130-180910131 - ENSMUSG00000026520.8 ENSMUST00000194026.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3511;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180910130_TT/- chr1:180910130-180910131 - ENSMUSG00000026520.8 ENSMUST00000194253.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2043;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180910130_TT/- chr1:180910130-180910131 - ENSMUSG00000026520.8 ENSMUST00000195270.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3228;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180914635_AA/- chr1:180914635-180914636 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_180958883_TT/-/TTT chr1:180958883-180958884 - ENSMUSG00000026519.16 ENSMUST00000027800.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 TTT ENSMUSG00000026519.16 ENSMUST00000027800.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 - ENSMUSG00000085563.2 ENSMUST00000128545.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=734;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 TTT ENSMUSG00000085563.2 ENSMUST00000128545.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=734;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 - ENSMUSG00000026519.16 ENSMUST00000159436.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 TTT ENSMUSG00000026519.16 ENSMUST00000159436.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 - ENSMUSG00000026519.16 ENSMUST00000161523.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 TTT ENSMUSG00000026519.16 ENSMUST00000161523.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 - ENSMUSG00000026519.16 ENSMUST00000161942.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1183;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 TTT ENSMUSG00000026519.16 ENSMUST00000161942.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1183;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 - ENSMUSG00000026519.16 ENSMUST00000162283.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4011;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_180958883_TT/-/TTT chr1:180958883-180958884 TTT ENSMUSG00000026519.16 ENSMUST00000162283.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4011;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_181532659_T/C chr1:181532659 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_183606392_AA/-/AAA chr1:183606392-183606393 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_183606392_AA/-/AAA chr1:183606392-183606393 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_184053825_TGTG/-/TG chr1:184053825-184053828 - ENSMUSG00000039384.8 ENSMUST00000048655.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184053825_TGTG/-/TG chr1:184053825-184053828 TG ENSMUSG00000039384.8 ENSMUST00000048655.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184285308_CTTA/- chr1:184285308-184285311 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_184285332_T/C chr1:184285332 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_184803322_TTTT/-/TTT chr1:184803322-184803325 - ENSMUSG00000026621.13 ENSMUST00000048462.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184803322_TTTT/-/TTT chr1:184803322-184803325 TTT ENSMUSG00000026621.13 ENSMUST00000048462.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184803322_TTTT/-/TTT chr1:184803322-184803325 - ENSMUSG00000026621.13 ENSMUST00000110992.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184803322_TTTT/-/TTT chr1:184803322-184803325 TTT ENSMUSG00000026621.13 ENSMUST00000110992.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184803322_TTTT/-/TTT chr1:184803322-184803325 - ENSMUSG00000026621.13 ENSMUST00000189492.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184803322_TTTT/-/TTT chr1:184803322-184803325 TTT ENSMUSG00000026621.13 ENSMUST00000189492.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000026621.13 ENSMUST00000048462.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3990;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000073481.9 ENSMUST00000068725.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000026621.13 ENSMUST00000110992.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3874;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000073481.9 ENSMUST00000159293.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4049;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000073481.9 ENSMUST00000160318.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000073481.9 ENSMUST00000161341.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000073481.9 ENSMUST00000161359.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000073481.9 ENSMUST00000162261.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815187_A/G chr1:184815187 G ENSMUSG00000073481.9 ENSMUST00000162866.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000026621.13 ENSMUST00000048462.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3998;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000073481.9 ENSMUST00000068725.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000026621.13 ENSMUST00000110992.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3882;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000073481.9 ENSMUST00000159293.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4041;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000073481.9 ENSMUST00000160318.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000073481.9 ENSMUST00000161341.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000073481.9 ENSMUST00000161359.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000073481.9 ENSMUST00000162261.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_184815195_A/G chr1:184815195 G ENSMUSG00000073481.9 ENSMUST00000162866.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186113566_GAGA/- chr1:186113566-186113569 - ENSMUSG00000039246.8 ENSMUST00000045388.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186113566_GAGA/- chr1:186113566-186113569 - ENSMUSG00000039246.8 ENSMUST00000195481.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186113566_GAGA/- chr1:186113566-186113569 - ENSMUSG00000103056.1 ENSMUST00000195813.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1193;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186651450_T/- chr1:186651450 - ENSMUSG00000039239.14 ENSMUST00000045288.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186651450_T/- chr1:186651450 - ENSMUSG00000039239.14 ENSMUST00000191766.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1460;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186651450_T/- chr1:186651450 - ENSMUSG00000039239.14 ENSMUST00000194593.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186651450_T/- chr1:186651450 - ENSMUSG00000039239.14 ENSMUST00000194960.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1394;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186651450_T/- chr1:186651450 - ENSMUSG00000039239.14 ENSMUST00000195201.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_186807708_T/- chr1:186807708 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_187710126_AT/- chr1:187710126-187710127 - ENSMUSG00000026610.13 ENSMUST00000110939.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_187710126_AT/- chr1:187710126-187710127 - ENSMUSG00000026610.13 ENSMUST00000127489.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_187710126_AT/- chr1:187710126-187710127 - ENSMUSG00000026610.13 ENSMUST00000152927.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_188039656_-/TATC chr1:188039655-188039656 TATC ENSMUSG00000026610.13 ENSMUST00000027906.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_188039656_-/TATC chr1:188039655-188039656 TATC ENSMUSG00000026610.13 ENSMUST00000110938.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_188039656_-/TATC chr1:188039655-188039656 TATC ENSMUSG00000026610.13 ENSMUST00000110939.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_188039656_-/TATC chr1:188039655-188039656 TATC ENSMUSG00000026610.13 ENSMUST00000127489.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_189711947_TG/- chr1:189711947-189711948 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_189746999_CTCT/- chr1:189746999-189747002 - ENSMUSG00000026604.17 ENSMUST00000097442.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_189746999_CTCT/- chr1:189746999-189747002 - ENSMUSG00000026604.17 ENSMUST00000194127.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_190483944_GG/-/G chr1:190483944-190483945 - ENSMUSG00000093064.2 ENSMUST00000175323.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=787;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_190483944_GG/-/G chr1:190483944-190483945 G ENSMUSG00000093064.2 ENSMUST00000175323.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=787;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_190483944_GG/-/G chr1:190483944-190483945 - ENSMUSG00000106474.1 ENSMUST00000198711.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=928;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_190483944_GG/-/G chr1:190483944-190483945 G ENSMUSG00000106474.1 ENSMUST00000198711.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=928;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191387882_G/A chr1:191387882 A ENSMUSG00000026626.11 ENSMUST00000067976.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191387882_G/A chr1:191387882 A ENSMUSG00000026626.11 ENSMUST00000194953.1 Transcript non_coding_transcript_exon_variant 625 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191387882_G/A chr1:191387882 A ENSMUSG00000026626.11 ENSMUST00000195605.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2556;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191387882_G/A chr1:191387882 A ENSMUSG00000026626.11 ENSMUST00000195859.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191585678_TGTG/- chr1:191585678-191585681 - ENSMUSG00000037461.10 ENSMUST00000045450.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191585678_TGTG/- chr1:191585678-191585681 - ENSMUSG00000037461.10 ENSMUST00000192681.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1957;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191585678_TGTG/- chr1:191585678-191585681 - ENSMUSG00000037461.10 ENSMUST00000193569.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191585678_TGTG/- chr1:191585678-191585681 - ENSMUSG00000037461.10 ENSMUST00000193961.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191585678_TGTG/- chr1:191585678-191585681 - ENSMUSG00000037461.10 ENSMUST00000194785.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191585678_TGTG/- chr1:191585678-191585681 - ENSMUSG00000037461.10 ENSMUST00000194877.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_191794081_GTGT/- chr1:191794081-191794084 - ENSMUSG00000102596.1 ENSMUST00000192352.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2767;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000073279.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000110849.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000192128.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000192158.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000192222.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2133;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000192491.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000192866.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192118479_A/C chr1:192118479 C ENSMUSG00000037395.15 ENSMUST00000194750.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192199573_T/C chr1:192199573 C ENSMUSG00000058248.12 ENSMUST00000078470.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192199573_T/C chr1:192199573 C ENSMUSG00000058248.12 ENSMUST00000110844.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192422702_-/TTTTTT chr1:192422701-192422702 TTTTTT ENSMUSG00000058248.12 ENSMUST00000078470.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_192422702_-/TTTTTT chr1:192422701-192422702 TTTTTT ENSMUSG00000058248.12 ENSMUST00000110844.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193045971_G/A/GAAGA chr1:193045971 A ENSMUSG00000103640.1 ENSMUST00000192297.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3566;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193045971_G/A/GAAGA chr1:193045971 GAAGA ENSMUSG00000103640.1 ENSMUST00000192297.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3566;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000016194.14 ENSMUST00000016338.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000089683.2 ENSMUST00000159273.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000016194.14 ENSMUST00000159644.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000016194.14 ENSMUST00000160929.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000016194.14 ENSMUST00000161406.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2958;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000016194.14 ENSMUST00000161737.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000026639.18 ENSMUST00000162977.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000026639.18 ENSMUST00000192322.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_193226495_AA/- chr1:193226495-193226496 - ENSMUSG00000026639.18 ENSMUST00000194677.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194069009_TCTC/-/TC chr1:194069009-194069012 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_194069009_TCTC/-/TC chr1:194069009-194069012 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr1_194993331_TTT/-/T chr1:194993331-194993333 - ENSMUSG00000096929.7 ENSMUST00000181226.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194993331_TTT/-/T chr1:194993331-194993333 T ENSMUSG00000096929.7 ENSMUST00000181226.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194993331_TTT/-/T chr1:194993331-194993333 - ENSMUSG00000096929.7 ENSMUST00000181947.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194993331_TTT/-/T chr1:194993331-194993333 T ENSMUSG00000096929.7 ENSMUST00000181947.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194993331_TTT/-/T chr1:194993331-194993333 - ENSMUSG00000104206.1 ENSMUST00000191885.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194993331_TTT/-/T chr1:194993331-194993333 T ENSMUSG00000104206.1 ENSMUST00000191885.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194993331_TTT/-/T chr1:194993331-194993333 - ENSMUSG00000104525.1 ENSMUST00000192325.1 Transcript non_coding_transcript_exon_variant 74-76 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr1_194993331_TTT/-/T chr1:194993331-194993333 T ENSMUSG00000104525.1 ENSMUST00000192325.1 Transcript non_coding_transcript_exon_variant 74-76 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_3102301_TT/-/T chr2:3102301-3102302 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_3102301_TT/-/T chr2:3102301-3102302 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_4102170_CTTT/- chr2:4102170-4102173 - ENSMUSG00000026657.16 ENSMUST00000138735.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_4102170_CTTT/- chr2:4102170-4102173 - ENSMUSG00000026657.16 ENSMUST00000177457.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_4102170_CTTT/- chr2:4102170-4102173 - ENSMUSG00000102517.1 ENSMUST00000195785.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1704;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5050846_AGATCACTGTCCATCTTTTTTTTTTTTGAAACAAAAAAAAGATGGACAGTGATCTA/- chr2:5050846-5050901 - ENSMUSG00000026672.11 ENSMUST00000027986.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5050846_AGATCACTGTCCATCTTTTTTTTTTTTGAAACAAAAAAAAGATGGACAGTGATCTA/- chr2:5050846-5050901 - ENSMUSG00000026672.11 ENSMUST00000114996.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5050846_AGATCACTGTCCATCTTTTTTTTTTTTGAAACAAAAAAAAGATGGACAGTGATCTA/- chr2:5050846-5050901 - ENSMUSG00000026672.11 ENSMUST00000143809.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5164810_ACAC/-/AC chr2:5164810-5164813 - ENSMUSG00000026676.7 ENSMUST00000027988.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5164810_ACAC/-/AC chr2:5164810-5164813 AC ENSMUSG00000026676.7 ENSMUST00000027988.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5164810_ACAC/-/AC chr2:5164810-5164813 - ENSMUSG00000097770.1 ENSMUST00000180479.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5164810_ACAC/-/AC chr2:5164810-5164813 AC ENSMUSG00000097770.1 ENSMUST00000180479.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5814538_-/AGAA chr2:5814537-5814538 AGAA ENSMUSG00000039128.13 ENSMUST00000043864.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5814538_-/AGAA chr2:5814537-5814538 AGAA ENSMUSG00000039128.13 ENSMUST00000124287.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5814538_-/AGAA chr2:5814537-5814538 AGAA ENSMUSG00000039128.13 ENSMUST00000128467.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5814538_-/AGAA chr2:5814537-5814538 AGAA ENSMUSG00000039128.13 ENSMUST00000138312.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3715;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5814538_-/AGAA chr2:5814537-5814538 AGAA ENSMUSG00000039128.13 ENSMUST00000152519.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5934535_C/A/CA chr2:5934535 A ENSMUSG00000025815.13 ENSMUST00000026924.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5934535_C/A/CA chr2:5934535 CA ENSMUSG00000025815.13 ENSMUST00000026924.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5934535_C/A/CA chr2:5934535 A ENSMUSG00000025815.13 ENSMUST00000095147.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5934535_C/A/CA chr2:5934535 CA ENSMUSG00000025815.13 ENSMUST00000095147.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5934535_C/A/CA chr2:5934535 A ENSMUSG00000025815.13 ENSMUST00000151649.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3679;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_5934535_C/A/CA chr2:5934535 CA ENSMUSG00000025815.13 ENSMUST00000151649.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3679;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000002176.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000114923.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000114924.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000114934.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000123142.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000137733.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000138347.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000170438.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000182404.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000182523.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000182560.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000182706.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000182851.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000183091.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000183209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6799036_-/TCTTT chr2:6799035-6799036 TCTTT ENSMUSG00000002107.18 ENSMUST00000183984.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000002176.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000114923.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000114924.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000114934.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000123142.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000137733.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000138347.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000170438.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000182404.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000182523.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000182560.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000182706.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000182851.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000183091.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000183209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840166_T/G chr2:6840166 G ENSMUSG00000002107.18 ENSMUST00000183984.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000002176.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000114923.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000114924.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000114934.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000123142.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000137733.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000138347.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000170438.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000182404.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000182523.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000182560.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000182706.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000182851.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000183091.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000183209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_6840171_A/G chr2:6840171 G ENSMUSG00000002107.18 ENSMUST00000183984.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_7512417_-/CCTTC chr2:7512416-7512417 CCTTC ENSMUSG00000002107.18 ENSMUST00000182037.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2853;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_7530232_TCTC/- chr2:7530232-7530235 - ENSMUSG00000099424.1 ENSMUST00000187783.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_7673825_C/T chr2:7673825 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_7941291_ACAC/- chr2:7941291-7941294 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_8049431_TT/- chr2:8049431-8049432 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_8845659_CTCT/- chr2:8845659-8845662 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_9543486_AA/- chr2:9543486-9543487 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_9603992_-/GAGA chr2:9603991-9603992 GAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_9611312_AGAGAGAG/-/AGAG/AGAGAG chr2:9611312-9611319 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_9611312_AGAGAGAG/-/AGAG/AGAGAG chr2:9611312-9611319 AGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_9611312_AGAGAGAG/-/AGAG/AGAGAG chr2:9611312-9611319 AGAGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_10680979_C/T chr2:10680979 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_10681064_C/G chr2:10681064 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_10905014_T/A chr2:10905014 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_10905029_T/C chr2:10905029 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_11459332_TGTG/- chr2:11459332-11459335 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_11461919_GAGTGTGTATGTGTGTGTGAGTGTGTATGTGTGA/- chr2:11461919-11461952 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_11461967_GAGTGTGTGTGTGAGAGTGTGTGTGTGTGAGTGTGTATGTGTGA/- chr2:11461967-11462010 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000078834.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000091456.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000114831.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000114832.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000114833.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000114834.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000123600.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000124448.1 Transcript non_coding_transcript_exon_variant 2315-? - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000126394.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000128156.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000130245.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1826;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000133975.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=106;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000135341.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000138349.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000138856.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000139774.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2765;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000148748.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_11720392_TAAATAAA/- chr2:11720392-11720399 - ENSMUSG00000023206.16 ENSMUST00000191662.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_12081469_G/C chr2:12081469 C ENSMUSG00000080801.2 ENSMUST00000120962.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1143;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_12212467_GTGT/- chr2:12212467-12212470 - ENSMUSG00000026768.10 ENSMUST00000028106.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_12212467_GTGT/- chr2:12212467-12212470 - ENSMUSG00000026768.10 ENSMUST00000172791.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_12674339_TG/- chr2:12674339-12674340 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_12745354_AA/- chr2:12745354-12745355 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_13492535_-/TTTTG chr2:13492534-13492535 TTTTG ENSMUSG00000026726.10 ENSMUST00000091436.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=721;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_13865283_C/T chr2:13865283 T ENSMUSG00000063275.15 ENSMUST00000131730.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14079462_-/TTC chr2:14079461-14079462 TTC ENSMUSG00000026718.17 ENSMUST00000028050.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14079462_-/TTC chr2:14079461-14079462 TTC ENSMUSG00000026718.17 ENSMUST00000102960.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14079462_-/TTC chr2:14079461-14079462 TTC ENSMUSG00000026718.17 ENSMUST00000138989.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14079462_-/TTC chr2:14079461-14079462 TTC ENSMUSG00000026718.17 ENSMUST00000156901.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14079462_-/TTC chr2:14079461-14079462 TTC ENSMUSG00000026718.17 ENSMUST00000193636.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14288820_A/T chr2:14288820 T ENSMUSG00000026712.3 ENSMUST00000028045.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14468684_ACAC/-/AC chr2:14468684-14468687 - ENSMUSG00000036949.16 ENSMUST00000082290.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14468684_ACAC/-/AC chr2:14468684-14468687 AC ENSMUSG00000036949.16 ENSMUST00000082290.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14468684_ACAC/-/AC chr2:14468684-14468687 - ENSMUSG00000036949.16 ENSMUST00000114731.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14468684_ACAC/-/AC chr2:14468684-14468687 AC ENSMUSG00000036949.16 ENSMUST00000114731.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14573480_CACA/- chr2:14573480-14573483 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_14855745_G/- chr2:14855745 - ENSMUSG00000057914.15 ENSMUST00000114723.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14855745_G/- chr2:14855745 - ENSMUSG00000057914.15 ENSMUST00000137746.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14855745_G/- chr2:14855745 - ENSMUSG00000057914.15 ENSMUST00000156027.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14855745_G/- chr2:14855745 - ENSMUSG00000057914.15 ENSMUST00000193262.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14855745_G/- chr2:14855745 - ENSMUSG00000057914.15 ENSMUST00000193800.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_14855745_G/- chr2:14855745 - ENSMUSG00000057914.15 ENSMUST00000194921.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_15326264_G/T chr2:15326264 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_15326267_G/T chr2:15326267 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_15377181_T/C chr2:15377181 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_15580123_A/T chr2:15580123 T ENSMUSG00000075520.5 ENSMUST00000146205.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_15800575_C/T chr2:15800575 T ENSMUSG00000075520.5 ENSMUST00000146205.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_16526423_TCTC/- chr2:16526423-16526426 - ENSMUSG00000026748.13 ENSMUST00000028081.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_16526423_TCTC/- chr2:16526423-16526426 - ENSMUSG00000026748.13 ENSMUST00000114702.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_16526423_TCTC/- chr2:16526423-16526426 - ENSMUSG00000026748.13 ENSMUST00000114703.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_16950677_CAA/C/AAA chr2:16950677-16950679 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_16950677_CAA/C/AAA chr2:16950677-16950679 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_17161363_C/T chr2:17161363 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_17481296_G/A chr2:17481296 A ENSMUSG00000053702.16 ENSMUST00000028080.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_17481296_G/A chr2:17481296 A ENSMUSG00000053702.16 ENSMUST00000124611.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_17481296_G/A chr2:17481296 A ENSMUSG00000053702.16 ENSMUST00000145545.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_17708893_G/T chr2:17708893 T ENSMUSG00000053702.16 ENSMUST00000028080.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_17745288_-/AGG chr2:17745287-17745288 AGG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_17975329_GTGT/-/GT chr2:17975329-17975332 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_17975329_GTGT/-/GT chr2:17975329-17975332 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_18501569_A/T chr2:18501569 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_18732801_AA/- chr2:18732801-18732802 - ENSMUSG00000037708.16 ENSMUST00000095132.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_18732801_AA/- chr2:18732801-18732802 - ENSMUSG00000037708.16 ENSMUST00000173763.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=767;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_18790540_TT/-/TTT chr2:18790540-18790541 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_18790540_TT/-/TTT chr2:18790540-18790541 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_18946310_TATA/- chr2:18946310-18946313 - ENSMUSG00000026737.12 ENSMUST00000006912.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_19048946_TA/- chr2:19048946-19048947 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_20272188_T/C chr2:20272188 C ENSMUSG00000036617.16 ENSMUST00000114610.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000045555.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000066509.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000114604.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000114610.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000114614.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000114627.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000123383.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000129278.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000131714.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000136870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000146613.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20606986_TCTTT/- chr2:20606986-20606990 - ENSMUSG00000036617.16 ENSMUST00000146881.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000045555.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000066509.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000114604.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000114610.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000114614.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000114627.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000123383.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000129278.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000131714.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000136870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000146613.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20627681_TT/- chr2:20627681-20627682 - ENSMUSG00000036617.16 ENSMUST00000146881.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000045555.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000066509.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000114604.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000114606.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000114607.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000114608.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000114610.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4705;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000114614.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000114627.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000125772.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20749521_CTCT/- chr2:20749521-20749524 - ENSMUSG00000036617.16 ENSMUST00000146488.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 - ENSMUSG00000036591.16 ENSMUST00000114594.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 A ENSMUSG00000036591.16 ENSMUST00000114594.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 - ENSMUSG00000036591.16 ENSMUST00000141298.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 A ENSMUSG00000036591.16 ENSMUST00000141298.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 - ENSMUSG00000036591.16 ENSMUST00000154230.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 A ENSMUSG00000036591.16 ENSMUST00000154230.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 - ENSMUSG00000036591.16 ENSMUST00000156142.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3769;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 A ENSMUSG00000036591.16 ENSMUST00000156142.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3769;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 - ENSMUSG00000036591.16 ENSMUST00000173194.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 A ENSMUSG00000036591.16 ENSMUST00000173194.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 - ENSMUSG00000036591.16 ENSMUST00000174584.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20882588_AA/-/A chr2:20882588-20882589 A ENSMUSG00000036591.16 ENSMUST00000174584.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_20977708_ACAC/- chr2:20977708-20977711 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_21029180_CTTT/- chr2:21029180-21029183 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_21330776_C/T chr2:21330776 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_21355913_-/TT chr2:21355912-21355913 TT ENSMUSG00000085680.1 ENSMUST00000133391.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_21770350_-/AAAAT chr2:21770349-21770350 AAAAT ENSMUSG00000045967.11 ENSMUST00000055946.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_21770350_-/AAAAT chr2:21770349-21770350 AAAAT ENSMUSG00000045967.11 ENSMUST00000155760.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_21990156_GTGT/- chr2:21990156-21990159 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_22091620_ACTCACA/- chr2:22091620-22091626 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_22091628_T/C chr2:22091628 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_22267429_-/GTGTGT chr2:22267428-22267429 GTGTGT ENSMUSG00000025716.14 ENSMUST00000044749.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22267429_-/GTGTGT chr2:22267428-22267429 GTGTGT ENSMUSG00000025716.14 ENSMUST00000138850.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22267429_-/GTGTGT chr2:22267428-22267429 GTGTGT ENSMUSG00000025716.14 ENSMUST00000142435.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22267429_-/GTGTGT chr2:22267428-22267429 GTGTGT ENSMUSG00000025716.14 ENSMUST00000153002.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22593424_-/GAAA chr2:22593423-22593424 GAAA ENSMUSG00000025716.14 ENSMUST00000044749.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22593424_-/GAAA chr2:22593423-22593424 GAAA ENSMUSG00000083563.1 ENSMUST00000117219.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3776;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22593424_-/GAAA chr2:22593423-22593424 GAAA ENSMUSG00000082884.1 ENSMUST00000120651.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2890;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22593424_-/GAAA chr2:22593423-22593424 GAAA ENSMUSG00000025716.14 ENSMUST00000138863.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_22593424_-/GAAA chr2:22593423-22593424 GAAA ENSMUSG00000025716.14 ENSMUST00000149423.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_23818565_G/T chr2:23818565 T ENSMUSG00000088368.1 ENSMUST00000157743.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4488;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24516824_T/G chr2:24516824 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000046227.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000091348.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000102938.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000114432.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000139000.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000147147.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000150379.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000152161.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24898936_A/- chr2:24898936 - ENSMUSG00000036893.17 ENSMUST00000200655.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24941377_TTT/- chr2:24941377-24941379 - ENSMUSG00000093190.1 ENSMUST00000175449.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4421;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24946298_TT/- chr2:24946298-24946299 - ENSMUSG00000026974.11 ENSMUST00000028350.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3493;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_24946298_TT/- chr2:24946298-24946299 - ENSMUSG00000026974.11 ENSMUST00000148042.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3911;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 T ENSMUSG00000026932.14 ENSMUST00000028300.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 AA ENSMUSG00000026932.14 ENSMUST00000028300.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 TAA ENSMUSG00000026932.14 ENSMUST00000028300.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 T ENSMUSG00000026932.14 ENSMUST00000133212.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 AA ENSMUSG00000026932.14 ENSMUST00000133212.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 TAA ENSMUSG00000026932.14 ENSMUST00000133212.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 T ENSMUSG00000026932.14 ENSMUST00000140993.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 AA ENSMUSG00000026932.14 ENSMUST00000140993.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 TAA ENSMUSG00000026932.14 ENSMUST00000140993.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 T ENSMUSG00000026932.14 ENSMUST00000149408.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 AA ENSMUSG00000026932.14 ENSMUST00000149408.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26117927_TA/T/AA/TAA chr2:26117927-26117928 TAA ENSMUSG00000026932.14 ENSMUST00000149408.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026922.13 ENSMUST00000028286.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4666;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000065540.1 ENSMUST00000083606.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2966;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000100290.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000102907.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000131112.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2574;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026922.13 ENSMUST00000131940.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4666;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000139801.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000145575.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000147351.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=944;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000149460.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000149789.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3044;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000150404.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=152;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000152713.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000152988.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3043;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000166920.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000172683.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3756;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000173777.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3055;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000173920.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000092356.1 ENSMUST00000174066.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000174211.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000174465.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3632;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000174572.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2129;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000026921.18 ENSMUST00000174656.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2638;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26588390_GG/- chr2:26588390-26588391 - ENSMUSG00000105799.1 ENSMUST00000199077.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2972;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26994292_ACAC/- chr2:26994292-26994295 - ENSMUSG00000014852.16 ENSMUST00000014996.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_26994292_ACAC/- chr2:26994292-26994295 - ENSMUSG00000014852.16 ENSMUST00000102891.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_27585968_-/ATCT chr2:27585967-27585968 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_28345961_ATATAT/-/ATAT chr2:28345961-28345966 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_28345961_ATATAT/-/ATAT chr2:28345961-28345966 ATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_28539451_-/GGATT chr2:28539450-28539451 GGATT ENSMUSG00000026821.15 ENSMUST00000028170.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28539451_-/GGATT chr2:28539450-28539451 GGATT ENSMUSG00000026821.15 ENSMUST00000100241.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28539451_-/GGATT chr2:28539450-28539451 GGATT ENSMUSG00000026821.15 ENSMUST00000113893.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28539451_-/GGATT chr2:28539450-28539451 GGATT ENSMUSG00000026821.15 ENSMUST00000135803.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28539451_-/GGATT chr2:28539450-28539451 GGATT ENSMUSG00000026821.15 ENSMUST00000137215.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2882;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28539451_-/GGATT chr2:28539450-28539451 GGATT ENSMUSG00000026821.15 ENSMUST00000137513.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28539451_-/GGATT chr2:28539450-28539451 GGATT ENSMUSG00000026821.15 ENSMUST00000146217.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1275;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28591995_TATATA/-/TATA chr2:28591995-28592000 - ENSMUSG00000089055.1 ENSMUST00000158430.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3127;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28591995_TATATA/-/TATA chr2:28591995-28592000 TATA ENSMUSG00000089055.1 ENSMUST00000158430.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3127;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28971585_-/ACAC chr2:28971584-28971585 ACAC ENSMUSG00000079502.8 ENSMUST00000157048.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28971585_-/ACAC chr2:28971584-28971585 ACAC ENSMUSG00000079502.8 ENSMUST00000189027.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28971585_-/ACAC chr2:28971584-28971585 ACAC ENSMUSG00000079502.8 ENSMUST00000189711.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_28971585_-/ACAC chr2:28971584-28971585 ACAC ENSMUSG00000079502.8 ENSMUST00000190049.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_29291625_ACACAC/-/ACAC chr2:29291625-29291630 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_29291625_ACACAC/-/ACAC chr2:29291625-29291630 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000046257.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000095083.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000100225.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000113717.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000113719.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000129241.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000149038.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30005213_-/GTGT chr2:30005212-30005213 GTGT ENSMUSG00000057738.13 ENSMUST00000202844.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30043704_TTTT/- chr2:30043704-30043707 - ENSMUSG00000039715.8 ENSMUST00000113711.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30043704_TTTT/- chr2:30043704-30043707 - ENSMUSG00000039715.8 ENSMUST00000146275.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3464;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30466178_TTT/-/TT chr2:30466178-30466180 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_30466178_TTT/-/TT chr2:30466178-30466180 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_30546511_A/C chr2:30546511 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000061544.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000102849.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000125601.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3753;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000128295.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3854;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000138161.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000142232.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000154351.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4146;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_30991899_TGTG/- chr2:30991899-30991902 - ENSMUSG00000026854.16 ENSMUST00000170476.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4140;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31252686_AA/- chr2:31252686-31252687 - ENSMUSG00000062661.6 ENSMUST00000000199.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31252686_AA/- chr2:31252686-31252687 - ENSMUSG00000062661.6 ENSMUST00000150670.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31265641_TCTCTCTC/- chr2:31265641-31265648 - ENSMUSG00000062661.6 ENSMUST00000000199.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31265641_TCTCTCTC/- chr2:31265641-31265648 - ENSMUSG00000062661.6 ENSMUST00000150670.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31401335_A/G chr2:31401335 G ENSMUSG00000055632.18 ENSMUST00000113532.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31401335_A/G chr2:31401335 G ENSMUSG00000055632.18 ENSMUST00000130375.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31401335_A/G chr2:31401335 G ENSMUSG00000055632.18 ENSMUST00000226996.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31510006_TTT/- chr2:31510006-31510008 - ENSMUSG00000076441.9 ENSMUST00000102840.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31510006_TTT/- chr2:31510006-31510008 - ENSMUSG00000076441.9 ENSMUST00000126474.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_31510006_TTT/- chr2:31510006-31510008 - ENSMUSG00000076441.9 ENSMUST00000192802.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000078352.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000091089.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000113350.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000113352.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000113365.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000139624.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000201433.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000201494.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32331634_TGTG/- chr2:32331634-32331637 - ENSMUSG00000026825.17 ENSMUST00000202578.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32650050_ACAC/- chr2:32650050-32650053 - ENSMUSG00000026814.16 ENSMUST00000009705.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32650050_ACAC/- chr2:32650050-32650053 - ENSMUSG00000026814.16 ENSMUST00000113272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32650050_ACAC/- chr2:32650050-32650053 - ENSMUSG00000026814.16 ENSMUST00000139770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32650050_ACAC/- chr2:32650050-32650053 - ENSMUSG00000026814.16 ENSMUST00000167841.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32650050_ACAC/- chr2:32650050-32650053 - ENSMUSG00000093336.1 ENSMUST00000175595.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2276;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_32721727_TCTC/- chr2:32721727-32721730 - ENSMUSG00000059013.12 ENSMUST00000074248.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33314001_T/C chr2:33314001 C ENSMUSG00000038831.16 ENSMUST00000042615.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33314001_T/C chr2:33314001 C ENSMUSG00000038831.16 ENSMUST00000091039.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33314001_T/C chr2:33314001 C ENSMUSG00000038831.16 ENSMUST00000113164.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33314001_T/C chr2:33314001 C ENSMUSG00000038831.16 ENSMUST00000113165.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33314001_T/C chr2:33314001 C ENSMUSG00000038831.16 ENSMUST00000131298.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33797917_GTGT/-/GT chr2:33797917-33797920 - ENSMUSG00000038740.9 ENSMUST00000041555.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33797917_GTGT/-/GT chr2:33797917-33797920 GT ENSMUSG00000038740.9 ENSMUST00000041555.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33797917_GTGT/-/GT chr2:33797917-33797920 - ENSMUSG00000038740.9 ENSMUST00000192765.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_33797917_GTGT/-/GT chr2:33797917-33797920 GT ENSMUSG00000038740.9 ENSMUST00000192765.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000028224.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000102800.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000113099.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000113101.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000113103.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000113111.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000128855.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1613;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000137528.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000150859.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1657;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000167251.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702690_G/T chr2:34702690 T ENSMUSG00000026867.18 ENSMUST00000201772.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1591;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000028224.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000102800.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000113099.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000113101.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000113103.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000113111.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000128855.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1609;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000137528.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000150859.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1653;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000167251.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34702694_A/T chr2:34702694 T ENSMUSG00000026867.18 ENSMUST00000201772.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1595;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34862057_AAAA/- chr2:34862057-34862060 - ENSMUSG00000026869.12 ENSMUST00000028225.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34862057_AAAA/- chr2:34862057-34862060 - ENSMUSG00000026869.12 ENSMUST00000135575.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4366;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34862057_AAAA/- chr2:34862057-34862060 - ENSMUSG00000026869.12 ENSMUST00000143456.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_34862057_AAAA/- chr2:34862057-34862060 - ENSMUSG00000026869.12 ENSMUST00000189715.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4879;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 - ENSMUSG00000035778.17 ENSMUST00000102794.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 A ENSMUSG00000035778.17 ENSMUST00000102794.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 AAA ENSMUSG00000035778.17 ENSMUST00000102794.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 - ENSMUSG00000035778.17 ENSMUST00000113001.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 A ENSMUSG00000035778.17 ENSMUST00000113001.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 AAA ENSMUSG00000035778.17 ENSMUST00000113001.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 - ENSMUSG00000035778.17 ENSMUST00000113002.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 A ENSMUSG00000035778.17 ENSMUST00000113002.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 AAA ENSMUSG00000035778.17 ENSMUST00000113002.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 - ENSMUSG00000035778.17 ENSMUST00000149442.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 A ENSMUSG00000035778.17 ENSMUST00000149442.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35453070_AA/-/A/AAA chr2:35453070-35453071 AAA ENSMUSG00000035778.17 ENSMUST00000149442.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_35569364_ACAC/- chr2:35569364-35569367 - ENSMUSG00000026883.17 ENSMUST00000112986.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_36126201_TTT/- chr2:36126201-36126203 - ENSMUSG00000026889.12 ENSMUST00000028251.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_36126201_TTT/- chr2:36126201-36126203 - ENSMUSG00000026889.12 ENSMUST00000122456.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_36126201_TTT/- chr2:36126201-36126203 - ENSMUSG00000026889.12 ENSMUST00000134668.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_36126201_TTT/- chr2:36126201-36126203 - ENSMUSG00000026889.12 ENSMUST00000142809.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=17;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_36126201_TTT/- chr2:36126201-36126203 - ENSMUSG00000026889.12 ENSMUST00000200733.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_36361332_G/A chr2:36361332 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_36444005_T/C chr2:36444005 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_36697515_-/TT chr2:36697514-36697515 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_37123182_T/A/TA chr2:37123182 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_37123182_T/A/TA chr2:37123182 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_37408461_AAAA/- chr2:37408461-37408464 - ENSMUSG00000075376.10 ENSMUST00000100143.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_37408461_AAAA/- chr2:37408461-37408464 - ENSMUSG00000075376.10 ENSMUST00000112934.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_37408461_AAAA/- chr2:37408461-37408464 - ENSMUSG00000075376.10 ENSMUST00000112936.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_37408461_AAAA/- chr2:37408461-37408464 - ENSMUSG00000075376.10 ENSMUST00000124218.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1104;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_37408461_AAAA/- chr2:37408461-37408464 - ENSMUSG00000075376.10 ENSMUST00000125619.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 - ENSMUSG00000063972.13 ENSMUST00000076275.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 AA ENSMUSG00000063972.13 ENSMUST00000076275.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 AAA ENSMUSG00000063972.13 ENSMUST00000076275.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 - ENSMUSG00000063972.13 ENSMUST00000112877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 AA ENSMUSG00000063972.13 ENSMUST00000112877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 AAA ENSMUSG00000063972.13 ENSMUST00000112877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 - ENSMUSG00000063972.13 ENSMUST00000142130.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 AA ENSMUSG00000063972.13 ENSMUST00000142130.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38797176_AAAA/-/AA/AAA chr2:38797176-38797179 AAA ENSMUSG00000063972.13 ENSMUST00000142130.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38803317_TTT/-/TT chr2:38803317-38803319 - ENSMUSG00000063972.13 ENSMUST00000076275.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38803317_TTT/-/TT chr2:38803317-38803319 TT ENSMUSG00000063972.13 ENSMUST00000076275.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38803317_TTT/-/TT chr2:38803317-38803319 - ENSMUSG00000063972.13 ENSMUST00000112877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38803317_TTT/-/TT chr2:38803317-38803319 TT ENSMUSG00000063972.13 ENSMUST00000112877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38803317_TTT/-/TT chr2:38803317-38803319 - ENSMUSG00000063972.13 ENSMUST00000142130.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_38803317_TTT/-/TT chr2:38803317-38803319 TT ENSMUSG00000063972.13 ENSMUST00000142130.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_39456951_TT/-/T chr2:39456951-39456952 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_39456951_TT/-/T chr2:39456951-39456952 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_39761555_C/T chr2:39761555 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_39891830_CC/TT chr2:39891830-39891831 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_40633571_-/AGAT chr2:40633570-40633571 AGAT ENSMUSG00000049252.17 ENSMUST00000052550.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_40633571_-/AGAT chr2:40633570-40633571 AGAT ENSMUSG00000049252.17 ENSMUST00000142546.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_40633571_-/AGAT chr2:40633570-40633571 AGAT ENSMUSG00000049252.17 ENSMUST00000203015.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 - ENSMUSG00000049252.17 ENSMUST00000052550.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 CA ENSMUSG00000049252.17 ENSMUST00000052550.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 - ENSMUSG00000049252.17 ENSMUST00000133104.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 CA ENSMUSG00000049252.17 ENSMUST00000133104.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 - ENSMUSG00000049252.17 ENSMUST00000138700.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 CA ENSMUSG00000049252.17 ENSMUST00000138700.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 - ENSMUSG00000049252.17 ENSMUST00000203080.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 CA ENSMUSG00000049252.17 ENSMUST00000203080.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 - ENSMUSG00000049252.17 ENSMUST00000204204.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42392360_CACA/-/CA chr2:42392360-42392363 CA ENSMUSG00000049252.17 ENSMUST00000204204.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42518261_A/G chr2:42518261 G ENSMUSG00000049252.17 ENSMUST00000052550.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42518261_A/G chr2:42518261 G ENSMUSG00000049252.17 ENSMUST00000133104.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42518261_A/G chr2:42518261 G ENSMUSG00000049252.17 ENSMUST00000138700.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42518261_A/G chr2:42518261 G ENSMUSG00000049252.17 ENSMUST00000203080.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42518261_A/G chr2:42518261 G ENSMUSG00000049252.17 ENSMUST00000204204.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42537127_ATAT/- chr2:42537127-42537130 - ENSMUSG00000049252.17 ENSMUST00000052550.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42537127_ATAT/- chr2:42537127-42537130 - ENSMUSG00000049252.17 ENSMUST00000133104.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42537127_ATAT/- chr2:42537127-42537130 - ENSMUSG00000049252.17 ENSMUST00000138700.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42537127_ATAT/- chr2:42537127-42537130 - ENSMUSG00000049252.17 ENSMUST00000203080.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42537127_ATAT/- chr2:42537127-42537130 - ENSMUSG00000049252.17 ENSMUST00000204204.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_42784539_AAAAAAAAA/- chr2:42784539-42784547 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_43058530_A/T chr2:43058530 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_43330723_-/A chr2:43330722-43330723 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_43404389_G/A chr2:43404389 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_43894711_AAAAAA/- chr2:43894711-43894716 - ENSMUSG00000049744.15 ENSMUST00000055776.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_43894711_AAAAAA/- chr2:43894711-43894716 - ENSMUSG00000049744.15 ENSMUST00000112822.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_43894711_AAAAAA/- chr2:43894711-43894716 - ENSMUSG00000049744.15 ENSMUST00000112824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_43894711_AAAAAA/- chr2:43894711-43894716 - ENSMUSG00000049744.15 ENSMUST00000140528.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000100127.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000112810.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000129240.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000130991.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000133442.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000143766.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000146694.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000148279.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_44848209_-/AAGAA chr2:44848208-44848209 AAGAA ENSMUSG00000036890.13 ENSMUST00000154744.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000028229.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000068415.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000076836.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000127520.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000131635.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000145529.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000153561.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4737;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000176438.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000176732.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000177302.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000200844.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000201211.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000201490.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000201623.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000201804.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000201969.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000202187.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000202371.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45090844_AAA/- chr2:45090844-45090846 - ENSMUSG00000026872.17 ENSMUST00000202935.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_45575512_GAC/G/CAC chr2:45575512-45575514 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_45575512_GAC/G/CAC chr2:45575512-45575514 CAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_46420544_TCTCTC/-/TCTC chr2:46420544-46420549 - ENSMUSG00000086644.1 ENSMUST00000123911.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_46420544_TCTCTC/-/TCTC chr2:46420544-46420549 TCTC ENSMUSG00000086644.1 ENSMUST00000123911.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_46516525_C/T chr2:46516525 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_46870072_ACAC/- chr2:46870072-46870075 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_46927147_G/C chr2:46927147 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_47325911_TCTCTC/- chr2:47325911-47325916 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_47484967_GTGTGTGTGTGT/-/GTGTGTGTGT chr2:47484967-47484978 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_47484967_GTGTGTGTGTGT/-/GTGTGTGTGT chr2:47484967-47484978 GTGTGTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_48059606_C/A chr2:48059606 A ENSMUSG00000086353.1 ENSMUST00000127672.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2942;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_48306943_TT/-/T chr2:48306943-48306944 - ENSMUSG00000086353.1 ENSMUST00000127672.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_48306943_TT/-/T chr2:48306943-48306944 T ENSMUSG00000086353.1 ENSMUST00000127672.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_48318374_TT/- chr2:48318374-48318375 - ENSMUSG00000086353.1 ENSMUST00000127672.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_49372552_-/CCCCCC chr2:49372551-49372552 CCCCCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 - ENSMUSG00000050447.15 ENSMUST00000053208.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 GAGA ENSMUSG00000050447.15 ENSMUST00000053208.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 GAGAGA ENSMUSG00000050447.15 ENSMUST00000053208.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 - ENSMUSG00000050447.15 ENSMUST00000112712.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 GAGA ENSMUSG00000050447.15 ENSMUST00000112712.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 GAGAGA ENSMUSG00000050447.15 ENSMUST00000112712.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 - ENSMUSG00000050447.15 ENSMUST00000128451.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 GAGA ENSMUSG00000050447.15 ENSMUST00000128451.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50074114_GAGAGAGA/-/GAGA/GAGAGA chr2:50074114-50074121 GAGAGA ENSMUSG00000050447.15 ENSMUST00000128451.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_50460069_TT/- chr2:50460069-50460070 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_51149562_-/TATCTATCTATC chr2:51149561-51149562 TATCTATCTATC ENSMUSG00000017144.8 ENSMUST00000017288.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=450;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_51149562_-/TATCTATCTATC chr2:51149561-51149562 TATCTATCTATC ENSMUSG00000017144.8 ENSMUST00000140864.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=467;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_51149562_-/TATCTATCTATC chr2:51149561-51149562 TATCTATCTATC ENSMUSG00000017144.8 ENSMUST00000154545.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=451;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_51149642_TCTA/- chr2:51149642-51149645 - ENSMUSG00000017144.8 ENSMUST00000017288.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=531;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_51149642_TCTA/- chr2:51149642-51149645 - ENSMUSG00000017144.8 ENSMUST00000140864.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=548;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_51149642_TCTA/- chr2:51149642-51149645 - ENSMUSG00000017144.8 ENSMUST00000154545.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=532;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_51598053_ACAC/- chr2:51598053-51598056 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_52090102_T/G chr2:52090102 G ENSMUSG00000036202.16 ENSMUST00000112693.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52090102_T/G chr2:52090102 G ENSMUSG00000036202.16 ENSMUST00000125116.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3093;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52090102_T/G chr2:52090102 G ENSMUSG00000036202.16 ENSMUST00000145130.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52542038_A/G chr2:52542038 G ENSMUSG00000017412.15 ENSMUST00000078324.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52542038_A/G chr2:52542038 G ENSMUSG00000017412.15 ENSMUST00000102760.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52542038_A/G chr2:52542038 G ENSMUSG00000017412.15 ENSMUST00000102761.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52542038_A/G chr2:52542038 G ENSMUSG00000017412.15 ENSMUST00000178799.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52731967_-/T chr2:52731966-52731967 T ENSMUSG00000055371.17 ENSMUST00000102759.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52731967_-/T chr2:52731966-52731967 T ENSMUSG00000055371.17 ENSMUST00000127316.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52731967_-/T chr2:52731966-52731967 T ENSMUSG00000055371.17 ENSMUST00000138290.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52731967_-/T chr2:52731966-52731967 T ENSMUSG00000055371.17 ENSMUST00000150582.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52731967_-/T chr2:52731966-52731967 T ENSMUSG00000055371.17 ENSMUST00000155516.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 - ENSMUSG00000036053.17 ENSMUST00000049483.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 TT ENSMUSG00000036053.17 ENSMUST00000049483.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 - ENSMUSG00000036053.17 ENSMUST00000050719.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 TT ENSMUSG00000036053.17 ENSMUST00000050719.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 - ENSMUSG00000036053.17 ENSMUST00000090952.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 TT ENSMUSG00000036053.17 ENSMUST00000090952.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 - ENSMUSG00000036053.17 ENSMUST00000127122.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 TT ENSMUSG00000036053.17 ENSMUST00000127122.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 - ENSMUSG00000036053.17 ENSMUST00000155586.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_52988963_TTT/-/TT chr2:52988963-52988965 TT ENSMUSG00000036053.17 ENSMUST00000155586.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_53001451_ACAC/- chr2:53001451-53001454 - ENSMUSG00000036053.17 ENSMUST00000049483.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_53001451_ACAC/- chr2:53001451-53001454 - ENSMUSG00000036053.17 ENSMUST00000050719.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_53001451_ACAC/- chr2:53001451-53001454 - ENSMUSG00000036053.17 ENSMUST00000090952.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_53001451_ACAC/- chr2:53001451-53001454 - ENSMUSG00000036053.17 ENSMUST00000127122.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_53001451_ACAC/- chr2:53001451-53001454 - ENSMUSG00000036053.17 ENSMUST00000155586.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_53456042_G/A chr2:53456042 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_53466312_AA/- chr2:53466312-53466313 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_54045587_GGAG/- chr2:54045587-54045590 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_54065184_A/G chr2:54065184 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_54741834_G/A chr2:54741834 A ENSMUSG00000060988.12 ENSMUST00000068595.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_54741834_G/A chr2:54741834 A ENSMUSG00000060988.12 ENSMUST00000112634.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_54741834_G/A chr2:54741834 A ENSMUSG00000060988.12 ENSMUST00000112635.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_54741834_G/A chr2:54741834 A ENSMUSG00000060988.12 ENSMUST00000112636.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_55629066_T/G chr2:55629066 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_55713723_T/A chr2:55713723 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_56192005_-/AAAAG chr2:56192004-56192005 AAAAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_56368189_G/T chr2:56368189 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_56553779_ATAT/- chr2:56553779-56553782 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_56789739_TTTC/- chr2:56789739-56789742 - ENSMUSG00000098437.1 ENSMUST00000184814.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3832;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_57459561_ACAC/- chr2:57459561-57459564 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_59397473_-/AAGA chr2:59397472-59397473 AAGA ENSMUSG00000080982.1 ENSMUST00000118339.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1513;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_59397473_-/AAGA chr2:59397472-59397473 AAGA ENSMUSG00000083276.1 ENSMUST00000121286.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=555;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_59486013_TT/-/T chr2:59486013-59486014 - ENSMUSG00000026989.5 ENSMUST00000028369.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_59486013_TT/-/T chr2:59486013-59486014 T ENSMUSG00000026989.5 ENSMUST00000028369.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_59486013_TT/-/T chr2:59486013-59486014 - ENSMUSG00000026989.5 ENSMUST00000144415.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_59486013_TT/-/T chr2:59486013-59486014 T ENSMUSG00000026989.5 ENSMUST00000144415.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_60287953_GTGT/-/GT chr2:60287953-60287956 - ENSMUSG00000060703.12 ENSMUST00000028356.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3535;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_60287953_GTGT/-/GT chr2:60287953-60287956 GT ENSMUSG00000060703.12 ENSMUST00000028356.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3535;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_60287953_GTGT/-/GT chr2:60287953-60287956 - ENSMUSG00000060703.12 ENSMUST00000074606.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3465;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_60287953_GTGT/-/GT chr2:60287953-60287956 GT ENSMUSG00000060703.12 ENSMUST00000074606.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3465;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_60287953_GTGT/-/GT chr2:60287953-60287956 - ENSMUSG00000026980.15 ENSMUST00000112533.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4147;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_60287953_GTGT/-/GT chr2:60287953-60287956 GT ENSMUSG00000026980.15 ENSMUST00000112533.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4147;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_61171874_ACAC/-/AC chr2:61171874-61171877 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_61171874_ACAC/-/AC chr2:61171874-61171877 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_61503478_TGTG/- chr2:61503478-61503481 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_61567419_AA/- chr2:61567419-61567420 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_61945784_CTCT/- chr2:61945784-61945787 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_62343104_GTGT/-/GT chr2:62343104-62343107 - ENSMUSG00000035000.8 ENSMUST00000047812.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62343104_GTGT/-/GT chr2:62343104-62343107 GT ENSMUSG00000035000.8 ENSMUST00000047812.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62343104_GTGT/-/GT chr2:62343104-62343107 - ENSMUSG00000035000.8 ENSMUST00000156871.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62343104_GTGT/-/GT chr2:62343104-62343107 GT ENSMUSG00000035000.8 ENSMUST00000156871.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000000402.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000000402.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000102732.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000102732.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000136297.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000136297.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000152085.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000152085.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000172676.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000172676.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000173745.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000173745.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000174234.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000174234.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 - ENSMUSG00000000392.17 ENSMUST00000174448.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62562234_GTGT/-/GT chr2:62562234-62562237 GT ENSMUSG00000000392.17 ENSMUST00000174448.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62771496_TGTG/- chr2:62771496-62771499 - ENSMUSG00000059742.10 ENSMUST00000075052.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_62776499_AA/- chr2:62776499-62776500 - ENSMUSG00000059742.10 ENSMUST00000075052.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_63564778_T/A chr2:63564778 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_63705001_TGTG/- chr2:63705001-63705004 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_65529278_AAA/- chr2:65529278-65529280 - ENSMUSG00000057182.14 ENSMUST00000066432.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_65529278_AAA/- chr2:65529278-65529280 - ENSMUSG00000057182.14 ENSMUST00000100069.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_65529278_AAA/- chr2:65529278-65529280 - ENSMUSG00000057182.14 ENSMUST00000126837.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_65550320_AGAG/-/AG chr2:65550320-65550323 - ENSMUSG00000057182.14 ENSMUST00000066432.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_65550320_AGAG/-/AG chr2:65550320-65550323 AG ENSMUSG00000057182.14 ENSMUST00000066432.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_65550320_AGAG/-/AG chr2:65550320-65550323 - ENSMUSG00000057182.14 ENSMUST00000100069.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_65550320_AGAG/-/AG chr2:65550320-65550323 AG ENSMUSG00000057182.14 ENSMUST00000100069.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_66179751_ACAC/- chr2:66179751-66179754 - ENSMUSG00000034848.17 ENSMUST00000102718.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4573;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_66179751_ACAC/- chr2:66179751-66179754 - ENSMUSG00000034848.17 ENSMUST00000125446.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_66179751_ACAC/- chr2:66179751-66179754 - ENSMUSG00000100197.1 ENSMUST00000188152.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4501;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_68847202_T/A chr2:68847202 A ENSMUSG00000109667.1 ENSMUST00000211183.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1950;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_68906505_GTGT/- chr2:68906505-68906508 - ENSMUSG00000027035.10 ENSMUST00000028426.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_68906505_GTGT/- chr2:68906505-68906508 - ENSMUSG00000027035.10 ENSMUST00000141983.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_68906505_GTGT/- chr2:68906505-68906508 - ENSMUSG00000027035.10 ENSMUST00000175684.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_68906505_GTGT/- chr2:68906505-68906508 - ENSMUSG00000027035.10 ENSMUST00000176018.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_68906505_GTGT/- chr2:68906505-68906508 - ENSMUSG00000103747.1 ENSMUST00000192661.1 Transcript non_coding_transcript_exon_variant 503-506 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69130809_GTGT/-/GT chr2:69130809-69130812 - ENSMUSG00000034738.8 ENSMUST00000041865.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4988;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69130809_GTGT/-/GT chr2:69130809-69130812 GT ENSMUSG00000034738.8 ENSMUST00000041865.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4988;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69272743_GAGAGA/- chr2:69272743-69272748 - ENSMUSG00000027048.15 ENSMUST00000102709.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69272743_GAGAGA/- chr2:69272743-69272748 - ENSMUSG00000027048.15 ENSMUST00000102710.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69272743_GAGAGA/- chr2:69272743-69272748 - ENSMUSG00000086819.1 ENSMUST00000126240.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=252;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69272743_GAGAGA/- chr2:69272743-69272748 - ENSMUSG00000027048.15 ENSMUST00000180142.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69522648_-/A chr2:69522647-69522648 A ENSMUSG00000027070.14 ENSMUST00000080953.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69522648_-/A chr2:69522647-69522648 A ENSMUSG00000027070.14 ENSMUST00000092551.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3718;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69522648_-/A chr2:69522647-69522648 A ENSMUSG00000027070.14 ENSMUST00000100051.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 - ENSMUSG00000063145.10 ENSMUST00000074963.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 AAA ENSMUSG00000063145.10 ENSMUST00000074963.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 - ENSMUSG00000063145.10 ENSMUST00000112286.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 AAA ENSMUSG00000063145.10 ENSMUST00000112286.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 - ENSMUSG00000063145.10 ENSMUST00000127806.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 AAA ENSMUSG00000063145.10 ENSMUST00000127806.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 - ENSMUSG00000063145.10 ENSMUST00000134659.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 AAA ENSMUSG00000063145.10 ENSMUST00000134659.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 - ENSMUSG00000063145.10 ENSMUST00000143165.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 AAA ENSMUSG00000063145.10 ENSMUST00000143165.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 - ENSMUSG00000063145.10 ENSMUST00000144240.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4840;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69659088_AA/-/AAA chr2:69659088-69659089 AAA ENSMUSG00000063145.10 ENSMUST00000144240.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4840;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69849065_AAA/-/A/AA/AAAA chr2:69849065-69849067 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_69849065_AAA/-/A/AA/AAAA chr2:69849065-69849067 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_69849065_AAA/-/A/AA/AAAA chr2:69849065-69849067 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_69849065_AAA/-/A/AA/AAAA chr2:69849065-69849067 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_69929627_T/C chr2:69929627 C ENSMUSG00000044308.17 ENSMUST00000055758.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69929627_T/C chr2:69929627 C ENSMUSG00000044308.17 ENSMUST00000112251.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69929627_T/C chr2:69929627 C ENSMUSG00000044308.17 ENSMUST00000131553.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69930372_C/G chr2:69930372 G ENSMUSG00000044308.17 ENSMUST00000055758.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69930372_C/G chr2:69930372 G ENSMUSG00000044308.17 ENSMUST00000112251.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_69930372_C/G chr2:69930372 G ENSMUSG00000044308.17 ENSMUST00000131553.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70007211_TT/- chr2:70007211-70007212 - ENSMUSG00000044308.17 ENSMUST00000055758.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70007211_TT/- chr2:70007211-70007212 - ENSMUSG00000044308.17 ENSMUST00000112251.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70007211_TT/- chr2:70007211-70007212 - ENSMUSG00000044308.17 ENSMUST00000125608.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70007211_TT/- chr2:70007211-70007212 - ENSMUSG00000044308.17 ENSMUST00000126165.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70007211_TT/- chr2:70007211-70007212 - ENSMUSG00000044308.17 ENSMUST00000150301.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1795;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70007211_TT/- chr2:70007211-70007212 - ENSMUSG00000044308.17 ENSMUST00000152610.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70641301_TGTG/- chr2:70641301-70641304 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 - ENSMUSG00000041997.16 ENSMUST00000038584.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 TTTT ENSMUSG00000041997.16 ENSMUST00000038584.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 - ENSMUSG00000041997.16 ENSMUST00000124629.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 TTTT ENSMUSG00000041997.16 ENSMUST00000124629.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 - ENSMUSG00000041997.16 ENSMUST00000132542.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 TTTT ENSMUSG00000041997.16 ENSMUST00000132542.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 - ENSMUSG00000041997.16 ENSMUST00000133734.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 TTTT ENSMUSG00000041997.16 ENSMUST00000133734.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 - ENSMUSG00000041997.16 ENSMUST00000135128.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70768225_TTTTT/-/TTTT chr2:70768225-70768229 TTTT ENSMUSG00000041997.16 ENSMUST00000135128.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000090849.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000100037.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000112179.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000112186.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000121586.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000124208.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=119;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000124781.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4278;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000148876.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_70980937_AGAG/- chr2:70980937-70980940 - ENSMUSG00000041975.17 ENSMUST00000149181.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 - ENSMUSG00000027010.16 ENSMUST00000126493.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 AAA ENSMUSG00000027010.16 ENSMUST00000126493.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 - ENSMUSG00000027010.16 ENSMUST00000146653.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2791;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 AAA ENSMUSG00000027010.16 ENSMUST00000146653.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2791;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 - ENSMUSG00000027010.16 ENSMUST00000151937.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 AAA ENSMUSG00000027010.16 ENSMUST00000151937.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 - ENSMUSG00000027010.16 ENSMUST00000184169.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71341098_AA/-/AAA chr2:71341098-71341099 AAA ENSMUSG00000027010.16 ENSMUST00000184169.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71350552_GTGTGTGTGTGTGTGTGTGTGTGT/- chr2:71350552-71350575 - ENSMUSG00000027010.16 ENSMUST00000146653.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2724;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71350552_GTGTGTGTGTGTGTGTGTGTGTGT/- chr2:71350552-71350575 - ENSMUSG00000027010.16 ENSMUST00000151937.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_71350552_GTGTGTGTGTGTGTGTGTGTGTGT/- chr2:71350552-71350575 - ENSMUSG00000027010.16 ENSMUST00000184169.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72128056_-/TATC chr2:72128055-72128056 TATC ENSMUSG00000049044.16 ENSMUST00000028525.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72128056_-/TATC chr2:72128055-72128056 TATC ENSMUSG00000049044.16 ENSMUST00000090826.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72128056_-/TATC chr2:72128055-72128056 TATC ENSMUSG00000049044.16 ENSMUST00000102698.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72128056_-/TATC chr2:72128055-72128056 TATC ENSMUSG00000049044.16 ENSMUST00000124004.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72128056_-/TATC chr2:72128055-72128056 TATC ENSMUSG00000085439.1 ENSMUST00000126462.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72128056_-/TATC chr2:72128055-72128056 TATC ENSMUSG00000049044.16 ENSMUST00000150234.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 - ENSMUSG00000049044.16 ENSMUST00000028525.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CA ENSMUSG00000049044.16 ENSMUST00000028525.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CACACA ENSMUSG00000049044.16 ENSMUST00000028525.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 - ENSMUSG00000049044.16 ENSMUST00000090826.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CA ENSMUSG00000049044.16 ENSMUST00000090826.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CACACA ENSMUSG00000049044.16 ENSMUST00000090826.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 - ENSMUSG00000049044.16 ENSMUST00000102698.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CA ENSMUSG00000049044.16 ENSMUST00000102698.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CACACA ENSMUSG00000049044.16 ENSMUST00000102698.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 - ENSMUSG00000086231.1 ENSMUST00000132792.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2679;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CA ENSMUSG00000086231.1 ENSMUST00000132792.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2679;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CACACA ENSMUSG00000086231.1 ENSMUST00000132792.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2679;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 - ENSMUSG00000049044.16 ENSMUST00000146970.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CA ENSMUSG00000049044.16 ENSMUST00000146970.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CACACA ENSMUSG00000049044.16 ENSMUST00000146970.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 - ENSMUSG00000049044.16 ENSMUST00000153887.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CA ENSMUSG00000049044.16 ENSMUST00000153887.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72251654_CACA/-/CA/CACACA chr2:72251654-72251657 CACACA ENSMUSG00000049044.16 ENSMUST00000153887.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_72626593_ACAC/- chr2:72626593-72626596 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_73390934_TTT/-/TT chr2:73390934-73390936 - ENSMUSG00000041762.16 ENSMUST00000048504.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4536;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 TT ENSMUSG00000041762.16 ENSMUST00000048504.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4536;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 - ENSMUSG00000041762.16 ENSMUST00000076463.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4362;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 TT ENSMUSG00000041762.16 ENSMUST00000076463.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4362;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 - ENSMUSG00000041762.16 ENSMUST00000112043.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4491;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 TT ENSMUSG00000041762.16 ENSMUST00000112043.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4491;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 - ENSMUSG00000041762.16 ENSMUST00000112044.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4522;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 TT ENSMUSG00000041762.16 ENSMUST00000112044.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4522;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 - ENSMUSG00000041762.16 ENSMUST00000134595.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4523;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 TT ENSMUSG00000041762.16 ENSMUST00000134595.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4523;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 - ENSMUSG00000087176.1 ENSMUST00000144735.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 TT ENSMUSG00000087176.1 ENSMUST00000144735.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 - ENSMUSG00000041762.16 ENSMUST00000184503.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4536;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73390934_TTT/-/TT chr2:73390934-73390936 TT ENSMUSG00000041762.16 ENSMUST00000184503.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4536;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_73945742_TCCCTCTCCCTCTCCCTCTCCCCTCCCCCTCCCCCTCTCCCTCTCCCCTCCCCCTCCCCCTT/- chr2:73945742-73945803 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_74599533_GTGT/-/GT chr2:74599533-74599536 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_74599533_GTGT/-/GT chr2:74599533-74599536 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 - ENSMUSG00000051747.14 ENSMUST00000011934.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 CACACACA ENSMUSG00000051747.14 ENSMUST00000011934.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 - ENSMUSG00000051747.14 ENSMUST00000099981.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 CACACACA ENSMUSG00000051747.14 ENSMUST00000099981.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 - ENSMUSG00000051747.14 ENSMUST00000111846.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 CACACACA ENSMUSG00000051747.14 ENSMUST00000111846.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 - ENSMUSG00000051747.14 ENSMUST00000111882.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 CACACACA ENSMUSG00000051747.14 ENSMUST00000111882.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 - ENSMUSG00000051747.14 ENSMUST00000134720.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 CACACACA ENSMUSG00000051747.14 ENSMUST00000134720.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 - ENSMUSG00000051747.14 ENSMUST00000139832.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4946;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 CACACACA ENSMUSG00000051747.14 ENSMUST00000139832.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4946;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 - ENSMUSG00000051747.14 ENSMUST00000148747.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_76883800_CACACA/-/CACACACA chr2:76883800-76883805 CACACACA ENSMUSG00000051747.14 ENSMUST00000148747.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 - ENSMUSG00000044033.16 ENSMUST00000028406.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 A ENSMUSG00000044033.16 ENSMUST00000028406.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 - ENSMUSG00000044033.16 ENSMUST00000049544.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 A ENSMUSG00000044033.16 ENSMUST00000049544.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 - ENSMUSG00000044033.16 ENSMUST00000131660.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 A ENSMUSG00000044033.16 ENSMUST00000131660.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 - ENSMUSG00000044033.16 ENSMUST00000164114.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77121846_AA/-/A chr2:77121846-77121847 A ENSMUSG00000044033.16 ENSMUST00000164114.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000065889.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=590;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000111818.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=612;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000111819.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=782;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000111821.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=612;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000111824.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=785;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000127289.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1027;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000127351.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=782;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000128963.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=776;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_77946966_-/AG chr2:77946965-77946966 AG ENSMUSG00000027014.14 ENSMUST00000144727.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=766;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_79108655_GTGTGTGTGAGTGTGTGTGTGTGTGA/- chr2:79108655-79108680 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_79400592_C/T chr2:79400592 T ENSMUSG00000075256.9 ENSMUST00000099974.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_79400592_C/T chr2:79400592 T ENSMUSG00000075256.9 ENSMUST00000123859.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_79400592_C/T chr2:79400592 T ENSMUSG00000075256.9 ENSMUST00000143602.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_79400592_C/T chr2:79400592 T ENSMUSG00000075256.9 ENSMUST00000143974.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_79400592_C/T chr2:79400592 T ENSMUSG00000075256.9 ENSMUST00000152549.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_79400592_C/T chr2:79400592 T ENSMUSG00000075256.9 ENSMUST00000153602.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_80144203_GTGT/- chr2:80144203-80144206 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_80431506_AAA/- chr2:80431506-80431508 - ENSMUSG00000027004.3 ENSMUST00000028389.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_80431506_AAA/- chr2:80431506-80431508 - ENSMUSG00000027004.3 ENSMUST00000142459.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_80730385_TGTG/-/TG chr2:80730385-80730388 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_80730385_TGTG/-/TG chr2:80730385-80730388 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_80914818_TCTC/- chr2:80914818-80914821 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_81438695_CA/C/AA chr2:81438695-81438696 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_81438695_CA/C/AA chr2:81438695-81438696 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_83061296_AAAA/-/AAAAAAAAAAAAAA chr2:83061296-83061299 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_83061296_AAAA/-/AAAAAAAAAAAAAA chr2:83061296-83061299 AAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_83106033_CACACA/-/CACA chr2:83106033-83106038 - ENSMUSG00000102082.1 ENSMUST00000191096.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_83106033_CACACA/-/CACA chr2:83106033-83106038 CACA ENSMUSG00000102082.1 ENSMUST00000191096.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84032773_TT/- chr2:84032773-84032774 - ENSMUSG00000084359.1 ENSMUST00000120774.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1469;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84135014_A/C chr2:84135014 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_84712881_AAAAA/-/AAAAAA chr2:84712881-84712885 - ENSMUSG00000034075.10 ENSMUST00000035840.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84712881_AAAAA/-/AAAAAA chr2:84712881-84712885 AAAAAA ENSMUSG00000034075.10 ENSMUST00000035840.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84712881_AAAAA/-/AAAAAA chr2:84712881-84712885 - ENSMUSG00000034075.10 ENSMUST00000125690.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84712881_AAAAA/-/AAAAAA chr2:84712881-84712885 AAAAAA ENSMUSG00000034075.10 ENSMUST00000125690.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84712881_AAAAA/-/AAAAAA chr2:84712881-84712885 - ENSMUSG00000034075.10 ENSMUST00000138171.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84712881_AAAAA/-/AAAAAA chr2:84712881-84712885 AAAAAA ENSMUSG00000034075.10 ENSMUST00000138171.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84771180_AGAA/- chr2:84771180-84771183 - ENSMUSG00000023224.12 ENSMUST00000023994.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84771180_AGAA/- chr2:84771180-84771183 - ENSMUSG00000023224.12 ENSMUST00000111641.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84771180_AGAA/- chr2:84771180-84771183 - ENSMUSG00000023224.12 ENSMUST00000131456.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1948;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_84971657_ACAC/- chr2:84971657-84971660 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_85492545_-/TCTA chr2:85492544-85492545 TCTA ENSMUSG00000075217.1 ENSMUST00000099923.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_85791142_T/- chr2:85791142 - ENSMUSG00000033850.5 ENSMUST00000047870.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4653;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_85791142_T/- chr2:85791142 - ENSMUSG00000033850.5 ENSMUST00000214726.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3330;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_85791142_T/- chr2:85791142 - ENSMUSG00000033850.5 ENSMUST00000215945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3330;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_86927367_G/- chr2:86927367 - ENSMUSG00000075169.5 ENSMUST00000099872.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3837;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_86927367_G/- chr2:86927367 - ENSMUSG00000075169.5 ENSMUST00000111574.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2822;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87063275_C/A chr2:87063275 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_87326368_GA/AG chr2:87326368-87326369 AG ENSMUSG00000083211.1 ENSMUST00000119793.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2372;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87326374_A/G chr2:87326374 G ENSMUSG00000083211.1 ENSMUST00000119793.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2378;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87518488_T/C chr2:87518488 C ENSMUSG00000083267.2 ENSMUST00000119555.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4994;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87518488_T/C chr2:87518488 C ENSMUSG00000081762.1 ENSMUST00000122437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=988;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87520402_AA/-/A/AAA chr2:87520402-87520403 - ENSMUSG00000083267.2 ENSMUST00000119555.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3079;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87520402_AA/-/A/AAA chr2:87520402-87520403 A ENSMUSG00000083267.2 ENSMUST00000119555.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3079;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87520402_AA/-/A/AAA chr2:87520402-87520403 AAA ENSMUSG00000083267.2 ENSMUST00000119555.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3079;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87520402_AA/-/A/AAA chr2:87520402-87520403 - ENSMUSG00000081762.1 ENSMUST00000122437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2902;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87520402_AA/-/A/AAA chr2:87520402-87520403 A ENSMUSG00000081762.1 ENSMUST00000122437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2902;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_87520402_AA/-/A/AAA chr2:87520402-87520403 AAA ENSMUSG00000081762.1 ENSMUST00000122437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2902;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_88969707_T/C chr2:88969707 C ENSMUSG00000075111.11 ENSMUST00000144908.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2348;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_88969707_T/C chr2:88969707 C ENSMUSG00000075111.11 ENSMUST00000168169.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2348;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000037206.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000037219.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000051831.12 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000111481.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000136058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000149037.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000149361.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791745_TCTGTA/- chr2:90791745-90791750 - ENSMUSG00000040812.14 ENSMUST00000170320.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000037206.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000037219.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000051831.12 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000111481.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000136058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000149037.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000149361.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90791760_C/G chr2:90791760 G ENSMUSG00000040812.14 ENSMUST00000170320.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_90934369_CTCT/- chr2:90934369-90934372 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_91326132_GTGT/- chr2:91326132-91326135 - ENSMUSG00000040591.18 ENSMUST00000064652.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91326132_GTGT/- chr2:91326132-91326135 - ENSMUSG00000040591.18 ENSMUST00000094835.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91326132_GTGT/- chr2:91326132-91326135 - ENSMUSG00000040591.18 ENSMUST00000102594.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91326132_GTGT/- chr2:91326132-91326135 - ENSMUSG00000040591.18 ENSMUST00000145573.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91500503_-/A chr2:91500502-91500503 A ENSMUSG00000027253.15 ENSMUST00000028689.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91690402_ACAC/- chr2:91690402-91690405 - ENSMUSG00000027244.14 ENSMUST00000028678.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91690402_ACAC/- chr2:91690402-91690405 - ENSMUSG00000027244.14 ENSMUST00000076803.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91690402_ACAC/- chr2:91690402-91690405 - ENSMUSG00000027244.14 ENSMUST00000136412.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91914383_C/T chr2:91914383 T ENSMUSG00000040506.16 ENSMUST00000045699.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91914383_C/T chr2:91914383 T ENSMUSG00000040506.16 ENSMUST00000045705.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91914383_C/T chr2:91914383 T ENSMUSG00000040506.16 ENSMUST00000099712.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91914383_C/T chr2:91914383 T ENSMUSG00000040506.16 ENSMUST00000111316.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_91914383_C/T chr2:91914383 T ENSMUSG00000040506.16 ENSMUST00000111317.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_92615151_AA/-/A/AAA chr2:92615151-92615152 - ENSMUSG00000027221.5 ENSMUST00000065797.6 Transcript 3_prime_UTR_variant 2581-2582 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_92615151_AA/-/A/AAA chr2:92615151-92615152 A ENSMUSG00000027221.5 ENSMUST00000065797.6 Transcript 3_prime_UTR_variant 2581-2582 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_92615151_AA/-/A/AAA chr2:92615151-92615152 AAA ENSMUSG00000027221.5 ENSMUST00000065797.6 Transcript 3_prime_UTR_variant 2581-2582 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_92682487_C/T chr2:92682487 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_92814783_GTGT/-/GT chr2:92814783-92814786 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_92814783_GTGT/-/GT chr2:92814783-92814786 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_93063370_ACAC/- chr2:93063370-93063373 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_93728504_CACA/-/CA chr2:93728504-93728507 - ENSMUSG00000027198.16 ENSMUST00000028623.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_93728504_CACA/-/CA chr2:93728504-93728507 CA ENSMUSG00000027198.16 ENSMUST00000028623.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_93728504_CACA/-/CA chr2:93728504-93728507 - ENSMUSG00000027198.16 ENSMUST00000123649.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_93728504_CACA/-/CA chr2:93728504-93728507 CA ENSMUSG00000027198.16 ENSMUST00000123649.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_93728504_CACA/-/CA chr2:93728504-93728507 - ENSMUSG00000027198.16 ENSMUST00000125407.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_93728504_CACA/-/CA chr2:93728504-93728507 CA ENSMUSG00000027198.16 ENSMUST00000125407.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_93728504_CACA/-/CA chr2:93728504-93728507 - ENSMUSG00000027198.16 ENSMUST00000184931.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_93728504_CACA/-/CA chr2:93728504-93728507 CA ENSMUSG00000027198.16 ENSMUST00000184931.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94198086_GTGT/- chr2:94198086-94198089 - ENSMUSG00000075020.6 ENSMUST00000210851.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94198086_GTGT/- chr2:94198086-94198089 - ENSMUSG00000075020.6 ENSMUST00000211430.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94242038_TT/- chr2:94242038-94242039 - ENSMUSG00000065511.1 ENSMUST00000083577.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94242038_TT/- chr2:94242038-94242039 - ENSMUSG00000106336.1 ENSMUST00000197461.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=596;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94242038_TT/- chr2:94242038-94242039 - ENSMUSG00000075020.6 ENSMUST00000210721.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94242038_TT/- chr2:94242038-94242039 - ENSMUSG00000075020.6 ENSMUST00000210851.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94242038_TT/- chr2:94242038-94242039 - ENSMUSG00000075020.6 ENSMUST00000211430.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_94855546_G/A chr2:94855546 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_96008686_-/A chr2:96008685-96008686 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_96450518_TGTG/- chr2:96450518-96450521 - ENSMUSG00000050587.14 ENSMUST00000135431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_96450518_TGTG/- chr2:96450518-96450521 - ENSMUSG00000050587.14 ENSMUST00000162807.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97058897_A/T chr2:97058897 T ENSMUSG00000050587.14 ENSMUST00000135431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97058897_A/T chr2:97058897 T ENSMUSG00000050587.14 ENSMUST00000162807.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97058897_A/T chr2:97058897 T ENSMUSG00000091061.1 ENSMUST00000170085.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97202812_TGTG/-/TG chr2:97202812-97202815 - ENSMUSG00000050587.14 ENSMUST00000135431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97202812_TGTG/-/TG chr2:97202812-97202815 TG ENSMUSG00000050587.14 ENSMUST00000135431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97202812_TGTG/-/TG chr2:97202812-97202815 - ENSMUSG00000050587.14 ENSMUST00000162807.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97202812_TGTG/-/TG chr2:97202812-97202815 TG ENSMUSG00000050587.14 ENSMUST00000162807.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_97741213_C/T chr2:97741213 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_97838414_G/A chr2:97838414 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_98019437_-/C chr2:98019436-98019437 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_98037307_CAA/C/CA/AAA chr2:98037307-98037309 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_98037307_CAA/C/CA/AAA chr2:98037307-98037309 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_98037307_CAA/C/CA/AAA chr2:98037307-98037309 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_98426507_ACAC/- chr2:98426507-98426510 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_99111214_G/A chr2:99111214 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_99565161_AAA/-/AA chr2:99565161-99565163 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_99565161_AAA/-/AA chr2:99565161-99565163 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_99885614_AACACAC/A/AACAC/CACACAC chr2:99885614-99885620 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_99885614_AACACAC/A/AACAC/CACACAC chr2:99885614-99885620 AACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_99885614_AACACAC/A/AACAC/CACACAC chr2:99885614-99885620 CACACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_99980463_T/A chr2:99980463 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_101004783_TGTG/-/TG chr2:101004783-101004786 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_101004783_TGTG/-/TG chr2:101004783-101004786 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_101458513_AA/- chr2:101458513-101458514 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_102010768_-/ACAC chr2:102010767-102010768 ACAC ENSMUSG00000048058.17 ENSMUST00000058790.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102010768_-/ACAC chr2:102010767-102010768 ACAC ENSMUSG00000048058.17 ENSMUST00000111222.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065661_-/C chr2:102065660-102065661 C ENSMUSG00000048058.17 ENSMUST00000058790.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065661_-/C chr2:102065660-102065661 C ENSMUSG00000048058.17 ENSMUST00000111222.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065661_-/C chr2:102065660-102065661 C ENSMUSG00000085417.1 ENSMUST00000140238.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065661_-/C chr2:102065660-102065661 C ENSMUSG00000085110.1 ENSMUST00000146134.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4230;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065674_-/CCCCCCCCCCCCT chr2:102065673-102065674 CCCCCCCCCCCCT ENSMUSG00000048058.17 ENSMUST00000058790.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065674_-/CCCCCCCCCCCCT chr2:102065673-102065674 CCCCCCCCCCCCT ENSMUSG00000048058.17 ENSMUST00000111222.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065674_-/CCCCCCCCCCCCT chr2:102065673-102065674 CCCCCCCCCCCCT ENSMUSG00000085417.1 ENSMUST00000140238.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102065674_-/CCCCCCCCCCCCT chr2:102065673-102065674 CCCCCCCCCCCCT ENSMUSG00000085110.1 ENSMUST00000146134.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4243;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_102416991_C/T chr2:102416991 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027184.14 ENSMUST00000028607.12 Transcript 3_prime_UTR_variant 6119 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000028608.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1721;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027184.14 ENSMUST00000111147.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2027;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000127581.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1730;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000133016.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1750;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000137050.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1750;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000140895.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2065;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000143017.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1794;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027184.14 ENSMUST00000143349.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4116;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000144590.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1787;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000145189.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1721;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027184.14 ENSMUST00000145606.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4821;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000148798.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4575;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_103762991_C/- chr2:103762991 - ENSMUSG00000027185.15 ENSMUST00000165970.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1796;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_104393491_TATA/- chr2:104393491-104393494 - ENSMUSG00000068373.15 ENSMUST00000089726.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_104393491_TATA/- chr2:104393491-104393494 - ENSMUSG00000068373.15 ENSMUST00000136156.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_104393491_TATA/- chr2:104393491-104393494 - ENSMUSG00000068373.15 ENSMUST00000141159.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_104393491_TATA/- chr2:104393491-104393494 - ENSMUSG00000068373.15 ENSMUST00000230671.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_104855082_TTTT/-/TTT chr2:104855082-104855085 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_104855082_TTTT/-/TTT chr2:104855082-104855085 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_105029519_ACAC/- chr2:105029519-105029522 - ENSMUSG00000083487.1 ENSMUST00000119148.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2344;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105297378_TGTG/- chr2:105297378-105297381 - ENSMUSG00000055312.2 ENSMUST00000068813.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105297378_TGTG/- chr2:105297378-105297381 - ENSMUSG00000055312.2 ENSMUST00000131060.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105382416_TT/- chr2:105382416-105382417 - ENSMUSG00000005973.6 ENSMUST00000006128.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3874;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105382416_TT/- chr2:105382416-105382417 - ENSMUSG00000055312.2 ENSMUST00000068813.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2620;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105382416_TT/- chr2:105382416-105382417 - ENSMUSG00000005973.6 ENSMUST00000127019.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4512;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105382416_TT/- chr2:105382416-105382417 - ENSMUSG00000055312.2 ENSMUST00000131060.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3381;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105651453_AA/- chr2:105651453-105651454 - ENSMUSG00000086029.7 ENSMUST00000126948.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105651453_AA/- chr2:105651453-105651454 - ENSMUSG00000086029.7 ENSMUST00000149133.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105780983_CACA/- chr2:105780983-105780986 - ENSMUSG00000027167.11 ENSMUST00000028588.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105780983_CACA/- chr2:105780983-105780986 - ENSMUSG00000027167.11 ENSMUST00000122965.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105907867_AAAA/- chr2:105907867-105907870 - ENSMUSG00000042670.5 ENSMUST00000037499.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105907867_AAAA/- chr2:105907867-105907870 - ENSMUSG00000027167.11 ENSMUST00000122965.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_105907867_AAAA/- chr2:105907867-105907870 - ENSMUSG00000027167.11 ENSMUST00000148441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3384;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_106381122_GTGT/- chr2:106381122-106381125 - ENSMUSG00000074981.13 ENSMUST00000037284.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2562;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_106381122_GTGT/- chr2:106381122-106381125 - ENSMUSG00000074981.13 ENSMUST00000122388.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_106381122_GTGT/- chr2:106381122-106381125 - ENSMUSG00000074981.13 ENSMUST00000152776.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_106649773_CACA/-/CA chr2:106649773-106649776 - ENSMUSG00000085218.7 ENSMUST00000123623.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_106649773_CACA/-/CA chr2:106649773-106649776 CA ENSMUSG00000085218.7 ENSMUST00000123623.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_106649773_CACA/-/CA chr2:106649773-106649776 - ENSMUSG00000085218.7 ENSMUST00000139514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_106649773_CACA/-/CA chr2:106649773-106649776 CA ENSMUSG00000085218.7 ENSMUST00000139514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_107116071_TTT/-/TT chr2:107116071-107116073 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_107116071_TTT/-/TT chr2:107116071-107116073 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_108489047_TGTG/- chr2:108489047-108489050 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_108908174_A/T chr2:108908174 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_109355393_TAC/T/CAC chr2:109355393-109355395 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_109355393_TAC/T/CAC chr2:109355393-109355395 CAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_109494229_C/A chr2:109494229 A ENSMUSG00000081746.2 ENSMUST00000117315.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_110187630_-/A chr2:110187629-110187630 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_110194812_-/CTAT chr2:110194811-110194812 CTAT ENSMUSG00000085444.1 ENSMUST00000130416.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2077;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_110654908_T/- chr2:110654908 - ENSMUSG00000074968.11 ENSMUST00000099623.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111333060_GAGAGA/- chr2:111333060-111333065 - ENSMUSG00000095156.2 ENSMUST00000090326.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3722;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111333060_GAGAGA/- chr2:111333060-111333065 - ENSMUSG00000096554.1 ENSMUST00000099618.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2094;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111333060_GAGAGA/- chr2:111333060-111333065 - ENSMUSG00000095156.2 ENSMUST00000208176.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=208;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111481539_T/- chr2:111481539 - ENSMUSG00000044039.4 ENSMUST00000104889.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1815;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111481539_T/- chr2:111481539 - ENSMUSG00000061195.8 ENSMUST00000120021.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111481539_T/- chr2:111481539 - ENSMUSG00000061195.8 ENSMUST00000207494.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1811;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111481539_T/- chr2:111481539 - ENSMUSG00000044039.4 ENSMUST00000214816.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1545;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111481539_T/- chr2:111481539 - ENSMUSG00000061195.8 ENSMUST00000225425.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1810;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_111723226_A/G chr2:111723226 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_111936402_G/A chr2:111936402 A ENSMUSG00000094747.3 ENSMUST00000099604.5 Transcript 3_prime_UTR_variant 9296 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112236659_G/A chr2:112236659 A ENSMUSG00000027134.4 ENSMUST00000028554.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2809;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112236659_G/A chr2:112236659 A ENSMUSG00000027134.4 ENSMUST00000136219.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4826;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112833659_C/T chr2:112833659 T ENSMUSG00000057378.15 ENSMUST00000080673.12 Transcript synonymous_variant 5364 5286 1762 T acG/acA - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112833659_C/T chr2:112833659 T ENSMUSG00000057378.15 ENSMUST00000091818.5 Transcript synonymous_variant 5346 5346 1782 T acG/acA - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112833659_C/T chr2:112833659 T ENSMUSG00000057378.15 ENSMUST00000134358.8 Transcript synonymous_variant 5286 5286 1762 T acG/acA - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112833659_C/T chr2:112833659 T ENSMUSG00000057378.15 ENSMUST00000208151.1 Transcript synonymous_variant 5383 5286 1762 T acG/acA - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112833659_C/T chr2:112833659 T ENSMUSG00000057378.15 ENSMUST00000208290.1 Transcript synonymous_variant 5383 5286 1762 T acG/acA - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112918917_AGAG/- chr2:112918917-112918920 - ENSMUSG00000057378.15 ENSMUST00000080673.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112918917_AGAG/- chr2:112918917-112918920 - ENSMUSG00000057378.15 ENSMUST00000091818.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112918917_AGAG/- chr2:112918917-112918920 - ENSMUSG00000057378.15 ENSMUST00000134358.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112918917_AGAG/- chr2:112918917-112918920 - ENSMUSG00000057378.15 ENSMUST00000208151.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_112918917_AGAG/- chr2:112918917-112918920 - ENSMUSG00000057378.15 ENSMUST00000208290.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000080673.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000128192.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000134358.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000156757.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000207603.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000208135.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000208151.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_113214647_GTGTGT/- chr2:113214647-113214652 - ENSMUSG00000057378.15 ENSMUST00000208290.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_114144870_A/C chr2:114144870 C ENSMUSG00000040383.16 ENSMUST00000043160.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_114144870_A/C chr2:114144870 C ENSMUSG00000040383.16 ENSMUST00000102543.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_114144870_A/C chr2:114144870 C ENSMUSG00000040383.16 ENSMUST00000125460.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_114144870_A/C chr2:114144870 C ENSMUSG00000040383.16 ENSMUST00000126701.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3727;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_114350418_ACAC/- chr2:114350418-114350421 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_115544678_-/CCCC chr2:115544677-115544678 CCCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_116283787_TGTG/-/TG chr2:116283787-116283790 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_116283787_TGTG/-/TG chr2:116283787-116283790 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_116537447_G/C chr2:116537447 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_116719809_A/G chr2:116719809 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_116831856_-/CTCTCT chr2:116831855-116831856 CTCTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_116926179_-/GAAA chr2:116926178-116926179 GAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_117173856_T/A chr2:117173856 A ENSMUSG00000027351.14 ENSMUST00000028829.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_117173856_T/A chr2:117173856 A ENSMUSG00000027351.14 ENSMUST00000110901.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1002;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_117683910_T/- chr2:117683910 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_117973919_-/GAA chr2:117973918-117973919 GAA ENSMUSG00000087203.7 ENSMUST00000148587.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_118231270_-/TTTTTTGTTTTTTTTTGTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTT chr2:118231269-118231270 TTTTTTGTTTTTTTTTGTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTT ENSMUSG00000027344.14 ENSMUST00000028821.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_118231270_-/TTTTTTGTTTTTTTTTGTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTT chr2:118231269-118231270 TTTTTTGTTTTTTTTTGTTTTGTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTT ENSMUSG00000027344.14 ENSMUST00000231133.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119016330_TT/- chr2:119016330-119016331 - ENSMUSG00000039983.13 ENSMUST00000036470.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1448;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119454905_A/T chr2:119454905 T ENSMUSG00000034154.15 ENSMUST00000049920.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119454905_A/T chr2:119454905 T ENSMUSG00000034154.15 ENSMUST00000110808.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119954467_TATTAT/- chr2:119954467-119954472 - ENSMUSG00000033943.15 ENSMUST00000046717.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119954467_TATTAT/- chr2:119954467-119954472 - ENSMUSG00000033943.15 ENSMUST00000079934.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119954467_TATTAT/- chr2:119954467-119954472 - ENSMUSG00000033943.15 ENSMUST00000110773.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119954467_TATTAT/- chr2:119954467-119954472 - ENSMUSG00000033943.15 ENSMUST00000110774.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119954467_TATTAT/- chr2:119954467-119954472 - ENSMUSG00000033943.15 ENSMUST00000122889.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3842;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_119954467_TATTAT/- chr2:119954467-119954472 - ENSMUSG00000033943.15 ENSMUST00000156510.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 - ENSMUSG00000050211.14 ENSMUST00000090071.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 TG ENSMUSG00000050211.14 ENSMUST00000090071.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 - ENSMUSG00000050211.14 ENSMUST00000127009.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 TG ENSMUSG00000050211.14 ENSMUST00000127009.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 - ENSMUSG00000050211.14 ENSMUST00000152263.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 TG ENSMUSG00000050211.14 ENSMUST00000152263.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 - ENSMUSG00000087555.1 ENSMUST00000155641.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3721;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120241197_TGTG/-/TG chr2:120241197-120241200 TG ENSMUSG00000087555.1 ENSMUST00000155641.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3721;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120693925_TT/-/TTT chr2:120693925-120693926 - ENSMUSG00000033705.17 ENSMUST00000140843.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120693925_TT/-/TTT chr2:120693925-120693926 TTT ENSMUSG00000033705.17 ENSMUST00000140843.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120693925_TT/-/TTT chr2:120693925-120693926 - ENSMUSG00000033705.17 ENSMUST00000180041.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_120693925_TT/-/TTT chr2:120693925-120693926 TTT ENSMUSG00000033705.17 ENSMUST00000180041.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000110592.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000110593.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000084244.1 ENSMUST00000118165.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2177;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000121219.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000128428.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000138157.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000142016.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000145075.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121721368_A/G chr2:121721368 G ENSMUSG00000027238.17 ENSMUST00000155570.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121834875_CTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCC/- chr2:121834875-121834919 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_121847703_AGAG/-/AG chr2:121847703-121847706 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_121847703_AGAG/-/AG chr2:121847703-121847706 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_121885250_-/CCTT chr2:121885249-121885250 CCTT ENSMUSG00000060227.15 ENSMUST00000078752.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121885250_-/CCTT chr2:121885249-121885250 CCTT ENSMUSG00000060227.15 ENSMUST00000089912.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121885250_-/CCTT chr2:121885249-121885250 CCTT ENSMUSG00000060227.15 ENSMUST00000089915.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121885250_-/CCTT chr2:121885249-121885250 CCTT ENSMUSG00000060227.15 ENSMUST00000110586.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121885250_-/CCTT chr2:121885249-121885250 CCTT ENSMUSG00000060227.15 ENSMUST00000126256.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121885250_-/CCTT chr2:121885249-121885250 CCTT ENSMUSG00000060227.15 ENSMUST00000127475.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_121885250_-/CCTT chr2:121885249-121885250 CCTT ENSMUSG00000060227.15 ENSMUST00000135416.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_123071692_AGAG/- chr2:123071692-123071695 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_123537484_AGAA/- chr2:123537484-123537487 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_124292414_TT/- chr2:124292414-124292415 - ENSMUSG00000027200.17 ENSMUST00000103241.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_124292414_TT/- chr2:124292414-124292415 - ENSMUSG00000027200.17 ENSMUST00000151199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_124489717_TT/- chr2:124489717-124489718 - ENSMUSG00000027200.17 ENSMUST00000103241.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_124489717_TT/- chr2:124489717-124489718 - ENSMUSG00000027200.17 ENSMUST00000151199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_124738680_-/TTG chr2:124738679-124738680 TTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_125617901_G/T chr2:125617901 T ENSMUSG00000068394.4 ENSMUST00000089776.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125725652_ACAC/-/AC chr2:125725652-125725655 - ENSMUSG00000035109.14 ENSMUST00000042246.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2265;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125725652_ACAC/-/AC chr2:125725652-125725655 AC ENSMUSG00000035109.14 ENSMUST00000042246.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2265;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125725652_ACAC/-/AC chr2:125725652-125725655 - ENSMUSG00000035109.14 ENSMUST00000157002.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1504;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125725652_ACAC/-/AC chr2:125725652-125725655 AC ENSMUSG00000035109.14 ENSMUST00000157002.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1504;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000028636.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000028636.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000094604.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000094604.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000110454.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000110454.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000125084.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000125084.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000131643.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000131643.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000134337.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000134337.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000134798.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000134798.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 - ENSMUSG00000027207.15 ENSMUST00000140873.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_125890725_GAGA/-/GA chr2:125890725-125890728 GA ENSMUSG00000027207.15 ENSMUST00000140873.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126264327_C/T chr2:126264327 T ENSMUSG00000089480.1 ENSMUST00000158855.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4745;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126386388_-/TTTA chr2:126386387-126386388 TTTA ENSMUSG00000060131.11 ENSMUST00000040128.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126386388_-/TTTA chr2:126386387-126386388 TTTA ENSMUSG00000060131.11 ENSMUST00000040149.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126386388_-/TTTA chr2:126386387-126386388 TTTA ENSMUSG00000060131.11 ENSMUST00000134977.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126386388_-/TTTA chr2:126386387-126386388 TTTA ENSMUSG00000060131.11 ENSMUST00000147517.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126551931_TGTG/- chr2:126551931-126551934 - ENSMUSG00000027359.16 ENSMUST00000061491.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=473;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126551931_TGTG/- chr2:126551931-126551934 - ENSMUSG00000027359.16 ENSMUST00000126249.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1656;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126551931_TGTG/- chr2:126551931-126551934 - ENSMUSG00000027359.16 ENSMUST00000141482.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4194;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126551931_TGTG/- chr2:126551931-126551934 - ENSMUSG00000097458.1 ENSMUST00000180898.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_126886554_A/T chr2:126886554 T ENSMUSG00000027366.12 ENSMUST00000028844.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3837;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127096112_-/GATA chr2:127096111-127096112 GATA ENSMUSG00000001999.15 ENSMUST00000002064.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127096112_-/GATA chr2:127096111-127096112 GATA ENSMUSG00000001999.15 ENSMUST00000142737.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3965;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 - ENSMUSG00000034800.15 ENSMUST00000077422.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 GTGT ENSMUSG00000034800.15 ENSMUST00000077422.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 - ENSMUSG00000034800.15 ENSMUST00000110366.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 GTGT ENSMUSG00000034800.15 ENSMUST00000110366.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 - ENSMUSG00000034800.15 ENSMUST00000110368.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 GTGT ENSMUSG00000034800.15 ENSMUST00000110368.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 - ENSMUSG00000034800.15 ENSMUST00000164551.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127579977_GTGTGT/-/GTGT chr2:127579977-127579982 GTGT ENSMUSG00000034800.15 ENSMUST00000164551.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127789702_T/G chr2:127789702 G ENSMUSG00000027378.16 ENSMUST00000028857.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=848;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127789702_T/G chr2:127789702 G ENSMUSG00000027378.16 ENSMUST00000110357.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=805;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_127789702_T/G chr2:127789702 G ENSMUSG00000051319.6 ENSMUST00000135091.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1686;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128003400_GTGT/- chr2:128003400-128003403 - ENSMUSG00000027380.10 ENSMUST00000028859.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128003400_GTGT/- chr2:128003400-128003403 - ENSMUSG00000027380.10 ENSMUST00000110344.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128086509_TT/-/T chr2:128086509-128086510 - ENSMUSG00000027380.10 ENSMUST00000028859.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128086509_TT/-/T chr2:128086509-128086510 T ENSMUSG00000027380.10 ENSMUST00000028859.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128086509_TT/-/T chr2:128086509-128086510 - ENSMUSG00000027380.10 ENSMUST00000110344.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128086509_TT/-/T chr2:128086509-128086510 T ENSMUSG00000027380.10 ENSMUST00000110344.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128086509_TT/-/T chr2:128086509-128086510 - ENSMUSG00000088175.1 ENSMUST00000157550.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128086509_TT/-/T chr2:128086509-128086510 T ENSMUSG00000088175.1 ENSMUST00000157550.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 T ENSMUSG00000014355.10 ENSMUST00000014499.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 AA ENSMUSG00000014355.10 ENSMUST00000014499.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 TAA ENSMUSG00000014355.10 ENSMUST00000014499.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 T ENSMUSG00000014355.10 ENSMUST00000110333.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 AA ENSMUSG00000014355.10 ENSMUST00000110333.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 TAA ENSMUSG00000014355.10 ENSMUST00000110333.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 T ENSMUSG00000014355.10 ENSMUST00000123503.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 AA ENSMUSG00000014355.10 ENSMUST00000123503.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 TAA ENSMUSG00000014355.10 ENSMUST00000123503.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 T ENSMUSG00000014355.10 ENSMUST00000143007.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1563;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 AA ENSMUSG00000014355.10 ENSMUST00000143007.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1563;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_128665583_TA/T/AA/TAA chr2:128665583-128665584 TAA ENSMUSG00000014355.10 ENSMUST00000143007.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1563;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_129984168_-/CACACACACA chr2:129984167-129984168 CACACACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000028890.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1220;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027406.12 ENSMUST00000028892.10 Transcript synonymous_variant 1096 966 322 T acA/acT - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000065272.1 ENSMUST00000083338.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2411;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000065287.1 ENSMUST00000083353.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4129;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000065289.1 ENSMUST00000083355.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2732;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000103198.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1185;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000080610.1 ENSMUST00000116960.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4925;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027406.12 ENSMUST00000124868.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3165;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000133351.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2035;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000136621.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2961;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000138163.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4802;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000141872.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4400;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000143547.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2539;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000145335.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1218;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000146454.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1245;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027406.12 ENSMUST00000149843.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1647;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000149955.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1535;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000150401.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1219;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000150745.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1186;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000153353.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1191;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000159373.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2268;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000160183.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4232;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000160976.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2928;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000161025.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3216;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000161543.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1515;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027405.16 ENSMUST00000162063.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2543;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000093645.1 ENSMUST00000175746.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3218;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130280498_T/A chr2:130280498 A ENSMUSG00000027406.12 ENSMUST00000184538.1 Transcript synonymous_variant,NMD_transcript_variant 54 54 18 T acA/acT - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130344335_A/G chr2:130344335 G ENSMUSG00000053552.14 ENSMUST00000110286.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130344335_A/G chr2:130344335 G ENSMUSG00000053552.14 ENSMUST00000110287.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130344335_A/G chr2:130344335 G ENSMUSG00000053552.14 ENSMUST00000110288.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130344335_A/G chr2:130344335 G ENSMUSG00000053552.14 ENSMUST00000126740.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130344335_A/G chr2:130344335 G ENSMUSG00000053552.14 ENSMUST00000134728.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130344335_A/G chr2:130344335 G ENSMUSG00000053552.14 ENSMUST00000140169.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 - ENSMUSG00000027303.18 ENSMUST00000028769.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 CACA ENSMUSG00000027303.18 ENSMUST00000028769.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 CACACACA ENSMUSG00000027303.18 ENSMUST00000028769.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 - ENSMUSG00000027303.18 ENSMUST00000077303.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 CACA ENSMUSG00000027303.18 ENSMUST00000077303.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 CACACACA ENSMUSG00000027303.18 ENSMUST00000077303.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 - ENSMUSG00000027303.18 ENSMUST00000230981.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 CACA ENSMUSG00000027303.18 ENSMUST00000230981.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130491372_CACACA/-/CACA/CACACACA chr2:130491372-130491377 CACACACA ENSMUSG00000027303.18 ENSMUST00000230981.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130709388_-/AA chr2:130709387-130709388 AA ENSMUSG00000027309.18 ENSMUST00000044766.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130709388_-/AA chr2:130709387-130709388 AA ENSMUSG00000027309.18 ENSMUST00000119422.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130709388_-/AA chr2:130709387-130709388 AA ENSMUSG00000084694.1 ENSMUST00000122745.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3691;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130709388_-/AA chr2:130709387-130709388 AA ENSMUSG00000027309.18 ENSMUST00000138758.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2916;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_130709388_-/AA chr2:130709387-130709388 AA ENSMUSG00000027309.18 ENSMUST00000139684.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1448;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_131898953_TT/-/T chr2:131898953-131898954 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_131898953_TT/-/T chr2:131898953-131898954 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_131944904_TGTGTG/- chr2:131944904-131944909 - ENSMUSG00000098754.7 ENSMUST00000124100.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_131944904_TGTGTG/- chr2:131944904-131944909 - ENSMUSG00000098754.7 ENSMUST00000136783.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_132173990_TCTATCTATCTATCTA/-/TCTATCTATCTA chr2:132173990-132174005 - ENSMUSG00000086756.1 ENSMUST00000131603.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_132173990_TCTATCTATCTATCTA/-/TCTATCTATCTA chr2:132173990-132174005 TCTATCTATCTA ENSMUSG00000086756.1 ENSMUST00000131603.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_132258589_GAGA/- chr2:132258589-132258592 - ENSMUSG00000058793.14 ENSMUST00000103181.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4556;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_132258589_GAGA/- chr2:132258589-132258592 - ENSMUSG00000058793.14 ENSMUST00000110158.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4556;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_132258589_GAGA/- chr2:132258589-132258592 - ENSMUSG00000087377.1 ENSMUST00000124336.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_132258589_GAGA/- chr2:132258589-132258592 - ENSMUSG00000058793.14 ENSMUST00000147456.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4649;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_133064803_TT/-/TTTTT chr2:133064803-133064804 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_133064803_TT/-/TTTTT chr2:133064803-133064804 TTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_133746934_GTGT/- chr2:133746934-133746937 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_134368623_GTGT/- chr2:134368623-134368626 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_134655201_TTT/- chr2:134655201-134655203 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_134708551_TT/- chr2:134708551-134708552 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_134893100_-/CTTT chr2:134893099-134893100 CTTT ENSMUSG00000051177.16 ENSMUST00000070724.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_134893100_-/CTTT chr2:134893099-134893100 CTTT ENSMUSG00000051177.16 ENSMUST00000110116.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_134893100_-/CTTT chr2:134893099-134893100 CTTT ENSMUSG00000051177.16 ENSMUST00000130524.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_134893100_-/CTTT chr2:134893099-134893100 CTTT ENSMUSG00000051177.16 ENSMUST00000131552.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_134893100_-/CTTT chr2:134893099-134893100 CTTT ENSMUSG00000051177.16 ENSMUST00000202531.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135512473_G/A chr2:135512473 A ENSMUSG00000085631.1 ENSMUST00000153402.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135824092_-/TGTGTGTGTGTGTGTG chr2:135824091-135824092 TGTGTGTGTGTGTGTG ENSMUSG00000039943.16 ENSMUST00000035646.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135824092_-/TGTGTGTGTGTGTGTG chr2:135824091-135824092 TGTGTGTGTGTGTGTG ENSMUSG00000039943.16 ENSMUST00000110109.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135824092_-/TGTGTGTGTGTGTGTG chr2:135824091-135824092 TGTGTGTGTGTGTGTG ENSMUSG00000039943.16 ENSMUST00000127729.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135824092_-/TGTGTGTGTGTGTGTG chr2:135824091-135824092 TGTGTGTGTGTGTGTG ENSMUSG00000039943.16 ENSMUST00000134310.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135824092_-/TGTGTGTGTGTGTGTG chr2:135824091-135824092 TGTGTGTGTGTGTGTG ENSMUSG00000039943.16 ENSMUST00000137969.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135824092_-/TGTGTGTGTGTGTGTG chr2:135824091-135824092 TGTGTGTGTGTGTGTG ENSMUSG00000039943.16 ENSMUST00000146018.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_135824092_-/TGTGTGTGTGTGTGTG chr2:135824091-135824092 TGTGTGTGTGTGTGTG ENSMUSG00000039943.16 ENSMUST00000184371.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_137900857_TGTGTG/-/TGTG chr2:137900857-137900862 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_137900857_TGTGTG/-/TGTG chr2:137900857-137900862 TGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_137966123_G/A chr2:137966123 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_138997736_TGTG/- chr2:138997736-138997739 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_141066439_TGTG/- chr2:141066439-141066442 - ENSMUSG00000068205.14 ENSMUST00000078027.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_141066439_TGTG/- chr2:141066439-141066442 - ENSMUSG00000068205.14 ENSMUST00000110064.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_141066439_TGTG/- chr2:141066439-141066442 - ENSMUSG00000068205.14 ENSMUST00000110067.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_141066439_TGTG/- chr2:141066439-141066442 - ENSMUSG00000068205.14 ENSMUST00000139039.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_141942540_A/- chr2:141942540 - ENSMUSG00000068205.14 ENSMUST00000078027.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_141942540_A/- chr2:141942540 - ENSMUSG00000068205.14 ENSMUST00000110064.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_141942540_A/- chr2:141942540 - ENSMUSG00000068205.14 ENSMUST00000110067.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_141942540_A/- chr2:141942540 - ENSMUSG00000068205.14 ENSMUST00000138786.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_143294598_CT/GC chr2:143294598-143294599 GC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_143657879_GTGT/- chr2:143657879-143657882 - ENSMUSG00000027419.9 ENSMUST00000028905.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_143697759_ATATATATACATATACACATATATGTATGTGTATATGTATATAT/- chr2:143697759-143697802 - ENSMUSG00000027419.9 ENSMUST00000028905.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_143989145_T/C chr2:143989145 C ENSMUSG00000027422.15 ENSMUST00000016072.11 Transcript synonymous_variant 1387 1101 367 Q caA/caG - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_143989145_T/C chr2:143989145 C ENSMUSG00000027422.15 ENSMUST00000037875.5 Transcript synonymous_variant 1387 1101 367 Q caA/caG - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144234739_AAA/-/AAAA chr2:144234739-144234741 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_144234739_AAA/-/AAAA chr2:144234739-144234741 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_144507700_TCCCTCCC/- chr2:144507700-144507707 - ENSMUSG00000037259.15 ENSMUST00000081982.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144507700_TCCCTCCC/- chr2:144507700-144507707 - ENSMUSG00000037259.15 ENSMUST00000124823.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1116;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144507700_TCCCTCCC/- chr2:144507700-144507707 - ENSMUSG00000037259.15 ENSMUST00000163701.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144741151_TCTC/- chr2:144741151-144741154 - ENSMUSG00000027430.12 ENSMUST00000028917.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144741151_TCTC/- chr2:144741151-144741154 - ENSMUSG00000027430.12 ENSMUST00000125683.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144741151_TCTC/- chr2:144741151-144741154 - ENSMUSG00000027430.12 ENSMUST00000137406.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144741151_TCTC/- chr2:144741151-144741154 - ENSMUSG00000027430.12 ENSMUST00000145602.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144741151_TCTC/- chr2:144741151-144741154 - ENSMUSG00000027430.12 ENSMUST00000145814.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144822533_TAC/T/CAC chr2:144822533-144822535 T ENSMUSG00000027431.5 ENSMUST00000028918.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1121;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_144822533_TAC/T/CAC chr2:144822533-144822535 CAC ENSMUSG00000027431.5 ENSMUST00000028918.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1121;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_145923225_CACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACGG/- chr2:145923225-145923301 - ENSMUSG00000001767.5 ENSMUST00000001818.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_145923303_ACCATTTCTGTTGCTCCCGGGCTCTGAGTTTTCTAATATGTCTCAGTCTACACACACACATACACACATACACACACACACACACACACACACACACACACACAC/- chr2:145923303-145923407 - ENSMUSG00000001767.5 ENSMUST00000001818.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_146280929_TTT/- chr2:146280929-146280931 - ENSMUSG00000037110.20 ENSMUST00000109986.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_146280929_TTT/- chr2:146280929-146280931 - ENSMUSG00000037110.20 ENSMUST00000131824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_146280929_TTT/- chr2:146280929-146280931 - ENSMUSG00000037110.20 ENSMUST00000146307.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_146280929_TTT/- chr2:146280929-146280931 - ENSMUSG00000037110.20 ENSMUST00000149499.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_146280929_TTT/- chr2:146280929-146280931 - ENSMUSG00000037110.20 ENSMUST00000228797.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_147011383_-/A chr2:147011382-147011383 A ENSMUSG00000027433.5 ENSMUST00000028921.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1613;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_147014050_-/G chr2:147014049-147014050 G ENSMUSG00000027433.5 ENSMUST00000028921.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_147077039_GGT/AAA chr2:147077039-147077041 AAA ENSMUSG00000027433.5 ENSMUST00000028921.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_147323999_TT/- chr2:147323999-147324000 - ENSMUSG00000084774.1 ENSMUST00000127688.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_147323999_TT/- chr2:147323999-147324000 - ENSMUSG00000086509.2 ENSMUST00000136998.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_147710542_TTTT/- chr2:147710542-147710545 - ENSMUSG00000051986.6 ENSMUST00000152542.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=148;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_147798568_A/G chr2:147798568 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_148489927_AA/- chr2:148489927-148489928 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_148650241_AAAA/-/AAA chr2:148650241-148650244 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_148650241_AAAA/-/AAA chr2:148650241-148650244 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_150308217_-/AAGG chr2:150308216-150308217 AAGG ENSMUSG00000063364.10 ENSMUST00000051153.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2718;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_150308217_-/AAGG chr2:150308216-150308217 AAGG ENSMUSG00000084320.2 ENSMUST00000113442.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2009;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_150308217_-/AAGG chr2:150308216-150308217 AAGG ENSMUSG00000084320.2 ENSMUST00000120921.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1700;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_150308217_-/AAGG chr2:150308216-150308217 AAGG ENSMUSG00000063364.10 ENSMUST00000124945.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2720;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_150737671_T/G chr2:150737671 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_150798974_TGTG/- chr2:150798974-150798977 - ENSMUSG00000033059.7 ENSMUST00000045441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_150798974_TGTG/- chr2:150798974-150798977 - ENSMUSG00000033059.7 ENSMUST00000139938.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_151159874_A/G chr2:151159874 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_151752520_AA/- chr2:151752520-151752521 - ENSMUSG00000086800.1 ENSMUST00000134422.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2542;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_151982609_-/GA chr2:151982608-151982609 GA ENSMUSG00000027459.16 ENSMUST00000062047.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2389;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152742174_-/CCC chr2:152742173-152742174 CCC ENSMUSG00000042745.9 ENSMUST00000038368.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4763;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152742174_-/CCC chr2:152742173-152742174 CCC ENSMUSG00000042745.9 ENSMUST00000109824.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4763;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152742174_-/CCC chr2:152742173-152742174 CCC ENSMUSG00000082318.3 ENSMUST00000121985.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3533;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152742179_A/C chr2:152742179 C ENSMUSG00000042745.9 ENSMUST00000038368.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4769;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152742179_A/C chr2:152742179 C ENSMUSG00000042745.9 ENSMUST00000109824.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4769;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152742179_A/C chr2:152742179 C ENSMUSG00000082318.3 ENSMUST00000121985.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3528;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152814974_AA/-/AAA chr2:152814974-152814975 - ENSMUSG00000007659.18 ENSMUST00000007803.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152814974_AA/-/AAA chr2:152814974-152814975 AAA ENSMUSG00000007659.18 ENSMUST00000007803.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152814974_AA/-/AAA chr2:152814974-152814975 - ENSMUSG00000007659.18 ENSMUST00000109820.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152814974_AA/-/AAA chr2:152814974-152814975 AAA ENSMUSG00000007659.18 ENSMUST00000109820.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152814974_AA/-/AAA chr2:152814974-152814975 - ENSMUSG00000007659.18 ENSMUST00000173755.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_152814974_AA/-/AAA chr2:152814974-152814975 AAA ENSMUSG00000007659.18 ENSMUST00000173755.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 - ENSMUSG00000003283.14 ENSMUST00000003370.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 T ENSMUSG00000003283.14 ENSMUST00000003370.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 - ENSMUSG00000003283.14 ENSMUST00000109799.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 T ENSMUSG00000003283.14 ENSMUST00000109799.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 - ENSMUSG00000003283.14 ENSMUST00000189688.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 T ENSMUSG00000003283.14 ENSMUST00000189688.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 - ENSMUSG00000003283.14 ENSMUST00000191431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153149365_TT/-/T chr2:153149365-153149366 T ENSMUSG00000003283.14 ENSMUST00000191431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_153302775_AAAAA/- chr2:153302775-153302779 - ENSMUSG00000027475.9 ENSMUST00000028977.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027487.11 ENSMUST00000028990.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=785;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027488.12 ENSMUST00000028991.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2804;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027488.12 ENSMUST00000109728.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2804;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027487.11 ENSMUST00000109730.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027487.11 ENSMUST00000109731.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=494;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027487.11 ENSMUST00000137918.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=813;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027487.11 ENSMUST00000148289.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=743;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154373504_TCTCTC/- chr2:154373504-154373509 - ENSMUSG00000027487.11 ENSMUST00000150308.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2723;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027490.17 ENSMUST00000000894.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2652;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027489.15 ENSMUST00000000895.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027490.17 ENSMUST00000103145.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2425;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000078129.2 ENSMUST00000104928.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3703;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027489.15 ENSMUST00000109716.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027489.15 ENSMUST00000124382.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027489.15 ENSMUST00000125793.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027489.15 ENSMUST00000135530.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000027489.15 ENSMUST00000149725.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154556979_ACAC/- chr2:154556979-154556982 - ENSMUSG00000078129.2 ENSMUST00000226583.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3703;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154959108_GTGT/- chr2:154959108-154959111 - ENSMUSG00000027596.10 ENSMUST00000109697.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154959108_GTGT/- chr2:154959108-154959111 - ENSMUSG00000027596.10 ENSMUST00000132342.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154959108_GTGT/- chr2:154959108-154959111 - ENSMUSG00000027596.10 ENSMUST00000137333.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154965976_TGTG/- chr2:154965976-154965979 - ENSMUSG00000027596.10 ENSMUST00000109697.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154965976_TGTG/- chr2:154965976-154965979 - ENSMUSG00000027596.10 ENSMUST00000132342.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_154965976_TGTG/- chr2:154965976-154965979 - ENSMUSG00000027596.10 ENSMUST00000137333.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155015556_T/C chr2:155015556 C ENSMUSG00000027596.10 ENSMUST00000029123.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155015556_T/C chr2:155015556 C ENSMUSG00000027596.10 ENSMUST00000109697.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155015556_T/C chr2:155015556 C ENSMUSG00000084897.1 ENSMUST00000130870.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2710;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155015556_T/C chr2:155015556 C ENSMUSG00000027596.10 ENSMUST00000132342.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155015556_T/C chr2:155015556 C ENSMUSG00000027596.10 ENSMUST00000137333.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155015556_T/C chr2:155015556 C ENSMUSG00000027596.10 ENSMUST00000148402.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 - ENSMUSG00000038369.14 ENSMUST00000109670.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3063;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 T ENSMUSG00000038369.14 ENSMUST00000109670.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3063;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 TTT ENSMUSG00000038369.14 ENSMUST00000109670.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3063;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 - ENSMUSG00000038369.14 ENSMUST00000123293.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2975;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 T ENSMUSG00000038369.14 ENSMUST00000123293.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2975;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 TTT ENSMUSG00000038369.14 ENSMUST00000123293.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2975;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 - ENSMUSG00000038369.14 ENSMUST00000134508.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3045;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 T ENSMUSG00000038369.14 ENSMUST00000134508.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3045;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155476869_TT/-/T/TTT chr2:155476869-155476870 TTT ENSMUSG00000038369.14 ENSMUST00000134508.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3045;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027605.18 ENSMUST00000065973.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027605.18 ENSMUST00000065973.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027610.17 ENSMUST00000079691.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027610.17 ENSMUST00000079691.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027610.17 ENSMUST00000126322.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027610.17 ENSMUST00000126322.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027610.17 ENSMUST00000130881.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027610.17 ENSMUST00000130881.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027610.17 ENSMUST00000137305.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027610.17 ENSMUST00000137305.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027605.18 ENSMUST00000148870.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3427;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027605.18 ENSMUST00000148870.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3427;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027605.18 ENSMUST00000153975.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027605.18 ENSMUST00000153975.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027610.17 ENSMUST00000155347.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027610.17 ENSMUST00000155347.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027610.17 ENSMUST00000157008.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027610.17 ENSMUST00000157008.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 - ENSMUSG00000027610.17 ENSMUST00000176415.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_155580407_AA/-/AAA chr2:155580407-155580408 AAA ENSMUSG00000027610.17 ENSMUST00000176415.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_156951959_AA/- chr2:156951959-156951960 - ENSMUSG00000027634.14 ENSMUST00000069600.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_156951959_AA/- chr2:156951959-156951960 - ENSMUSG00000027634.14 ENSMUST00000072298.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_156951959_AA/- chr2:156951959-156951960 - ENSMUSG00000027634.14 ENSMUST00000109558.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_156951959_AA/- chr2:156951959-156951960 - ENSMUSG00000027634.14 ENSMUST00000126627.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4383;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_156951959_AA/- chr2:156951959-156951960 - ENSMUSG00000027634.14 ENSMUST00000131955.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_156951959_AA/- chr2:156951959-156951960 - ENSMUSG00000027634.14 ENSMUST00000140297.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_156951959_AA/- chr2:156951959-156951960 - ENSMUSG00000027634.14 ENSMUST00000156651.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_157603563_TT/-/T chr2:157603563-157603564 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_157603563_TT/-/T chr2:157603563-157603564 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_157811018_CACACACA/- chr2:157811018-157811025 - ENSMUSG00000027649.15 ENSMUST00000029178.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_157811018_CACACACA/- chr2:157811018-157811025 - ENSMUSG00000027649.15 ENSMUST00000129842.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_157811018_CACACACA/- chr2:157811018-157811025 - ENSMUSG00000027649.15 ENSMUST00000155479.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4286;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_157811018_CACACACA/- chr2:157811018-157811025 - ENSMUSG00000027649.15 ENSMUST00000156300.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158247767_AAGAAG/- chr2:158247767-158247772 - ENSMUSG00000098765.1 ENSMUST00000183555.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4202;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158521620_AA/-/A chr2:158521620-158521621 - ENSMUSG00000074625.10 ENSMUST00000099133.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158521620_AA/-/A chr2:158521620-158521621 A ENSMUSG00000074625.10 ENSMUST00000099133.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158521620_AA/-/A chr2:158521620-158521621 - ENSMUSG00000074625.10 ENSMUST00000165398.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158521620_AA/-/A chr2:158521620-158521621 A ENSMUSG00000074625.10 ENSMUST00000165398.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158547236_GTGT/- chr2:158547236-158547239 - ENSMUSG00000074625.10 ENSMUST00000099133.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158547236_GTGT/- chr2:158547236-158547239 - ENSMUSG00000074625.10 ENSMUST00000135838.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158547236_GTGT/- chr2:158547236-158547239 - ENSMUSG00000074625.10 ENSMUST00000165398.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_158576107_A/T chr2:158576107 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_158891850_G/A chr2:158891850 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_159322321_A/T chr2:159322321 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_159346238_C/T chr2:159346238 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_159777454_AA/-/AAA chr2:159777454-159777455 - ENSMUSG00000083451.1 ENSMUST00000119101.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=221;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_159777454_AA/-/AAA chr2:159777454-159777455 AAA ENSMUSG00000083451.1 ENSMUST00000119101.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=221;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_159897062_AT/- chr2:159897062-159897063 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_160383706_C/T chr2:160383706 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_161166463_AA/-/A chr2:161166463-161166464 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_161166463_AA/-/A chr2:161166463-161166464 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_161257795_TT/- chr2:161257795-161257796 - ENSMUSG00000081099.2 ENSMUST00000121506.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2338;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161365746_AA/- chr2:161365746-161365747 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_161665056_C/A chr2:161665056 A ENSMUSG00000053141.16 ENSMUST00000109441.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161665056_C/A chr2:161665056 A ENSMUSG00000053141.16 ENSMUST00000109442.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161665056_C/A chr2:161665056 A ENSMUSG00000053141.16 ENSMUST00000109443.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161665056_C/A chr2:161665056 A ENSMUSG00000053141.16 ENSMUST00000109445.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 - ENSMUSG00000053141.16 ENSMUST00000109441.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 TC ENSMUSG00000053141.16 ENSMUST00000109441.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 - ENSMUSG00000053141.16 ENSMUST00000109442.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 TC ENSMUSG00000053141.16 ENSMUST00000109442.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 - ENSMUSG00000053141.16 ENSMUST00000109443.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 TC ENSMUSG00000053141.16 ENSMUST00000109443.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 - ENSMUSG00000053141.16 ENSMUST00000109445.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 TC ENSMUSG00000053141.16 ENSMUST00000109445.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 - ENSMUSG00000053141.16 ENSMUST00000153770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_161725205_TCTC/-/TC chr2:161725205-161725208 TC ENSMUSG00000053141.16 ENSMUST00000153770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162146237_GG/AA chr2:162146237-162146238 AA ENSMUSG00000053141.16 ENSMUST00000109441.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162146237_GG/AA chr2:162146237-162146238 AA ENSMUSG00000053141.16 ENSMUST00000109442.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162146237_GG/AA chr2:162146237-162146238 AA ENSMUSG00000053141.16 ENSMUST00000109443.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162146237_GG/AA chr2:162146237-162146238 AA ENSMUSG00000053141.16 ENSMUST00000109445.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162292834_-/CTTT chr2:162292833-162292834 CTTT ENSMUSG00000053141.16 ENSMUST00000109441.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162292834_-/CTTT chr2:162292833-162292834 CTTT ENSMUSG00000053141.16 ENSMUST00000109442.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162292834_-/CTTT chr2:162292833-162292834 CTTT ENSMUSG00000053141.16 ENSMUST00000109443.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162292834_-/CTTT chr2:162292833-162292834 CTTT ENSMUSG00000053141.16 ENSMUST00000109445.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162730671_GTGT/- chr2:162730671-162730674 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_162811572_TCA/T/ACA chr2:162811572-162811574 T ENSMUSG00000088064.1 ENSMUST00000157439.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4737;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162811572_TCA/T/ACA chr2:162811572-162811574 ACA ENSMUSG00000088064.1 ENSMUST00000157439.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4737;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 - ENSMUSG00000035576.13 ENSMUST00000035751.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 GTGTGT ENSMUSG00000035576.13 ENSMUST00000035751.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 - ENSMUSG00000035576.13 ENSMUST00000124264.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3726;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 GTGTGT ENSMUSG00000035576.13 ENSMUST00000124264.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3726;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 - ENSMUSG00000035576.13 ENSMUST00000125296.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3726;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 GTGTGT ENSMUSG00000035576.13 ENSMUST00000125296.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3726;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 - ENSMUSG00000035576.13 ENSMUST00000137108.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 GTGTGT ENSMUSG00000035576.13 ENSMUST00000137108.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 - ENSMUSG00000035576.13 ENSMUST00000149447.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 GTGTGT ENSMUSG00000035576.13 ENSMUST00000149447.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 - ENSMUSG00000035576.13 ENSMUST00000153416.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 GTGTGT ENSMUSG00000035576.13 ENSMUST00000153416.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 - ENSMUSG00000035576.13 ENSMUST00000156954.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_162944276_GTGT/-/GTGTGT chr2:162944276-162944279 GTGTGT ENSMUSG00000035576.13 ENSMUST00000156954.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163344882_-/AAGA chr2:163344881-163344882 AAGA ENSMUSG00000017817.11 ENSMUST00000017961.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163344882_-/AAGA chr2:163344881-163344882 AAGA ENSMUSG00000017817.11 ENSMUST00000109425.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163483214_TT/-/T chr2:163483214-163483215 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_163483214_TT/-/T chr2:163483214-163483215 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_163550417_GTGT/- chr2:163550417-163550420 - ENSMUSG00000017950.16 ENSMUST00000018094.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163550417_GTGT/- chr2:163550417-163550420 - ENSMUSG00000017950.16 ENSMUST00000109411.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163550417_GTGT/- chr2:163550417-163550420 - ENSMUSG00000017950.16 ENSMUST00000131658.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163550417_GTGT/- chr2:163550417-163550420 - ENSMUSG00000017950.16 ENSMUST00000137449.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163550417_GTGT/- chr2:163550417-163550420 - ENSMUSG00000017950.16 ENSMUST00000143911.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163635145_AA/- chr2:163635145-163635146 - ENSMUSG00000017707.9 ENSMUST00000017851.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163635145_AA/- chr2:163635145-163635146 - ENSMUSG00000017707.9 ENSMUST00000129854.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1685;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163833913_A/T chr2:163833913 T ENSMUSG00000027656.7 ENSMUST00000029188.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=767;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163833913_A/T chr2:163833913 T ENSMUSG00000027656.7 ENSMUST00000138730.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4895;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163834130_T/A chr2:163834130 A ENSMUSG00000027656.7 ENSMUST00000029188.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=984;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163901424_ACAC/-/AC chr2:163901424-163901427 - ENSMUSG00000035226.5 ENSMUST00000044734.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_163901424_ACAC/-/AC chr2:163901424-163901427 AC ENSMUSG00000035226.5 ENSMUST00000044734.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164007288_A/G chr2:164007288 G ENSMUSG00000018326.9 ENSMUST00000018470.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164007288_A/G chr2:164007288 G ENSMUSG00000018326.9 ENSMUST00000131288.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164007303_G/A chr2:164007303 A ENSMUSG00000018326.9 ENSMUST00000018470.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164007303_G/A chr2:164007303 A ENSMUSG00000018326.9 ENSMUST00000131288.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164061222_-/TATC chr2:164061221-164061222 TATC ENSMUSG00000018322.10 ENSMUST00000018466.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164061222_-/TATC chr2:164061221-164061222 TATC ENSMUSG00000018322.10 ENSMUST00000109384.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164061222_-/TATC chr2:164061221-164061222 TATC ENSMUSG00000018322.10 ENSMUST00000132602.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000017307.16 ENSMUST00000017451.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000050373.13 ENSMUST00000056181.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=431;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000017307.16 ENSMUST00000103094.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000017307.16 ENSMUST00000133053.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000017307.16 ENSMUST00000134611.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000050373.13 ENSMUST00000140519.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1617;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000050373.13 ENSMUST00000172577.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1189;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000050373.13 ENSMUST00000173945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=425;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000050373.13 ENSMUST00000174070.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1754;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164794241_C/A chr2:164794241 A ENSMUSG00000050373.13 ENSMUST00000174342.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=433;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000039873.4 ENSMUST00000042775.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3888;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000039873.4 ENSMUST00000042775.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3888;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017754.13 ENSMUST00000059954.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017754.13 ENSMUST00000059954.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000103092.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000103092.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000103093.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000103093.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017754.13 ENSMUST00000109316.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017754.13 ENSMUST00000109316.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017754.13 ENSMUST00000109317.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017754.13 ENSMUST00000109317.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000127650.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1653;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000127650.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1653;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000128596.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=872;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000128596.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=872;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000130959.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2151;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000130959.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2151;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000133077.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=309;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000133077.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=309;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000133502.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000133502.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000140213.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000140213.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000143293.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1623;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000143293.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1623;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000143780.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=342;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000143780.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=342;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000144580.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1875;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000144580.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1875;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000146525.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2923;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000146525.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2923;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000147883.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3565;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000147883.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3565;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000151493.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3282;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000151493.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3282;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000152721.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=867;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000152721.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=867;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 - ENSMUSG00000017760.16 ENSMUST00000155061.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2470;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_164837344_CC/-/C chr2:164837344-164837345 C ENSMUSG00000017760.16 ENSMUST00000155061.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2470;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_165008915_-/AC chr2:165008914-165008915 AC ENSMUSG00000039804.15 ENSMUST00000040381.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_165008915_-/AC chr2:165008914-165008915 AC ENSMUSG00000039804.15 ENSMUST00000121377.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_165008915_-/AC chr2:165008914-165008915 AC ENSMUSG00000039804.15 ENSMUST00000122070.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_165008915_-/AC chr2:165008914-165008915 AC ENSMUSG00000039804.15 ENSMUST00000123347.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4251;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_165008915_-/AC chr2:165008914-165008915 AC ENSMUSG00000039804.15 ENSMUST00000127545.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1205;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_165008915_-/AC chr2:165008914-165008915 AC ENSMUSG00000039804.15 ENSMUST00000153905.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4082;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166032412_CTAT/- chr2:166032412-166032415 - ENSMUSG00000027678.17 ENSMUST00000088095.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166032412_CTAT/- chr2:166032412-166032415 - ENSMUSG00000027678.17 ENSMUST00000109252.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166043095_-/TATC chr2:166043094-166043095 TATC ENSMUSG00000027678.17 ENSMUST00000088095.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166043095_-/TATC chr2:166043094-166043095 TATC ENSMUSG00000027678.17 ENSMUST00000109252.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166043095_-/TATC chr2:166043094-166043095 TATC ENSMUSG00000027678.17 ENSMUST00000153507.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4823;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166269178_GTGT/- chr2:166269178-166269181 - ENSMUSG00000084840.1 ENSMUST00000152987.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4727;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166735125_-/TTCC chr2:166735124-166735125 TTCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_166835517_-/G chr2:166835516-166835517 G ENSMUSG00000074582.10 ENSMUST00000099078.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_166835517_-/G chr2:166835516-166835517 G ENSMUSG00000074582.10 ENSMUST00000144847.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_167045727_GTGTGGCTCAGGCTAGCCTCTGACTCCTGAGGCTGGGATTATAACTTGTTTGTA/- chr2:167045727-167045780 - ENSMUSG00000039501.14 ENSMUST00000048988.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_167045727_GTGTGGCTCAGGCTAGCCTCTGACTCCTGAGGCTGGGATTATAACTTGTTTGTA/- chr2:167045727-167045780 - ENSMUSG00000039501.14 ENSMUST00000067584.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2232;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_167045727_GTGTGGCTCAGGCTAGCCTCTGACTCCTGAGGCTGGGATTATAACTTGTTTGTA/- chr2:167045727-167045780 - ENSMUSG00000039501.14 ENSMUST00000128676.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_167045727_GTGTGGCTCAGGCTAGCCTCTGACTCCTGAGGCTGGGATTATAACTTGTTTGTA/- chr2:167045727-167045780 - ENSMUSG00000039501.14 ENSMUST00000135967.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3791;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_167045727_GTGTGGCTCAGGCTAGCCTCTGACTCCTGAGGCTGGGATTATAACTTGTTTGTA/- chr2:167045727-167045780 - ENSMUSG00000039501.14 ENSMUST00000155281.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_167791445_-/TCCA chr2:167791444-167791445 TCCA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_167877905_TT/-/T chr2:167877905-167877906 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_167877905_TT/-/T chr2:167877905-167877906 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_167880577_TGTG/-/TG chr2:167880577-167880580 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_167880577_TGTG/-/TG chr2:167880577-167880580 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_168060098_G/C chr2:168060098 C ENSMUSG00000092849.1 ENSMUST00000175108.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4722;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168072029_ACAC/-/AC chr2:168072029-168072032 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_168072029_ACAC/-/AC chr2:168072029-168072032 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_168304482_-/TATC chr2:168304481-168304482 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_168365434_-/AAGG chr2:168365433-168365434 AAGG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_168656815_ACGCCCGGTTT/- chr2:168656815-168656825 - ENSMUSG00000027546.15 ENSMUST00000029060.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168656815_ACGCCCGGTTT/- chr2:168656815-168656825 - ENSMUSG00000027546.15 ENSMUST00000109175.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168656815_ACGCCCGGTTT/- chr2:168656815-168656825 - ENSMUSG00000027546.15 ENSMUST00000109176.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168656815_ACGCCCGGTTT/- chr2:168656815-168656825 - ENSMUSG00000027546.15 ENSMUST00000109177.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168656815_ACGCCCGGTTT/- chr2:168656815-168656825 - ENSMUSG00000027546.15 ENSMUST00000178504.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168870108_T/C chr2:168870108 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_168930038_-/TCTTT chr2:168930037-168930038 TCTTT ENSMUSG00000027551.15 ENSMUST00000087971.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168930038_-/TCTTT chr2:168930037-168930038 TCTTT ENSMUSG00000027551.15 ENSMUST00000109161.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4775;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_168930038_-/TCTTT chr2:168930037-168930038 TCTTT ENSMUSG00000027551.15 ENSMUST00000109162.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169124715_-/CTAT chr2:169124714-169124715 CTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_169217307_ACACAC/- chr2:169217307-169217312 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 - ENSMUSG00000047907.11 ENSMUST00000109157.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=743;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 GTGTGTGT ENSMUSG00000047907.11 ENSMUST00000109157.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=743;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 - ENSMUSG00000047907.11 ENSMUST00000109159.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=80;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 GTGTGTGT ENSMUSG00000047907.11 ENSMUST00000109159.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=80;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 - ENSMUSG00000096972.7 ENSMUST00000180945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=743;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 GTGTGTGT ENSMUSG00000096972.7 ENSMUST00000180945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=743;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 - ENSMUSG00000096972.7 ENSMUST00000181446.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=713;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 GTGTGTGT ENSMUSG00000096972.7 ENSMUST00000181446.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=713;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 - ENSMUSG00000103662.1 ENSMUST00000191912.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4612;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169632930_GTGT/-/GTGTGTGT chr2:169632930-169632933 GTGTGTGT ENSMUSG00000103662.1 ENSMUST00000191912.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4612;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 - ENSMUSG00000047907.11 ENSMUST00000109157.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 TTT ENSMUSG00000047907.11 ENSMUST00000109157.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 - ENSMUSG00000047907.11 ENSMUST00000109159.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 TTT ENSMUSG00000047907.11 ENSMUST00000109159.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 - ENSMUSG00000096972.7 ENSMUST00000180945.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 TTT ENSMUSG00000096972.7 ENSMUST00000180945.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 - ENSMUSG00000096972.7 ENSMUST00000181446.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169637512_TT/-/TTT chr2:169637512-169637513 TTT ENSMUSG00000096972.7 ENSMUST00000181446.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169756772_C/G chr2:169756772 G ENSMUSG00000047907.11 ENSMUST00000109157.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169756772_C/G chr2:169756772 G ENSMUSG00000047907.11 ENSMUST00000109159.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169756772_C/G chr2:169756772 G ENSMUSG00000096972.7 ENSMUST00000180945.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169756772_C/G chr2:169756772 G ENSMUSG00000096972.7 ENSMUST00000181446.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 - ENSMUSG00000047907.11 ENSMUST00000109157.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 T ENSMUSG00000047907.11 ENSMUST00000109157.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 - ENSMUSG00000047907.11 ENSMUST00000109159.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 T ENSMUSG00000047907.11 ENSMUST00000109159.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 - ENSMUSG00000096972.7 ENSMUST00000180945.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 T ENSMUSG00000096972.7 ENSMUST00000180945.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 - ENSMUSG00000096972.7 ENSMUST00000181446.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169781506_TT/-/T chr2:169781506-169781507 T ENSMUSG00000096972.7 ENSMUST00000181446.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169967291_TGTG/- chr2:169967291-169967294 - ENSMUSG00000047907.11 ENSMUST00000123300.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169967291_TGTG/- chr2:169967291-169967294 - ENSMUSG00000047907.11 ENSMUST00000185239.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169967291_TGTG/- chr2:169967291-169967294 - ENSMUSG00000103935.1 ENSMUST00000194482.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4304;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_169967291_TGTG/- chr2:169967291-169967294 - ENSMUSG00000103935.1 ENSMUST00000194651.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4104;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170086203_AAAA/- chr2:170086203-170086206 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_170241361_-/CTTT chr2:170241360-170241361 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_170356769_TT/- chr2:170356769-170356770 - ENSMUSG00000013523.13 ENSMUST00000013667.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170356769_TT/- chr2:170356769-170356770 - ENSMUSG00000013523.13 ENSMUST00000068137.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170356769_TT/- chr2:170356769-170356770 - ENSMUSG00000013523.13 ENSMUST00000109152.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170356769_TT/- chr2:170356769-170356770 - ENSMUSG00000086999.1 ENSMUST00000131931.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170356769_TT/- chr2:170356769-170356770 - ENSMUSG00000013523.13 ENSMUST00000133673.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170356769_TT/- chr2:170356769-170356770 - ENSMUSG00000013523.13 ENSMUST00000154650.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170813435_CTATCTAT/-/CTAT chr2:170813435-170813442 - ENSMUSG00000027560.4 ENSMUST00000029075.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_170813435_CTATCTAT/-/CTAT chr2:170813435-170813442 CTAT ENSMUSG00000027560.4 ENSMUST00000029075.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_171155462_GTGTGT/- chr2:171155462-171155467 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_171298960_AGAA/- chr2:171298960-171298963 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_171330969_C/T chr2:171330969 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_171810779_AA/- chr2:171810779-171810780 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_172193185_-/CTTT chr2:172193184-172193185 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_172615506_A/T chr2:172615506 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_172978411_CACA/- chr2:172978411-172978414 - ENSMUSG00000005883.15 ENSMUST00000050442.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1435;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_172978411_CACA/- chr2:172978411-172978414 - ENSMUSG00000005883.15 ENSMUST00000109125.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1428;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_172978411_CACA/- chr2:172978411-172978414 - ENSMUSG00000005883.15 ENSMUST00000109126.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1435;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_172978411_CACA/- chr2:172978411-172978414 - ENSMUSG00000005883.15 ENSMUST00000144044.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_173054079_-/GT chr2:173054078-173054079 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_173336602_TGTG/- chr2:173336602-173336605 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_173345761_-/CTTT chr2:173345760-173345761 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_173377432_CTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCCTCCCC/- chr2:173377432-173377492 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_173979360_-/A chr2:173979359-173979360 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_174371108_T/A chr2:174371108 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016252.7 ENSMUST00000016396.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3822;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016257.15 ENSMUST00000016401.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016257.15 ENSMUST00000117442.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016257.15 ENSMUST00000120822.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016257.15 ENSMUST00000141100.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1453;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016257.15 ENSMUST00000147944.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1244;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016252.7 ENSMUST00000149191.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3878;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174467928_-/GAAA chr2:174467927-174467928 GAAA ENSMUSG00000016252.7 ENSMUST00000153132.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3838;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_174630449_T/A chr2:174630449 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_174663034_TCTC/- chr2:174663034-174663037 - ENSMUSG00000050600.5 ENSMUST00000059452.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_177050854_C/T chr2:177050854 T ENSMUSG00000083111.1 ENSMUST00000121755.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2662;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_177227262_T/C chr2:177227262 C ENSMUSG00000083817.1 ENSMUST00000117234.1 Transcript non_coding_transcript_exon_variant 346 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_177253381_A/T chr2:177253381 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_177253391_G/A chr2:177253391 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_177590156_ACAC/-/AC chr2:177590156-177590159 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_177590156_ACAC/-/AC chr2:177590156-177590159 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_178329097_A/C chr2:178329097 C ENSMUSG00000027525.17 ENSMUST00000103065.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_178329097_A/C chr2:178329097 C ENSMUSG00000027525.17 ENSMUST00000103066.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_178329097_A/C chr2:178329097 C ENSMUSG00000027525.17 ENSMUST00000108915.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_178329097_A/C chr2:178329097 C ENSMUSG00000027525.17 ENSMUST00000108916.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_178329097_A/C chr2:178329097 C ENSMUSG00000027525.17 ENSMUST00000108917.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_178329097_A/C chr2:178329097 C ENSMUSG00000027525.17 ENSMUST00000133267.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_178329097_A/C chr2:178329097 C ENSMUSG00000027525.17 ENSMUST00000141272.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_178786605_T/- chr2:178786605 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr2_179779893_AA/-/A chr2:179779893-179779894 - ENSMUSG00000000305.12 ENSMUST00000000314.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_179779893_AA/-/A chr2:179779893-179779894 A ENSMUSG00000000305.12 ENSMUST00000000314.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_179779893_AA/-/A chr2:179779893-179779894 - ENSMUSG00000000305.12 ENSMUST00000108911.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_179779893_AA/-/A chr2:179779893-179779894 A ENSMUSG00000000305.12 ENSMUST00000108911.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_179779893_AA/-/A chr2:179779893-179779894 - ENSMUSG00000000305.12 ENSMUST00000124708.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_179779893_AA/-/A chr2:179779893-179779894 A ENSMUSG00000000305.12 ENSMUST00000124708.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_179779893_AA/-/A chr2:179779893-179779894 - ENSMUSG00000000305.12 ENSMUST00000136411.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_179779893_AA/-/A chr2:179779893-179779894 A ENSMUSG00000000305.12 ENSMUST00000136411.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000029092.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000029092.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000108859.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000108859.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000108860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000108860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000108861.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000108861.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000108862.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000108862.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000132627.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000132627.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000134519.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4299;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000134519.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4299;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000136590.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000136590.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000138706.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3954;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000138706.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3954;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000145629.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000145629.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000150507.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3971;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000150507.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3971;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000087293.1 ENSMUST00000154616.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2719;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000087293.1 ENSMUST00000154616.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2719;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000184394.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000184394.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 - ENSMUSG00000027575.19 ENSMUST00000185115.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1508;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_180969531_AA/-/A chr2:180969531-180969532 A ENSMUSG00000027575.19 ENSMUST00000185115.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1508;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181181629_GTGT/-/GT chr2:181181629-181181632 - ENSMUSG00000084696.1 ENSMUST00000122747.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1880;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181181629_GTGT/-/GT chr2:181181629-181181632 GT ENSMUSG00000084696.1 ENSMUST00000122747.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1880;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181268041_TTT/- chr2:181268041-181268043 - ENSMUSG00000038705.13 ENSMUST00000049032.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181268041_TTT/- chr2:181268041-181268043 - ENSMUSG00000038705.13 ENSMUST00000130475.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181268041_TTT/- chr2:181268041-181268043 - ENSMUSG00000038705.13 ENSMUST00000141003.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181268041_TTT/- chr2:181268041-181268043 - ENSMUSG00000038705.13 ENSMUST00000141110.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181268041_TTT/- chr2:181268041-181268043 - ENSMUSG00000038705.13 ENSMUST00000147665.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181295597_AAA/- chr2:181295597-181295599 - ENSMUSG00000084033.3 ENSMUST00000119008.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2662;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000048608.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000054622.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000098971.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000108814.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000108815.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000139608.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000146273.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr2_181329391_-/TTTTTTTTTTTTTT chr2:181329390-181329391 TTTTTTTTTTTTTT ENSMUSG00000038685.18 ENSMUST00000148252.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_3181218_-/AAAAAAAAAA chr3:3181217-3181218 AAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_3229949_G/C chr3:3229949 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_4031889_CC/- chr3:4031889-4031890 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_5995303_ACAC/- chr3:5995303-5995306 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_6123788_ACAC/-/AC chr3:6123788-6123791 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_6123788_ACAC/-/AC chr3:6123788-6123791 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_6593792_G/T chr3:6593792 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_6727535_CTCT/- chr3:6727535-6727538 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_7082988_C/T chr3:7082988 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_7083014_G/C chr3:7083014 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_7432480_T/A chr3:7432480 A ENSMUSG00000027499.12 ENSMUST00000028999.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_7432480_T/A chr3:7432480 A ENSMUSG00000027499.12 ENSMUST00000192468.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_7432480_T/A chr3:7432480 A ENSMUSG00000027499.12 ENSMUST00000193330.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_7432484_C/A chr3:7432484 A ENSMUSG00000027499.12 ENSMUST00000028999.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_7432484_C/A chr3:7432484 A ENSMUSG00000027499.12 ENSMUST00000192468.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_7432484_C/A chr3:7432484 A ENSMUSG00000027499.12 ENSMUST00000193330.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_7791923_A/G chr3:7791923 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_7898297_TTTTT/-/TTT chr3:7898297-7898301 - ENSMUSG00000103399.1 ENSMUST00000194764.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4378;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_7898297_TTTTT/-/TTT chr3:7898297-7898301 TTT ENSMUSG00000103399.1 ENSMUST00000194764.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4378;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_10401143_TGTG/- chr3:10401143-10401146 - ENSMUSG00000027536.6 ENSMUST00000191826.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_10568845_ACAC/- chr3:10568845-10568848 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_11124321_T/C chr3:11124321 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_11134593_G/A chr3:11134593 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_11317404_TATA/- chr3:11317404-11317407 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_11615103_TCTC/- chr3:11615103-11615106 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_11625379_CTCTCT/-/CTCT chr3:11625379-11625384 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_11625379_CTCTCT/-/CTCT chr3:11625379-11625384 CTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_12001851_G/A chr3:12001851 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_12588755_TG/CA chr3:12588755-12588756 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_12794479_A/T chr3:12794479 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_12978570_TT/- chr3:12978570-12978571 - ENSMUSG00000103735.1 ENSMUST00000195564.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2869;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_13677337_AA/-/A chr3:13677337-13677338 - ENSMUSG00000039717.16 ENSMUST00000191806.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_13677337_AA/-/A chr3:13677337-13677338 A ENSMUSG00000039717.16 ENSMUST00000191806.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_13677337_AA/-/A chr3:13677337-13677338 - ENSMUSG00000039717.16 ENSMUST00000193117.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_13677337_AA/-/A chr3:13677337-13677338 A ENSMUSG00000039717.16 ENSMUST00000193117.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_13677337_AA/-/A chr3:13677337-13677338 - ENSMUSG00000039717.16 ENSMUST00000211860.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_13677337_AA/-/A chr3:13677337-13677338 A ENSMUSG00000039717.16 ENSMUST00000211860.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_14401666_AA/- chr3:14401666-14401667 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_15358730_G/C chr3:15358730 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_15486299_-/AAA chr3:15486298-15486299 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_15531359_C/A chr3:15531359 A ENSMUSG00000095028.6 ENSMUST00000091319.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_15531359_C/A chr3:15531359 A ENSMUSG00000095028.6 ENSMUST00000192382.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_15775174_C/A chr3:15775174 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_15859797_C/A chr3:15859797 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_16363618_AGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAAGGGAGGGGAGGGG/- chr3:16363618-16363662 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_18064018_TGTGTG/- chr3:18064018-18064023 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_18444995_T/A chr3:18444995 A ENSMUSG00000102886.1 ENSMUST00000193120.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_18852846_C/T chr3:18852846 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_18878795_TGTG/-/TG chr3:18878795-18878798 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_18878795_TGTG/-/TG chr3:18878795-18878798 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_19572627_CA/C/AA chr3:19572627-19572628 C ENSMUSG00000027606.12 ENSMUST00000029132.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_19572627_CA/C/AA chr3:19572627-19572628 AA ENSMUSG00000027606.12 ENSMUST00000029132.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_19572627_CA/C/AA chr3:19572627-19572628 C ENSMUSG00000027606.12 ENSMUST00000118735.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_19572627_CA/C/AA chr3:19572627-19572628 AA ENSMUSG00000027606.12 ENSMUST00000118735.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_19572627_CA/C/AA chr3:19572627-19572628 C ENSMUSG00000027606.12 ENSMUST00000118968.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_19572627_CA/C/AA chr3:19572627-19572628 AA ENSMUSG00000027606.12 ENSMUST00000118968.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_19572627_CA/C/AA chr3:19572627-19572628 C ENSMUSG00000027606.12 ENSMUST00000165693.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_19572627_CA/C/AA chr3:19572627-19572628 AA ENSMUSG00000027606.12 ENSMUST00000165693.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000027630.13 ENSMUST00000063988.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3579;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000027630.13 ENSMUST00000193734.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2947;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000106019.1 ENSMUST00000199072.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=707;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000027630.13 ENSMUST00000200793.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3127;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000027630.13 ENSMUST00000200943.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3231;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000027630.13 ENSMUST00000202149.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3176;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000027630.13 ENSMUST00000202647.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3051;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22073702_ACAC/- chr3:22073702-22073705 - ENSMUSG00000027630.13 ENSMUST00000202747.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3022;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22521047_A/G chr3:22521047 G ENSMUSG00000103801.1 ENSMUST00000192825.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4191;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_22521058_A/G chr3:22521058 G ENSMUSG00000103801.1 ENSMUST00000192825.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4180;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23274218_AC/GG chr3:23274218-23274219 GG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_23898621_-/AAAAAAAAAA chr3:23898620-23898621 AAAAAAAAAA ENSMUSG00000102758.3 ENSMUST00000192246.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23898621_-/AAAAAAAAAA chr3:23898620-23898621 AAAAAAAAAA ENSMUSG00000102758.3 ENSMUST00000203414.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23898621_-/AAAAAAAAAA chr3:23898620-23898621 AAAAAAAAAA ENSMUSG00000102758.3 ENSMUST00000203997.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23937130_TT/-/T chr3:23937130-23937131 - ENSMUSG00000102758.3 ENSMUST00000192246.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23937130_TT/-/T chr3:23937130-23937131 T ENSMUSG00000102758.3 ENSMUST00000192246.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23937130_TT/-/T chr3:23937130-23937131 - ENSMUSG00000102758.3 ENSMUST00000203414.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23937130_TT/-/T chr3:23937130-23937131 T ENSMUSG00000102758.3 ENSMUST00000203414.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23937130_TT/-/T chr3:23937130-23937131 - ENSMUSG00000102758.3 ENSMUST00000203997.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_23937130_TT/-/T chr3:23937130-23937131 T ENSMUSG00000102758.3 ENSMUST00000203997.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_24159937_A/T chr3:24159937 T ENSMUSG00000102758.3 ENSMUST00000203414.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_24159943_-/T chr3:24159942-24159943 T ENSMUSG00000102758.3 ENSMUST00000203414.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_24489247_-/ATGT chr3:24489246-24489247 ATGT ENSMUSG00000102758.3 ENSMUST00000203414.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25234628_C/T chr3:25234628 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_25568430_GAGA/- chr3:25568430-25568433 - ENSMUSG00000063887.13 ENSMUST00000075054.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25568430_GAGA/- chr3:25568430-25568433 - ENSMUSG00000063887.13 ENSMUST00000108308.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25568430_GAGA/- chr3:25568430-25568433 - ENSMUSG00000063887.13 ENSMUST00000191835.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25568430_GAGA/- chr3:25568430-25568433 - ENSMUSG00000063887.13 ENSMUST00000193603.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25637490_AAGA/- chr3:25637490-25637493 - ENSMUSG00000063887.13 ENSMUST00000075054.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25637490_AAGA/- chr3:25637490-25637493 - ENSMUSG00000063887.13 ENSMUST00000108308.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25637490_AAGA/- chr3:25637490-25637493 - ENSMUSG00000063887.13 ENSMUST00000191835.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25637490_AAGA/- chr3:25637490-25637493 - ENSMUSG00000063887.13 ENSMUST00000193603.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25803430_-/TTTTT chr3:25803429-25803430 TTTTT ENSMUSG00000063887.13 ENSMUST00000075054.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25803430_-/TTTTT chr3:25803429-25803430 TTTTT ENSMUSG00000063887.13 ENSMUST00000108308.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25803430_-/TTTTT chr3:25803429-25803430 TTTTT ENSMUSG00000063887.13 ENSMUST00000191835.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_25803430_-/TTTTT chr3:25803429-25803430 TTTTT ENSMUSG00000063887.13 ENSMUST00000193603.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_26397392_T/A chr3:26397392 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_26400065_-/TCTTC chr3:26400064-26400065 TCTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_26601640_AC/TG chr3:26601640-26601641 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_26601644_A/G chr3:26601644 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_26602313_G/A chr3:26602313 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_27681600_ATAT/- chr3:27681600-27681603 - ENSMUSG00000039286.12 ENSMUST00000046157.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_27681600_ATAT/- chr3:27681600-27681603 - ENSMUSG00000039286.12 ENSMUST00000191684.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_27681600_ATAT/- chr3:27681600-27681603 - ENSMUSG00000039286.12 ENSMUST00000193779.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_27681600_ATAT/- chr3:27681600-27681603 - ENSMUSG00000039286.12 ENSMUST00000195008.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_27780761_GTGTGT/- chr3:27780761-27780766 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_28034477_-/G chr3:28034476-28034477 G ENSMUSG00000027695.16 ENSMUST00000067757.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_28034477_-/G chr3:28034476-28034477 G ENSMUSG00000027695.16 ENSMUST00000120834.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_28034477_-/G chr3:28034476-28034477 G ENSMUSG00000027695.16 ENSMUST00000123539.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_28034477_-/G chr3:28034476-28034477 G ENSMUSG00000027695.16 ENSMUST00000148827.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_28882645_T/G chr3:28882645 G ENSMUSG00000102482.1 ENSMUST00000195470.1 Transcript non_coding_transcript_exon_variant 2834 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 - ENSMUSG00000063600.14 ENSMUST00000118531.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 TG ENSMUSG00000063600.14 ENSMUST00000118531.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 - ENSMUSG00000063600.14 ENSMUST00000119598.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 TG ENSMUSG00000063600.14 ENSMUST00000119598.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 - ENSMUSG00000063600.14 ENSMUST00000126420.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 TG ENSMUSG00000063600.14 ENSMUST00000126420.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 - ENSMUSG00000063600.14 ENSMUST00000146943.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29389443_TGTG/-/TG chr3:29389443-29389446 TG ENSMUSG00000063600.14 ENSMUST00000146943.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29512418_AAA/- chr3:29512418-29512420 - ENSMUSG00000063600.14 ENSMUST00000118531.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29512418_AAA/- chr3:29512418-29512420 - ENSMUSG00000063600.14 ENSMUST00000119598.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29512418_AAA/- chr3:29512418-29512420 - ENSMUSG00000063600.14 ENSMUST00000126420.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29512418_AAA/- chr3:29512418-29512420 - ENSMUSG00000063600.14 ENSMUST00000140288.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1486;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29512418_AAA/- chr3:29512418-29512420 - ENSMUSG00000063600.14 ENSMUST00000143483.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29512418_AAA/- chr3:29512418-29512420 - ENSMUSG00000063600.14 ENSMUST00000146943.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_29754087_-/ACAC chr3:29754086-29754087 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_30506299_A/C chr3:30506299 C ENSMUSG00000027684.16 ENSMUST00000172697.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_30506299_A/C chr3:30506299 C ENSMUSG00000027684.16 ENSMUST00000172754.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_30506299_A/C chr3:30506299 C ENSMUSG00000027684.16 ENSMUST00000173022.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_30506299_A/C chr3:30506299 C ENSMUSG00000027684.16 ENSMUST00000173411.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_30506299_A/C chr3:30506299 C ENSMUSG00000027684.16 ENSMUST00000173495.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_30506299_A/C chr3:30506299 C ENSMUSG00000027684.16 ENSMUST00000173899.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_30506299_A/C chr3:30506299 C ENSMUSG00000103738.1 ENSMUST00000195290.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2486;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_30732273_AAAA/- chr3:30732273-30732276 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_30733984_T/G chr3:30733984 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_31544725_GTGT/- chr3:31544725-31544728 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_32168482_G/A chr3:32168482 A ENSMUSG00000037610.15 ENSMUST00000119310.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32168482_G/A chr3:32168482 A ENSMUSG00000037610.15 ENSMUST00000119970.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32168482_G/A chr3:32168482 A ENSMUSG00000037610.15 ENSMUST00000178668.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32168482_G/A chr3:32168482 A ENSMUSG00000037610.15 ENSMUST00000191869.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32168482_G/A chr3:32168482 A ENSMUSG00000037610.15 ENSMUST00000192429.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32168482_G/A chr3:32168482 A ENSMUSG00000037610.15 ENSMUST00000194796.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32368866_T/- chr3:32368866 - ENSMUSG00000027663.12 ENSMUST00000029199.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3188;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32368866_T/- chr3:32368866 - ENSMUSG00000027663.12 ENSMUST00000139660.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32368866_T/- chr3:32368866 - ENSMUSG00000027663.12 ENSMUST00000168566.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3246;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32368866_T/- chr3:32368866 - ENSMUSG00000102825.1 ENSMUST00000191961.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2712;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32368866_T/- chr3:32368866 - ENSMUSG00000027663.12 ENSMUST00000195055.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2852;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32376656_G/C chr3:32376656 C ENSMUSG00000102825.1 ENSMUST00000191961.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3667;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 - ENSMUSG00000027668.13 ENSMUST00000091257.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 T ENSMUSG00000027668.13 ENSMUST00000091257.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 - ENSMUSG00000027668.13 ENSMUST00000118286.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 T ENSMUSG00000027668.13 ENSMUST00000118286.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 - ENSMUSG00000027668.13 ENSMUST00000140328.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 T ENSMUSG00000027668.13 ENSMUST00000140328.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 - ENSMUSG00000027668.13 ENSMUST00000151320.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 T ENSMUSG00000027668.13 ENSMUST00000151320.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 - ENSMUSG00000027668.13 ENSMUST00000191661.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=885;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 T ENSMUSG00000027668.13 ENSMUST00000191661.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=885;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 - ENSMUSG00000027668.13 ENSMUST00000194384.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_32562022_TT/-/T chr3:32562022-32562023 T ENSMUSG00000027668.13 ENSMUST00000194384.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_33180300_-/CACACACACA chr3:33180299-33180300 CACACACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_34111533_-/TCTT chr3:34111532-34111533 TCTT ENSMUSG00000105265.4 ENSMUST00000196243.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34111533_-/TCTT chr3:34111532-34111533 TCTT ENSMUSG00000105265.4 ENSMUST00000196793.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34111533_-/TCTT chr3:34111532-34111533 TCTT ENSMUSG00000105265.4 ENSMUST00000198032.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4568;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34271847_A/C chr3:34271847 C ENSMUSG00000105265.4 ENSMUST00000196058.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34271847_A/C chr3:34271847 C ENSMUSG00000105265.4 ENSMUST00000196243.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34271847_A/C chr3:34271847 C ENSMUSG00000105265.4 ENSMUST00000196793.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34271847_A/C chr3:34271847 C ENSMUSG00000105265.4 ENSMUST00000200625.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000105265.4 ENSMUST00000196058.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000105265.4 ENSMUST00000196243.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000105265.4 ENSMUST00000196793.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000105265.4 ENSMUST00000196795.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000105265.4 ENSMUST00000197977.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000105265.4 ENSMUST00000198170.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000106525.1 ENSMUST00000199445.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34569440_ACAC/- chr3:34569440-34569443 - ENSMUSG00000105265.4 ENSMUST00000200414.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000196243.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000196243.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000196850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000196850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000196987.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000196987.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000197103.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000197103.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000197258.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000197258.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000197697.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000197697.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000197977.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000197977.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000198758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000198758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000199171.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000199171.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000200092.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000200092.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 - ENSMUSG00000105265.4 ENSMUST00000200414.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34672177_CACA/-/CA chr3:34672177-34672180 CA ENSMUSG00000105265.4 ENSMUST00000200414.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_34913941_GTGT/-/GT chr3:34913941-34913944 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_34913941_GTGT/-/GT chr3:34913941-34913944 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_35168910_AA/- chr3:35168910-35168911 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_35292352_G/T chr3:35292352 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_35717484_GGG/- chr3:35717484-35717486 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_36258334_A/T chr3:36258334 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_36266165_-/CTTT chr3:36266164-36266165 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_36801752_-/CA chr3:36801751-36801752 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_37429186_TT/- chr3:37429186-37429187 - ENSMUSG00000027722.14 ENSMUST00000029277.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_37429186_TT/- chr3:37429186-37429187 - ENSMUSG00000027722.14 ENSMUST00000108112.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_37429186_TT/- chr3:37429186-37429187 - ENSMUSG00000027722.14 ENSMUST00000124347.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2871;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_37429186_TT/- chr3:37429186-37429187 - ENSMUSG00000027722.14 ENSMUST00000138225.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3033;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_37429186_TT/- chr3:37429186-37429187 - ENSMUSG00000027722.14 ENSMUST00000147687.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3796;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_37429186_TT/- chr3:37429186-37429187 - ENSMUSG00000027722.14 ENSMUST00000198968.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_37650963_-/ATTT chr3:37650962-37650963 ATTT ENSMUSG00000106062.1 ENSMUST00000199414.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3010;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_38487168_TGTG/- chr3:38487168-38487171 - ENSMUSG00000044864.16 ENSMUST00000120875.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2324;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_38487168_TGTG/- chr3:38487168-38487171 - ENSMUSG00000044864.16 ENSMUST00000127837.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2353;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_38487168_TGTG/- chr3:38487168-38487171 - ENSMUSG00000044864.16 ENSMUST00000156038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4077;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_38565375_-/AAAT chr3:38565374-38565375 AAAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_38661465_GAGA/- chr3:38661465-38661468 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_39172161_T/C chr3:39172161 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_39189762_C/T chr3:39189762 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_39602082_G/C chr3:39602082 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_40113213_CCT/TCT/C chr3:40113213-40113215 TCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_40113213_CCT/TCT/C chr3:40113213-40113215 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_40429250_GATAGATA/- chr3:40429250-40429257 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_40724342_G/T chr3:40724342 T ENSMUSG00000069041.8 ENSMUST00000091184.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41123432_TGTG/-/TG/TGTGTG chr3:41123432-41123435 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_41123432_TGTG/-/TG/TGTGTG chr3:41123432-41123435 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_41123432_TGTG/-/TG/TGTGTG chr3:41123432-41123435 TGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_41404771_CACA/-/CA chr3:41404771-41404774 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_41404771_CACA/-/CA chr3:41404771-41404774 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000026865.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000163764.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000168086.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000170711.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000191952.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000193080.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000194181.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000194348.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000195200.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41583116_CACA/- chr3:41583116-41583119 - ENSMUSG00000025764.14 ENSMUST00000195846.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41628530_-/ATCC chr3:41628529-41628530 ATCC ENSMUSG00000059834.12 ENSMUST00000026866.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41628530_-/ATCC chr3:41628529-41628530 ATCC ENSMUSG00000059834.12 ENSMUST00000140373.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=872;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41628530_-/ATCC chr3:41628529-41628530 ATCC ENSMUSG00000059834.12 ENSMUST00000142908.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41628530_-/ATCC chr3:41628529-41628530 ATCC ENSMUSG00000059834.12 ENSMUST00000146125.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41628530_-/ATCC chr3:41628529-41628530 ATCC ENSMUSG00000059834.12 ENSMUST00000148769.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41681101_-/TATC chr3:41681100-41681101 TATC ENSMUSG00000059834.12 ENSMUST00000026866.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41681101_-/TATC chr3:41681100-41681101 TATC ENSMUSG00000059834.12 ENSMUST00000146125.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41681101_-/TATC chr3:41681100-41681101 TATC ENSMUSG00000059834.12 ENSMUST00000148769.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41681101_-/TATC chr3:41681100-41681101 TATC ENSMUSG00000059834.12 ENSMUST00000156279.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_41792418_A/T chr3:41792418 T ENSMUSG00000025766.14 ENSMUST00000193075.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_42375281_-/G chr3:42375280-42375281 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_42414974_AA/- chr3:42414974-42414975 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_42647166_CACA/- chr3:42647166-42647169 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43149128_T/C chr3:43149128 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43289492_TGTGTG/- chr3:43289492-43289497 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43329981_TCTC/-/TC chr3:43329981-43329984 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43329981_TCTC/-/TC chr3:43329981-43329984 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43386855_A/-/AA chr3:43386855 - ENSMUSG00000102334.1 ENSMUST00000193011.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3912;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_43386855_A/-/AA chr3:43386855 AA ENSMUSG00000102334.1 ENSMUST00000193011.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3912;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_43443881_G/C chr3:43443881 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43582603_TGTG/- chr3:43582603-43582606 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43890633_A/G chr3:43890633 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_43986485_-/AAGAA chr3:43986484-43986485 AAGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_44584165_TTT/-/TT chr3:44584165-44584167 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_44584165_TTT/-/TT chr3:44584165-44584167 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_44622903_CT/TG chr3:44622903-44622904 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_45160797_C/T chr3:45160797 T ENSMUSG00000099285.1 ENSMUST00000184721.1 Transcript non_coding_transcript_exon_variant 103 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_45160800_G/A chr3:45160800 A ENSMUSG00000099285.1 ENSMUST00000184721.1 Transcript non_coding_transcript_exon_variant 106 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_45407432_TCTA/- chr3:45407432-45407435 - ENSMUSG00000049100.15 ENSMUST00000166126.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_45407432_TCTA/- chr3:45407432-45407435 - ENSMUSG00000049100.15 ENSMUST00000170695.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_45407432_TCTA/- chr3:45407432-45407435 - ENSMUSG00000049100.15 ENSMUST00000171554.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4787;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_45407432_TCTA/- chr3:45407432-45407435 - ENSMUSG00000049100.15 ENSMUST00000195655.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_45826624_-/TA chr3:45826623-45826624 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_45903112_GTGT/- chr3:45903112-45903115 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_46362396_-/CA chr3:46362395-46362396 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_46425294_-/TTTC chr3:46425293-46425294 TTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_46606335_GTGT/-/GT chr3:46606335-46606338 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_46606335_GTGT/-/GT chr3:46606335-46606338 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_46706210_TTTTC/- chr3:46706210-46706214 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_46756936_-/AGAA chr3:46756935-46756936 AGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_46815205_-/TTC chr3:46815204-46815205 TTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_47096877_CTTT/- chr3:47096877-47096880 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_47456930_ACAC/-/ACACAC chr3:47456930-47456933 - ENSMUSG00000103798.1 ENSMUST00000193328.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2696;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_47456930_ACAC/-/ACACAC chr3:47456930-47456933 ACACAC ENSMUSG00000103798.1 ENSMUST00000193328.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2696;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_47481556_C/T chr3:47481556 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_47506894_-/TG chr3:47506893-47506894 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_48339152_CA/- chr3:48339152-48339153 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_48706741_T/C chr3:48706741 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_49205125_AA/-/AAA chr3:49205125-49205126 - ENSMUSG00000103027.1 ENSMUST00000192779.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2588;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_49205125_AA/-/AAA chr3:49205125-49205126 AAA ENSMUSG00000103027.1 ENSMUST00000192779.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2588;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_49234675_TCTC/- chr3:49234675-49234678 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_49661220_TT/-/TTT chr3:49661220-49661221 - ENSMUSG00000065381.1 ENSMUST00000083447.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2351;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_49661220_TT/-/TTT chr3:49661220-49661221 TTT ENSMUSG00000065381.1 ENSMUST00000083447.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2351;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_49777940_C/T chr3:49777940 T ENSMUSG00000102943.1 ENSMUST00000193230.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_49903659_CACA/-/CA chr3:49903659-49903662 - ENSMUSG00000027737.10 ENSMUST00000194462.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_49903659_CACA/-/CA chr3:49903659-49903662 CA ENSMUSG00000027737.10 ENSMUST00000194462.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_50100588_A/T chr3:50100588 T ENSMUSG00000027737.10 ENSMUST00000194462.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_50584300_-/AATAAATA chr3:50584299-50584300 AATAAATA ENSMUSG00000102715.1 ENSMUST00000193264.1 Transcript non_coding_transcript_exon_variant 77-78 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_50584300_-/AATAAATA chr3:50584299-50584300 AATAAATA ENSMUSG00000102715.1 ENSMUST00000194629.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51162771_AA/-/AAA chr3:51162771-51162772 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_51162771_AA/-/AAA chr3:51162771-51162772 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_51321077_C/T chr3:51321077 T ENSMUSG00000037174.18 ENSMUST00000062009.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51321077_C/T chr3:51321077 T ENSMUSG00000037174.18 ENSMUST00000163748.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51321077_C/T chr3:51321077 T ENSMUSG00000037174.18 ENSMUST00000183338.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51321077_C/T chr3:51321077 T ENSMUSG00000037174.18 ENSMUST00000183463.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51321077_C/T chr3:51321077 T ENSMUSG00000037174.18 ENSMUST00000194209.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51321077_C/T chr3:51321077 T ENSMUSG00000037174.18 ENSMUST00000194641.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51456203_T/A chr3:51456203 A ENSMUSG00000063273.11 ENSMUST00000029303.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51456203_T/A chr3:51456203 A ENSMUSG00000063273.11 ENSMUST00000192523.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51456203_T/A chr3:51456203 A ENSMUSG00000063273.11 ENSMUST00000193266.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51456203_T/A chr3:51456203 A ENSMUSG00000063273.11 ENSMUST00000193694.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3544;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51456203_T/A chr3:51456203 A ENSMUSG00000063273.11 ENSMUST00000194685.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4537;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51779996_ATAT/-/ATATAT chr3:51779996-51779999 - ENSMUSG00000061143.15 ENSMUST00000118075.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51779996_ATAT/-/ATATAT chr3:51779996-51779999 ATATAT ENSMUSG00000061143.15 ENSMUST00000118075.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51779996_ATAT/-/ATATAT chr3:51779996-51779999 - ENSMUSG00000061143.15 ENSMUST00000121440.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51779996_ATAT/-/ATATAT chr3:51779996-51779999 ATATAT ENSMUSG00000061143.15 ENSMUST00000121440.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_51934693_-/TTTTTTTTT chr3:51934692-51934693 TTTTTTTTT ENSMUSG00000061143.15 ENSMUST00000121440.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_52026249_C/T chr3:52026249 T ENSMUSG00000061143.15 ENSMUST00000121440.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_52073846_GTGT/- chr3:52073846-52073849 - ENSMUSG00000061143.15 ENSMUST00000121440.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_52073846_GTGT/- chr3:52073846-52073849 - ENSMUSG00000102808.1 ENSMUST00000194956.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=459;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_52083239_AA/-/AAA chr3:52083239-52083240 - ENSMUSG00000061143.15 ENSMUST00000121440.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_52083239_AA/-/AAA chr3:52083239-52083240 AAA ENSMUSG00000061143.15 ENSMUST00000121440.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_52717752_T/A chr3:52717752 A ENSMUSG00000065926.1 ENSMUST00000083992.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4897;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_52819351_TT/- chr3:52819351-52819352 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_53351522_GTGT/-/GT chr3:53351522-53351525 - ENSMUSG00000106660.1 ENSMUST00000200175.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_53351522_GTGT/-/GT chr3:53351522-53351525 GT ENSMUSG00000106660.1 ENSMUST00000200175.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_53638097_TCTC/-/TC chr3:53638097-53638100 - ENSMUSG00000037016.11 ENSMUST00000091137.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_53638097_TCTC/-/TC chr3:53638097-53638100 TC ENSMUSG00000037016.11 ENSMUST00000091137.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54104897_-/AA chr3:54104896-54104897 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_54152833_ACAC/- chr3:54152833-54152836 - ENSMUSG00000027748.11 ENSMUST00000029311.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54152833_ACAC/- chr3:54152833-54152836 - ENSMUSG00000027748.11 ENSMUST00000198444.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3199;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54152833_ACAC/- chr3:54152833-54152836 - ENSMUSG00000027748.11 ENSMUST00000199359.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3537;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54152833_ACAC/- chr3:54152833-54152836 - ENSMUSG00000027748.11 ENSMUST00000199399.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3230;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54152833_ACAC/- chr3:54152833-54152836 - ENSMUSG00000027748.11 ENSMUST00000200048.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3268;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54152833_ACAC/- chr3:54152833-54152836 - ENSMUSG00000027748.11 ENSMUST00000200341.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3779;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54153297_TA/- chr3:54153297-54153298 - ENSMUSG00000027748.11 ENSMUST00000029311.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2759;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54153297_TA/- chr3:54153297-54153298 - ENSMUSG00000027748.11 ENSMUST00000198444.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2737;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54153297_TA/- chr3:54153297-54153298 - ENSMUSG00000027748.11 ENSMUST00000199359.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3075;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54153297_TA/- chr3:54153297-54153298 - ENSMUSG00000027748.11 ENSMUST00000199399.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2768;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54153297_TA/- chr3:54153297-54153298 - ENSMUSG00000027748.11 ENSMUST00000200048.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2806;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54153297_TA/- chr3:54153297-54153298 - ENSMUSG00000027748.11 ENSMUST00000200341.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3317;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54277071_TT/-/TTT chr3:54277071-54277072 - ENSMUSG00000027748.11 ENSMUST00000029311.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54277071_TT/-/TTT chr3:54277071-54277072 TTT ENSMUSG00000027748.11 ENSMUST00000029311.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54277071_TT/-/TTT chr3:54277071-54277072 - ENSMUSG00000027748.11 ENSMUST00000200048.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54277071_TT/-/TTT chr3:54277071-54277072 TTT ENSMUSG00000027748.11 ENSMUST00000200048.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54277071_TT/-/TTT chr3:54277071-54277072 - ENSMUSG00000027748.11 ENSMUST00000200341.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54277071_TT/-/TTT chr3:54277071-54277072 TTT ENSMUSG00000027748.11 ENSMUST00000200341.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54638964_AA/- chr3:54638964-54638965 - ENSMUSG00000097599.1 ENSMUST00000181057.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4337;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54638964_AA/- chr3:54638964-54638965 - ENSMUSG00000104831.1 ENSMUST00000197444.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4396;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54780904_-/T chr3:54780903-54780904 T ENSMUSG00000027796.2 ENSMUST00000029371.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_54947648_-/TCTA chr3:54947647-54947648 TCTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_55023652_TCTC/- chr3:55023652-55023655 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_55079925_-/ATTT chr3:55079924-55079925 ATTT ENSMUSG00000106589.1 ENSMUST00000199770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_55389176_TTGCAC/- chr3:55389176-55389181 - ENSMUSG00000027797.15 ENSMUST00000054237.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_55389176_TTGCAC/- chr3:55389176-55389181 - ENSMUSG00000027797.15 ENSMUST00000167204.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_55389176_TTGCAC/- chr3:55389176-55389181 - ENSMUSG00000105975.4 ENSMUST00000196362.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_55389176_TTGCAC/- chr3:55389176-55389181 - ENSMUSG00000027797.15 ENSMUST00000196745.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_55389176_TTGCAC/- chr3:55389176-55389181 - ENSMUSG00000105975.4 ENSMUST00000196877.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_55389176_TTGCAC/- chr3:55389176-55389181 - ENSMUSG00000027797.15 ENSMUST00000197870.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_56127505_-/T chr3:56127504-56127505 T ENSMUSG00000027799.12 ENSMUST00000029374.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_56127505_-/T chr3:56127504-56127505 T ENSMUSG00000106211.1 ENSMUST00000197736.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1345;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_56127505_-/T chr3:56127504-56127505 T ENSMUSG00000106528.1 ENSMUST00000199806.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1091;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_56136294_C/T chr3:56136294 T ENSMUSG00000027799.12 ENSMUST00000029374.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_56878404_-/TTTTTTTTTTTT chr3:56878403-56878404 TTTTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_57975120_TCTCTG/- chr3:57975120-57975125 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_58599254_T/G chr3:58599254 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_58606524_AA/-/AAA chr3:58606524-58606525 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_58606524_AA/-/AAA chr3:58606524-58606525 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_58790728_G/C chr3:58790728 C ENSMUSG00000097725.4 ENSMUST00000181694.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_58790728_G/C chr3:58790728 C ENSMUSG00000101860.4 ENSMUST00000191174.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_58790728_G/C chr3:58790728 C ENSMUSG00000101860.4 ENSMUST00000191233.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_58790728_G/C chr3:58790728 C ENSMUSG00000097725.4 ENSMUST00000203879.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2204;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_58790728_G/C chr3:58790728 C ENSMUSG00000101860.4 ENSMUST00000212169.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_58959250_-/AAAG chr3:58959249-58959250 AAAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_59042522_T/C chr3:59042522 C ENSMUSG00000056476.13 ENSMUST00000029393.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042522_T/C chr3:59042522 C ENSMUSG00000056476.13 ENSMUST00000040325.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042522_T/C chr3:59042522 C ENSMUSG00000056476.13 ENSMUST00000040846.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042522_T/C chr3:59042522 C ENSMUSG00000056476.13 ENSMUST00000164225.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042522_T/C chr3:59042522 C ENSMUSG00000056476.13 ENSMUST00000199659.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042527_A/C chr3:59042527 C ENSMUSG00000056476.13 ENSMUST00000029393.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042527_A/C chr3:59042527 C ENSMUSG00000056476.13 ENSMUST00000040325.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042527_A/C chr3:59042527 C ENSMUSG00000056476.13 ENSMUST00000040846.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042527_A/C chr3:59042527 C ENSMUSG00000056476.13 ENSMUST00000164225.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59042527_A/C chr3:59042527 C ENSMUSG00000056476.13 ENSMUST00000199659.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59082525_-/TCTT chr3:59082524-59082525 TCTT ENSMUSG00000056476.13 ENSMUST00000029393.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59082525_-/TCTT chr3:59082524-59082525 TCTT ENSMUSG00000056476.13 ENSMUST00000040325.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59082525_-/TCTT chr3:59082524-59082525 TCTT ENSMUSG00000056476.13 ENSMUST00000040846.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59082525_-/TCTT chr3:59082524-59082525 TCTT ENSMUSG00000056476.13 ENSMUST00000164225.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59082525_-/TCTT chr3:59082524-59082525 TCTT ENSMUSG00000056476.13 ENSMUST00000199659.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59159447_TATC/- chr3:59159447-59159450 - ENSMUSG00000056476.13 ENSMUST00000040325.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59159447_TATC/- chr3:59159447-59159450 - ENSMUSG00000056476.13 ENSMUST00000164225.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59159447_TATC/- chr3:59159447-59159450 - ENSMUSG00000056476.13 ENSMUST00000199659.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59433127_-/TACCGCCAGCAATAGCACCAAACATAAATCACCTCACTTAAGTGGCTGGAGACAAATAATCTCTTTAATAACCTGATTCAGCGAAACCAATCCGCGGCATTTAGTAGCGGTAAAGTTAGACCAAACC chr3:59433126-59433127 TACCGCCAGCAATAGCACCAAACATAAATCACCTCACTTAAGTGGCTGGAGACAAATAATCTCTTTAATAACCTGATTCAGCGAAACCAATCCGCGGCATTTAGTAGCGGTAAAGTTAGACCAAACC ENSMUSG00000102550.1 ENSMUST00000192231.1 Transcript non_coding_transcript_exon_variant 1590-1591 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59768893_C/A/CA chr3:59768893 A ENSMUSG00000103986.1 ENSMUST00000192177.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=653;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_59768893_C/A/CA chr3:59768893 CA ENSMUSG00000103986.1 ENSMUST00000192177.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=653;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60029353_-/AGAA chr3:60029352-60029353 AGAA ENSMUSG00000027761.4 ENSMUST00000029325.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60029353_-/AGAA chr3:60029352-60029353 AGAA ENSMUSG00000027761.4 ENSMUST00000151605.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60029353_-/AGAA chr3:60029352-60029353 AGAA ENSMUSG00000091376.1 ENSMUST00000169794.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3932;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60029353_-/AGAA chr3:60029352-60029353 AGAA ENSMUSG00000027761.4 ENSMUST00000194896.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60291121_-/AGAGA chr3:60291120-60291121 AGAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000099087.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000191638.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000191747.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000192394.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000192607.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000192637.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000192807.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000193130.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000193517.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000193647.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000194069.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000194201.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000195001.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000195077.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60560182_TTTT/- chr3:60560182-60560185 - ENSMUSG00000027763.13 ENSMUST00000195724.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000099087.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000191638.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000191747.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000192394.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000192607.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000192637.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000192757.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2732;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000192807.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000193130.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000193517.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000193518.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2802;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000193647.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000194069.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000194201.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000195001.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000195077.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000195724.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592909_A/C chr3:60592909 C ENSMUSG00000027763.13 ENSMUST00000195817.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2802;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000099087.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000191638.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000191747.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000192394.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000192607.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000192637.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000192757.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2730;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000192807.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000193130.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000193517.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000193518.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2800;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000193647.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000194069.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000194201.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000195001.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000195077.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000195724.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_60592911_A/C chr3:60592911 C ENSMUSG00000027763.13 ENSMUST00000195817.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2800;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_61194144_GTGT/- chr3:61194144-61194147 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_61819209_C/A/CA chr3:61819209 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_61819209_C/A/CA chr3:61819209 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_61889392_AAGA/- chr3:61889392-61889395 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_62018753_C/A chr3:62018753 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_62487575_CC/- chr3:62487575-62487576 - ENSMUSG00000027770.5 ENSMUST00000029336.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_62487575_CC/- chr3:62487575-62487576 - ENSMUSG00000027770.5 ENSMUST00000162070.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_62780608_AA/- chr3:62780608-62780609 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_62985478_G/A chr3:62985478 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_63127579_-/GATAGATA chr3:63127578-63127579 GATAGATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_63160584_AGAG/- chr3:63160584-63160587 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000029400.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000191633.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000192002.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000193805.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000194134.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000194150.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000194324.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63301553_-/ACAC chr3:63301552-63301553 ACAC ENSMUSG00000027820.12 ENSMUST00000194836.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000029400.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000191633.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=641;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000192002.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=761;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000193805.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000194134.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000194150.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000194324.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1002;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63328828_GTGT/- chr3:63328828-63328831 - ENSMUSG00000027820.12 ENSMUST00000194836.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=633;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63477703_TCTC/-/TC chr3:63477703-63477706 - ENSMUSG00000103476.1 ENSMUST00000192926.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63477703_TCTC/-/TC chr3:63477703-63477706 TC ENSMUSG00000103476.1 ENSMUST00000192926.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63490617_C/A chr3:63490617 A ENSMUSG00000088957.1 ENSMUST00000158332.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1519;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63552154_-/TCTCTT chr3:63552153-63552154 TCTCTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_63563560_C/T chr3:63563560 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000048134.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000059973.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000084105.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000088360.1 ENSMUST00000157735.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3756;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000159676.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000160638.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000162269.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000175947.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63766453_GTGT/- chr3:63766453-63766456 - ENSMUSG00000036834.16 ENSMUST00000177143.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000048134.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000059973.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000084105.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000159188.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1855;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000159676.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000160638.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000162269.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000175947.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63779522_T/C chr3:63779522 C ENSMUSG00000036834.16 ENSMUST00000177143.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63881965_C/T chr3:63881965 T ENSMUSG00000036834.16 ENSMUST00000159188.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63881965_C/T chr3:63881965 T ENSMUSG00000036834.16 ENSMUST00000161052.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63881965_C/T chr3:63881965 T ENSMUSG00000036834.16 ENSMUST00000177143.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63889811_AGATAGAT/- chr3:63889811-63889818 - ENSMUSG00000036834.16 ENSMUST00000159188.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63889811_AGATAGAT/- chr3:63889811-63889818 - ENSMUSG00000036834.16 ENSMUST00000161052.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_63889811_AGATAGAT/- chr3:63889811-63889818 - ENSMUSG00000036834.16 ENSMUST00000177143.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64514750_C/A chr3:64514750 A ENSMUSG00000068999.13 ENSMUST00000177184.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4908;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718290_AGAA/- chr3:64718290-64718293 - ENSMUSG00000062200.14 ENSMUST00000050123.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718290_AGAA/- chr3:64718290-64718293 - ENSMUSG00000062200.14 ENSMUST00000161972.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718290_AGAA/- chr3:64718290-64718293 - ENSMUSG00000062200.14 ENSMUST00000168072.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718290_AGAA/- chr3:64718290-64718293 - ENSMUSG00000097538.1 ENSMUST00000177146.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718290_AGAA/- chr3:64718290-64718293 - ENSMUSG00000062200.14 ENSMUST00000233255.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718401_-/AAGG chr3:64718400-64718401 AAGG ENSMUSG00000062200.14 ENSMUST00000050123.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718401_-/AAGG chr3:64718400-64718401 AAGG ENSMUSG00000062200.14 ENSMUST00000161972.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718401_-/AAGG chr3:64718400-64718401 AAGG ENSMUSG00000062200.14 ENSMUST00000168072.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718401_-/AAGG chr3:64718400-64718401 AAGG ENSMUSG00000097538.1 ENSMUST00000177146.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64718401_-/AAGG chr3:64718400-64718401 AAGG ENSMUSG00000062200.14 ENSMUST00000233255.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_64954136_AGAT/- chr3:64954136-64954139 - ENSMUSG00000102437.1 ENSMUST00000193778.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65234746_GTGTGT/- chr3:65234746-65234751 - ENSMUSG00000027827.16 ENSMUST00000049230.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65234746_GTGTGT/- chr3:65234746-65234751 - ENSMUSG00000027827.16 ENSMUST00000159525.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65234746_GTGTGT/- chr3:65234746-65234751 - ENSMUSG00000027827.16 ENSMUST00000161404.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65234746_GTGTGT/- chr3:65234746-65234751 - ENSMUSG00000104093.1 ENSMUST00000195685.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65313585_G/C chr3:65313585 C ENSMUSG00000027827.16 ENSMUST00000049230.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65313585_G/C chr3:65313585 C ENSMUSG00000027827.16 ENSMUST00000159525.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65313585_G/C chr3:65313585 C ENSMUSG00000027827.16 ENSMUST00000160136.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65313585_G/C chr3:65313585 C ENSMUSG00000027827.16 ENSMUST00000161404.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65313585_G/C chr3:65313585 C ENSMUSG00000027827.16 ENSMUST00000161979.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65351424_-/GATA chr3:65351423-65351424 GATA ENSMUSG00000027827.16 ENSMUST00000049230.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65351424_-/GATA chr3:65351423-65351424 GATA ENSMUSG00000027827.16 ENSMUST00000159525.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65351424_-/GATA chr3:65351423-65351424 GATA ENSMUSG00000027827.16 ENSMUST00000160136.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65351424_-/GATA chr3:65351423-65351424 GATA ENSMUSG00000090120.1 ENSMUST00000160137.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1994;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65351424_-/GATA chr3:65351423-65351424 GATA ENSMUSG00000027827.16 ENSMUST00000161404.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65351424_-/GATA chr3:65351423-65351424 GATA ENSMUSG00000027827.16 ENSMUST00000161956.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2343;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65351424_-/GATA chr3:65351423-65351424 GATA ENSMUSG00000027827.16 ENSMUST00000161979.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 - ENSMUSG00000027827.16 ENSMUST00000049230.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 TGTGTGTG ENSMUSG00000027827.16 ENSMUST00000049230.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 - ENSMUSG00000027827.16 ENSMUST00000159525.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 TGTGTGTG ENSMUSG00000027827.16 ENSMUST00000159525.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 - ENSMUSG00000027827.16 ENSMUST00000160136.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 TGTGTGTG ENSMUSG00000027827.16 ENSMUST00000160136.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 - ENSMUSG00000090120.1 ENSMUST00000160137.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3918;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 TGTGTGTG ENSMUSG00000090120.1 ENSMUST00000160137.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3918;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 - ENSMUSG00000027827.16 ENSMUST00000161404.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 TGTGTGTG ENSMUSG00000027827.16 ENSMUST00000161404.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 - ENSMUSG00000027827.16 ENSMUST00000161956.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=417;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 TGTGTGTG ENSMUSG00000027827.16 ENSMUST00000161956.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=417;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 - ENSMUSG00000027827.16 ENSMUST00000161979.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65353347_TGTG/-/TGTGTGTG chr3:65353347-65353350 TGTGTGTG ENSMUSG00000027827.16 ENSMUST00000161979.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65636045_T/C chr3:65636045 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_65661273_G/T chr3:65661273 T ENSMUSG00000074579.13 ENSMUST00000099075.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4955;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65661273_G/T chr3:65661273 T ENSMUSG00000074579.13 ENSMUST00000107848.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65661273_G/T chr3:65661273 T ENSMUSG00000074579.13 ENSMUST00000161794.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4973;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65661273_G/T chr3:65661273 T ENSMUSG00000098944.1 ENSMUST00000185035.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1847;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65661273_G/T chr3:65661273 T ENSMUSG00000074579.13 ENSMUST00000195559.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4995;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65777734_-/CTTT chr3:65777733-65777734 CTTT ENSMUSG00000074579.13 ENSMUST00000161534.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4448;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_65777734_-/CTTT chr3:65777733-65777734 CTTT ENSMUSG00000074579.13 ENSMUST00000177434.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66029276_CTAT/- chr3:66029276-66029279 - ENSMUSG00000103369.1 ENSMUST00000192096.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=261;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66068133_-/ATCT chr3:66068132-66068133 ATCT ENSMUSG00000027831.9 ENSMUST00000029419.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66068133_-/ATCT chr3:66068132-66068133 ATCT ENSMUSG00000027831.9 ENSMUST00000107837.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66239836_C/T chr3:66239836 T ENSMUSG00000027831.9 ENSMUST00000029419.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66239836_C/T chr3:66239836 T ENSMUSG00000027831.9 ENSMUST00000182815.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4162;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66318768_-/ATCTATCT chr3:66318767-66318768 ATCTATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_66555420_-/TCTT chr3:66555419-66555420 TCTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_66762863_ACAC/- chr3:66762863-66762866 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_66786994_-/GATA chr3:66786993-66786994 GATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_66830026_G/T chr3:66830026 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_66971631_-/G chr3:66971630-66971631 G ENSMUSG00000027833.16 ENSMUST00000029422.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=151;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66971631_-/G chr3:66971630-66971631 G ENSMUSG00000027833.16 ENSMUST00000162060.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1149;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66971631_-/G chr3:66971630-66971631 G ENSMUSG00000027833.16 ENSMUST00000162098.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=96;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66971631_-/G chr3:66971630-66971631 G ENSMUSG00000027833.16 ENSMUST00000162439.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1628;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_66971631_-/G chr3:66971630-66971631 G ENSMUSG00000027833.16 ENSMUST00000195261.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2267;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67179339_A/T chr3:67179339 T ENSMUSG00000034544.17 ENSMUST00000046542.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67179339_A/T chr3:67179339 T ENSMUSG00000034544.17 ENSMUST00000065047.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67179339_A/T chr3:67179339 T ENSMUSG00000034544.17 ENSMUST00000065074.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67179339_A/T chr3:67179339 T ENSMUSG00000034544.17 ENSMUST00000161726.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67179339_A/T chr3:67179339 T ENSMUSG00000034544.17 ENSMUST00000162036.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67179339_A/T chr3:67179339 T ENSMUSG00000034544.17 ENSMUST00000162693.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67605678_-/CTTT chr3:67605677-67605678 CTTT ENSMUSG00000027775.9 ENSMUST00000029344.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1440;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67605678_-/CTTT chr3:67605677-67605678 CTTT ENSMUSG00000103206.1 ENSMUST00000194852.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1528;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_67717457_CTTTCTTT/- chr3:67717457-67717464 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_68257523_-/TGTG chr3:68257522-68257523 TGTG ENSMUSG00000027777.15 ENSMUST00000029346.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68257523_-/TGTG chr3:68257522-68257523 TGTG ENSMUSG00000027777.15 ENSMUST00000169909.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68257523_-/TGTG chr3:68257522-68257523 TGTG ENSMUSG00000102422.1 ENSMUST00000182006.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68393911_AAAAC/- chr3:68393911-68393915 - ENSMUSG00000027777.15 ENSMUST00000029346.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68393911_AAAAC/- chr3:68393911-68393915 - ENSMUSG00000027777.15 ENSMUST00000169909.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68393911_AAAAC/- chr3:68393911-68393915 - ENSMUSG00000102422.1 ENSMUST00000182006.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68485050_ATAATA/- chr3:68485050-68485055 - ENSMUSG00000027777.15 ENSMUST00000029346.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68485050_ATAATA/- chr3:68485050-68485055 - ENSMUSG00000027777.15 ENSMUST00000169909.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68485050_ATAATA/- chr3:68485050-68485055 - ENSMUSG00000102422.1 ENSMUST00000182006.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68485050_ATAATA/- chr3:68485050-68485055 - ENSMUSG00000027777.15 ENSMUST00000182532.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000027777.15 ENSMUST00000029346.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000027777.15 ENSMUST00000169909.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000027777.15 ENSMUST00000170788.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000102422.1 ENSMUST00000182006.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000027777.15 ENSMUST00000182532.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000027777.15 ENSMUST00000182719.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000027777.15 ENSMUST00000182997.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68610458_-/AGAAAGAA chr3:68610457-68610458 AGAAAGAA ENSMUSG00000027777.15 ENSMUST00000192555.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000027777.15 ENSMUST00000029346.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000027777.15 ENSMUST00000169909.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000027777.15 ENSMUST00000170788.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000102422.1 ENSMUST00000182006.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000027777.15 ENSMUST00000182532.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000027777.15 ENSMUST00000182719.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000027777.15 ENSMUST00000182997.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68619997_C/A chr3:68619997 A ENSMUSG00000027777.15 ENSMUST00000192555.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1338;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68687163_-/TTTC chr3:68687162-68687163 TTTC ENSMUSG00000027776.12 ENSMUST00000029345.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3481;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68687163_-/TTTC chr3:68687162-68687163 TTTC ENSMUSG00000027776.12 ENSMUST00000107816.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4261;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68687163_-/TTTC chr3:68687162-68687163 TTTC ENSMUSG00000027776.12 ENSMUST00000195408.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4364;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68687987_C/G chr3:68687987 G ENSMUSG00000027776.12 ENSMUST00000029345.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2657;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68687987_C/G chr3:68687987 G ENSMUSG00000027776.12 ENSMUST00000107816.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3437;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68687987_C/G chr3:68687987 G ENSMUSG00000027776.12 ENSMUST00000195408.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3540;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68715746_AA/- chr3:68715746-68715747 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_68755643_TGTG/-/TG chr3:68755643-68755646 - ENSMUSG00000102677.1 ENSMUST00000194463.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4260;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68755643_TGTG/-/TG chr3:68755643-68755646 TG ENSMUSG00000102677.1 ENSMUST00000194463.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4260;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68847896_AGAAAGAA/- chr3:68847896-68847903 - ENSMUSG00000102853.1 ENSMUST00000195818.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=493;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68847896_AGAAAGAA/- chr3:68847896-68847903 - ENSMUSG00000103218.1 ENSMUST00000195850.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=490;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68920282_G/T chr3:68920282 T ENSMUSG00000027778.15 ENSMUST00000029347.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68920282_G/T chr3:68920282 T ENSMUSG00000027778.15 ENSMUST00000107812.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68920282_G/T chr3:68920282 T ENSMUSG00000027778.15 ENSMUST00000136176.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=177;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68920282_G/T chr3:68920282 T ENSMUSG00000027778.15 ENSMUST00000136448.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68920282_G/T chr3:68920282 T ENSMUSG00000027778.15 ENSMUST00000152502.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68920282_G/T chr3:68920282 T ENSMUSG00000027778.15 ENSMUST00000169064.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_68920282_G/T chr3:68920282 T ENSMUSG00000111756.1 ENSMUST00000217619.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2959;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69123830_G/A chr3:69123830 A ENSMUSG00000027782.10 ENSMUST00000029353.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69123830_G/A chr3:69123830 A ENSMUSG00000027782.10 ENSMUST00000127497.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69123830_G/A chr3:69123830 A ENSMUSG00000103094.1 ENSMUST00000193684.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1106;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69123830_G/A chr3:69123830 A ENSMUSG00000027782.10 ENSMUST00000194558.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69140326_TT/- chr3:69140326-69140327 - ENSMUSG00000094763.3 ENSMUST00000195406.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69151707_TCTC/- chr3:69151707-69151710 - ENSMUSG00000094763.3 ENSMUST00000195406.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69153009_A/G chr3:69153009 G ENSMUSG00000094763.3 ENSMUST00000195406.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69153251_CTTCT/- chr3:69153251-69153255 - ENSMUSG00000094763.3 ENSMUST00000195406.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69238798_-/TCTC chr3:69238797-69238798 TCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_69266105_-/TG chr3:69266104-69266105 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_69687651_-/TCTTTCTTTCTT chr3:69687650-69687651 TCTTTCTTTCTT ENSMUSG00000087848.1 ENSMUST00000157223.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2070;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69736461_CACA/- chr3:69736461-69736464 - ENSMUSG00000027787.14 ENSMUST00000029358.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69736461_CACA/- chr3:69736461-69736464 - ENSMUSG00000027787.14 ENSMUST00000127211.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4485;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69736461_CACA/- chr3:69736461-69736464 - ENSMUSG00000027787.14 ENSMUST00000143041.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1372;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69736461_CACA/- chr3:69736461-69736464 - ENSMUSG00000027787.14 ENSMUST00000194168.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69738113_ACAC/- chr3:69738113-69738116 - ENSMUSG00000027787.14 ENSMUST00000029358.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69738113_ACAC/- chr3:69738113-69738116 - ENSMUSG00000027787.14 ENSMUST00000143041.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3024;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69738113_ACAC/- chr3:69738113-69738116 - ENSMUSG00000027787.14 ENSMUST00000194168.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69778956_-/TGTG chr3:69778955-69778956 TGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_69824752_GAGA/- chr3:69824752-69824755 - ENSMUSG00000043461.13 ENSMUST00000051239.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69824752_GAGA/- chr3:69824752-69824755 - ENSMUSG00000043461.13 ENSMUST00000171529.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69958166_AAGAAGAAGAAGAAG/- chr3:69958166-69958180 - ENSMUSG00000077366.1 ENSMUST00000104178.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4135;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_69958166_AAGAAGAAGAAGAAG/- chr3:69958166-69958180 - ENSMUSG00000103549.1 ENSMUST00000194028.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2484;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_70017723_C/A chr3:70017723 A ENSMUSG00000027788.6 ENSMUST00000053013.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_70126073_CTAT/- chr3:70126073-70126076 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_70155041_-/TATC chr3:70155040-70155041 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_70275733_T/C chr3:70275733 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_70486935_CTTCT/- chr3:70486935-70486939 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_70523210_TATC/- chr3:70523210-70523213 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_70545113_-/T chr3:70545112-70545113 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_70549228_-/AG chr3:70549227-70549228 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_71285285_G/A chr3:71285285 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_71285291_G/A chr3:71285291 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_71476331_A/- chr3:71476331 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_71572520_-/G chr3:71572519-71572520 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_71744249_C/A chr3:71744249 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_71884735_T/C chr3:71884735 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_72110523_-/ATAC chr3:72110522-72110523 ATAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_72181120_-/AGAA chr3:72181119-72181120 AGAA ENSMUSG00000103859.1 ENSMUST00000192368.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=164;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_72242282_C/A chr3:72242282 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_72372544_TAGA/- chr3:72372544-72372547 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_72502050_A/G chr3:72502050 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_72609224_T/A chr3:72609224 A ENSMUSG00000103078.1 ENSMUST00000195107.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4876;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_72680750_AAGAAAGA/- chr3:72680750-72680757 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_72724260_-/TA chr3:72724259-72724260 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_72736835_T/- chr3:72736835 - ENSMUSG00000084752.1 ENSMUST00000122803.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=996;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_72880534_-/AAGA chr3:72880533-72880534 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_73029415_T/C chr3:73029415 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_73038527_-/GATA chr3:73038526-73038527 GATA ENSMUSG00000102753.1 ENSMUST00000192141.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3448;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73117413_G/A chr3:73117413 A ENSMUSG00000103428.1 ENSMUST00000192263.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73117413_G/A chr3:73117413 A ENSMUSG00000103428.1 ENSMUST00000192642.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73146319_-/AACAAC chr3:73146318-73146319 AACAAC ENSMUSG00000077050.1 ENSMUST00000103862.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=530;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73146319_-/AACAAC chr3:73146318-73146319 AACAAC ENSMUSG00000103428.1 ENSMUST00000192263.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73146319_-/AACAAC chr3:73146318-73146319 AACAAC ENSMUSG00000103428.1 ENSMUST00000192642.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73238670_CTTT/- chr3:73238670-73238673 - ENSMUSG00000103428.1 ENSMUST00000192642.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73278625_-/AAGA chr3:73278624-73278625 AAGA ENSMUSG00000103428.1 ENSMUST00000192642.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73691287_AA/-/AAA chr3:73691287-73691288 - ENSMUSG00000027792.11 ENSMUST00000029367.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73691287_AA/-/AAA chr3:73691287-73691288 AAA ENSMUSG00000027792.11 ENSMUST00000029367.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73691287_AA/-/AAA chr3:73691287-73691288 - ENSMUSG00000027792.11 ENSMUST00000133690.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_73691287_AA/-/AAA chr3:73691287-73691288 AAA ENSMUSG00000027792.11 ENSMUST00000133690.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_74170221_A/T chr3:74170221 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_74756397_TTTT/- chr3:74756397-74756400 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_75277761_AGAGAG/- chr3:75277761-75277766 - ENSMUSG00000104301.3 ENSMUST00000193989.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75444109_GATA/- chr3:75444109-75444112 - ENSMUSG00000104301.3 ENSMUST00000193989.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75444109_GATA/- chr3:75444109-75444112 - ENSMUSG00000104301.3 ENSMUST00000203169.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75444109_GATA/- chr3:75444109-75444112 - ENSMUSG00000104301.3 ENSMUST00000204341.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75481113_TGTG/- chr3:75481113-75481116 - ENSMUSG00000104301.3 ENSMUST00000193989.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75481113_TGTG/- chr3:75481113-75481116 - ENSMUSG00000104301.3 ENSMUST00000203169.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75481113_TGTG/- chr3:75481113-75481116 - ENSMUSG00000104301.3 ENSMUST00000204982.1 Transcript non_coding_transcript_exon_variant 832-835 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75611779_GTGT/- chr3:75611779-75611782 - ENSMUSG00000027834.15 ENSMUST00000029423.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75611779_GTGT/- chr3:75611779-75611782 - ENSMUSG00000027834.15 ENSMUST00000161695.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75611779_GTGT/- chr3:75611779-75611782 - ENSMUSG00000027834.15 ENSMUST00000161776.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75611779_GTGT/- chr3:75611779-75611782 - ENSMUSG00000027834.15 ENSMUST00000195285.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=107;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_75688157_TGTG/-/TG chr3:75688157-75688160 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_75688157_TGTG/-/TG chr3:75688157-75688160 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_75790109_CC/- chr3:75790109-75790110 - ENSMUSG00000100962.3 ENSMUST00000189155.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2456;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_76017628_TT/- chr3:76017628-76017629 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_76193526_TGTG/- chr3:76193526-76193529 - ENSMUSG00000034098.14 ENSMUST00000038364.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_76193526_TGTG/- chr3:76193526-76193529 - ENSMUSG00000034098.14 ENSMUST00000159686.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_76193526_TGTG/- chr3:76193526-76193529 - ENSMUSG00000034098.14 ENSMUST00000160261.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_76756550_TTTT/-/TTTTT chr3:76756550-76756553 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_76756550_TTTT/-/TTTTT chr3:76756550-76756553 TTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_76962501_ACAC/- chr3:76962501-76962504 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_77093810_T/C chr3:77093810 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_77119571_ACAC/- chr3:77119571-77119574 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_77221832_TT/-/TTT chr3:77221832-77221833 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_77221832_TT/-/TTT chr3:77221832-77221833 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_77673502_G/A chr3:77673502 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_77673510_T/C chr3:77673510 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_77844347_ACAC/- chr3:77844347-77844350 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_78325130_-/AGAA chr3:78325129-78325130 AGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_78341912_T/G chr3:78341912 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_78639798_AAAA/-/AA/AAAAA chr3:78639798-78639801 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_78639798_AAAA/-/AA/AAAAA chr3:78639798-78639801 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_78639798_AAAA/-/AA/AAAAA chr3:78639798-78639801 AAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 - ENSMUSG00000062232.14 ENSMUST00000118100.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 AT ENSMUSG00000062232.14 ENSMUST00000118100.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 ATATAT ENSMUSG00000062232.14 ENSMUST00000118100.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 - ENSMUSG00000062232.14 ENSMUST00000118340.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 AT ENSMUSG00000062232.14 ENSMUST00000118340.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 ATATAT ENSMUSG00000062232.14 ENSMUST00000118340.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 - ENSMUSG00000062232.14 ENSMUST00000195708.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 AT ENSMUSG00000062232.14 ENSMUST00000195708.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79085520_ATAT/-/AT/ATATAT chr3:79085520-79085523 ATATAT ENSMUSG00000062232.14 ENSMUST00000195708.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79634257_G/C chr3:79634257 C ENSMUSG00000027811.9 ENSMUST00000029388.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1437;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79634257_G/C chr3:79634257 C ENSMUSG00000027809.14 ENSMUST00000194620.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4757;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79719071_ACAC/- chr3:79719071-79719074 - ENSMUSG00000034009.14 ENSMUST00000078527.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79719071_ACAC/- chr3:79719071-79719074 - ENSMUSG00000034009.14 ENSMUST00000182491.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_79756272_C/G chr3:79756272 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_80166641_C/A chr3:80166641 A ENSMUSG00000103181.1 ENSMUST00000194077.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80395043_T/A chr3:80395043 A ENSMUSG00000087123.1 ENSMUST00000145087.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4306;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80540487_CTCT/-/CT/CTCTCT chr3:80540487-80540490 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_80540487_CTCT/-/CT/CTCTCT chr3:80540487-80540490 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_80540487_CTCT/-/CT/CTCTCT chr3:80540487-80540490 CTCTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_80615590_GAA/G/AAA/GAAA chr3:80615590-80615592 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_80615590_GAA/G/AAA/GAAA chr3:80615590-80615592 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_80615590_GAA/G/AAA/GAAA chr3:80615590-80615592 GAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_80872375_TT/- chr3:80872375-80872376 - ENSMUSG00000028020.16 ENSMUST00000029654.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80872375_TT/- chr3:80872375-80872376 - ENSMUSG00000028020.16 ENSMUST00000107743.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80872375_TT/- chr3:80872375-80872376 - ENSMUSG00000028020.16 ENSMUST00000132330.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80872375_TT/- chr3:80872375-80872376 - ENSMUSG00000028020.16 ENSMUST00000135043.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80872375_TT/- chr3:80872375-80872376 - ENSMUSG00000028020.16 ENSMUST00000194085.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80964953_-/TATATATA chr3:80964952-80964953 TATATATA ENSMUSG00000105092.1 ENSMUST00000200360.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_80965876_T/G chr3:80965876 G ENSMUSG00000105092.1 ENSMUST00000200360.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_81367386_A/G chr3:81367386 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_81823372_G/C chr3:81823372 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_82437279_AGAG/- chr3:82437279-82437282 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_83225257_A/C chr3:83225257 C ENSMUSG00000102692.1 ENSMUST00000191829.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_85279124_TGTA/- chr3:85279124-85279127 - ENSMUSG00000102805.5 ENSMUST00000154148.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_85748290_TATA/-/TA chr3:85748290-85748293 - ENSMUSG00000051000.17 ENSMUST00000118408.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2024;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_85748290_TATA/-/TA chr3:85748290-85748293 TA ENSMUSG00000051000.17 ENSMUST00000118408.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2024;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_85748290_TATA/-/TA chr3:85748290-85748293 - ENSMUSG00000051000.17 ENSMUST00000119077.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_85748290_TATA/-/TA chr3:85748290-85748293 TA ENSMUSG00000051000.17 ENSMUST00000119077.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_85748290_TATA/-/TA chr3:85748290-85748293 - ENSMUSG00000102805.5 ENSMUST00000154148.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_85748290_TATA/-/TA chr3:85748290-85748293 TA ENSMUSG00000102805.5 ENSMUST00000154148.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86636757_G/A chr3:86636757 A ENSMUSG00000028080.16 ENSMUST00000107635.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86636757_G/A chr3:86636757 A ENSMUSG00000028080.16 ENSMUST00000192145.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86636757_G/A chr3:86636757 A ENSMUSG00000028080.16 ENSMUST00000194759.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86636757_G/A chr3:86636757 A ENSMUSG00000028080.16 ENSMUST00000195524.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86885848_-/TTTTTTTTTTTTTTTTTT chr3:86885847-86885848 TTTTTTTTTTTTTTTTTT ENSMUSG00000028078.14 ENSMUST00000029719.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86885848_-/TTTTTTTTTTTTTTTTTT chr3:86885847-86885848 TTTTTTTTTTTTTTTTTT ENSMUSG00000028078.14 ENSMUST00000191752.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86885848_-/TTTTTTTTTTTTTTTTTT chr3:86885847-86885848 TTTTTTTTTTTTTTTTTT ENSMUSG00000028078.14 ENSMUST00000192773.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86885848_-/TTTTTTTTTTTTTTTTTT chr3:86885847-86885848 TTTTTTTTTTTTTTTTTT ENSMUSG00000028078.14 ENSMUST00000193632.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86885848_-/TTTTTTTTTTTTTTTTTT chr3:86885847-86885848 TTTTTTTTTTTTTTTTTT ENSMUSG00000028078.14 ENSMUST00000194452.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_86885848_-/TTTTTTTTTTTTTTTTTT chr3:86885847-86885848 TTTTTTTTTTTTTTTTTT ENSMUSG00000028078.14 ENSMUST00000195561.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 A ENSMUSG00000041977.18 ENSMUST00000039476.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 TA ENSMUSG00000041977.18 ENSMUST00000039476.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 A ENSMUSG00000041977.18 ENSMUST00000129113.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 TA ENSMUSG00000041977.18 ENSMUST00000129113.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 A ENSMUSG00000041977.18 ENSMUST00000136072.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 TA ENSMUSG00000041977.18 ENSMUST00000136072.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 A ENSMUSG00000041977.18 ENSMUST00000142799.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 TA ENSMUSG00000041977.18 ENSMUST00000142799.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 A ENSMUSG00000041977.18 ENSMUST00000152006.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 TA ENSMUSG00000041977.18 ENSMUST00000152006.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 A ENSMUSG00000041977.18 ENSMUST00000212015.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2416;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87691266_T/A/TA chr3:87691266 TA ENSMUSG00000041977.18 ENSMUST00000212015.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2416;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_87891312_TT/- chr3:87891312-87891313 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_89645025_GAGAGAGA/-/GAGAGA chr3:89645025-89645032 - ENSMUSG00000000794.9 ENSMUST00000000811.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_89645025_GAGAGAGA/-/GAGAGA chr3:89645025-89645032 GAGAGA ENSMUSG00000000794.9 ENSMUST00000000811.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_89970919_AA/- chr3:89970919-89970920 - ENSMUSG00000065045.1 ENSMUST00000083111.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2756;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_89970919_AA/- chr3:89970919-89970920 - ENSMUSG00000105082.2 ENSMUST00000199555.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2261;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_91301696_C/A chr3:91301696 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_92248900_TCTCTCTC/- chr3:92248900-92248907 - ENSMUSG00000068893.5 ENSMUST00000071805.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1840;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_92248900_TCTCTCTC/- chr3:92248900-92248907 - ENSMUSG00000068893.5 ENSMUST00000090871.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_92248900_TCTCTCTC/- chr3:92248900-92248907 - ENSMUSG00000103187.1 ENSMUST00000192966.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_92554184_A/G chr3:92554184 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_93112863_ACAC/- chr3:93112863-93112866 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_93124237_G/C chr3:93124237 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_93205577_A/T chr3:93205577 T ENSMUSG00000049133.7 ENSMUST00000098884.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_93205577_A/T chr3:93205577 T ENSMUSG00000049133.7 ENSMUST00000194707.2 Transcript non_coding_transcript_exon_variant 4989 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_93218654_T/G chr3:93218654 G ENSMUSG00000049133.7 ENSMUST00000098884.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_93218654_T/G chr3:93218654 G ENSMUSG00000049133.7 ENSMUST00000194707.2 Transcript non_coding_transcript_exon_variant 18066 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_93265546_-/AAAAC chr3:93265545-93265546 AAAAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_93735355_-/ATTTATTT chr3:93735354-93735355 ATTTATTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_94382065_AA/- chr3:94382065-94382066 - ENSMUSG00000028150.14 ENSMUST00000029795.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94382065_AA/- chr3:94382065-94382066 - ENSMUSG00000028150.14 ENSMUST00000197040.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94382065_AA/- chr3:94382065-94382066 - ENSMUSG00000104669.1 ENSMUST00000197971.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4820;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94382065_AA/- chr3:94382065-94382066 - ENSMUSG00000028150.14 ENSMUST00000198793.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94382065_AA/- chr3:94382065-94382066 - ENSMUSG00000028150.14 ENSMUST00000200009.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94831546_T/C chr3:94831546 C ENSMUSG00000084058.1 ENSMUST00000121556.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1431;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000029772.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000029772.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000107253.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=797;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000107253.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=797;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000107254.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=797;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000107254.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=797;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000107255.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2540;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000107255.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2540;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000107260.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2650;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000107260.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2650;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000087660.1 ENSMUST00000125186.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=98;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000087660.1 ENSMUST00000125186.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=98;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000137088.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000137088.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000140331.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4998;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000140331.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4998;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000144132.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=797;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000144132.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=797;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 - ENSMUSG00000005774.12 ENSMUST00000148803.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=800;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_94962146_TT/-/TTT chr3:94962146-94962147 TTT ENSMUSG00000005774.12 ENSMUST00000148803.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=800;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000046722.14 ENSMUST00000053872.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000053192.9 ENSMUST00000065482.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1274;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000046722.14 ENSMUST00000107199.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2342;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000046722.14 ENSMUST00000107200.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2336;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000046722.14 ENSMUST00000107201.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000046722.14 ENSMUST00000149804.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000097167.1 ENSMUST00000181819.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3293;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000053192.9 ENSMUST00000196025.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000053192.9 ENSMUST00000198087.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000053192.9 ENSMUST00000198948.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229951_A/C chr3:95229951 C ENSMUSG00000053192.9 ENSMUST00000199917.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000046722.14 ENSMUST00000053872.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000053192.9 ENSMUST00000065482.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1279;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000046722.14 ENSMUST00000107199.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2337;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000046722.14 ENSMUST00000107200.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2331;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000046722.14 ENSMUST00000107201.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000046722.14 ENSMUST00000149804.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000097167.1 ENSMUST00000181819.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3298;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000053192.9 ENSMUST00000196025.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000053192.9 ENSMUST00000198087.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000053192.9 ENSMUST00000198948.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95229956_A/C chr3:95229956 C ENSMUSG00000053192.9 ENSMUST00000199917.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95841767_CACA/- chr3:95841767-95841770 - ENSMUSG00000015748.13 ENSMUST00000015892.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95841767_CACA/- chr3:95841767-95841770 - ENSMUSG00000015748.13 ENSMUST00000160155.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95841767_CACA/- chr3:95841767-95841770 - ENSMUSG00000015748.13 ENSMUST00000161420.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2035;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95841767_CACA/- chr3:95841767-95841770 - ENSMUSG00000015748.13 ENSMUST00000161476.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95841767_CACA/- chr3:95841767-95841770 - ENSMUSG00000015748.13 ENSMUST00000161482.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000015893.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000165307.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000167876.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000168106.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000169426.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000170125.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000170213.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000171035.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000015749.12 ENSMUST00000171368.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95935823_G/- chr3:95935823 - ENSMUSG00000106262.1 ENSMUST00000196705.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4263;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95951907_TG/CA chr3:95951907-95951908 CA ENSMUSG00000015749.12 ENSMUST00000165307.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_95951907_TG/CA chr3:95951907-95951908 CA ENSMUSG00000015749.12 ENSMUST00000168106.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4638;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96180449_-/ATGT chr3:96180448-96180449 ATGT ENSMUSG00000038486.9 ENSMUST00000035371.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=702;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96180449_-/ATGT chr3:96180448-96180449 ATGT ENSMUSG00000068856.3 ENSMUST00000076372.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2884;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96180449_-/ATGT chr3:96180448-96180449 ATGT ENSMUSG00000084686.1 ENSMUST00000122737.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3961;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96194870_A/G chr3:96194870 G ENSMUSG00000015943.11 ENSMUST00000016087.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1718;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96194870_A/G chr3:96194870 G ENSMUSG00000038486.9 ENSMUST00000035371.8 Transcript 3_prime_UTR_variant 3683 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96194870_A/G chr3:96194870 G ENSMUSG00000015943.11 ENSMUST00000107099.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1718;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96194870_A/G chr3:96194870 G ENSMUSG00000015943.11 ENSMUST00000177442.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1993;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96194870_A/G chr3:96194870 G ENSMUSG00000038486.9 ENSMUST00000196912.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96583506_CACACA/- chr3:96583506-96583511 - ENSMUSG00000028104.14 ENSMUST00000091924.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96583506_CACACA/- chr3:96583506-96583511 - ENSMUSG00000028104.14 ENSMUST00000131641.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96583506_CACACA/- chr3:96583506-96583511 - ENSMUSG00000028104.14 ENSMUST00000141579.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3351;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96583506_CACACA/- chr3:96583506-96583511 - ENSMUSG00000028104.14 ENSMUST00000145001.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96583506_CACACA/- chr3:96583506-96583511 - ENSMUSG00000087610.1 ENSMUST00000148290.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2843;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96840721_A/G chr3:96840721 G ENSMUSG00000038298.14 ENSMUST00000058865.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96840721_A/G chr3:96840721 G ENSMUSG00000038298.14 ENSMUST00000107069.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96840721_A/G chr3:96840721 G ENSMUSG00000038298.14 ENSMUST00000107070.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96840721_A/G chr3:96840721 G ENSMUSG00000038298.14 ENSMUST00000128789.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96840721_A/G chr3:96840721 G ENSMUSG00000038298.14 ENSMUST00000135031.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96840721_A/G chr3:96840721 G ENSMUSG00000038298.14 ENSMUST00000138014.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_96840721_A/G chr3:96840721 G ENSMUSG00000038298.14 ENSMUST00000153256.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 - ENSMUSG00000028093.15 ENSMUST00000090759.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1341;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 TC ENSMUSG00000028093.15 ENSMUST00000090759.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1341;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 - ENSMUSG00000028093.15 ENSMUST00000126438.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1667;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 TC ENSMUSG00000028093.15 ENSMUST00000126438.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1667;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 - ENSMUSG00000028093.15 ENSMUST00000133965.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1667;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 TC ENSMUSG00000028093.15 ENSMUST00000133965.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1667;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 - ENSMUSG00000028093.15 ENSMUST00000199346.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1660;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_97157433_TCTC/-/TC chr3:97157433-97157436 TC ENSMUSG00000028093.15 ENSMUST00000199346.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1660;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_98008324_TTT/- chr3:98008324-98008326 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_99277792_T/- chr3:99277792 - ENSMUSG00000027868.11 ENSMUST00000029462.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_99277792_T/- chr3:99277792 - ENSMUSG00000027868.11 ENSMUST00000151606.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_99868676_AA/-/AAA chr3:99868676-99868677 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_99868676_AA/-/AAA chr3:99868676-99868677 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_100003839_ACAC/- chr3:100003839-100003842 - ENSMUSG00000080754.1 ENSMUST00000119462.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4518;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100003839_ACAC/- chr3:100003839-100003842 - ENSMUSG00000027867.10 ENSMUST00000164539.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100425455_G/A chr3:100425455 A ENSMUSG00000086923.1 ENSMUST00000147951.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=950;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100425455_G/A chr3:100425455 A ENSMUSG00000086923.1 ENSMUST00000152827.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=984;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100500484_G/A chr3:100500484 A ENSMUSG00000053957.5 ENSMUST00000122898.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100500484_G/A chr3:100500484 A ENSMUSG00000104943.1 ENSMUST00000199168.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=359;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100545681_TT/-/T chr3:100545681-100545682 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_100545681_TT/-/T chr3:100545681-100545682 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_100550619_-/TCTA chr3:100550618-100550619 TCTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_100665230_G/A chr3:100665230 A ENSMUSG00000008763.16 ENSMUST00000008907.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100665230_G/A chr3:100665230 A ENSMUSG00000008763.16 ENSMUST00000123442.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100665230_G/A chr3:100665230 A ENSMUSG00000008763.16 ENSMUST00000130066.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_100665230_G/A chr3:100665230 A ENSMUSG00000008763.16 ENSMUST00000196250.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_101539994_TGTG/- chr3:101539994-101539997 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_101959132_TTT/-/TT chr3:101959132-101959134 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_101959132_TTT/-/TT chr3:101959132-101959134 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_101965204_CACA/- chr3:101965204-101965207 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_102207746_TGTG/- chr3:102207746-102207749 - ENSMUSG00000027860.15 ENSMUST00000029453.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3053;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_102207746_TGTG/- chr3:102207746-102207749 - ENSMUSG00000027860.15 ENSMUST00000159388.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_102207746_TGTG/- chr3:102207746-102207749 - ENSMUSG00000089916.1 ENSMUST00000160105.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1480;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_102207746_TGTG/- chr3:102207746-102207749 - ENSMUSG00000027860.15 ENSMUST00000161722.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3865;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_102207746_TGTG/- chr3:102207746-102207749 - ENSMUSG00000027860.15 ENSMUST00000168312.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_102246643_-/TTTC chr3:102246642-102246643 TTTC ENSMUSG00000105151.1 ENSMUST00000198375.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3026;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103275402_-/ATCT chr3:103275401-103275402 ATCT ENSMUSG00000033014.12 ENSMUST00000029444.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3891;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103275402_-/ATCT chr3:103275401-103275402 ATCT ENSMUSG00000033014.12 ENSMUST00000106860.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4477;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103329506_CC/- chr3:103329506-103329507 - ENSMUSG00000033014.12 ENSMUST00000029444.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103329506_CC/- chr3:103329506-103329507 - ENSMUSG00000033014.12 ENSMUST00000106860.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103329506_CC/- chr3:103329506-103329507 - ENSMUSG00000033014.12 ENSMUST00000196678.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3078;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103329506_CC/- chr3:103329506-103329507 - ENSMUSG00000033014.12 ENSMUST00000197779.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=347;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103329506_CC/- chr3:103329506-103329507 - ENSMUSG00000033014.12 ENSMUST00000198706.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103329506_CC/- chr3:103329506-103329507 - ENSMUSG00000104925.1 ENSMUST00000198850.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2636;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103329506_CC/- chr3:103329506-103329507 - ENSMUSG00000033014.12 ENSMUST00000198969.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2069;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 - ENSMUSG00000033014.12 ENSMUST00000029444.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 TTT ENSMUSG00000033014.12 ENSMUST00000029444.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 - ENSMUSG00000033014.12 ENSMUST00000106860.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 TTT ENSMUSG00000033014.12 ENSMUST00000106860.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 - ENSMUSG00000033014.12 ENSMUST00000197779.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2989;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 TTT ENSMUSG00000033014.12 ENSMUST00000197779.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2989;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 - ENSMUSG00000033014.12 ENSMUST00000198706.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 TTT ENSMUSG00000033014.12 ENSMUST00000198706.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 - ENSMUSG00000104925.1 ENSMUST00000198850.1 Transcript non_coding_transcript_exon_variant 6-9 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 TTT ENSMUSG00000104925.1 ENSMUST00000198850.1 Transcript non_coding_transcript_exon_variant 6-9 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 - ENSMUSG00000033014.12 ENSMUST00000198969.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4711;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103332148_TTTT/-/TTT chr3:103332148-103332151 TTT ENSMUSG00000033014.12 ENSMUST00000198969.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4711;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103368492_TTTT/- chr3:103368492-103368495 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_103840480_C/T chr3:103840480 T ENSMUSG00000044165.12 ENSMUST00000062945.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1832;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103840480_C/T chr3:103840480 T ENSMUSG00000044165.12 ENSMUST00000106822.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_103840480_C/T chr3:103840480 T ENSMUSG00000105053.1 ENSMUST00000199710.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1832;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104042029_G/A chr3:104042029 A ENSMUSG00000052539.15 ENSMUST00000064371.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104042029_G/A chr3:104042029 A ENSMUSG00000052539.15 ENSMUST00000121198.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104042029_G/A chr3:104042029 A ENSMUSG00000052539.15 ENSMUST00000122303.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104502252_C/A chr3:104502252 A ENSMUSG00000032913.13 ENSMUST00000046316.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104502252_C/A chr3:104502252 A ENSMUSG00000032913.13 ENSMUST00000196518.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104502252_C/A chr3:104502252 A ENSMUSG00000032913.13 ENSMUST00000198089.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104502252_C/A chr3:104502252 A ENSMUSG00000032913.13 ENSMUST00000198332.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104502252_C/A chr3:104502252 A ENSMUSG00000032913.13 ENSMUST00000199070.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_104502252_C/A chr3:104502252 A ENSMUSG00000104973.1 ENSMUST00000199690.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=645;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105220968_TTT/-/TT chr3:105220968-105220970 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_105220968_TTT/-/TT chr3:105220968-105220970 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_105422640_T/A chr3:105422640 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_105474591_C/T chr3:105474591 T ENSMUSG00000040896.16 ENSMUST00000079169.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105474591_C/T chr3:105474591 T ENSMUSG00000040896.16 ENSMUST00000098761.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105474591_C/T chr3:105474591 T ENSMUSG00000040896.16 ENSMUST00000118360.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105474591_C/T chr3:105474591 T ENSMUSG00000040896.16 ENSMUST00000141694.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105488261_-/GATA chr3:105488260-105488261 GATA ENSMUSG00000040896.16 ENSMUST00000079169.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105488261_-/GATA chr3:105488260-105488261 GATA ENSMUSG00000040896.16 ENSMUST00000098761.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105488261_-/GATA chr3:105488260-105488261 GATA ENSMUSG00000040896.16 ENSMUST00000118360.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105488261_-/GATA chr3:105488260-105488261 GATA ENSMUSG00000040896.16 ENSMUST00000141694.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 T ENSMUSG00000068798.10 ENSMUST00000090678.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 AA ENSMUSG00000068798.10 ENSMUST00000090678.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 TAA ENSMUSG00000068798.10 ENSMUST00000090678.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 T ENSMUSG00000068798.10 ENSMUST00000197094.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 AA ENSMUSG00000068798.10 ENSMUST00000197094.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 TAA ENSMUSG00000068798.10 ENSMUST00000197094.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 T ENSMUSG00000104910.1 ENSMUST00000197991.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 AA ENSMUSG00000104910.1 ENSMUST00000197991.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 TAA ENSMUSG00000104910.1 ENSMUST00000197991.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 T ENSMUSG00000068798.10 ENSMUST00000198004.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 AA ENSMUSG00000068798.10 ENSMUST00000198004.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 TAA ENSMUSG00000068798.10 ENSMUST00000198004.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 T ENSMUSG00000106341.1 ENSMUST00000199706.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=832;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 AA ENSMUSG00000106341.1 ENSMUST00000199706.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=832;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_105785859_TA/T/AA/TAA chr3:105785859-105785860 TAA ENSMUSG00000106341.1 ENSMUST00000199706.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=832;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_106912036_-/ATAG chr3:106912035-106912036 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_107087153_TGTG/- chr3:107087153-107087156 - ENSMUSG00000050179.3 ENSMUST00000060946.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3724;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107087153_TGTG/- chr3:107087153-107087156 - ENSMUSG00000050179.3 ENSMUST00000182132.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3726;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107087153_TGTG/- chr3:107087153-107087156 - ENSMUSG00000098108.7 ENSMUST00000182400.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107087153_TGTG/- chr3:107087153-107087156 - ENSMUSG00000098108.7 ENSMUST00000182414.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107117238_A/G chr3:107117238 G ENSMUSG00000040724.5 ENSMUST00000038695.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2233;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107542133_TGTG/-/TG chr3:107542133-107542136 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_107542133_TGTG/-/TG chr3:107542133-107542136 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000004035.12 ENSMUST00000004137.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2875;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000068762.11 ENSMUST00000106683.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4267;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000068762.11 ENSMUST00000106684.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4153;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000068762.11 ENSMUST00000106685.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4152;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000004035.12 ENSMUST00000106687.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3025;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000004035.12 ENSMUST00000106688.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3078;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000004035.12 ENSMUST00000124215.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3082;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000004035.12 ENSMUST00000133947.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3113;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_107934692_TGTG/- chr3:107934692-107934695 - ENSMUSG00000068762.11 ENSMUST00000155926.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4411;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_108333305_G/T chr3:108333305 T ENSMUSG00000068747.14 ENSMUST00000102632.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_108333305_G/T chr3:108333305 T ENSMUSG00000068747.14 ENSMUST00000135636.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_108615563_-/GAGA chr3:108615562-108615563 GAGA ENSMUSG00000040389.15 ENSMUST00000051145.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_108615563_-/GAGA chr3:108615562-108615563 GAGA ENSMUSG00000040389.15 ENSMUST00000123568.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3290;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_108615563_-/GAGA chr3:108615562-108615563 GAGA ENSMUSG00000040389.15 ENSMUST00000124731.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_108615563_-/GAGA chr3:108615562-108615563 GAGA ENSMUSG00000040389.15 ENSMUST00000133453.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3671;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_108615563_-/GAGA chr3:108615562-108615563 GAGA ENSMUSG00000040389.15 ENSMUST00000139626.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=602;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_109039277_T/G chr3:109039277 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_109715924_AA/-/A chr3:109715924-109715925 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_109715924_AA/-/A chr3:109715924-109715925 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000072596.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000106570.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000106571.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000106575.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000128219.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000131027.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000133268.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000138344.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000138953.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000156177.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012505_C/T chr3:110012505 T ENSMUSG00000059857.15 ENSMUST00000189335.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000072596.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000106570.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000106571.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000106575.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000128219.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000131027.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000133268.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000138344.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000138953.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000156177.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110012512_C/T chr3:110012512 T ENSMUSG00000059857.15 ENSMUST00000189335.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_110175184_ACAC/- chr3:110175184-110175187 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_110295177_T/A chr3:110295177 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_110501881_-/ATCT chr3:110501880-110501881 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_111125261_G/A chr3:111125261 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_111636961_-/TATATG chr3:111636960-111636961 TATATG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_112571378_G/T chr3:112571378 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_113220711_AA/-/A chr3:113220711-113220712 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_113220711_AA/-/A chr3:113220711-113220712 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_114344428_CA/- chr3:114344428-114344429 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_116004400_GTGT/- chr3:116004400-116004403 - ENSMUSG00000027963.14 ENSMUST00000029575.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3059;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116004400_GTGT/- chr3:116004400-116004403 - ENSMUSG00000054414.4 ENSMUST00000067485.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116004400_GTGT/- chr3:116004400-116004403 - ENSMUSG00000027963.14 ENSMUST00000106501.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3075;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116004400_GTGT/- chr3:116004400-116004403 - ENSMUSG00000027963.14 ENSMUST00000106502.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3817;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116004400_GTGT/- chr3:116004400-116004403 - ENSMUSG00000027963.14 ENSMUST00000128228.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3082;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116004400_GTGT/- chr3:116004400-116004403 - ENSMUSG00000027963.14 ENSMUST00000145945.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3120;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116004400_GTGT/- chr3:116004400-116004403 - ENSMUSG00000027963.14 ENSMUST00000149920.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3425;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116190326_-/AAAT chr3:116190325-116190326 AAAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_116856661_-/AGTA chr3:116856660-116856661 AGTA ENSMUSG00000033386.10 ENSMUST00000040260.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2803;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_116856661_-/AGTA chr3:116856660-116856661 AGTA ENSMUSG00000033386.10 ENSMUST00000199626.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2906;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_117285648_-/GACTCGA chr3:117285647-117285648 GACTCGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_117285665_T/A chr3:117285665 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_117458776_-/TATC chr3:117458775-117458776 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_117760622_-/ATAG chr3:117760621-117760622 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_118245137_G/A chr3:118245137 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_118491980_A/C chr3:118491980 C ENSMUSG00000097311.7 ENSMUST00000180593.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118491980_A/C chr3:118491980 C ENSMUSG00000097311.7 ENSMUST00000181310.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118491980_A/C chr3:118491980 C ENSMUSG00000097311.7 ENSMUST00000181926.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118491987_ATCG/- chr3:118491987-118491990 - ENSMUSG00000097311.7 ENSMUST00000180593.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118491987_ATCG/- chr3:118491987-118491990 - ENSMUSG00000097311.7 ENSMUST00000181310.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118491987_ATCG/- chr3:118491987-118491990 - ENSMUSG00000097311.7 ENSMUST00000181926.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118539603_CACA/- chr3:118539603-118539606 - ENSMUSG00000104362.1 ENSMUST00000193265.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4590;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118539603_CACA/- chr3:118539603-118539606 - ENSMUSG00000102729.1 ENSMUST00000195147.1 Transcript non_coding_transcript_exon_variant 2583-2586 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118871675_ACAC/- chr3:118871675-118871678 - ENSMUSG00000033308.16 ENSMUST00000039177.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118871675_ACAC/- chr3:118871675-118871678 - ENSMUSG00000033308.16 ENSMUST00000129148.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_118871675_ACAC/- chr3:118871675-118871678 - ENSMUSG00000106542.1 ENSMUST00000197510.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1198;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_119080195_GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGG/- chr3:119080195-119080244 - ENSMUSG00000033308.16 ENSMUST00000039177.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_119258656_-/TAT chr3:119258655-119258656 TAT ENSMUSG00000033308.16 ENSMUST00000039177.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_119478603_GATA/- chr3:119478603-119478606 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_119519423_-/AGA chr3:119519422-119519423 AGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_119907592_TATC/- chr3:119907592-119907595 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_120233036_-/TTTCT chr3:120233035-120233036 TTTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_120555495_-/AGAT chr3:120555494-120555495 AGAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_120905764_AA/-/AAA chr3:120905764-120905765 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_120905764_AA/-/AAA chr3:120905764-120905765 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_121007643_AGAG/- chr3:121007643-121007646 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_123603817_CCC/- chr3:123603817-123603819 - ENSMUSG00000027977.15 ENSMUST00000029602.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_123603817_CCC/- chr3:123603817-123603819 - ENSMUSG00000027977.15 ENSMUST00000124803.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_123603817_CCC/- chr3:123603817-123603819 - ENSMUSG00000027977.15 ENSMUST00000132112.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_123603817_CCC/- chr3:123603817-123603819 - ENSMUSG00000027977.15 ENSMUST00000137404.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_123603817_CCC/- chr3:123603817-123603819 - ENSMUSG00000027977.15 ENSMUST00000154668.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_123603817_CCC/- chr3:123603817-123603819 - ENSMUSG00000027977.15 ENSMUST00000172537.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_123603817_CCC/- chr3:123603817-123603819 - ENSMUSG00000027977.15 ENSMUST00000199046.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_124817835_-/AAAAAAAAAAAAAA chr3:124817834-124817835 AAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_125140987_AA/- chr3:125140987-125140988 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_125278888_C/T chr3:125278888 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_125671275_-/TG chr3:125671274-125671275 TG ENSMUSG00000027971.16 ENSMUST00000147016.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_125671275_-/TG chr3:125671274-125671275 TG ENSMUSG00000027971.16 ENSMUST00000173932.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_125799266_T/A chr3:125799266 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_126068311_-/AGAA chr3:126068310-126068311 AGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_126165609_-/CTAT chr3:126165608-126165609 CTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182008.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182008.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182050.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182050.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182064.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182064.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182078.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182078.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182452.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182452.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182547.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182547.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182610.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182610.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182711.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182711.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182959.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182959.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000182994.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000182994.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 - ENSMUSG00000032826.17 ENSMUST00000183095.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127147907_ACAC/-/AC chr3:127147907-127147910 AC ENSMUSG00000032826.17 ENSMUST00000183095.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127445718_-/AATA chr3:127445717-127445718 AATA ENSMUSG00000032826.17 ENSMUST00000182316.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127445718_-/AATA chr3:127445717-127445718 AATA ENSMUSG00000032826.17 ENSMUST00000182711.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127593494_TTT/- chr3:127593494-127593496 - ENSMUSG00000051278.12 ENSMUST00000043108.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127593494_TTT/- chr3:127593494-127593496 - ENSMUSG00000051278.12 ENSMUST00000196141.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127593494_TTT/- chr3:127593494-127593496 - ENSMUSG00000051278.12 ENSMUST00000196341.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127593494_TTT/- chr3:127593494-127593496 - ENSMUSG00000051278.12 ENSMUST00000197108.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=734;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127593494_TTT/- chr3:127593494-127593496 - ENSMUSG00000051278.12 ENSMUST00000199888.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127593494_TTT/- chr3:127593494-127593496 - ENSMUSG00000051278.12 ENSMUST00000200490.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_127660013_ACAC/- chr3:127660013-127660016 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_128021255_TCTA/- chr3:128021255-128021258 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_128138066_T/C chr3:128138066 C ENSMUSG00000105816.4 ENSMUST00000196895.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_128138066_T/C chr3:128138066 C ENSMUSG00000105816.4 ENSMUST00000197413.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_128138066_T/C chr3:128138066 C ENSMUSG00000105816.4 ENSMUST00000198478.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4706;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129061049_TGTG/- chr3:129061049-129061052 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_129248473_TT/- chr3:129248473-129248474 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_129594359_GTGT/-/GT chr3:129594359-129594362 - ENSMUSG00000041220.10 ENSMUST00000071402.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 GT ENSMUSG00000041220.10 ENSMUST00000071402.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 - ENSMUSG00000041220.10 ENSMUST00000197070.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 GT ENSMUSG00000041220.10 ENSMUST00000197070.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 - ENSMUSG00000041220.10 ENSMUST00000197235.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 GT ENSMUSG00000041220.10 ENSMUST00000197235.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 - ENSMUSG00000041220.10 ENSMUST00000198369.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 GT ENSMUSG00000041220.10 ENSMUST00000198369.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 - ENSMUSG00000041220.10 ENSMUST00000199910.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129594359_GTGT/-/GT chr3:129594359-129594362 GT ENSMUSG00000041220.10 ENSMUST00000199910.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129643174_GAGAGA/- chr3:129643174-129643179 - ENSMUSG00000041220.10 ENSMUST00000071402.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4679;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129728169_AA/- chr3:129728169-129728170 - ENSMUSG00000028017.7 ENSMUST00000029653.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129728169_AA/- chr3:129728169-129728170 - ENSMUSG00000028017.7 ENSMUST00000197079.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3082;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129728169_AA/- chr3:129728169-129728170 - ENSMUSG00000028017.7 ENSMUST00000197713.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3083;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129728169_AA/- chr3:129728169-129728170 - ENSMUSG00000106120.1 ENSMUST00000198992.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=675;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129728169_AA/- chr3:129728169-129728170 - ENSMUSG00000028017.7 ENSMUST00000199615.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3092;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129907695_T/C chr3:129907695 C ENSMUSG00000027997.9 ENSMUST00000029626.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129907695_T/C chr3:129907695 C ENSMUSG00000027997.9 ENSMUST00000137314.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129907695_T/C chr3:129907695 C ENSMUSG00000027997.9 ENSMUST00000152622.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2767;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_129907695_T/C chr3:129907695 C ENSMUSG00000027997.9 ENSMUST00000197175.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2281;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_131284956_-/AATA chr3:131284955-131284956 AATA ENSMUSG00000027983.13 ENSMUST00000106337.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_131284956_-/AATA chr3:131284955-131284956 AATA ENSMUSG00000106268.1 ENSMUST00000198141.1 Transcript non_coding_transcript_exon_variant 189-190 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_132040749_CTTC/- chr3:132040749-132040752 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_132125083_GAGA/-/GA chr3:132125083-132125086 - ENSMUSG00000028031.6 ENSMUST00000029665.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_132125083_GAGA/-/GA chr3:132125083-132125086 GA ENSMUSG00000028031.6 ENSMUST00000029665.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_132288100_-/TATGTATA chr3:132288099-132288100 TATGTATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_132332922_-/TATC chr3:132332921-132332922 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_133012951_TGTG/-/TG chr3:133012951-133012954 - ENSMUSG00000028018.15 ENSMUST00000029651.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133012951_TGTG/-/TG chr3:133012951-133012954 TG ENSMUSG00000028018.15 ENSMUST00000029651.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133012951_TGTG/-/TG chr3:133012951-133012954 - ENSMUSG00000028018.15 ENSMUST00000080583.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133012951_TGTG/-/TG chr3:133012951-133012954 TG ENSMUSG00000028018.15 ENSMUST00000080583.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133012951_TGTG/-/TG chr3:133012951-133012954 - ENSMUSG00000028018.15 ENSMUST00000161577.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133012951_TGTG/-/TG chr3:133012951-133012954 TG ENSMUSG00000028018.15 ENSMUST00000161577.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133151145_TT/- chr3:133151145-133151146 - ENSMUSG00000040969.14 ENSMUST00000147041.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133633282_-/TTTC chr3:133633281-133633282 TTTC ENSMUSG00000102530.1 ENSMUST00000193574.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133962980_-/TTTA chr3:133962979-133962980 TTTA ENSMUSG00000097911.2 ENSMUST00000181952.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_133962980_-/TTTA chr3:133962979-133962980 TTTA ENSMUSG00000097911.2 ENSMUST00000200444.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_134326329_C/G chr3:134326329 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_134344185_TTT/-/TTTTTTTTTTTTTTTTTTT chr3:134344185-134344187 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_134344185_TTT/-/TTTTTTTTTTTTTTTTTTT chr3:134344185-134344187 TTTTTTTTTTTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_134403835_ATATAT/- chr3:134403835-134403840 - ENSMUSG00000105765.1 ENSMUST00000198231.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_134497454_CTCT/- chr3:134497454-134497457 - ENSMUSG00000097031.2 ENSMUST00000180764.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_134868579_C/T chr3:134868579 T ENSMUSG00000028172.5 ENSMUST00000029822.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_135914572_AG/- chr3:135914572-135914573 - ENSMUSG00000104710.1 ENSMUST00000197498.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_137546671_TGTG/- chr3:137546671-137546674 - ENSMUSG00000055138.10 ENSMUST00000198629.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3371;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_137969640_-/A chr3:137969639-137969640 A ENSMUSG00000028159.14 ENSMUST00000029806.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_137969640_-/A chr3:137969639-137969640 A ENSMUSG00000028159.14 ENSMUST00000136613.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_137969640_-/A chr3:137969639-137969640 A ENSMUSG00000028159.14 ENSMUST00000154716.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_139108943_AA/- chr3:139108943-139108944 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_139461728_TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC/- chr3:139461728-139461783 - ENSMUSG00000047940.13 ENSMUST00000062306.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_139461728_TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC/- chr3:139461728-139461783 - ENSMUSG00000047940.13 ENSMUST00000106239.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_139839575_TATA/- chr3:139839575-139839578 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_140401845_G/T chr3:140401845 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_141089239_TT/- chr3:141089239-141089240 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_141315741_AGAG/-/AG chr3:141315741-141315744 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_141315741_AGAG/-/AG chr3:141315741-141315744 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_141402559_AAA/- chr3:141402559-141402561 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000059921.15 ENSMUST00000075282.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000059921.15 ENSMUST00000106236.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000059921.15 ENSMUST00000130636.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000059921.15 ENSMUST00000142762.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000059921.15 ENSMUST00000151007.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000059921.15 ENSMUST00000155416.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000089737.1 ENSMUST00000161394.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_141466873_-/ACAC chr3:141466872-141466873 ACAC ENSMUSG00000059921.15 ENSMUST00000200114.1 Transcript non_coding_transcript_exon_variant 1274-1275 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_142095839_G/T chr3:142095839 T ENSMUSG00000052430.15 ENSMUST00000098568.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_142095839_G/T chr3:142095839 T ENSMUSG00000052430.15 ENSMUST00000106230.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_142153162_CACA/- chr3:142153162-142153165 - ENSMUSG00000052430.15 ENSMUST00000098568.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_142153162_CACA/- chr3:142153162-142153165 - ENSMUSG00000052430.15 ENSMUST00000106230.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_143177475_G/A chr3:143177475 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_143225287_TGTG/- chr3:143225287-143225290 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_143391703_TCTTCT/- chr3:143391703-143391708 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_143564530_TGTG/- chr3:143564530-143564533 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_143687847_TT/-/T chr3:143687847-143687848 - ENSMUSG00000105279.1 ENSMUST00000197170.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_143687847_TT/-/T chr3:143687847-143687848 T ENSMUSG00000105279.1 ENSMUST00000197170.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_144143641_TGTG/-/TG chr3:144143641-144143644 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_144143641_TGTG/-/TG chr3:144143641-144143644 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_144249707_A/C chr3:144249707 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_144341609_CACA/- chr3:144341609-144341612 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_144629845_CACA/- chr3:144629845-144629848 - ENSMUSG00000105045.1 ENSMUST00000198343.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3881;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_144721237_ACA/- chr3:144721237-144721239 - ENSMUSG00000037062.13 ENSMUST00000163279.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=902;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_144721237_ACA/- chr3:144721237-144721239 - ENSMUSG00000037062.13 ENSMUST00000198254.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=914;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_144721237_ACA/- chr3:144721237-144721239 - ENSMUSG00000037062.13 ENSMUST00000199531.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1127;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_144721237_ACA/- chr3:144721237-144721239 - ENSMUSG00000037062.13 ENSMUST00000199854.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1032;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_145286327_GTGT/- chr3:145286327-145286330 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_145463768_TGTGTG/- chr3:145463768-145463773 - ENSMUSG00000028197.4 ENSMUST00000029848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_145863155_A/C chr3:145863155 C ENSMUSG00000028194.15 ENSMUST00000029845.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_145863155_A/C chr3:145863155 C ENSMUSG00000028194.15 ENSMUST00000120310.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_145863155_A/C chr3:145863155 C ENSMUSG00000028194.15 ENSMUST00000127193.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_145863162_GTGG/- chr3:145863162-145863165 - ENSMUSG00000028194.15 ENSMUST00000029845.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_145863162_GTGG/- chr3:145863162-145863165 - ENSMUSG00000028194.15 ENSMUST00000120310.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_145863162_GTGG/- chr3:145863162-145863165 - ENSMUSG00000028194.15 ENSMUST00000127193.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_146737252_C/T chr3:146737252 T ENSMUSG00000005034.15 ENSMUST00000005164.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_146737252_C/T chr3:146737252 T ENSMUSG00000005034.15 ENSMUST00000102515.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_146737252_C/T chr3:146737252 T ENSMUSG00000005034.15 ENSMUST00000106137.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_146737252_C/T chr3:146737252 T ENSMUSG00000005034.15 ENSMUST00000106138.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_146737252_C/T chr3:146737252 T ENSMUSG00000005034.15 ENSMUST00000144369.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_147434925_-/ATCT chr3:147434924-147434925 ATCT ENSMUSG00000102569.1 ENSMUST00000195873.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1635;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_148389999_GG/- chr3:148389999-148390000 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_148624807_ATAT/- chr3:148624807-148624810 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_149182969_GTGT/- chr3:149182969-149182972 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_149227008_T/- chr3:149227008 - ENSMUSG00000070342.3 ENSMUST00000093950.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1263;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_149227008_T/- chr3:149227008 - ENSMUSG00000070342.3 ENSMUST00000180599.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1263;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_149460411_TCTC/- chr3:149460411-149460414 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_149508417_T/A chr3:149508417 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_150463458_T/C chr3:150463458 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_152531611_AGAG/- chr3:152531611-152531614 - ENSMUSG00000039058.11 ENSMUST00000045262.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_152531611_AGAG/- chr3:152531611-152531614 - ENSMUSG00000039058.11 ENSMUST00000200062.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4859;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_152931986_CACA/- chr3:152931986-152931989 - ENSMUSG00000039037.5 ENSMUST00000044278.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_152931986_CACA/- chr3:152931986-152931989 - ENSMUSG00000039047.17 ENSMUST00000161596.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153531857_C/A chr3:153531857 A ENSMUSG00000052544.9 ENSMUST00000064460.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153531857_C/A chr3:153531857 A ENSMUSG00000052544.9 ENSMUST00000198775.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153531857_C/A chr3:153531857 A ENSMUSG00000052544.9 ENSMUST00000200397.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153531951_G/- chr3:153531951 - ENSMUSG00000052544.9 ENSMUST00000064460.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153531951_G/- chr3:153531951 - ENSMUSG00000052544.9 ENSMUST00000198775.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153531951_G/- chr3:153531951 - ENSMUSG00000052544.9 ENSMUST00000200397.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153632999_TGTG/- chr3:153632999-153633002 - ENSMUSG00000052544.9 ENSMUST00000064460.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153632999_TGTG/- chr3:153632999-153633002 - ENSMUSG00000052544.9 ENSMUST00000198775.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153632999_TGTG/- chr3:153632999-153633002 - ENSMUSG00000052544.9 ENSMUST00000200397.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_153796590_TGTG/- chr3:153796590-153796593 - ENSMUSG00000062046.1 ENSMUST00000081193.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4503;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_154213152_AA/-/AAA chr3:154213152-154213153 - ENSMUSG00000028360.9 ENSMUST00000089948.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_154213152_AA/-/AAA chr3:154213152-154213153 AAA ENSMUSG00000028360.9 ENSMUST00000089948.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_155456521_T/A chr3:155456521 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_156298168_-/AAT chr3:156298167-156298168 AAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_156667516_ATATAT/- chr3:156667516-156667521 - ENSMUSG00000040037.13 ENSMUST00000041425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_156667516_ATATAT/- chr3:156667516-156667521 - ENSMUSG00000040037.13 ENSMUST00000074015.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_156667516_ATATAT/- chr3:156667516-156667521 - ENSMUSG00000040037.13 ENSMUST00000106065.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_156667516_ATATAT/- chr3:156667516-156667521 - ENSMUSG00000040037.13 ENSMUST00000175773.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_156804146_C/T chr3:156804146 T ENSMUSG00000040037.13 ENSMUST00000041425.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_156804146_C/T chr3:156804146 T ENSMUSG00000040037.13 ENSMUST00000074015.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_156804146_C/T chr3:156804146 T ENSMUSG00000040037.13 ENSMUST00000106065.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_156804146_C/T chr3:156804146 T ENSMUSG00000040037.13 ENSMUST00000175773.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_157517451_GA/- chr3:157517451-157517452 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_157764337_TT/-/T chr3:157764337-157764338 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_157764337_TT/-/T chr3:157764337-157764338 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr3_157936602_C/T chr3:157936602 T ENSMUSG00000028177.13 ENSMUST00000196971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_157936602_C/T chr3:157936602 T ENSMUSG00000028177.13 ENSMUST00000198623.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr3_159705038_AA/- chr3:159705038-159705039 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_3177313_T/C chr4:3177313 C ENSMUSG00000115072.1 ENSMUST00000105160.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4310;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_3177313_T/C chr4:3177313 C ENSMUSG00000115072.1 ENSMUST00000226198.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4307;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_3300603_A/C chr4:3300603 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_3300627_G/A chr4:3300627 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_3973094_-/T chr4:3973093-3973094 T ENSMUSG00000068240.5 ENSMUST00000089430.5 Transcript 3_prime_UTR_variant 502-503 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_4237531_T/G chr4:4237531 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_4449367_T/- chr4:4449367 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_4640854_C/A chr4:4640854 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_4646203_AA/-/A chr4:4646203-4646204 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_4646203_AA/-/A chr4:4646203-4646204 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_4890004_A/G chr4:4890004 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000054857.12 Transcript 3_prime_UTR_variant 2057-2058 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000054857.12 Transcript 3_prime_UTR_variant 2057-2058 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000108380.1 Transcript 3_prime_UTR_variant 1966-1967 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000108380.1 Transcript 3_prime_UTR_variant 1966-1967 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000124256.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1566;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000124256.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1566;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000126564.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000126564.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000141479.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1454;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000141479.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1454;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000145365.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1417;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000145365.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1417;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000156582.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1103;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000156582.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1103;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 - ENSMUSG00000049119.14 ENSMUST00000171403.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_5799948_AA/-/AAA chr4:5799948-5799949 AAA ENSMUSG00000049119.14 ENSMUST00000171403.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_7247827_GAGA/-/GA chr4:7247827-7247830 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_7247827_GAGA/-/GA chr4:7247827-7247830 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_7279562_G/A chr4:7279562 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_7307735_-/GAGAGAGAGAGAGAGA chr4:7307734-7307735 GAGAGAGAGAGAGAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_8576510_TGTG/- chr4:8576510-8576513 - ENSMUSG00000047187.9 ENSMUST00000060232.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_8660627_A/G chr4:8660627 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_8660715_C/T chr4:8660715 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_9249722_CACA/-/CA/CACACA chr4:9249722-9249725 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_9249722_CACA/-/CA/CACACA chr4:9249722-9249725 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_9249722_CACA/-/CA/CACACA chr4:9249722-9249725 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_10533406_T/A chr4:10533406 A ENSMUSG00000086080.7 ENSMUST00000145856.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_10533406_T/A chr4:10533406 A ENSMUSG00000086080.7 ENSMUST00000146783.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_10836742_AA/-/AAA chr4:10836742-10836743 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_10836742_AA/-/AAA chr4:10836742-10836743 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_11129776_-/T chr4:11129775-11129776 T ENSMUSG00000083025.1 ENSMUST00000121003.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3551;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11129776_-/T chr4:11129775-11129776 T ENSMUSG00000086765.7 ENSMUST00000142297.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2777;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11129776_-/T chr4:11129775-11129776 T ENSMUSG00000086765.7 ENSMUST00000151138.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2777;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11129776_-/T chr4:11129775-11129776 T ENSMUSG00000105333.1 ENSMUST00000197598.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4321;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11586935_A/C chr4:11586935 C ENSMUSG00000078773.11 ENSMUST00000070755.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11586935_A/C chr4:11586935 C ENSMUSG00000078773.11 ENSMUST00000095145.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1191;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11586935_A/C chr4:11586935 C ENSMUSG00000078773.11 ENSMUST00000179498.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11586935_A/C chr4:11586935 C ENSMUSG00000078773.11 ENSMUST00000179731.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11586935_A/C chr4:11586935 C ENSMUSG00000094595.1 ENSMUST00000180239.1 Transcript 3_prime_UTR_variant 3702 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11987278_CTCT/- chr4:11987278-11987281 - ENSMUSG00000085614.1 ENSMUST00000146154.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11987278_CTCT/- chr4:11987278-11987281 - ENSMUSG00000085614.1 ENSMUST00000154194.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_11987278_CTCT/- chr4:11987278-11987281 - ENSMUSG00000097459.1 ENSMUST00000181295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_12498433_CTCT/- chr4:12498433-12498436 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_12851414_G/T chr4:12851414 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_13124998_C/G chr4:13124998 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_13902760_-/AAAT chr4:13902759-13902760 AAAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_13966269_C/T chr4:13966269 T ENSMUSG00000086927.1 ENSMUST00000130582.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_14354186_TCTC/-/TC/TCTCTC chr4:14354186-14354189 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_14354186_TCTC/-/TC/TCTCTC chr4:14354186-14354189 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_14354186_TCTC/-/TC/TCTCTC chr4:14354186-14354189 TCTCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_14396085_AGAG/- chr4:14396085-14396088 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_14543727_GGGAGGGAGGGAGGGAGGGAGGGAGG/- chr4:14543727-14543752 - ENSMUSG00000040569.13 ENSMUST00000042221.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_15263269_TGTG/-/TG chr4:15263269-15263272 - ENSMUSG00000043252.8 ENSMUST00000062684.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2559;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_15263269_TGTG/-/TG chr4:15263269-15263272 TG ENSMUSG00000043252.8 ENSMUST00000062684.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2559;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_16748178_G/A chr4:16748178 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_16748182_G/A chr4:16748182 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_16771515_ATAT/- chr4:16771515-16771518 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17019068_C/- chr4:17019068 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17062959_TGTG/-/TG chr4:17062959-17062962 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17062959_TGTG/-/TG chr4:17062959-17062962 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17234468_-/TCT chr4:17234467-17234468 TCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17571222_G/A chr4:17571222 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17618895_TT/- chr4:17618895-17618896 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17624800_CAA/C/AAA chr4:17624800-17624802 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17624800_CAA/C/AAA chr4:17624800-17624802 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_17642664_AGAG/- chr4:17642664-17642667 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_18684286_AA/-/A chr4:18684286-18684287 - ENSMUSG00000087402.1 ENSMUST00000133363.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_18684286_AA/-/A chr4:18684286-18684287 A ENSMUSG00000087402.1 ENSMUST00000133363.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_19663084_A/C chr4:19663084 C ENSMUSG00000041058.15 ENSMUST00000035982.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_19663084_A/C chr4:19663084 C ENSMUSG00000041058.15 ENSMUST00000108246.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_20175132_A/G chr4:20175132 G ENSMUSG00000055761.14 ENSMUST00000119374.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21482295_T/G chr4:21482295 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 - ENSMUSG00000040478.14 ENSMUST00000076206.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 CACACA ENSMUSG00000040478.14 ENSMUST00000076206.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 - ENSMUSG00000040478.14 ENSMUST00000095141.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 CACACA ENSMUSG00000040478.14 ENSMUST00000095141.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 - ENSMUSG00000040478.14 ENSMUST00000139255.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 CACACA ENSMUSG00000040478.14 ENSMUST00000139255.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 - ENSMUSG00000040478.14 ENSMUST00000139568.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 CACACA ENSMUSG00000040478.14 ENSMUST00000139568.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 - ENSMUSG00000040478.14 ENSMUST00000144160.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 CACACA ENSMUSG00000040478.14 ENSMUST00000144160.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 - ENSMUSG00000040478.14 ENSMUST00000149516.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_21684202_CACA/-/CACACA chr4:21684202-21684205 CACACA ENSMUSG00000040478.14 ENSMUST00000149516.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_22062462_CACA/-/CA chr4:22062462-22062465 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_22062462_CACA/-/CA chr4:22062462-22062465 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_22482749_-/TTTTT chr4:22482748-22482749 TTTTT ENSMUSG00000095139.2 ENSMUST00000178174.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=31;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_22511482_T/C chr4:22511482 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_23434297_CTCT/- chr4:23434297-23434300 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_23890481_TT/- chr4:23890481-23890482 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_25120328_CTCT/- chr4:25120328-25120331 - ENSMUSG00000085885.1 ENSMUST00000124792.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 - ENSMUSG00000040359.14 ENSMUST00000038705.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=482;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 TTATTATTA ENSMUSG00000040359.14 ENSMUST00000038705.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=482;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 - ENSMUSG00000040359.14 ENSMUST00000102994.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=424;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 TTATTATTA ENSMUSG00000040359.14 ENSMUST00000102994.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=424;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 - ENSMUSG00000040359.14 ENSMUST00000132558.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=497;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 TTATTATTA ENSMUSG00000040359.14 ENSMUST00000132558.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=497;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 - ENSMUSG00000040359.14 ENSMUST00000142949.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25282245_TTATTA/-/TTATTATTA chr4:25282245-25282250 TTATTATTA ENSMUSG00000040359.14 ENSMUST00000142949.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25692542_GAGA/- chr4:25692542-25692545 - ENSMUSG00000055373.8 ENSMUST00000084770.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25692542_GAGA/- chr4:25692542-25692545 - ENSMUSG00000055373.8 ENSMUST00000108199.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25711188_A/- chr4:25711188 - ENSMUSG00000055373.8 ENSMUST00000084770.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_25711188_A/- chr4:25711188 - ENSMUSG00000055373.8 ENSMUST00000108199.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_26207761_GAGA/- chr4:26207761-26207764 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_26273010_AAC/A/CAC chr4:26273010-26273012 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_26273010_AAC/A/CAC chr4:26273010-26273012 CAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_27888210_G/A chr4:27888210 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_28978595_AGAG/-/AG chr4:28978595-28978598 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_28978595_AGAG/-/AG chr4:28978595-28978598 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_29205064_TGTG/- chr4:29205064-29205067 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_29819336_ACAC/- chr4:29819336-29819339 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_30543796_ACAC/-/AC chr4:30543796-30543799 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_30543796_ACAC/-/AC chr4:30543796-30543799 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_30554741_-/AAAAAAAAAAAAAAA chr4:30554740-30554741 AAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_30873241_ACAC/- chr4:30873241-30873244 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_31359708_GT/TC chr4:31359708-31359709 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_31946855_GTGT/- chr4:31946855-31946858 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_31953822_-/GAAAGAAA chr4:31953821-31953822 GAAAGAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_32035890_C/T chr4:32035890 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_33141440_A/T chr4:33141440 T ENSMUSG00000028280.9 ENSMUST00000029947.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_33176670_G/A chr4:33176670 A ENSMUSG00000054659.13 ENSMUST00000098181.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_33176670_G/A chr4:33176670 A ENSMUSG00000054659.13 ENSMUST00000119167.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4950;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_33579688_ACACAC/-/ACAC chr4:33579688-33579693 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_33579688_ACACAC/-/ACAC chr4:33579688-33579693 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_34017585_G/A chr4:34017585 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_35141431_TT/- chr4:35141431-35141432 - ENSMUSG00000073910.10 ENSMUST00000102975.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_35141431_TT/- chr4:35141431-35141432 - ENSMUSG00000073910.10 ENSMUST00000155725.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_35542783_C/T chr4:35542783 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_36057721_-/TATC chr4:36057720-36057721 TATC ENSMUSG00000045083.14 ENSMUST00000098151.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36057721_-/TATC chr4:36057720-36057721 TATC ENSMUSG00000045083.14 ENSMUST00000108122.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36057721_-/TATC chr4:36057720-36057721 TATC ENSMUSG00000045083.14 ENSMUST00000108124.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=994;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36057721_-/TATC chr4:36057720-36057721 TATC ENSMUSG00000045083.14 ENSMUST00000124999.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36413545_A/C chr4:36413545 C ENSMUSG00000045083.14 ENSMUST00000108122.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36413545_A/C chr4:36413545 C ENSMUSG00000045083.14 ENSMUST00000124999.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36413547_T/C chr4:36413547 C ENSMUSG00000045083.14 ENSMUST00000108122.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36413547_T/C chr4:36413547 C ENSMUSG00000045083.14 ENSMUST00000124999.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36817381_G/A chr4:36817381 A ENSMUSG00000045083.14 ENSMUST00000108122.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36817381_G/A chr4:36817381 A ENSMUSG00000045083.14 ENSMUST00000124999.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36817381_G/A chr4:36817381 A ENSMUSG00000045083.14 ENSMUST00000127372.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36817381_G/A chr4:36817381 A ENSMUSG00000045083.14 ENSMUST00000144170.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36817381_G/A chr4:36817381 A ENSMUSG00000045083.14 ENSMUST00000145615.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_36963725_TT/- chr4:36963725-36963726 - ENSMUSG00000084898.1 ENSMUST00000144029.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_38275959_TGTG/-/TG chr4:38275959-38275962 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_38275959_TGTG/-/TG chr4:38275959-38275962 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_38360027_-/ATAT chr4:38360026-38360027 ATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_40336410_ACAC/- chr4:40336410-40336413 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_40685995_C/A chr4:40685995 A ENSMUSG00000028411.15 ENSMUST00000030119.9 Transcript 3_prime_UTR_variant 1637 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_40685995_C/A chr4:40685995 A ENSMUSG00000028411.15 ENSMUST00000068125.10 Transcript 3_prime_UTR_variant 1770 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_40685995_C/A chr4:40685995 A ENSMUSG00000028411.15 ENSMUST00000108103.8 Transcript 3_prime_UTR_variant 1320 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_40685995_C/A chr4:40685995 A ENSMUSG00000028411.15 ENSMUST00000129021.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=247;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_40842821_T/A chr4:40842821 A ENSMUSG00000028413.13 ENSMUST00000030121.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_40842821_T/A chr4:40842821 A ENSMUSG00000028413.13 ENSMUST00000108096.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_40842833_T/A chr4:40842833 A ENSMUSG00000028413.13 ENSMUST00000030121.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_40842833_T/A chr4:40842833 A ENSMUSG00000028413.13 ENSMUST00000108096.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41469744_TTTT/- chr4:41469744-41469747 - ENSMUSG00000028438.16 ENSMUST00000030148.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4896;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41469744_TTTT/- chr4:41469744-41469747 - ENSMUSG00000028443.6 ENSMUST00000030154.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41469744_TTTT/- chr4:41469744-41469747 - ENSMUSG00000028438.16 ENSMUST00000108055.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4904;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41469744_TTTT/- chr4:41469744-41469747 - ENSMUSG00000028438.16 ENSMUST00000131532.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4857;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41469744_TTTT/- chr4:41469744-41469747 - ENSMUSG00000028438.16 ENSMUST00000133497.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4898;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41469744_TTTT/- chr4:41469744-41469747 - ENSMUSG00000028438.16 ENSMUST00000154175.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4904;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41469744_TTTT/- chr4:41469744-41469747 - ENSMUSG00000028438.16 ENSMUST00000154535.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4898;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41585907_CC/-/C chr4:41585907-41585908 - ENSMUSG00000061322.15 ENSMUST00000102963.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_41585907_CC/-/C chr4:41585907-41585908 C ENSMUSG00000061322.15 ENSMUST00000102963.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028453.10 ENSMUST00000030165.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028453.10 ENSMUST00000030165.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028454.16 ENSMUST00000067481.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028454.16 ENSMUST00000067481.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028454.16 ENSMUST00000098109.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028454.16 ENSMUST00000098109.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028453.10 ENSMUST00000123332.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2257;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028453.10 ENSMUST00000123332.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2257;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028453.10 ENSMUST00000132273.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2239;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028453.10 ENSMUST00000132273.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2239;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028453.10 ENSMUST00000133915.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2523;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028453.10 ENSMUST00000133915.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2523;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028453.10 ENSMUST00000134083.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3592;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028453.10 ENSMUST00000134083.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3592;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028453.10 ENSMUST00000135362.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2575;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028453.10 ENSMUST00000135362.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2575;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 - ENSMUSG00000028454.16 ENSMUST00000149333.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43012745_AA/-/AAA chr4:43012745-43012746 AAA ENSMUSG00000028454.16 ENSMUST00000149333.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000079978.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000107952.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000107953.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000132310.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000163653.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000168032.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000207569.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43211358_A/T chr4:43211358 T ENSMUSG00000028456.18 ENSMUST00000207708.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43439556_TT/- chr4:43439556-43439557 - ENSMUSG00000028458.12 ENSMUST00000060864.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2382;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_43439556_TT/- chr4:43439556-43439557 - ENSMUSG00000028458.12 ENSMUST00000138981.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3764;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44484312_AGAGAG/-/AGAG chr4:44484312-44484317 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_44484312_AGAGAG/-/AGAG chr4:44484312-44484317 AGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000014174.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000102932.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000107825.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000107826.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000107827.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000134968.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000143235.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000165417.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000172866.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000172949.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000173733.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000173821.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000174242.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000174319.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_44627131_AGAAAGAAAGAA/- chr4:44627131-44627142 - ENSMUSG00000014030.15 ENSMUST00000194075.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45240945_ACAC/- chr4:45240945-45240948 - ENSMUSG00000035615.12 ENSMUST00000044773.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45240945_ACAC/- chr4:45240945-45240948 - ENSMUSG00000035615.12 ENSMUST00000107804.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45240945_ACAC/- chr4:45240945-45240948 - ENSMUSG00000035615.12 ENSMUST00000134280.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45240945_ACAC/- chr4:45240945-45240948 - ENSMUSG00000086284.1 ENSMUST00000134640.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45533421_A/- chr4:45533421 - ENSMUSG00000044813.15 ENSMUST00000061986.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3091;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45533421_A/- chr4:45533421 - ENSMUSG00000044813.15 ENSMUST00000147448.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=951;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45613936_AGAG/- chr4:45613936-45613939 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_45948115_CTCT/- chr4:45948115-45948118 - ENSMUSG00000035539.13 ENSMUST00000149903.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45948115_CTCT/- chr4:45948115-45948118 - ENSMUSG00000035539.13 ENSMUST00000178561.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_45959500_-/AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG chr4:45959499-45959500 AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_46029382_GTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATGTGTGTATGC/- chr4:46029382-46029427 - ENSMUSG00000035517.17 ENSMUST00000102929.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46029382_GTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATGTGTGTATGC/- chr4:46029382-46029427 - ENSMUSG00000035517.17 ENSMUST00000107777.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46029382_GTGTGTGTGTGTGCGTGTGTGTGTGTGTGTGTGTATGTGTGTATGC/- chr4:46029382-46029427 - ENSMUSG00000035517.17 ENSMUST00000155936.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46106328_CT/C/TT chr4:46106328-46106329 C ENSMUSG00000028328.13 ENSMUST00000107773.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46106328_CT/C/TT chr4:46106328-46106329 TT ENSMUSG00000028328.13 ENSMUST00000107773.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46106328_CT/C/TT chr4:46106328-46106329 C ENSMUSG00000028328.13 ENSMUST00000155730.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46106328_CT/C/TT chr4:46106328-46106329 TT ENSMUSG00000028328.13 ENSMUST00000155730.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46125294_A/- chr4:46125294 - ENSMUSG00000035495.15 ENSMUST00000107770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46125294_A/- chr4:46125294 - ENSMUSG00000035495.15 ENSMUST00000107772.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46125294_A/- chr4:46125294 - ENSMUSG00000035495.15 ENSMUST00000137399.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3672;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46125294_A/- chr4:46125294 - ENSMUSG00000035495.15 ENSMUST00000160008.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46405469_AA/-/AAA chr4:46405469-46405470 - ENSMUSG00000028332.13 ENSMUST00000071096.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46405469_AA/-/AAA chr4:46405469-46405470 AAA ENSMUSG00000028332.13 ENSMUST00000071096.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46405469_AA/-/AAA chr4:46405469-46405470 - ENSMUSG00000028332.13 ENSMUST00000107764.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1233;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46405469_AA/-/AAA chr4:46405469-46405470 AAA ENSMUSG00000028332.13 ENSMUST00000107764.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1233;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46577695_G/A chr4:46577695 A ENSMUSG00000028337.14 ENSMUST00000107756.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46577695_G/A chr4:46577695 A ENSMUSG00000028337.14 ENSMUST00000127304.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46577695_G/A chr4:46577695 A ENSMUSG00000028337.14 ENSMUST00000139179.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46577697_G/A chr4:46577697 A ENSMUSG00000028337.14 ENSMUST00000107756.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46577697_G/A chr4:46577697 A ENSMUSG00000028337.14 ENSMUST00000127304.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46577697_G/A chr4:46577697 A ENSMUSG00000028337.14 ENSMUST00000139179.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_46954509_CACA/- chr4:46954509-46954512 - ENSMUSG00000039809.10 ENSMUST00000107749.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_47107662_A/C chr4:47107662 C ENSMUSG00000039774.12 ENSMUST00000045041.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_47107662_A/C chr4:47107662 C ENSMUSG00000039774.12 ENSMUST00000107744.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_47741356_TGTG/- chr4:47741356-47741359 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_49014224_AA/-/A chr4:49014224-49014225 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_49014224_AA/-/A chr4:49014224-49014225 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_49151481_ACAC/- chr4:49151481-49151484 - ENSMUSG00000063446.4 ENSMUST00000076670.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_49151481_ACAC/- chr4:49151481-49151484 - ENSMUSG00000063446.4 ENSMUST00000137884.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_49151481_ACAC/- chr4:49151481-49151484 - ENSMUSG00000063446.4 ENSMUST00000151692.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_49901326_-/TG chr4:49901325-49901326 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_50482257_T/G chr4:50482257 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_50593433_CTCTCT/-/CTCT chr4:50593433-50593438 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_50593433_CTCTCT/-/CTCT chr4:50593433-50593438 CTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_50733056_C/A chr4:50733056 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_51018615_G/T chr4:51018615 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_51018629_C/G chr4:51018629 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_52004706_TGTG/-/TG chr4:52004706-52004709 - ENSMUSG00000085515.1 ENSMUST00000141452.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_52004706_TGTG/-/TG chr4:52004706-52004709 TG ENSMUSG00000085515.1 ENSMUST00000141452.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_52660733_T/A chr4:52660733 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_52749750_-/TCTT chr4:52749749-52749750 TCTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_53827930_CCC/- chr4:53827930-53827932 - ENSMUSG00000028420.13 ENSMUST00000030127.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_53827930_CCC/- chr4:53827930-53827932 - ENSMUSG00000028420.13 ENSMUST00000150803.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_53827930_CCC/- chr4:53827930-53827932 - ENSMUSG00000028420.13 ENSMUST00000151206.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_54447708_T/G chr4:54447708 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_54478214_A/- chr4:54478214 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_54999467_AA/-/A chr4:54999467-54999468 - ENSMUSG00000060206.11 ENSMUST00000098070.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_54999467_AA/-/A chr4:54999467-54999468 A ENSMUSG00000060206.11 ENSMUST00000098070.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_54999467_AA/-/A chr4:54999467-54999468 - ENSMUSG00000060206.11 ENSMUST00000133895.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_54999467_AA/-/A chr4:54999467-54999468 A ENSMUSG00000060206.11 ENSMUST00000133895.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_55165013_TTTA/- chr4:55165013-55165016 - ENSMUSG00000081177.1 ENSMUST00000118033.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1397;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_55165013_TTTA/- chr4:55165013-55165016 - ENSMUSG00000087614.1 ENSMUST00000150455.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_55263197_AA/- chr4:55263197-55263198 - ENSMUSG00000087614.1 ENSMUST00000150455.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_55492067_AATA/- chr4:55492067-55492070 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_55590329_-/TATC chr4:55590328-55590329 TATC ENSMUSG00000066176.3 ENSMUST00000135987.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_55590777_TTTT/- chr4:55590777-55590780 - ENSMUSG00000066176.3 ENSMUST00000135987.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_56089940_CTCT/-/CT chr4:56089940-56089943 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_56089940_CTCT/-/CT chr4:56089940-56089943 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_56697541_C/A chr4:56697541 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_57509288_A/- chr4:57509288 - ENSMUSG00000090053.9 ENSMUST00000102905.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_58671110_GTGT/-/GT chr4:58671110-58671113 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_58671110_GTGT/-/GT chr4:58671110-58671113 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_59376237_ACAC/-/AC chr4:59376237-59376240 - ENSMUSG00000038578.15 ENSMUST00000040166.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_59376237_ACAC/-/AC chr4:59376237-59376240 AC ENSMUSG00000038578.15 ENSMUST00000040166.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_59376237_ACAC/-/AC chr4:59376237-59376240 - ENSMUSG00000038578.15 ENSMUST00000107544.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_59376237_ACAC/-/AC chr4:59376237-59376240 AC ENSMUSG00000038578.15 ENSMUST00000107544.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_59912290_GTGT/-/GT chr4:59912290-59912293 - ENSMUSG00000028386.1 ENSMUST00000030081.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_59912290_GTGT/-/GT chr4:59912290-59912293 GT ENSMUSG00000028386.1 ENSMUST00000030081.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_59923876_TCTC/-/TC chr4:59923876-59923879 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_59923876_TCTC/-/TC chr4:59923876-59923879 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_59986415_C/T chr4:59986415 T ENSMUSG00000078689.8 ENSMUST00000107521.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_60081252_A/G chr4:60081252 G ENSMUSG00000083239.1 ENSMUST00000120720.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4588;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_60667385_-/TTTC chr4:60667384-60667385 TTTC ENSMUSG00000073834.10 ENSMUST00000098046.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4973;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_60741362_TT/- chr4:60741362-60741363 - ENSMUSG00000094793.1 ENSMUST00000117932.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=36;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61305479_-/TCCTCC chr4:61305478-61305479 TCCTCC ENSMUSG00000073830.11 ENSMUST00000071005.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1480;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61305479_-/TCCTCC chr4:61305478-61305479 TCCTCC ENSMUSG00000073830.11 ENSMUST00000075206.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1478;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61305479_-/TCCTCC chr4:61305478-61305479 TCCTCC ENSMUSG00000073830.11 ENSMUST00000125461.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1676;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61305479_-/TCCTCC chr4:61305478-61305479 TCCTCC ENSMUSG00000073830.11 ENSMUST00000136039.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2113;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61409023_CA/TG chr4:61409023-61409024 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_61409034_T/C chr4:61409034 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_61433187_A/T chr4:61433187 T ENSMUSG00000096674.1 ENSMUST00000095049.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2603;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61594090_C/T chr4:61594090 T ENSMUSG00000096688.1 ENSMUST00000107484.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61603576_TGTGTG/-/TG/TGTG chr4:61603576-61603581 - ENSMUSG00000082065.1 ENSMUST00000118437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4711;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61603576_TGTGTG/-/TG/TGTG chr4:61603576-61603581 TG ENSMUSG00000082065.1 ENSMUST00000118437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4711;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61603576_TGTGTG/-/TG/TGTG chr4:61603576-61603581 TGTG ENSMUSG00000082065.1 ENSMUST00000118437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4711;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61615543_C/A chr4:61615543 A ENSMUSG00000082065.1 ENSMUST00000118437.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4560;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_61731209_C/T chr4:61731209 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_63384554_-/AAT chr4:63384553-63384554 AAT ENSMUSG00000039158.11 ENSMUST00000035724.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_63384554_-/AAT chr4:63384553-63384554 AAT ENSMUSG00000039158.11 ENSMUST00000140586.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3350;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_63384554_-/AAT chr4:63384553-63384554 AAT ENSMUSG00000086953.1 ENSMUST00000144095.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_63922113_C/T chr4:63922113 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_64868395_G/A chr4:64868395 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_64868397_-/ACCCTAAGTCT chr4:64868396-64868397 ACCCTAAGTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_65322471_GTGT/- chr4:65322471-65322474 - ENSMUSG00000028370.7 ENSMUST00000084501.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_65819133_A/T chr4:65819133 T ENSMUSG00000028373.16 ENSMUST00000068214.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_65819133_A/T chr4:65819133 T ENSMUSG00000028373.16 ENSMUST00000084496.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_66044532_T/C chr4:66044532 C ENSMUSG00000028373.16 ENSMUST00000068214.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_66044532_T/C chr4:66044532 C ENSMUSG00000028373.16 ENSMUST00000084496.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_66044546_C/T chr4:66044546 T ENSMUSG00000028373.16 ENSMUST00000068214.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_66044546_C/T chr4:66044546 T ENSMUSG00000028373.16 ENSMUST00000084496.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_66965799_C/T chr4:66965799 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_67506842_AA/-/AAA chr4:67506842-67506843 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_67506842_AA/-/AAA chr4:67506842-67506843 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_67813382_TCTC/- chr4:67813382-67813385 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_68926925_ACACAC/-/ACAC chr4:68926925-68926930 - ENSMUSG00000028351.5 ENSMUST00000030036.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_68926925_ACACAC/-/ACAC chr4:68926925-68926930 ACAC ENSMUSG00000028351.5 ENSMUST00000030036.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_69058207_CAAA/C/AAAA/CAAAA chr4:69058207-69058210 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_69058207_CAAA/C/AAAA/CAAAA chr4:69058207-69058210 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_69058207_CAAA/C/AAAA/CAAAA chr4:69058207-69058210 CAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_69410569_T/A chr4:69410569 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_69491764_GTGT/-/GT chr4:69491764-69491767 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_69491764_GTGT/-/GT chr4:69491764-69491767 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_69714729_A/T chr4:69714729 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_70249518_-/A chr4:70249517-70249518 A ENSMUSG00000039298.16 ENSMUST00000076541.12 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_70249518_-/A chr4:70249517-70249518 A ENSMUSG00000080902.1 ENSMUST00000120944.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=144;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_70249518_-/A chr4:70249517-70249518 A ENSMUSG00000039298.16 ENSMUST00000138561.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_70249518_-/A chr4:70249517-70249518 A ENSMUSG00000039298.16 ENSMUST00000140108.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_70249518_-/A chr4:70249517-70249518 A ENSMUSG00000039298.16 ENSMUST00000144099.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_70991794_C/T chr4:70991794 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_71050242_C/T chr4:71050242 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_71109187_A/C chr4:71109187 C ENSMUSG00000084937.1 ENSMUST00000143796.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_71153871_-/TTTC chr4:71153870-71153871 TTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_72370763_ACAC/- chr4:72370763-72370766 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_73302640_C/- chr4:73302640 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_74410876_ATATATATATATATATATATATATATATATATATATATATATATAT/- chr4:74410876-74410921 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_74468765_G/C chr4:74468765 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_74643858_A/T chr4:74643858 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_75247236_TT/-/T/TTT chr4:75247236-75247237 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_75247236_TT/-/T/TTT chr4:75247236-75247237 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_75247236_TT/-/T/TTT chr4:75247236-75247237 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_75459062_AAA/- chr4:75459062-75459064 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_75903367_GTGT/-/GT chr4:75903367-75903370 - ENSMUSG00000081844.1 ENSMUST00000117371.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=212;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75903367_GTGT/-/GT chr4:75903367-75903370 GT ENSMUSG00000081844.1 ENSMUST00000117371.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=212;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000050757.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000098005.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000102834.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000107289.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000173376.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000174023.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000174180.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000174531.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_75961205_TCTC/- chr4:75961205-75961208 - ENSMUSG00000028399.18 ENSMUST00000174831.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 - ENSMUSG00000028399.18 ENSMUST00000107287.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 A ENSMUSG00000028399.18 ENSMUST00000107287.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 - ENSMUSG00000028399.18 ENSMUST00000138955.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 A ENSMUSG00000028399.18 ENSMUST00000138955.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 - ENSMUSG00000028399.18 ENSMUST00000140422.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 A ENSMUSG00000028399.18 ENSMUST00000140422.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 - ENSMUSG00000028399.18 ENSMUST00000156656.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 A ENSMUSG00000028399.18 ENSMUST00000156656.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 - ENSMUSG00000028399.18 ENSMUST00000173592.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77645342_AA/-/A chr4:77645342-77645343 A ENSMUSG00000028399.18 ENSMUST00000173592.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77884700_-/TTTTTTTTTTTTT chr4:77884699-77884700 TTTTTTTTTTTTT ENSMUSG00000028399.18 ENSMUST00000107287.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77884700_-/TTTTTTTTTTTTT chr4:77884699-77884700 TTTTTTTTTTTTT ENSMUSG00000028399.18 ENSMUST00000138955.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77884700_-/TTTTTTTTTTTTT chr4:77884699-77884700 TTTTTTTTTTTTT ENSMUSG00000028399.18 ENSMUST00000140422.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77884700_-/TTTTTTTTTTTTT chr4:77884699-77884700 TTTTTTTTTTTTT ENSMUSG00000028399.18 ENSMUST00000156656.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_77884700_-/TTTTTTTTTTTTT chr4:77884699-77884700 TTTTTTTTTTTTT ENSMUSG00000028399.18 ENSMUST00000173592.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_78322383_TGTG/-/TG chr4:78322383-78322386 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_78322383_TGTG/-/TG chr4:78322383-78322386 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_78441778_G/T chr4:78441778 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_78441788_A/G chr4:78441788 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_78906854_TC/CT chr4:78906854-78906855 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_79954195_-/TCTA chr4:79954194-79954195 TCTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_81705728_T/C chr4:81705728 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_81730909_G/A chr4:81730909 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_81908865_C/T chr4:81908865 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_82294381_AA/- chr4:82294381-82294382 - ENSMUSG00000008575.17 ENSMUST00000050872.14 Transcript 3_prime_UTR_variant 4561-4562 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_82294381_AA/- chr4:82294381-82294382 - ENSMUSG00000008575.17 ENSMUST00000064770.8 Transcript 3_prime_UTR_variant 4223-4224 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_82294381_AA/- chr4:82294381-82294382 - ENSMUSG00000008575.17 ENSMUST00000107245.8 Transcript 3_prime_UTR_variant 4907-4908 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_82294381_AA/- chr4:82294381-82294382 - ENSMUSG00000008575.17 ENSMUST00000107246.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1699;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_82294381_AA/- chr4:82294381-82294382 - ENSMUSG00000008575.17 ENSMUST00000107247.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1666;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_82294381_AA/- chr4:82294381-82294382 - ENSMUSG00000008575.17 ENSMUST00000107248.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1666;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_82736185_GTGTGTGTGTGTGTGTGCATGTGTGTGAGTGTGTGTGTGTGTGAGTGTGTGTGTGAGTGTGTGCGTGTGTGAGTATGTGTGTGCTTGTGTGAGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGA/- chr4:82736185-82736314 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_83485576_-/AA chr4:83485575-83485576 AA ENSMUSG00000028484.16 ENSMUST00000030207.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_83485576_-/AA chr4:83485575-83485576 AA ENSMUSG00000028484.16 ENSMUST00000107214.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_83485576_-/AA chr4:83485575-83485576 AA ENSMUSG00000028484.16 ENSMUST00000107215.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_83485576_-/AA chr4:83485575-83485576 AA ENSMUSG00000028484.16 ENSMUST00000130626.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_83849719_CACA/- chr4:83849719-83849722 - ENSMUSG00000052407.17 ENSMUST00000053414.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_83849719_CACA/- chr4:83849719-83849722 - ENSMUSG00000052407.17 ENSMUST00000125077.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_83849719_CACA/- chr4:83849719-83849722 - ENSMUSG00000052407.17 ENSMUST00000231339.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000102820.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000107198.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000123276.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000175756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000175800.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000175969.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000176346.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000176370.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000176418.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000176612.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000176691.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_84562010_CTCTCT/- chr4:84562010-84562015 - ENSMUSG00000028487.18 ENSMUST00000176947.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_85756408_ATATAT/- chr4:85756408-85756413 - ENSMUSG00000066113.16 ENSMUST00000147066.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_85756408_ATATAT/- chr4:85756408-85756413 - ENSMUSG00000066113.16 ENSMUST00000213098.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_86718929_AA/- chr4:86718929-86718930 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_86733738_T/- chr4:86733738 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_87403380_CACACACACACACACAC/- chr4:87403380-87403396 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_87480407_ACAC/- chr4:87480407-87480410 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_87518975_-/A chr4:87518974-87518975 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_87816178_A/-/AAAAAAAA chr4:87816178 - ENSMUSG00000028496.17 ENSMUST00000078090.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_87816178_A/-/AAAAAAAA chr4:87816178 AAAAAAAA ENSMUSG00000028496.17 ENSMUST00000078090.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_87816178_A/-/AAAAAAAA chr4:87816178 - ENSMUSG00000028496.17 ENSMUST00000128930.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_87816178_A/-/AAAAAAAA chr4:87816178 AAAAAAAA ENSMUSG00000028496.17 ENSMUST00000128930.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88095536_TTTT/-/TTT chr4:88095536-88095539 - ENSMUSG00000038368.16 ENSMUST00000097992.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88095536_TTTT/-/TTT chr4:88095536-88095539 TTT ENSMUSG00000038368.16 ENSMUST00000097992.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88095536_TTTT/-/TTT chr4:88095536-88095539 - ENSMUSG00000038368.16 ENSMUST00000129967.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88095536_TTTT/-/TTT chr4:88095536-88095539 TTT ENSMUSG00000038368.16 ENSMUST00000129967.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88095536_TTTT/-/TTT chr4:88095536-88095539 - ENSMUSG00000038368.16 ENSMUST00000161058.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88095536_TTTT/-/TTT chr4:88095536-88095539 TTT ENSMUSG00000038368.16 ENSMUST00000161058.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88325584_CACA/- chr4:88325584-88325587 - ENSMUSG00000038368.16 ENSMUST00000097992.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88325584_CACA/- chr4:88325584-88325587 - ENSMUSG00000038368.16 ENSMUST00000130603.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88325584_CACA/- chr4:88325584-88325587 - ENSMUSG00000038368.16 ENSMUST00000159342.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_88588112_T/A chr4:88588112 A ENSMUSG00000095270.1 ENSMUST00000102807.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3701;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_89102852_CTCT/- chr4:89102852-89102855 - ENSMUSG00000085569.1 ENSMUST00000154352.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_89622003_GCA/G/ACA chr4:89622003-89622005 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_89622003_GCA/G/ACA chr4:89622003-89622005 ACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_90424472_-/TTTC chr4:90424471-90424472 TTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_90714622_-/GA chr4:90714621-90714622 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_91654946_T/C chr4:91654946 C ENSMUSG00000086042.1 ENSMUST00000123606.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3794;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_91707154_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr4:91707153-91707154 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000082523.1 ENSMUST00000118299.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1484;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_93118561_T/C chr4:93118561 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_93293256_G/- chr4:93293256 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_93501444_AT/- chr4:93501444-93501445 - ENSMUSG00000084833.1 ENSMUST00000137509.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_93501470_A/G chr4:93501470 G ENSMUSG00000084833.1 ENSMUST00000137509.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_94165668_TCTC/- chr4:94165668-94165671 - ENSMUSG00000085931.1 ENSMUST00000126270.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_94450242_-/GAAA chr4:94450241-94450242 GAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_95311061_CTCT/-/CT chr4:95311061-95311064 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_95311061_CTCT/-/CT chr4:95311061-95311064 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_95312238_AGAGAGAG/- chr4:95312238-95312245 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_96306880_T/C chr4:96306880 C ENSMUSG00000066097.6 ENSMUST00000015368.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_96512250_-/CTTT chr4:96512249-96512250 CTTT ENSMUSG00000052914.4 ENSMUST00000030303.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3888;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_96512250_-/CTTT chr4:96512249-96512250 CTTT ENSMUSG00000082932.3 ENSMUST00000124729.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4863;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_96571545_TGTGTG/- chr4:96571545-96571550 - ENSMUSG00000015224.10 ENSMUST00000055693.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_96571545_TGTGTG/- chr4:96571545-96571550 - ENSMUSG00000015224.10 ENSMUST00000126509.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4742;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 - ENSMUSG00000028565.18 ENSMUST00000052018.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 TT ENSMUSG00000028565.18 ENSMUST00000052018.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 - ENSMUSG00000028565.18 ENSMUST00000075448.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 TT ENSMUSG00000028565.18 ENSMUST00000075448.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 - ENSMUSG00000028565.18 ENSMUST00000092532.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 TT ENSMUSG00000028565.18 ENSMUST00000092532.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 - ENSMUSG00000028565.18 ENSMUST00000107057.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 TT ENSMUSG00000028565.18 ENSMUST00000107057.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 - ENSMUSG00000028565.18 ENSMUST00000107062.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 TT ENSMUSG00000028565.18 ENSMUST00000107062.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 - ENSMUSG00000028565.18 ENSMUST00000152023.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_97830218_T/-/TT chr4:97830218 TT ENSMUSG00000028565.18 ENSMUST00000152023.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_98657334_TGTG/- chr4:98657334-98657337 - ENSMUSG00000061859.16 ENSMUST00000030290.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_98657334_TGTG/- chr4:98657334-98657337 - ENSMUSG00000061859.16 ENSMUST00000041284.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_98657334_TGTG/- chr4:98657334-98657337 - ENSMUSG00000076294.1 ENSMUST00000102339.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4300;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_98657334_TGTG/- chr4:98657334-98657337 - ENSMUSG00000061859.16 ENSMUST00000102792.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_98657334_TGTG/- chr4:98657334-98657337 - ENSMUSG00000061859.16 ENSMUST00000107029.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_98657334_TGTG/- chr4:98657334-98657337 - ENSMUSG00000061859.16 ENSMUST00000107034.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_99248549_T/G chr4:99248549 G ENSMUSG00000028550.15 ENSMUST00000030279.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_99248549_T/G chr4:99248549 G ENSMUSG00000028550.15 ENSMUST00000180278.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_99314821_AC/A/CC chr4:99314821-99314822 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_99314821_AC/A/CC chr4:99314821-99314822 CC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_100022974_A/G chr4:100022974 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_100096916_GTGT/- chr4:100096916-100096919 - ENSMUSG00000035305.5 ENSMUST00000039630.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_100509654_GTGT/- chr4:100509654-100509657 - ENSMUSG00000069733.11 ENSMUST00000092730.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_100509654_GTGT/- chr4:100509654-100509657 - ENSMUSG00000069733.11 ENSMUST00000133493.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_100676825_T/C chr4:100676825 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_100912685_CACA/- chr4:100912685-100912688 - ENSMUSG00000028532.14 ENSMUST00000030257.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_100912685_CACA/- chr4:100912685-100912688 - ENSMUSG00000028532.14 ENSMUST00000097955.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000106904.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000106907.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000106908.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000106911.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000133632.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4645;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000172616.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000173119.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102465752_G/T chr4:102465752 T ENSMUSG00000028525.16 ENSMUST00000174186.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102619796_-/TATC chr4:102619795-102619796 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000066824.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3501;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000072481.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3711;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000080728.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3729;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000097948.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000106882.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3891;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000136164.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3721;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000137592.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3694;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000140289.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3741;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000142430.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2588;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000156596.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3718;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_102756631_GTGT/- chr4:102756631-102756634 - ENSMUSG00000028524.21 ENSMUST00000183855.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3831;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_104474462_TT/- chr4:104474462-104474463 - ENSMUSG00000028519.16 ENSMUST00000106827.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_104474462_TT/- chr4:104474462-104474463 - ENSMUSG00000028519.16 ENSMUST00000106830.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_104474462_TT/- chr4:104474462-104474463 - ENSMUSG00000028519.16 ENSMUST00000143644.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_104474462_TT/- chr4:104474462-104474463 - ENSMUSG00000028519.16 ENSMUST00000146078.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_105173715_AAAAAA/- chr4:105173715-105173720 - ENSMUSG00000028517.8 ENSMUST00000064139.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_105307123_GT/- chr4:105307123-105307124 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_105382991_-/ATCT chr4:105382990-105382991 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_105730873_AA/- chr4:105730873-105730874 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_106858819_AA/-/AAA chr4:106858819-106858820 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_106858819_AA/-/AAA chr4:106858819-106858820 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_107703539_AGAG/- chr4:107703539-107703542 - ENSMUSG00000085549.7 ENSMUST00000140321.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3492;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_107703539_AGAG/- chr4:107703539-107703542 - ENSMUSG00000085549.7 ENSMUST00000143064.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_107703539_AGAG/- chr4:107703539-107703542 - ENSMUSG00000085549.7 ENSMUST00000147654.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3515;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_107703539_AGAG/- chr4:107703539-107703542 - ENSMUSG00000085549.7 ENSMUST00000151438.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108119737_AA/- chr4:108119737-108119738 - ENSMUSG00000028603.15 ENSMUST00000030340.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1205;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108119737_AA/- chr4:108119737-108119738 - ENSMUSG00000028603.15 ENSMUST00000123792.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1342;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108119737_AA/- chr4:108119737-108119738 - ENSMUSG00000028603.15 ENSMUST00000130776.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108119737_AA/- chr4:108119737-108119738 - ENSMUSG00000028603.15 ENSMUST00000135379.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1261;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108119737_AA/- chr4:108119737-108119738 - ENSMUSG00000028603.15 ENSMUST00000143340.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108119737_AA/- chr4:108119737-108119738 - ENSMUSG00000028603.15 ENSMUST00000149106.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1233;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108448104_AAA/-/AA chr4:108448104-108448106 - ENSMUSG00000083255.1 ENSMUST00000122349.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2701;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108448104_AAA/-/AA chr4:108448104-108448106 AA ENSMUSG00000083255.1 ENSMUST00000122349.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2701;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 - ENSMUSG00000034610.14 ENSMUST00000043368.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 AAA ENSMUSG00000034610.14 ENSMUST00000043368.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 - ENSMUSG00000034610.14 ENSMUST00000097925.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 AAA ENSMUSG00000034610.14 ENSMUST00000097925.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 - ENSMUSG00000034610.14 ENSMUST00000138809.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 AAA ENSMUSG00000034610.14 ENSMUST00000138809.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 - ENSMUSG00000034610.14 ENSMUST00000155068.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4019;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108528369_AA/-/AAA chr4:108528369-108528370 AAA ENSMUSG00000034610.14 ENSMUST00000155068.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4019;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108760276_G/A chr4:108760276 A ENSMUSG00000034557.14 ENSMUST00000106657.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108760276_G/A chr4:108760276 A ENSMUSG00000034557.14 ENSMUST00000106658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108760276_G/A chr4:108760276 A ENSMUSG00000094958.1 ENSMUST00000178992.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108868302_TTT/-/TT/TTTT chr4:108868302-108868304 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_108868302_TTT/-/TT/TTTT chr4:108868302-108868304 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_108868302_TTT/-/TT/TTTT chr4:108868302-108868304 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_108929104_C/T chr4:108929104 T ENSMUSG00000003411.10 ENSMUST00000003502.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108929104_C/T chr4:108929104 T ENSMUSG00000003411.10 ENSMUST00000106650.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108929104_C/T chr4:108929104 T ENSMUSG00000003411.10 ENSMUST00000106651.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_108929104_C/T chr4:108929104 T ENSMUSG00000082699.1 ENSMUST00000119330.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4469;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109227225_CACA/-/CACACA chr4:109227225-109227228 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_109227225_CACA/-/CACACA chr4:109227225-109227228 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_109388304_TT/- chr4:109388304-109388305 - ENSMUSG00000028552.13 ENSMUST00000030281.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1738;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109388304_TT/- chr4:109388304-109388305 - ENSMUSG00000028552.13 ENSMUST00000102729.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=487;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109388304_TT/- chr4:109388304-109388305 - ENSMUSG00000028552.13 ENSMUST00000132165.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2839;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109388304_TT/- chr4:109388304-109388305 - ENSMUSG00000028552.13 ENSMUST00000175776.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2839;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109388304_TT/- chr4:109388304-109388305 - ENSMUSG00000028552.13 ENSMUST00000176251.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2617;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109388304_TT/- chr4:109388304-109388305 - ENSMUSG00000028552.13 ENSMUST00000177192.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2521;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109658483_GTGT/- chr4:109658483-109658486 - ENSMUSG00000028551.14 ENSMUST00000063531.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109658483_GTGT/- chr4:109658483-109658486 - ENSMUSG00000028551.14 ENSMUST00000097921.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109658483_GTGT/- chr4:109658483-109658486 - ENSMUSG00000087641.1 ENSMUST00000125237.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1692;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109658483_GTGT/- chr4:109658483-109658486 - ENSMUSG00000059027.14 ENSMUST00000126635.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=875;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109658483_GTGT/- chr4:109658483-109658486 - ENSMUSG00000059027.14 ENSMUST00000127391.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4352;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109658483_GTGT/- chr4:109658483-109658486 - ENSMUSG00000059027.14 ENSMUST00000131216.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=630;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_109658483_GTGT/- chr4:109658483-109658486 - ENSMUSG00000059027.14 ENSMUST00000156790.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=656;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_110136692_TCTC/- chr4:110136692-110136695 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_110493692_G/- chr4:110493692 - ENSMUSG00000061298.14 ENSMUST00000080744.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_110493692_G/- chr4:110493692 - ENSMUSG00000061298.14 ENSMUST00000097920.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_110493692_G/- chr4:110493692 - ENSMUSG00000061298.14 ENSMUST00000106587.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_110493692_G/- chr4:110493692 - ENSMUSG00000061298.14 ENSMUST00000106589.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_110493692_G/- chr4:110493692 - ENSMUSG00000061298.14 ENSMUST00000106591.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_110493692_G/- chr4:110493692 - ENSMUSG00000061298.14 ENSMUST00000106592.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_111654320_TGTG/- chr4:111654320-111654323 - ENSMUSG00000061298.14 ENSMUST00000080744.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_111654320_TGTG/- chr4:111654320-111654323 - ENSMUSG00000061298.14 ENSMUST00000097920.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_111654320_TGTG/- chr4:111654320-111654323 - ENSMUSG00000061298.14 ENSMUST00000106592.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_111654320_TGTG/- chr4:111654320-111654323 - ENSMUSG00000061298.14 ENSMUST00000142460.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_111654320_TGTG/- chr4:111654320-111654323 - ENSMUSG00000061298.14 ENSMUST00000154123.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_111700968_AGAGAG/- chr4:111700968-111700973 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_112326931_CCCAAA/- chr4:112326931-112326936 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_112568720_T/A chr4:112568720 A ENSMUSG00000034359.16 ENSMUST00000106560.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_112568720_T/A chr4:112568720 A ENSMUSG00000083753.1 ENSMUST00000117091.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_112568747_C/T chr4:112568747 T ENSMUSG00000034359.16 ENSMUST00000106560.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_112568747_C/T chr4:112568747 T ENSMUSG00000083753.1 ENSMUST00000117091.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_112959456_AAA/- chr4:112959456-112959458 - ENSMUSG00000083011.1 ENSMUST00000118069.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_112959456_AAA/- chr4:112959456-112959458 - ENSMUSG00000087194.9 ENSMUST00000138966.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_112959456_AAA/- chr4:112959456-112959458 - ENSMUSG00000087194.9 ENSMUST00000171224.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_113202920_T/A chr4:113202920 A ENSMUSG00000087194.9 ENSMUST00000138966.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_113202920_T/A chr4:113202920 A ENSMUSG00000087194.9 ENSMUST00000171224.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_113202928_T/A chr4:113202928 A ENSMUSG00000087194.9 ENSMUST00000138966.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_113202928_T/A chr4:113202928 A ENSMUSG00000087194.9 ENSMUST00000171224.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115337343_A/G chr4:115337343 G ENSMUSG00000066071.6 ENSMUST00000084343.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4528;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115337350_G/T chr4:115337350 T ENSMUSG00000066071.6 ENSMUST00000084343.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4535;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 - ENSMUSG00000034210.13 ENSMUST00000074425.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 AAA ENSMUSG00000034210.13 ENSMUST00000074425.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 - ENSMUSG00000034210.13 ENSMUST00000106522.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 AAA ENSMUSG00000034210.13 ENSMUST00000106522.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 - ENSMUSG00000034210.13 ENSMUST00000106524.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 AAA ENSMUSG00000034210.13 ENSMUST00000106524.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 - ENSMUSG00000034210.13 ENSMUST00000106525.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 AAA ENSMUSG00000034210.13 ENSMUST00000106525.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 - ENSMUSG00000034210.13 ENSMUST00000132306.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 AAA ENSMUSG00000034210.13 ENSMUST00000132306.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 - ENSMUSG00000034210.13 ENSMUST00000136593.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115747617_AA/-/AAA chr4:115747617-115747618 AAA ENSMUSG00000034210.13 ENSMUST00000136593.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_115948651_GTGT/- chr4:115948651-115948654 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_116085975_ACAC/- chr4:116085975-116085978 - ENSMUSG00000028703.14 ENSMUST00000030471.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116085975_ACAC/- chr4:116085975-116085978 - ENSMUSG00000028703.14 ENSMUST00000133799.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116085975_ACAC/- chr4:116085975-116085978 - ENSMUSG00000028703.14 ENSMUST00000134983.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3504;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116085975_ACAC/- chr4:116085975-116085978 - ENSMUSG00000028703.14 ENSMUST00000138952.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116085975_ACAC/- chr4:116085975-116085978 - ENSMUSG00000028703.14 ENSMUST00000152577.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2921;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116085975_ACAC/- chr4:116085975-116085978 - ENSMUSG00000028703.14 ENSMUST00000154274.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2919;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 - ENSMUSG00000028702.15 ENSMUST00000102704.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 A ENSMUSG00000028702.15 ENSMUST00000102704.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 - ENSMUSG00000028702.15 ENSMUST00000102705.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 A ENSMUSG00000028702.15 ENSMUST00000102705.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 - ENSMUSG00000028702.15 ENSMUST00000143089.1 Transcript non_coding_transcript_exon_variant 1426-1427 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 A ENSMUSG00000028702.15 ENSMUST00000143089.1 Transcript non_coding_transcript_exon_variant 1426-1427 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 - ENSMUSG00000028702.15 ENSMUST00000152741.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116117917_AA/-/A chr4:116117917-116117918 A ENSMUSG00000028702.15 ENSMUST00000152741.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116132939_-/A chr4:116132938-116132939 A ENSMUSG00000028701.4 ENSMUST00000030469.4 Transcript 3_prime_UTR_variant 5209-5210 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116132939_-/A chr4:116132938-116132939 A ENSMUSG00000028700.14 ENSMUST00000120083.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4298;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116132939_-/A chr4:116132938-116132939 A ENSMUSG00000028700.14 ENSMUST00000121052.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4816;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116132939_-/A chr4:116132938-116132939 A ENSMUSG00000028701.4 ENSMUST00000135982.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4581;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116132939_-/A chr4:116132938-116132939 A ENSMUSG00000028700.14 ENSMUST00000136855.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4313;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116132939_-/A chr4:116132938-116132939 A ENSMUSG00000028700.14 ENSMUST00000144311.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116414622_T/A chr4:116414622 A ENSMUSG00000003810.12 ENSMUST00000003908.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116414622_T/A chr4:116414622 A ENSMUSG00000003810.12 ENSMUST00000106484.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116414622_T/A chr4:116414622 A ENSMUSG00000003810.12 ENSMUST00000106485.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116414622_T/A chr4:116414622 A ENSMUSG00000003810.12 ENSMUST00000106486.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116414622_T/A chr4:116414622 A ENSMUSG00000003810.12 ENSMUST00000151347.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 - ENSMUSG00000028693.15 ENSMUST00000030456.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=747;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 AAA ENSMUSG00000028693.15 ENSMUST00000030456.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=747;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 - ENSMUSG00000028693.15 ENSMUST00000030457.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1191;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 AAA ENSMUSG00000028693.15 ENSMUST00000030457.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1191;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 - ENSMUSG00000028693.15 ENSMUST00000081182.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1210;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 AAA ENSMUSG00000028693.15 ENSMUST00000081182.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1210;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 - ENSMUSG00000028693.15 ENSMUST00000134038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4766;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 AAA ENSMUSG00000028693.15 ENSMUST00000134038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4766;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 - ENSMUSG00000028693.15 ENSMUST00000148436.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 AAA ENSMUSG00000028693.15 ENSMUST00000148436.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 - ENSMUSG00000028693.15 ENSMUST00000154811.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_116628688_AA/-/AAA chr4:116628688-116628689 AAA ENSMUSG00000028693.15 ENSMUST00000154811.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117343937_TCTC/- chr4:117343937-117343940 - ENSMUSG00000028677.19 ENSMUST00000030439.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117343937_TCTC/- chr4:117343937-117343940 - ENSMUSG00000028677.19 ENSMUST00000094853.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117343937_TCTC/- chr4:117343937-117343940 - ENSMUSG00000028677.19 ENSMUST00000138435.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117537786_ACACAC/-/ACACACAC chr4:117537786-117537791 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_117537786_ACACAC/-/ACACACAC chr4:117537786-117537791 ACACACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000030269.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000030269.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000063857.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000063857.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000123994.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3227;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000123994.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3227;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000132043.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000132043.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000135769.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3279;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000135769.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3279;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000136476.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000136476.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000149168.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000149168.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000163288.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000163288.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000091237.1 ENSMUST00000164716.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000091237.1 ENSMUST00000164716.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000169885.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000169885.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 - ENSMUSG00000028542.17 ENSMUST00000169990.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117852262_GTGT/-/GTGTGT chr4:117852262-117852265 GTGTGT ENSMUSG00000028542.17 ENSMUST00000169990.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 - ENSMUSG00000028538.12 ENSMUST00000030263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 ACACAC ENSMUSG00000028538.12 ENSMUST00000030263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 - ENSMUSG00000028538.12 ENSMUST00000097912.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 ACACAC ENSMUSG00000028538.12 ENSMUST00000097912.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 - ENSMUSG00000028538.12 ENSMUST00000106410.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 ACACAC ENSMUSG00000028538.12 ENSMUST00000106410.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 - ENSMUSG00000028538.12 ENSMUST00000138274.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 ACACAC ENSMUSG00000028538.12 ENSMUST00000138274.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 - ENSMUSG00000086554.1 ENSMUST00000146982.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_117975446_ACACACAC/-/ACACAC chr4:117975446-117975453 ACACAC ENSMUSG00000086554.1 ENSMUST00000146982.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118426869_-/T chr4:118426868-118426869 T ENSMUSG00000006390.15 ENSMUST00000006557.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1224;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118426869_-/T chr4:118426868-118426869 T ENSMUSG00000006390.15 ENSMUST00000067896.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2832;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118426869_-/T chr4:118426868-118426869 T ENSMUSG00000006390.15 ENSMUST00000102673.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1256;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118426869_-/T chr4:118426868-118426869 T ENSMUSG00000006390.15 ENSMUST00000129419.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1305;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118426869_-/T chr4:118426868-118426869 T ENSMUSG00000006390.15 ENSMUST00000135162.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1261;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118426869_-/T chr4:118426868-118426869 T ENSMUSG00000006390.15 ENSMUST00000143140.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1339;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118426869_-/T chr4:118426868-118426869 T ENSMUSG00000006390.15 ENSMUST00000167636.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1250;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118559726_GTGT/- chr4:118559726-118559729 - ENSMUSG00000028730.14 ENSMUST00000071972.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118559726_GTGT/- chr4:118559726-118559729 - ENSMUSG00000028730.14 ENSMUST00000081921.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_118640135_A/T chr4:118640135 T ENSMUSG00000085292.1 ENSMUST00000134971.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4073;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119629735_GTGT/- chr4:119629735-119629738 - ENSMUSG00000032998.16 ENSMUST00000044564.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=616;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119629735_GTGT/- chr4:119629735-119629738 - ENSMUSG00000032998.16 ENSMUST00000106310.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=616;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119681369_CACACA/-/CACA chr4:119681369-119681374 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_119681369_CACACA/-/CACA chr4:119681369-119681374 CACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_119722557_TATC/- chr4:119722557-119722560 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_119818036_A/T chr4:119818036 T ENSMUSG00000028634.17 ENSMUST00000106307.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818036_A/T chr4:119818036 T ENSMUSG00000028634.17 ENSMUST00000123698.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818036_A/T chr4:119818036 T ENSMUSG00000028634.17 ENSMUST00000125069.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818036_A/T chr4:119818036 T ENSMUSG00000028634.17 ENSMUST00000136547.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818036_A/T chr4:119818036 T ENSMUSG00000028634.17 ENSMUST00000141605.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818036_A/T chr4:119818036 T ENSMUSG00000028634.17 ENSMUST00000143837.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818036_A/T chr4:119818036 T ENSMUSG00000028634.17 ENSMUST00000144907.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3288;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818041_C/T chr4:119818041 T ENSMUSG00000028634.17 ENSMUST00000106307.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818041_C/T chr4:119818041 T ENSMUSG00000028634.17 ENSMUST00000123698.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818041_C/T chr4:119818041 T ENSMUSG00000028634.17 ENSMUST00000125069.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818041_C/T chr4:119818041 T ENSMUSG00000028634.17 ENSMUST00000136547.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818041_C/T chr4:119818041 T ENSMUSG00000028634.17 ENSMUST00000141605.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818041_C/T chr4:119818041 T ENSMUSG00000028634.17 ENSMUST00000143837.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_119818041_C/T chr4:119818041 T ENSMUSG00000028634.17 ENSMUST00000144907.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3293;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120397818_TT/- chr4:120397818-120397819 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_120793318_T/A chr4:120793318 A ENSMUSG00000032897.17 ENSMUST00000043429.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793318_T/A chr4:120793318 A ENSMUSG00000032897.17 ENSMUST00000097906.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2837;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793318_T/A chr4:120793318 A ENSMUSG00000032897.17 ENSMUST00000118902.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793318_T/A chr4:120793318 A ENSMUSG00000032897.17 ENSMUST00000120779.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793318_T/A chr4:120793318 A ENSMUSG00000032897.17 ENSMUST00000134979.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793318_T/A chr4:120793318 A ENSMUSG00000032897.17 ENSMUST00000136236.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793318_T/A chr4:120793318 A ENSMUSG00000032897.17 ENSMUST00000145658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793336_C/A chr4:120793336 A ENSMUSG00000032897.17 ENSMUST00000043429.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793336_C/A chr4:120793336 A ENSMUSG00000032897.17 ENSMUST00000097906.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2855;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793336_C/A chr4:120793336 A ENSMUSG00000032897.17 ENSMUST00000118902.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793336_C/A chr4:120793336 A ENSMUSG00000032897.17 ENSMUST00000120779.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793336_C/A chr4:120793336 A ENSMUSG00000032897.17 ENSMUST00000134979.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793336_C/A chr4:120793336 A ENSMUSG00000032897.17 ENSMUST00000136236.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120793336_C/A chr4:120793336 A ENSMUSG00000032897.17 ENSMUST00000145658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120903931_AG/- chr4:120903931-120903932 - ENSMUSG00000082200.1 ENSMUST00000118758.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2271;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_120903931_AG/- chr4:120903931-120903932 - ENSMUSG00000089381.1 ENSMUST00000158756.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=368;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_121105126_AC/- chr4:121105126-121105127 - ENSMUSG00000078577.3 ENSMUST00000106268.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=524;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_121220061_C/T chr4:121220061 T ENSMUSG00000049878.13 ENSMUST00000056635.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4977;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_121220061_C/T chr4:121220061 T ENSMUSG00000049878.13 ENSMUST00000222814.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4977;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_121458602_AGAG/-/AG chr4:121458602-121458605 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_121458602_AGAG/-/AG chr4:121458602-121458605 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_121662434_TGTG/-/TGTGTG chr4:121662434-121662437 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_121662434_TGTG/-/TGTGTG chr4:121662434-121662437 TGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_123320827_-/CACACACACACA chr4:123320826-123320827 CACACACACACA ENSMUSG00000032726.12 ENSMUST00000040496.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_123320827_-/CACACACACACA chr4:123320826-123320827 CACACACACACA ENSMUSG00000076436.1 ENSMUST00000102640.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1048;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_123320827_-/CACACACACACA chr4:123320826-123320827 CACACACACACA ENSMUSG00000032726.12 ENSMUST00000102641.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_124158857_GTGT/- chr4:124158857-124158860 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_125330029_-/G chr4:125330028-125330029 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_125371984_ACAC/-/AC chr4:125371984-125371987 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_125371984_ACAC/-/AC chr4:125371984-125371987 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_125379918_ACACACACACAC/- chr4:125379918-125379929 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_125487926_GTGT/- chr4:125487926-125487929 - ENSMUSG00000001985.9 ENSMUST00000030676.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2771;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_125955372_A/G chr4:125955372 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_126089549_-/GAAA chr4:126089548-126089549 GAAA ENSMUSG00000042616.8 ENSMUST00000035497.4 Transcript 3_prime_UTR_variant 2366-2367 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126089549_-/GAAA chr4:126089548-126089549 GAAA ENSMUSG00000042616.8 ENSMUST00000129968.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=889;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126089549_-/GAAA chr4:126089548-126089549 GAAA ENSMUSG00000042616.8 ENSMUST00000143712.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=884;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 - ENSMUSG00000042616.8 ENSMUST00000035497.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1793;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 AC ENSMUSG00000042616.8 ENSMUST00000035497.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1793;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 - ENSMUSG00000050188.8 ENSMUST00000055575.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2632;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 AC ENSMUSG00000050188.8 ENSMUST00000055575.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2632;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 - ENSMUSG00000050188.8 ENSMUST00000151831.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2669;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 AC ENSMUSG00000050188.8 ENSMUST00000151831.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2669;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 - ENSMUSG00000050188.8 ENSMUST00000179323.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2662;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126093988_ACAC/-/AC chr4:126093988-126093991 AC ENSMUSG00000050188.8 ENSMUST00000179323.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2662;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126224714_GTGT/-/GT chr4:126224714-126224717 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_126224714_GTGT/-/GT chr4:126224714-126224717 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_126477655_-/A chr4:126477654-126477655 A ENSMUSG00000082381.1 ENSMUST00000117115.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=355;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_126477655_-/A chr4:126477654-126477655 A ENSMUSG00000084099.1 ENSMUST00000122406.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=983;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_127322741_ACACAC/- chr4:127322741-127322746 - ENSMUSG00000042367.12 ENSMUST00000046532.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2489;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_127322741_ACACAC/- chr4:127322741-127322746 - ENSMUSG00000042367.12 ENSMUST00000106091.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2489;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_127851900_AGAG/- chr4:127851900-127851903 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_129269359_TTTT/- chr4:129269359-129269362 - ENSMUSG00000087575.7 ENSMUST00000150171.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4349;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_129269359_TTTT/- chr4:129269359-129269362 - ENSMUSG00000087575.7 ENSMUST00000153817.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4349;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_129284531_AA/- chr4:129284531-129284532 - ENSMUSG00000001333.9 ENSMUST00000102599.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3085;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_129284531_AA/- chr4:129284531-129284532 - ENSMUSG00000001333.9 ENSMUST00000146448.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3099;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_129284531_AA/- chr4:129284531-129284532 - ENSMUSG00000093163.1 ENSMUST00000175422.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130545540_TGTG/- chr4:130545540-130545543 - ENSMUSG00000078532.9 ENSMUST00000105993.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130545540_TGTG/- chr4:130545540-130545543 - ENSMUSG00000078532.9 ENSMUST00000180498.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130545540_TGTG/- chr4:130545540-130545543 - ENSMUSG00000078532.9 ENSMUST00000180884.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130786236_TT/- chr4:130786236-130786237 - ENSMUSG00000028580.15 ENSMUST00000030315.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4672;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130786236_TT/- chr4:130786236-130786237 - ENSMUSG00000028580.15 ENSMUST00000105991.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130786236_TT/- chr4:130786236-130786237 - ENSMUSG00000028580.15 ENSMUST00000105992.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130786236_TT/- chr4:130786236-130786237 - ENSMUSG00000086548.1 ENSMUST00000152986.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_130872953_TTTTT/- chr4:130872953-130872957 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_131351934_-/TTCT chr4:131351933-131351934 TTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_131706170_GTGT/- chr4:131706170-131706173 - ENSMUSG00000086856.1 ENSMUST00000152128.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_132597229_A/T chr4:132597229 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000044521.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000105915.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000105916.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000135548.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000142524.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000145682.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000154482.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000154646.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_133017983_GAGA/- chr4:133017983-133017986 - ENSMUSG00000037692.14 ENSMUST00000156677.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134461895_ACAC/- chr4:134461895-134461898 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_134544917_GTGT/-/GT chr4:134544917-134544920 - ENSMUSG00000050989.9 ENSMUST00000060435.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134544917_GTGT/-/GT chr4:134544917-134544920 GT ENSMUSG00000050989.9 ENSMUST00000060435.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134544917_GTGT/-/GT chr4:134544917-134544920 - ENSMUSG00000050989.9 ENSMUST00000127585.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3895;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134544917_GTGT/-/GT chr4:134544917-134544920 GT ENSMUSG00000050989.9 ENSMUST00000127585.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3895;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134577384_ACACAC/-/ACAC chr4:134577384-134577389 - ENSMUSG00000037306.13 ENSMUST00000038628.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134577384_ACACAC/-/ACAC chr4:134577384-134577389 ACAC ENSMUSG00000037306.13 ENSMUST00000038628.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134577384_ACACAC/-/ACAC chr4:134577384-134577389 - ENSMUSG00000037306.13 ENSMUST00000054096.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134577384_ACACAC/-/ACAC chr4:134577384-134577389 ACAC ENSMUSG00000037306.13 ENSMUST00000054096.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134577384_ACACAC/-/ACAC chr4:134577384-134577389 - ENSMUSG00000037306.13 ENSMUST00000176606.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134577384_ACACAC/-/ACAC chr4:134577384-134577389 ACAC ENSMUSG00000037306.13 ENSMUST00000176606.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134912149_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr4:134912148-134912149 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000028822.11 ENSMUST00000030626.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134912149_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr4:134912148-134912149 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000028822.11 ENSMUST00000105863.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_134963897_C/A chr4:134963897 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_135552496_ACAC/- chr4:135552496-135552499 - ENSMUSG00000037188.7 ENSMUST00000105855.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135914510_AA/- chr4:135914510-135914511 - ENSMUSG00000062585.11 ENSMUST00000068830.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135914510_AA/- chr4:135914510-135914511 - ENSMUSG00000062585.11 ENSMUST00000097843.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028670.14 ENSMUST00000067567.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=594;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028669.15 ENSMUST00000105851.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028670.14 ENSMUST00000105852.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1291;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028669.15 ENSMUST00000123404.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028669.15 ENSMUST00000123737.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3174;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028670.14 ENSMUST00000145350.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=632;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028669.15 ENSMUST00000147458.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3176;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028669.15 ENSMUST00000150885.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2846;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028670.14 ENSMUST00000150978.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=617;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_135973220_T/A chr4:135973220 A ENSMUSG00000028670.14 ENSMUST00000156948.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2750;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136064527_T/- chr4:136064527 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_136449308_TT/-/T/TTT chr4:136449308-136449309 - ENSMUSG00000070687.11 ENSMUST00000088677.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4910;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136449308_TT/-/T/TTT chr4:136449308-136449309 T ENSMUSG00000070687.11 ENSMUST00000088677.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4910;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136449308_TT/-/T/TTT chr4:136449308-136449309 TTT ENSMUSG00000070687.11 ENSMUST00000088677.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4910;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136531051_ATTT/- chr4:136531051-136531054 - ENSMUSG00000001089.14 ENSMUST00000063021.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136531051_ATTT/- chr4:136531051-136531054 - ENSMUSG00000001089.14 ENSMUST00000105849.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136531051_ATTT/- chr4:136531051-136531054 - ENSMUSG00000001089.14 ENSMUST00000129230.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136531051_ATTT/- chr4:136531051-136531054 - ENSMUSG00000001089.14 ENSMUST00000170102.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136711372_-/AGAT chr4:136711371-136711372 AGAT ENSMUSG00000028664.14 ENSMUST00000059287.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136711372_-/AGAT chr4:136711371-136711372 AGAT ENSMUSG00000028664.14 ENSMUST00000105845.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136711372_-/AGAT chr4:136711371-136711372 AGAT ENSMUSG00000028664.14 ENSMUST00000105846.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_136951336_AA/- chr4:136951336-136951337 - ENSMUSG00000028661.8 ENSMUST00000030420.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_137275058_CACA/-/CA chr4:137275058-137275061 - ENSMUSG00000036856.4 ENSMUST00000045747.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2428;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_137275058_CACA/-/CA chr4:137275058-137275061 CA ENSMUSG00000036856.4 ENSMUST00000045747.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2428;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_137431895_CACACA/- chr4:137431895-137431900 - ENSMUSG00000023433.8 ENSMUST00000102522.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1355;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_137431895_CACACA/- chr4:137431895-137431900 - ENSMUSG00000086845.1 ENSMUST00000140495.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4679;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_137818851_AAAT/- chr4:137818851-137818854 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_137930788_ACACAC/- chr4:137930788-137930793 - ENSMUSG00000057530.14 ENSMUST00000102518.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_137930788_ACACAC/- chr4:137930788-137930793 - ENSMUSG00000057530.14 ENSMUST00000129607.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4736;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_137930788_ACACAC/- chr4:137930788-137930793 - ENSMUSG00000057530.14 ENSMUST00000151110.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000058133.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000084214.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000084215.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000105830.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000105831.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000132194.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000139759.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000155142.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=246;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138004506_T/- chr4:138004506 - ENSMUSG00000028760.16 ENSMUST00000203828.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138432512_AA/- chr4:138432512-138432513 - ENSMUSG00000041241.12 ENSMUST00000044058.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2158;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138432512_AA/- chr4:138432512-138432513 - ENSMUSG00000041241.12 ENSMUST00000105813.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2164;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138432512_AA/- chr4:138432512-138432513 - ENSMUSG00000041241.12 ENSMUST00000105815.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2210;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_138448180_A/C chr4:138448180 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_138960298_-/CTTT chr4:138960297-138960298 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_139172925_ATCT/- chr4:139172925-139172928 - ENSMUSG00000073739.3 ENSMUST00000097827.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2477;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139412077_-/ATCT chr4:139412076-139412077 ATCT ENSMUSG00000066036.14 ENSMUST00000097822.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139412077_-/ATCT chr4:139412076-139412077 ATCT ENSMUSG00000066036.14 ENSMUST00000129949.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2393;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139412077_-/ATCT chr4:139412076-139412077 ATCT ENSMUSG00000066036.14 ENSMUST00000147999.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139412077_-/ATCT chr4:139412076-139412077 ATCT ENSMUSG00000066036.14 ENSMUST00000149995.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4135;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139412077_-/ATCT chr4:139412076-139412077 ATCT ENSMUSG00000066036.14 ENSMUST00000165860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139457310_-/GCACTTTGGTTATTCAGGTCCATCAA chr4:139457309-139457310 GCACTTTGGTTATTCAGGTCCATCAA ENSMUSG00000066036.14 ENSMUST00000097822.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139457310_-/GCACTTTGGTTATTCAGGTCCATCAA chr4:139457309-139457310 GCACTTTGGTTATTCAGGTCCATCAA ENSMUSG00000066036.14 ENSMUST00000147999.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139457310_-/GCACTTTGGTTATTCAGGTCCATCAA chr4:139457309-139457310 GCACTTTGGTTATTCAGGTCCATCAA ENSMUSG00000066036.14 ENSMUST00000165860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139528837_TTT/-/TT chr4:139528837-139528839 - ENSMUSG00000041025.15 ENSMUST00000040023.15 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2850;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139528837_TTT/-/TT chr4:139528837-139528839 TT ENSMUSG00000041025.15 ENSMUST00000040023.15 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2850;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139528837_TTT/-/TT chr4:139528837-139528839 - ENSMUSG00000041025.15 ENSMUST00000123827.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139528837_TTT/-/TT chr4:139528837-139528839 TT ENSMUSG00000041025.15 ENSMUST00000123827.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139756949_G/C chr4:139756949 C ENSMUSG00000028736.13 ENSMUST00000030508.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139756949_G/C chr4:139756949 C ENSMUSG00000028736.13 ENSMUST00000174681.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139756954_ATGCTGG/- chr4:139756954-139756960 - ENSMUSG00000028736.13 ENSMUST00000030508.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_139756954_ATGCTGG/- chr4:139756954-139756960 - ENSMUSG00000028736.13 ENSMUST00000174681.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_140349916_GTGTGT/- chr4:140349916-140349921 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_140490063_-/ATAG chr4:140490062-140490063 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_141291013_T/A chr4:141291013 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_141369400_AAAAA/- chr4:141369400-141369404 - ENSMUSG00000006218.4 ENSMUST00000006380.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141581395_-/AA chr4:141581394-141581395 AA ENSMUSG00000006219.12 ENSMUST00000006381.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141581395_-/AA chr4:141581394-141581395 AA ENSMUSG00000006219.12 ENSMUST00000105784.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141581395_-/AA chr4:141581394-141581395 AA ENSMUSG00000006219.12 ENSMUST00000105785.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141774915_GTGT/- chr4:141774915-141774918 - ENSMUSG00000040697.10 ENSMUST00000038014.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141774915_GTGT/- chr4:141774915-141774918 - ENSMUSG00000040697.10 ENSMUST00000138654.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=262;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141971233_G/A chr4:141971233 A ENSMUSG00000051435.11 ENSMUST00000105779.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141971233_G/A chr4:141971233 A ENSMUSG00000051435.11 ENSMUST00000105780.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141971233_G/A chr4:141971233 A ENSMUSG00000051435.11 ENSMUST00000123068.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141982939_T/G chr4:141982939 G ENSMUSG00000051435.11 ENSMUST00000105779.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141982939_T/G chr4:141982939 G ENSMUSG00000051435.11 ENSMUST00000105780.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141982939_T/G chr4:141982939 G ENSMUSG00000051435.11 ENSMUST00000123068.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_141982939_T/G chr4:141982939 G ENSMUSG00000085424.1 ENSMUST00000146094.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=53;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_142379683_TT/- chr4:142379683-142379684 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_142949072_-/GTGT chr4:142949071-142949072 GTGT ENSMUSG00000110067.1 ENSMUST00000211105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_143044849_AGAT/- chr4:143044849-143044852 - ENSMUSG00000110067.1 ENSMUST00000211105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_143087887_TGTG/- chr4:143087887-143087890 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_143289813_TCTC/- chr4:143289813-143289816 - ENSMUSG00000028583.14 ENSMUST00000030317.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_143289813_TCTC/- chr4:143289813-143289816 - ENSMUSG00000028583.14 ENSMUST00000119654.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_144946374_ACAC/-/AC chr4:144946374-144946377 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_144946374_ACAC/-/AC chr4:144946374-144946377 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_145122071_A/- chr4:145122071 - ENSMUSG00000020220.16 ENSMUST00000020441.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145122071_A/- chr4:145122071 - ENSMUSG00000020220.16 ENSMUST00000036579.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145122071_A/- chr4:145122071 - ENSMUSG00000020220.16 ENSMUST00000185113.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145345787_C/T chr4:145345787 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_145455022_G/T chr4:145455022 T ENSMUSG00000083081.1 ENSMUST00000118609.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=611;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145455022_G/T chr4:145455022 T ENSMUSG00000082082.1 ENSMUST00000120870.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4134;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145585309_G/C chr4:145585309 C ENSMUSG00000078502.10 ENSMUST00000105739.7 Transcript 5_prime_UTR_variant 144 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145585309_G/C chr4:145585309 C ENSMUSG00000078502.10 ENSMUST00000119718.7 Transcript 5_prime_UTR_variant 107 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145630895_T/C chr4:145630895 C ENSMUSG00000083562.1 ENSMUST00000120010.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1609;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145630895_T/C chr4:145630895 C ENSMUSG00000097661.1 ENSMUST00000180968.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145654040_C/T chr4:145654040 T ENSMUSG00000097661.1 ENSMUST00000180968.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145744216_A/C chr4:145744216 C ENSMUSG00000082334.1 ENSMUST00000118855.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1530;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145744232_C/T chr4:145744232 T ENSMUSG00000082334.1 ENSMUST00000118855.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1514;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145826265_T/C chr4:145826265 C ENSMUSG00000084350.1 ENSMUST00000122051.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145840324_G/A chr4:145840324 A ENSMUSG00000096233.1 ENSMUST00000117655.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2326;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_145840324_G/A chr4:145840324 A ENSMUSG00000083235.1 ENSMUST00000120994.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4080;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146064913_A/C chr4:146064913 C ENSMUSG00000082195.3 ENSMUST00000121342.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2839;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146077880_T/C chr4:146077880 C ENSMUSG00000083733.3 ENSMUST00000117496.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4282;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146176859_CC/TT chr4:146176859-146176860 TT ENSMUSG00000066007.15 ENSMUST00000092750.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146176859_CC/TT chr4:146176859-146176860 TT ENSMUSG00000081522.1 ENSMUST00000119716.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1264;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146176859_CC/TT chr4:146176859-146176860 TT ENSMUSG00000066007.15 ENSMUST00000131932.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146176859_CC/TT chr4:146176859-146176860 TT ENSMUSG00000086654.1 ENSMUST00000152923.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146176859_CC/TT chr4:146176859-146176860 TT ENSMUSG00000086654.1 ENSMUST00000153595.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146176859_CC/TT chr4:146176859-146176860 TT ENSMUSG00000066007.15 ENSMUST00000168483.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146176859_CC/TT chr4:146176859-146176860 TT ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146180871_ATATATATATATATATATATATAC/- chr4:146180871-146180894 - ENSMUSG00000066007.15 ENSMUST00000092750.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146180871_ATATATATATATATATATATATAC/- chr4:146180871-146180894 - ENSMUSG00000081522.1 ENSMUST00000119716.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2105;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146180871_ATATATATATATATATATATATAC/- chr4:146180871-146180894 - ENSMUSG00000066007.15 ENSMUST00000131932.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146180871_ATATATATATATATATATATATAC/- chr4:146180871-146180894 - ENSMUSG00000086654.1 ENSMUST00000152923.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146180871_ATATATATATATATATATATATAC/- chr4:146180871-146180894 - ENSMUSG00000086654.1 ENSMUST00000153595.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146180871_ATATATATATATATATATATATAC/- chr4:146180871-146180894 - ENSMUSG00000066007.15 ENSMUST00000168483.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146180871_ATATATATATATATATATATATAC/- chr4:146180871-146180894 - ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146244453_G/A chr4:146244453 A ENSMUSG00000084127.1 ENSMUST00000122090.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2820;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146244453_G/A chr4:146244453 A ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146262842_-/TTT chr4:146262841-146262842 TTT ENSMUSG00000081460.1 ENSMUST00000121771.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=717;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146262842_-/TTT chr4:146262841-146262842 TTT ENSMUSG00000085525.7 ENSMUST00000154592.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146262842_-/TTT chr4:146262841-146262842 TTT ENSMUSG00000095096.1 ENSMUST00000178733.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1679;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146262842_-/TTT chr4:146262841-146262842 TTT ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146263991_G/A chr4:146263991 A ENSMUSG00000081460.1 ENSMUST00000121771.1 Transcript non_coding_transcript_exon_variant 433 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146263991_G/A chr4:146263991 A ENSMUSG00000085525.7 ENSMUST00000154592.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146263991_G/A chr4:146263991 A ENSMUSG00000095096.1 ENSMUST00000178733.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=530;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146263991_G/A chr4:146263991 A ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146499813_T/G chr4:146499813 G ENSMUSG00000056300.14 ENSMUST00000105735.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2214;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146499813_T/G chr4:146499813 G ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146509624_T/C chr4:146509624 C ENSMUSG00000056300.14 ENSMUST00000105735.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146509624_T/C chr4:146509624 C ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146509624_T/C chr4:146509624 C ENSMUSG00000096979.1 ENSMUST00000181610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146546051_CACA/- chr4:146546051-146546054 - ENSMUSG00000086046.1 ENSMUST00000145269.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146546051_CACA/- chr4:146546051-146546054 - ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146910780_GG/CA chr4:146910780-146910781 CA ENSMUSG00000045699.3 ENSMUST00000049821.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1190;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146910780_GG/CA chr4:146910780-146910781 CA ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146928259_CT/TA chr4:146928259-146928260 TA ENSMUSG00000093919.1 ENSMUST00000179197.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4482;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146928259_CT/TA chr4:146928259-146928260 TA ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146928267_C/G chr4:146928267 G ENSMUSG00000093919.1 ENSMUST00000179197.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4475;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_146928267_C/G chr4:146928267 G ENSMUSG00000096958.1 ENSMUST00000181199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147079754_T/G chr4:147079754 G ENSMUSG00000097168.1 ENSMUST00000181084.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147079754_T/G chr4:147079754 G ENSMUSG00000097168.1 ENSMUST00000181752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147083184_G/A chr4:147083184 A ENSMUSG00000094017.1 ENSMUST00000118441.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3174;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147083184_G/A chr4:147083184 A ENSMUSG00000097168.1 ENSMUST00000181084.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147083184_G/A chr4:147083184 A ENSMUSG00000097168.1 ENSMUST00000181752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147187597_G/A chr4:147187597 A ENSMUSG00000095054.1 ENSMUST00000118508.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=111;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147187597_G/A chr4:147187597 A ENSMUSG00000097168.1 ENSMUST00000181084.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147187597_G/A chr4:147187597 A ENSMUSG00000097122.1 ENSMUST00000181486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147187597_G/A chr4:147187597 A ENSMUSG00000097168.1 ENSMUST00000181752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147410622_A/C chr4:147410622 C ENSMUSG00000097122.1 ENSMUST00000181486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147410622_A/C chr4:147410622 C ENSMUSG00000097168.1 ENSMUST00000181752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147443091_C/T chr4:147443091 T ENSMUSG00000082248.1 ENSMUST00000120609.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=380;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147443091_C/T chr4:147443091 T ENSMUSG00000093975.1 ENSMUST00000179720.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1289;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147443091_C/T chr4:147443091 T ENSMUSG00000097122.1 ENSMUST00000181486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147443091_C/T chr4:147443091 T ENSMUSG00000097168.1 ENSMUST00000181752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147554052_C/T chr4:147554052 T ENSMUSG00000065999.13 ENSMUST00000081742.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147554052_C/T chr4:147554052 T ENSMUSG00000065999.13 ENSMUST00000139784.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147554052_C/T chr4:147554052 T ENSMUSG00000065999.13 ENSMUST00000143885.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147606259_C/T chr4:147606259 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_147737733_T/C chr4:147737733 C ENSMUSG00000096521.1 ENSMUST00000118035.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4601;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_147737733_T/C chr4:147737733 C ENSMUSG00000081179.1 ENSMUST00000121031.1 Transcript non_coding_transcript_exon_variant 694 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_148971484_-/CCCCCCCCCCCC chr4:148971483-148971484 CCCCCCCCCCCC ENSMUSG00000028975.16 ENSMUST00000103217.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_148971484_-/CCCCCCCCCCCC chr4:148971483-148971484 CCCCCCCCCCCC ENSMUSG00000028975.16 ENSMUST00000128067.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_148971484_-/CCCCCCCCCCCC chr4:148971483-148971484 CCCCCCCCCCCC ENSMUSG00000086740.1 ENSMUST00000145143.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_148971484_-/CCCCCCCCCCCC chr4:148971483-148971484 CCCCCCCCCCCC ENSMUSG00000086740.1 ENSMUST00000146124.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_148971484_-/CCCCCCCCCCCC chr4:148971483-148971484 CCCCCCCCCCCC ENSMUSG00000086740.1 ENSMUST00000153443.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4485;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149229232_GTGT/-/GT chr4:149229232-149229235 - ENSMUSG00000063077.14 ENSMUST00000030806.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149229232_GTGT/-/GT chr4:149229232-149229235 GT ENSMUSG00000063077.14 ENSMUST00000030806.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149229232_GTGT/-/GT chr4:149229232-149229235 - ENSMUSG00000063077.14 ENSMUST00000055647.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149229232_GTGT/-/GT chr4:149229232-149229235 GT ENSMUSG00000063077.14 ENSMUST00000055647.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149229232_GTGT/-/GT chr4:149229232-149229235 - ENSMUSG00000063077.14 ENSMUST00000060537.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149229232_GTGT/-/GT chr4:149229232-149229235 GT ENSMUSG00000063077.14 ENSMUST00000060537.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149280256_T/- chr4:149280256 - ENSMUSG00000063077.14 ENSMUST00000030806.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149280256_T/- chr4:149280256 - ENSMUSG00000063077.14 ENSMUST00000055647.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149280256_T/- chr4:149280256 - ENSMUSG00000063077.14 ENSMUST00000060537.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149280256_T/- chr4:149280256 - ENSMUSG00000063077.14 ENSMUST00000150230.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149312395_A/G chr4:149312395 G ENSMUSG00000063077.14 ENSMUST00000030806.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4772;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149312395_A/G chr4:149312395 G ENSMUSG00000063077.14 ENSMUST00000055647.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149312395_A/G chr4:149312395 G ENSMUSG00000063077.14 ENSMUST00000060537.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4703;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149312395_A/G chr4:149312395 G ENSMUSG00000063077.14 ENSMUST00000132072.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4731;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149312395_A/G chr4:149312395 G ENSMUSG00000063077.14 ENSMUST00000150230.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4702;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149381652_G/A chr4:149381652 A ENSMUSG00000028960.18 ENSMUST00000084123.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149381652_G/A chr4:149381652 A ENSMUSG00000028960.18 ENSMUST00000103212.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149381652_G/A chr4:149381652 A ENSMUSG00000028960.18 ENSMUST00000172643.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3474;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149381652_G/A chr4:149381652 A ENSMUSG00000028960.18 ENSMUST00000172836.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149381652_G/A chr4:149381652 A ENSMUSG00000028960.18 ENSMUST00000174343.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149990171_CTCT/-/CTCTCT chr4:149990171-149990174 - ENSMUSG00000028980.14 ENSMUST00000030830.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149990171_CTCT/-/CTCTCT chr4:149990171-149990174 CTCTCT ENSMUSG00000028980.14 ENSMUST00000030830.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149990171_CTCT/-/CTCTCT chr4:149990171-149990174 - ENSMUSG00000028980.14 ENSMUST00000084117.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_149990171_CTCT/-/CTCTCT chr4:149990171-149990174 CTCTCT ENSMUSG00000028980.14 ENSMUST00000084117.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_150217234_TGTG/- chr4:150217234-150217237 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_150590199_T/A chr4:150590199 A ENSMUSG00000039852.17 ENSMUST00000105680.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_150590199_T/A chr4:150590199 A ENSMUSG00000039852.17 ENSMUST00000105682.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_150590199_T/A chr4:150590199 A ENSMUSG00000039852.17 ENSMUST00000137112.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_150798824_TT/- chr4:150798824-150798825 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_151308616_G/T chr4:151308616 T ENSMUSG00000014592.20 ENSMUST00000049790.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151308616_G/T chr4:151308616 T ENSMUSG00000014592.20 ENSMUST00000097774.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151308616_G/T chr4:151308616 T ENSMUSG00000014592.20 ENSMUST00000169423.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 - ENSMUSG00000014592.20 ENSMUST00000049790.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 AC ENSMUSG00000014592.20 ENSMUST00000049790.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 - ENSMUSG00000014592.20 ENSMUST00000097774.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 AC ENSMUSG00000014592.20 ENSMUST00000097774.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 - ENSMUSG00000014592.20 ENSMUST00000155685.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 AC ENSMUSG00000014592.20 ENSMUST00000155685.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 - ENSMUSG00000014592.20 ENSMUST00000169423.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_151682468_ACAC/-/AC chr4:151682468-151682471 AC ENSMUSG00000014592.20 ENSMUST00000169423.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 - ENSMUSG00000039577.17 ENSMUST00000056567.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 AC ENSMUSG00000039577.17 ENSMUST00000056567.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 - ENSMUSG00000039577.17 ENSMUST00000081393.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 AC ENSMUSG00000039577.17 ENSMUST00000081393.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 - ENSMUSG00000039577.17 ENSMUST00000142027.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 AC ENSMUSG00000039577.17 ENSMUST00000142027.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 - ENSMUSG00000039577.17 ENSMUST00000146223.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 AC ENSMUSG00000039577.17 ENSMUST00000146223.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 - ENSMUSG00000039577.17 ENSMUST00000153759.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1468;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152491913_ACAC/-/AC chr4:152491913-152491916 AC ENSMUSG00000039577.17 ENSMUST00000153759.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1468;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_152618842_A/T chr4:152618842 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_152618849_CAAACACTGCAGCT/- chr4:152618849-152618862 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_152827189_GAGA/- chr4:152827189-152827192 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000030902.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000070313.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000097759.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000105636.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000105637.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000105638.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000124771.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000141164.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154590949_G/A chr4:154590949 A ENSMUSG00000039410.16 ENSMUST00000149605.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000030902.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000070313.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000097759.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000105636.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000105637.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000105638.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000124771.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000085069.2 ENSMUST00000136217.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4358;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000141164.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154633218_-/AC chr4:154633217-154633218 AC ENSMUSG00000039410.16 ENSMUST00000149605.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154671470_G/A chr4:154671470 A ENSMUSG00000051276.4 ENSMUST00000060062.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3603;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_154681194_C/T chr4:154681194 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_155981365_TT/-/T chr4:155981365-155981366 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_155981365_TT/-/T chr4:155981365-155981366 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_155984681_GGAGGAGCATGGTGATATATAGGCAGACATGAGGAGGGCATGGTGATATATAGGCAGACATGA/- chr4:155984681-155984743 - ENSMUSG00000050796.4 ENSMUST00000052185.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4723;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156002256_TT/- chr4:156002256-156002257 - ENSMUSG00000029076.14 ENSMUST00000050078.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156002256_TT/- chr4:156002256-156002257 - ENSMUSG00000029076.14 ENSMUST00000097734.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156002256_TT/- chr4:156002256-156002257 - ENSMUSG00000029076.14 ENSMUST00000105578.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156002256_TT/- chr4:156002256-156002257 - ENSMUSG00000029076.14 ENSMUST00000105579.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156002256_TT/- chr4:156002256-156002257 - ENSMUSG00000029076.14 ENSMUST00000124872.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1271;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156150457_AA/-/AAA chr4:156150457-156150458 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_156150457_AA/-/AAA chr4:156150457-156150458 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr4_156339967_G/T chr4:156339967 T ENSMUSG00000057021.13 ENSMUST00000074107.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=468;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156339967_G/T chr4:156339967 T ENSMUSG00000057021.13 ENSMUST00000096792.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=471;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr4_156339967_G/T chr4:156339967 T ENSMUSG00000057021.13 ENSMUST00000189559.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=471;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_3365680_GTGTGT/- chr5:3365680-3365685 - ENSMUSG00000040274.11 ENSMUST00000042410.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_3365680_GTGTGT/- chr5:3365680-3365685 - ENSMUSG00000040274.11 ENSMUST00000165117.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_3365680_GTGTGT/- chr5:3365680-3365685 - ENSMUSG00000040274.11 ENSMUST00000197385.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_3444811_-/ACAC chr5:3444810-3444811 ACAC ENSMUSG00000040274.11 ENSMUST00000042410.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_3444811_-/ACAC chr5:3444810-3444811 ACAC ENSMUSG00000040274.11 ENSMUST00000165117.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_4208547_G/A chr5:4208547 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_4492032_GTGT/- chr5:4492032-4492035 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_4538418_CCTCCCCTCCCCTCCCCTCCCCTCCCCTCC/- chr5:4538418-4538447 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_4589707_CACA/- chr5:4589707-4589710 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_4905359_G/A chr5:4905359 A ENSMUSG00000028926.15 ENSMUST00000030763.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_4905359_G/A chr5:4905359 A ENSMUSG00000028926.15 ENSMUST00000115450.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_4905359_G/A chr5:4905359 A ENSMUSG00000028926.15 ENSMUST00000115451.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_4905359_G/A chr5:4905359 A ENSMUSG00000028926.15 ENSMUST00000115452.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_6177429_-/TTTTTTTTTT chr5:6177428-6177429 TTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_6414878_A/T chr5:6414878 T ENSMUSG00000088380.1 ENSMUST00000157755.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4348;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_6414878_A/T chr5:6414878 T ENSMUSG00000106064.1 ENSMUST00000197468.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_6736041_C/T chr5:6736041 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_6940781_ACAC/- chr5:6940781-6940784 - ENSMUSG00000092094.5 ENSMUST00000200317.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_7340173_ATATATATAT/- chr5:7340173-7340182 - ENSMUSG00000092094.5 ENSMUST00000200317.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8020392_C/A chr5:8020392 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_8020406_T/C chr5:8020406 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000046838.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000050166.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000088744.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000088761.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000115385.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000115386.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000115388.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8353488_-/AAAAAAAAA chr5:8353487-8353488 AAAAAAAAA ENSMUSG00000040537.17 ENSMUST00000138652.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8428861_A/T chr5:8428861 T ENSMUSG00000054099.11 ENSMUST00000066921.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8428861_A/T chr5:8428861 T ENSMUSG00000054099.11 ENSMUST00000170496.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8428861_A/T chr5:8428861 T ENSMUSG00000054099.11 ENSMUST00000196727.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8428861_A/T chr5:8428861 T ENSMUSG00000054099.11 ENSMUST00000197006.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8428861_A/T chr5:8428861 T ENSMUSG00000054099.11 ENSMUST00000198792.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8428861_A/T chr5:8428861 T ENSMUSG00000054099.11 ENSMUST00000199532.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1265;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8428861_A/T chr5:8428861 T ENSMUSG00000054099.11 ENSMUST00000199817.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=227;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8813414_ATAT/- chr5:8813414-8813417 - ENSMUSG00000028970.9 ENSMUST00000009058.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8813414_ATAT/- chr5:8813414-8813417 - ENSMUSG00000028970.9 ENSMUST00000196580.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_8813414_ATAT/- chr5:8813414-8813417 - ENSMUSG00000028970.9 ENSMUST00000199955.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9295105_TTT/- chr5:9295105-9295107 - ENSMUSG00000056004.16 ENSMUST00000069538.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9295105_TTT/- chr5:9295105-9295107 - ENSMUSG00000056004.16 ENSMUST00000115348.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9295105_TTT/- chr5:9295105-9295107 - ENSMUSG00000056004.16 ENSMUST00000131626.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9295105_TTT/- chr5:9295105-9295107 - ENSMUSG00000056004.16 ENSMUST00000134991.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9295105_TTT/- chr5:9295105-9295107 - ENSMUSG00000056004.16 ENSMUST00000152095.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9295105_TTT/- chr5:9295105-9295107 - ENSMUSG00000056004.16 ENSMUST00000154662.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9295105_TTT/- chr5:9295105-9295107 - ENSMUSG00000056004.16 ENSMUST00000155764.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9625400_CACA/- chr5:9625400-9625403 - ENSMUSG00000003974.6 ENSMUST00000004076.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_9888143_-/TT chr5:9888142-9888143 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_10104346_TCTT/- chr5:10104346-10104349 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_10314252_TTTAT/- chr5:10314252-10314256 - ENSMUSG00000105157.1 ENSMUST00000196240.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_10314252_TTTAT/- chr5:10314252-10314256 - ENSMUSG00000105157.1 ENSMUST00000198581.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_10513312_TCTCCCCCTCTCTCCCCCTCTCTCTCCCCCTCTCTCTTCCTCTCTCTCCCCTCTTCCCTTCTCCCCCCCTCTCCCCCTTCCCCCCTCTCCTCCTCTCCCCCTCTCCCTTTGCTCCCTCTCCCCTCTCCCTCTCCTTCTCCCTCTCCCTCTCCCTCTCCACCTCTCCCCT/- chr5:10513312-10513480 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_10874014_CTCTCTCTCTCT/- chr5:10874014-10874025 - ENSMUSG00000091422.8 ENSMUST00000095015.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3206;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_10874014_CTCTCTCTCTCT/- chr5:10874014-10874025 - ENSMUSG00000091422.8 ENSMUST00000168057.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3207;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_10874014_CTCTCTCTCTCT/- chr5:10874014-10874025 - ENSMUSG00000104942.1 ENSMUST00000200603.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1596;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11136469_A/C chr5:11136469 C ENSMUSG00000094025.7 ENSMUST00000170260.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3982;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11136469_A/C chr5:11136469 C ENSMUSG00000105705.1 ENSMUST00000199415.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=810;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11191005_CTCT/-/CT chr5:11191005-11191008 - ENSMUSG00000095918.7 ENSMUST00000168407.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3197;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11191005_CTCT/-/CT chr5:11191005-11191008 CT ENSMUSG00000095918.7 ENSMUST00000168407.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3197;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11191005_CTCT/-/CT chr5:11191005-11191008 - ENSMUSG00000095918.7 ENSMUST00000171093.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3195;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11191005_CTCT/-/CT chr5:11191005-11191008 CT ENSMUSG00000095918.7 ENSMUST00000171093.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3195;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11191005_CTCT/-/CT chr5:11191005-11191008 - ENSMUSG00000105705.1 ENSMUST00000199415.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11191005_CTCT/-/CT chr5:11191005-11191008 CT ENSMUSG00000105705.1 ENSMUST00000199415.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11458464_C/A chr5:11458464 A ENSMUSG00000105549.1 ENSMUST00000196320.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1960;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_11628860_T/C chr5:11628860 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_11986462_G/- chr5:11986462 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_12353861_C/G chr5:12353861 G ENSMUSG00000104941.1 ENSMUST00000198497.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=836;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_12925689_TCTC/- chr5:12925689-12925692 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_13607612_CACACA/- chr5:13607612-13607617 - ENSMUSG00000105366.1 ENSMUST00000200088.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1379;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_13737991_A/T chr5:13737991 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_14145975_ATAT/- chr5:14145975-14145978 - ENSMUSG00000063531.7 ENSMUST00000073957.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_14145975_ATAT/- chr5:14145975-14145978 - ENSMUSG00000063531.7 ENSMUST00000130116.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_14415962_-/AAAG chr5:14415961-14415962 AAAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_14899913_T/C chr5:14899913 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_14928529_T/C chr5:14928529 C ENSMUSG00000091255.1 ENSMUST00000159973.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4692;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_14951362_T/C chr5:14951362 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_14954641_T/G chr5:14954641 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_14977907_A/G chr5:14977907 G ENSMUSG00000072188.4 ENSMUST00000096953.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15469932_G/T chr5:15469932 T ENSMUSG00000106004.4 ENSMUST00000196145.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15469932_G/T chr5:15469932 T ENSMUSG00000106004.4 ENSMUST00000197796.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=407;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15469932_G/T chr5:15469932 T ENSMUSG00000099762.3 ENSMUST00000197995.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1771;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15469932_G/T chr5:15469932 T ENSMUSG00000106004.4 ENSMUST00000198110.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3093;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15554771_A/G chr5:15554771 G ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15554771_A/G chr5:15554771 G ENSMUSG00000105300.1 ENSMUST00000197277.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15554774_A/G chr5:15554774 G ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15554774_A/G chr5:15554774 G ENSMUSG00000105300.1 ENSMUST00000197277.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15587433_A/G chr5:15587433 G ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15587433_A/G chr5:15587433 G ENSMUSG00000105300.1 ENSMUST00000197277.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15591109_T/A chr5:15591109 A ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15591109_T/A chr5:15591109 A ENSMUSG00000105300.1 ENSMUST00000197277.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15604538_C/A chr5:15604538 A ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15604538_C/A chr5:15604538 A ENSMUSG00000105300.1 ENSMUST00000197277.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15610791_T/A chr5:15610791 A ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15610804_T/C chr5:15610804 C ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15632818_A/C chr5:15632818 C ENSMUSG00000094230.5 ENSMUST00000178227.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15707911_TCTCTC/-/TCTC chr5:15707911-15707916 - ENSMUSG00000073208.12 ENSMUST00000095005.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15707911_TCTCTC/-/TCTC chr5:15707911-15707916 TCTC ENSMUSG00000073208.12 ENSMUST00000095005.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15707911_TCTCTC/-/TCTC chr5:15707911-15707916 - ENSMUSG00000089871.1 ENSMUST00000162113.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15707911_TCTCTC/-/TCTC chr5:15707911-15707916 TCTC ENSMUSG00000089871.1 ENSMUST00000162113.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15707911_TCTCTC/-/TCTC chr5:15707911-15707916 - ENSMUSG00000073208.12 ENSMUST00000179506.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3641;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_15707911_TCTCTC/-/TCTC chr5:15707911-15707916 TCTC ENSMUSG00000073208.12 ENSMUST00000179506.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3641;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000039370.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000078272.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000101581.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000115281.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000167946.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000180204.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000199704.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16129243_ACAC/- chr5:16129243-16129246 - ENSMUSG00000040118.15 ENSMUST00000200270.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000039370.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000078272.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000101581.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000115281.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000167946.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000180204.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000199704.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16146207_-/TTCTC chr5:16146206-16146207 TTCTC ENSMUSG00000040118.15 ENSMUST00000200270.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_16816043_TATC/- chr5:16816043-16816046 - ENSMUSG00000109903.1 ENSMUST00000211738.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_17942749_TC/T/CC chr5:17942749-17942750 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_17942749_TC/T/CC chr5:17942749-17942750 CC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_18254227_TC/- chr5:18254227-18254228 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_19527395_CC/- chr5:19527395-19527396 - ENSMUSG00000040003.18 ENSMUST00000088516.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19527395_CC/- chr5:19527395-19527396 - ENSMUSG00000040003.18 ENSMUST00000197354.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19527395_CC/- chr5:19527395-19527396 - ENSMUSG00000040003.18 ENSMUST00000197443.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19527395_CC/- chr5:19527395-19527396 - ENSMUSG00000040003.18 ENSMUST00000200518.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19995397_C/T chr5:19995397 T ENSMUSG00000040003.18 ENSMUST00000088516.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19995397_C/T chr5:19995397 T ENSMUSG00000040003.18 ENSMUST00000101558.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19995397_C/T chr5:19995397 T ENSMUSG00000040003.18 ENSMUST00000115267.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19995397_C/T chr5:19995397 T ENSMUSG00000040003.18 ENSMUST00000197354.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19995397_C/T chr5:19995397 T ENSMUSG00000040003.18 ENSMUST00000197443.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_19995397_C/T chr5:19995397 T ENSMUSG00000040003.18 ENSMUST00000200443.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20149302_C/T chr5:20149302 T ENSMUSG00000040003.18 ENSMUST00000088516.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20149302_C/T chr5:20149302 T ENSMUSG00000040003.18 ENSMUST00000101558.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20149302_C/T chr5:20149302 T ENSMUSG00000040003.18 ENSMUST00000115267.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20149302_C/T chr5:20149302 T ENSMUSG00000040003.18 ENSMUST00000197354.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20149302_C/T chr5:20149302 T ENSMUSG00000040003.18 ENSMUST00000197443.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20149302_C/T chr5:20149302 T ENSMUSG00000040003.18 ENSMUST00000200443.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20156046_T/- chr5:20156046 - ENSMUSG00000040003.18 ENSMUST00000088516.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20156046_T/- chr5:20156046 - ENSMUSG00000040003.18 ENSMUST00000101558.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20156046_T/- chr5:20156046 - ENSMUSG00000040003.18 ENSMUST00000115267.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20156046_T/- chr5:20156046 - ENSMUSG00000040003.18 ENSMUST00000197354.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20156046_T/- chr5:20156046 - ENSMUSG00000040003.18 ENSMUST00000197443.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20156046_T/- chr5:20156046 - ENSMUSG00000040003.18 ENSMUST00000200443.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 - ENSMUSG00000039987.15 ENSMUST00000118174.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 AC ENSMUSG00000039987.15 ENSMUST00000118174.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 - ENSMUSG00000039987.15 ENSMUST00000133784.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 AC ENSMUSG00000039987.15 ENSMUST00000133784.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 - ENSMUSG00000039987.15 ENSMUST00000139325.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 AC ENSMUSG00000039987.15 ENSMUST00000139325.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 - ENSMUSG00000039987.15 ENSMUST00000140147.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 AC ENSMUSG00000039987.15 ENSMUST00000140147.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 - ENSMUSG00000039987.15 ENSMUST00000156044.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20839267_ACAC/-/AC chr5:20839267-20839270 AC ENSMUSG00000039987.15 ENSMUST00000156044.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20959476_G/A chr5:20959476 A ENSMUSG00000101013.1 ENSMUST00000190567.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3078;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_20959476_G/A chr5:20959476 A ENSMUSG00000039968.9 ENSMUST00000196780.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3078;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_22214431_G/A chr5:22214431 A ENSMUSG00000042453.14 ENSMUST00000062372.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_22214431_G/A chr5:22214431 A ENSMUSG00000042453.14 ENSMUST00000161356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_22214431_G/A chr5:22214431 A ENSMUSG00000042453.14 ENSMUST00000162427.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_22214431_G/A chr5:22214431 A ENSMUSG00000042453.14 ENSMUST00000162622.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_22214431_G/A chr5:22214431 A ENSMUSG00000042453.14 ENSMUST00000162637.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23366044_G/C chr5:23366044 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_23367529_G/T chr5:23367529 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_23447065_TGTG/- chr5:23447065-23447068 - ENSMUSG00000029004.15 ENSMUST00000094962.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23447065_TGTG/- chr5:23447065-23447068 - ENSMUSG00000029004.15 ENSMUST00000115128.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23447065_TGTG/- chr5:23447065-23447068 - ENSMUSG00000029004.15 ENSMUST00000196889.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23628904_AGAG/- chr5:23628904-23628907 - ENSMUSG00000062604.11 ENSMUST00000196388.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23628904_AGAG/- chr5:23628904-23628907 - ENSMUSG00000062604.11 ENSMUST00000196929.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23628904_AGAG/- chr5:23628904-23628907 - ENSMUSG00000062604.11 ENSMUST00000197622.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23628904_AGAG/- chr5:23628904-23628907 - ENSMUSG00000062604.11 ENSMUST00000197985.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23628904_AGAG/- chr5:23628904-23628907 - ENSMUSG00000062604.11 ENSMUST00000198549.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_23628904_AGAG/- chr5:23628904-23628907 - ENSMUSG00000062604.11 ENSMUST00000198661.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24185911_TTTTTT/-/TTT chr5:24185911-24185916 - ENSMUSG00000048439.15 ENSMUST00000049887.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1898;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24185911_TTTTTT/-/TTT chr5:24185911-24185916 TTT ENSMUSG00000048439.15 ENSMUST00000049887.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1898;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24185911_TTTTTT/-/TTT chr5:24185911-24185916 - ENSMUSG00000048439.15 ENSMUST00000115101.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3074;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24185911_TTTTTT/-/TTT chr5:24185911-24185916 TTT ENSMUSG00000048439.15 ENSMUST00000115101.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3074;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24185911_TTTTTT/-/TTT chr5:24185911-24185916 - ENSMUSG00000048439.15 ENSMUST00000124150.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4479;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24185911_TTTTTT/-/TTT chr5:24185911-24185916 TTT ENSMUSG00000048439.15 ENSMUST00000124150.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4479;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24399586_T/A chr5:24399586 A ENSMUSG00000028973.18 ENSMUST00000073076.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24399586_T/A chr5:24399586 A ENSMUSG00000028973.18 ENSMUST00000115074.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24399586_T/A chr5:24399586 A ENSMUSG00000028973.18 ENSMUST00000115077.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24399586_T/A chr5:24399586 A ENSMUSG00000028973.18 ENSMUST00000127816.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2668;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24399586_T/A chr5:24399586 A ENSMUSG00000028973.18 ENSMUST00000136414.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24399586_T/A chr5:24399586 A ENSMUSG00000028973.18 ENSMUST00000138168.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24399586_T/A chr5:24399586 A ENSMUSG00000028973.18 ENSMUST00000198166.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1012;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24934404_-/TATC chr5:24934403-24934404 TATC ENSMUSG00000028944.14 ENSMUST00000030784.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_24934404_-/TATC chr5:24934403-24934404 TATC ENSMUSG00000028944.14 ENSMUST00000076306.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25365081_-/AATA chr5:25365080-25365081 AATA ENSMUSG00000038056.15 ENSMUST00000045291.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25365081_-/AATA chr5:25365080-25365081 AATA ENSMUSG00000038056.15 ENSMUST00000173073.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25365081_-/AATA chr5:25365080-25365081 AATA ENSMUSG00000106457.1 ENSMUST00000198731.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3939;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25501274_AA/- chr5:25501274-25501275 - ENSMUSG00000038056.15 ENSMUST00000045291.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2529;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25501274_AA/- chr5:25501274-25501275 - ENSMUSG00000038056.15 ENSMUST00000172626.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2491;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25501274_AA/- chr5:25501274-25501275 - ENSMUSG00000038056.15 ENSMUST00000173073.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2572;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25501274_AA/- chr5:25501274-25501275 - ENSMUSG00000038056.15 ENSMUST00000173174.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2519;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_25501274_AA/- chr5:25501274-25501275 - ENSMUSG00000097236.1 ENSMUST00000181942.1 Transcript non_coding_transcript_exon_variant 761-762 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_26019249_C/T chr5:26019249 T ENSMUSG00000067700.5 ENSMUST00000072286.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_26100242_G/T chr5:26100242 T ENSMUSG00000051940.2 ENSMUST00000063524.2 Transcript 3_prime_UTR_variant 1421 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_26138272_TT/-/T chr5:26138272-26138273 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_26138272_TT/-/T chr5:26138272-26138273 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_26270319_T/G chr5:26270319 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_26528794_-/C chr5:26528793-26528794 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_27067325_GTGTGT/- chr5:27067325-27067330 - ENSMUSG00000061576.15 ENSMUST00000071500.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_27067325_GTGTGT/- chr5:27067325-27067330 - ENSMUSG00000061576.15 ENSMUST00000120555.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_27067325_GTGTGT/- chr5:27067325-27067330 - ENSMUSG00000061576.15 ENSMUST00000122171.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_27067325_GTGTGT/- chr5:27067325-27067330 - ENSMUSG00000061576.15 ENSMUST00000136574.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_27720917_A/- chr5:27720917 - ENSMUSG00000061576.15 ENSMUST00000071500.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_27720917_A/- chr5:27720917 - ENSMUSG00000061576.15 ENSMUST00000101471.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_27720917_A/- chr5:27720917 - ENSMUSG00000061576.15 ENSMUST00000120555.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_27720917_A/- chr5:27720917 - ENSMUSG00000061576.15 ENSMUST00000122171.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_29451607_AAA/- chr5:29451607-29451609 - ENSMUSG00000001569.10 ENSMUST00000001611.10 Transcript 3_prime_UTR_variant 2983-2985 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_29497925_GTGT/- chr5:29497925-29497928 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_29563727_-/AAAC chr5:29563726-29563727 AAAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_30045326_G/A chr5:30045326 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_30658445_GGG/- chr5:30658445-30658447 - ENSMUSG00000029175.17 ENSMUST00000062962.11 Transcript 3_prime_UTR_variant 1804-1806 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_30658445_GGG/- chr5:30658445-30658447 - ENSMUSG00000029175.17 ENSMUST00000124474.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=254;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_30658445_GGG/- chr5:30658445-30658447 - ENSMUSG00000029175.17 ENSMUST00000131978.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2345;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_30658445_GGG/- chr5:30658445-30658447 - ENSMUSG00000029175.17 ENSMUST00000143867.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=254;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_30658445_GGG/- chr5:30658445-30658447 - ENSMUSG00000029175.17 ENSMUST00000196740.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=201;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_30658445_GGG/- chr5:30658445-30658447 - ENSMUSG00000029175.17 ENSMUST00000199052.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=643;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000013622.15 ENSMUST00000013766.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2834;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000006641.12 ENSMUST00000080431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000006641.12 ENSMUST00000114668.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000013622.15 ENSMUST00000200748.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2921;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000006641.12 ENSMUST00000200816.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000013622.15 ENSMUST00000200942.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2858;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000013622.15 ENSMUST00000201136.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2984;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000013622.15 ENSMUST00000201174.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2511;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000013622.15 ENSMUST00000201773.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2847;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000013622.15 ENSMUST00000201887.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2520;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000006641.12 ENSMUST00000202520.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000006641.12 ENSMUST00000202556.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31045799_AAA/- chr5:31045799-31045801 - ENSMUSG00000006641.12 ENSMUST00000202984.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3194;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000063813.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000071531.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000114507.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000114515.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000131995.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000200705.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000201107.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000201202.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000201352.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_31762591_GTGT/- chr5:31762591-31762594 - ENSMUSG00000052139.18 ENSMUST00000202293.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32513496_AA/- chr5:32513496-32513497 - ENSMUSG00000085234.1 ENSMUST00000155976.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32513496_AA/- chr5:32513496-32513497 - ENSMUSG00000014956.15 ENSMUST00000201360.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32610336_T/A chr5:32610336 A ENSMUSG00000014932.15 ENSMUST00000072311.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=848;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32610336_T/A chr5:32610336 A ENSMUSG00000085234.1 ENSMUST00000155976.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32610336_T/A chr5:32610336 A ENSMUSG00000014932.15 ENSMUST00000168707.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=999;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32610336_T/A chr5:32610336 A ENSMUSG00000014932.15 ENSMUST00000200779.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=862;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32610336_T/A chr5:32610336 A ENSMUSG00000107277.1 ENSMUST00000202073.1 Transcript non_coding_transcript_exon_variant 1470 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32610336_T/A chr5:32610336 A ENSMUSG00000014932.15 ENSMUST00000202543.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=835;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32821221_TGTG/-/TG chr5:32821221-32821224 - ENSMUSG00000054280.14 ENSMUST00000120129.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32821221_TGTG/-/TG chr5:32821221-32821224 TG ENSMUSG00000054280.14 ENSMUST00000120129.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32821221_TGTG/-/TG chr5:32821221-32821224 - ENSMUSG00000093574.1 ENSMUST00000144673.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32821221_TGTG/-/TG chr5:32821221-32821224 TG ENSMUSG00000093574.1 ENSMUST00000144673.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32821221_TGTG/-/TG chr5:32821221-32821224 - ENSMUSG00000054280.14 ENSMUST00000155392.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_32821221_TGTG/-/TG chr5:32821221-32821224 TG ENSMUSG00000054280.14 ENSMUST00000155392.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_33036948_TT/- chr5:33036948-33036949 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_34452733_TT/-/TTT chr5:34452733-34452734 - ENSMUSG00000037210.16 ENSMUST00000094867.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34452733_TT/-/TTT chr5:34452733-34452734 TTT ENSMUSG00000037210.16 ENSMUST00000094867.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34452733_TT/-/TTT chr5:34452733-34452734 - ENSMUSG00000037210.16 ENSMUST00000180376.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34452733_TT/-/TTT chr5:34452733-34452734 TTT ENSMUSG00000037210.16 ENSMUST00000180376.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34452733_TT/-/TTT chr5:34452733-34452734 - ENSMUSG00000037210.16 ENSMUST00000201005.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34452733_TT/-/TTT chr5:34452733-34452734 TTT ENSMUSG00000037210.16 ENSMUST00000201005.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000001108.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1765;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000001109.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000036693.12 ENSMUST00000041364.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4466;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000052836.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3254;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000114329.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000114331.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000114335.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1776;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000114338.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1762;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000114340.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1762;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000124668.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2524;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000126257.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1040;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000128670.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000130347.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000134156.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000136010.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000137150.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000137262.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3329;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000137506.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=994;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000137744.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1959;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000138212.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1543;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000148270.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000149657.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000151247.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1316;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000152805.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1762;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000155577.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=862;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000200717.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1018;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000201147.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=781;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000029106.14 ENSMUST00000201810.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3439;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000202065.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=561;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34634070_A/C chr5:34634070 C ENSMUSG00000001082.12 ENSMUST00000202378.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=244;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34724687_TT/- chr5:34724687-34724688 - ENSMUSG00000052783.16 ENSMUST00000001112.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_34724687_TT/- chr5:34724687-34724688 - ENSMUSG00000052783.16 ENSMUST00000153323.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_35094266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTTT chr5:35094265-35094266 TTTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000029103.16 ENSMUST00000030986.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_35094266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTTT chr5:35094265-35094266 TTTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000029103.16 ENSMUST00000147028.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_35094266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTTT chr5:35094265-35094266 TTTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000029103.16 ENSMUST00000153664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_35329151_TGTG/- chr5:35329151-35329154 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_35690205_CACA/- chr5:35690205-35690208 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_36355187_G/T chr5:36355187 T ENSMUSG00000029093.14 ENSMUST00000037370.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_36355187_G/T chr5:36355187 T ENSMUSG00000029093.14 ENSMUST00000070720.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_36355187_G/T chr5:36355187 T ENSMUSG00000029093.14 ENSMUST00000137040.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_36355187_G/T chr5:36355187 T ENSMUSG00000029093.14 ENSMUST00000141508.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_37393676_GTGTGT/- chr5:37393676-37393681 - ENSMUSG00000050248.11 ENSMUST00000056365.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_37393676_GTGTGT/- chr5:37393676-37393681 - ENSMUSG00000050248.11 ENSMUST00000159915.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1654;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_37766936_-/GT chr5:37766935-37766936 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_37813238_C/T chr5:37813238 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_38072993_TATA/- chr5:38072993-38072996 - ENSMUSG00000029125.14 ENSMUST00000031008.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38072993_TATA/- chr5:38072993-38072996 - ENSMUSG00000029125.14 ENSMUST00000042146.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38072993_TATA/- chr5:38072993-38072996 - ENSMUSG00000029125.14 ENSMUST00000114126.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38072993_TATA/- chr5:38072993-38072996 - ENSMUSG00000029125.14 ENSMUST00000146864.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3561;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38072993_TATA/- chr5:38072993-38072996 - ENSMUSG00000029125.14 ENSMUST00000154929.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38072993_TATA/- chr5:38072993-38072996 - ENSMUSG00000029125.14 ENSMUST00000202412.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000005238.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000005238.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000067872.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000067872.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000067886.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000067886.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000122970.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000122970.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000129099.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000129099.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000143758.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000143758.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000144290.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1677;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000144290.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1677;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000147664.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000147664.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000155634.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000155634.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 - ENSMUSG00000005107.13 ENSMUST00000156272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38442506_TGTG/-/TG chr5:38442506-38442509 TG ENSMUSG00000005107.13 ENSMUST00000156272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38821384_AT/- chr5:38821384-38821385 - ENSMUSG00000039315.15 ENSMUST00000169819.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_38821384_AT/- chr5:38821384-38821385 - ENSMUSG00000039315.15 ENSMUST00000171633.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_39066873_T/C chr5:39066873 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_39066877_C/A chr5:39066877 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_39767659_TCTC/- chr5:39767659-39767662 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_40129283_T/A chr5:40129283 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_40407494_A/G chr5:40407494 G ENSMUSG00000089393.1 ENSMUST00000158768.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1565;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_41114737_AGAG/- chr5:41114737-41114740 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_41788837_G/A chr5:41788837 A ENSMUSG00000061755.10 ENSMUST00000050556.10 Transcript missense_variant 9241 9094 3032 R/W Cgg/Tgg - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_41788837_G/A chr5:41788837 A ENSMUSG00000061755.10 ENSMUST00000202908.1 Transcript missense_variant 9100 8953 2985 R/W Cgg/Tgg - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_41921619_G/A chr5:41921619 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_42205815_AA/-/AAA chr5:42205815-42205816 - ENSMUSG00000067285.4 ENSMUST00000087332.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_42205815_AA/-/AAA chr5:42205815-42205816 AAA ENSMUSG00000067285.4 ENSMUST00000087332.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_42457887_C/T chr5:42457887 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_42622131_-/AGAT chr5:42622130-42622131 AGAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_42748211_AA/-/A chr5:42748211-42748212 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_42748211_AA/-/A chr5:42748211-42748212 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_42909758_AA/- chr5:42909758-42909759 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_43108488_AC/- chr5:43108488-43108489 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_43118275_C/T chr5:43118275 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_43144194_ACAC/- chr5:43144194-43144197 - ENSMUSG00000105087.1 ENSMUST00000196754.1 Transcript non_coding_transcript_exon_variant 4131-4134 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_43322283_-/TTAT chr5:43322282-43322283 TTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_43537959_C/T chr5:43537959 T ENSMUSG00000061535.11 ENSMUST00000076939.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_43537959_C/T chr5:43537959 T ENSMUSG00000061535.11 ENSMUST00000144558.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_43711999_-/TATT chr5:43711998-43711999 TATT ENSMUSG00000039765.15 ENSMUST00000048150.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_43711999_-/TATT chr5:43711998-43711999 TATT ENSMUSG00000039765.15 ENSMUST00000125866.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_43711999_-/TATT chr5:43711998-43711999 TATT ENSMUSG00000039765.15 ENSMUST00000127355.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_43959329_C/T chr5:43959329 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_45081850_G/A chr5:45081850 A ENSMUSG00000029092.9 ENSMUST00000197016.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45421601_-/GATA chr5:45421600-45421601 GATA ENSMUSG00000029092.9 ENSMUST00000197016.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000016026.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000016026.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000016026.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000045586.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000045586.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000045586.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000067997.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000067997.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000067997.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000087164.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000087164.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000087164.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000121573.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000121573.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000121573.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000156295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000156295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000156295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000186633.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000186633.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000186633.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000187615.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000187615.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000187615.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000189859.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000189859.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000189859.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 G ENSMUSG00000015882.17 ENSMUST00000190036.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 AA ENSMUSG00000015882.17 ENSMUST00000190036.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45802055_GA/G/AA/GAA chr5:45802055-45802056 GAA ENSMUSG00000015882.17 ENSMUST00000190036.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000016026.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000016026.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000045586.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000045586.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000067997.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000067997.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000087164.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000087164.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000121573.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000121573.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000156295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000156295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000186633.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000186633.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000187615.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000187615.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000189859.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000189859.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 - ENSMUSG00000015882.17 ENSMUST00000190036.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_45808303_TATA/-/TA chr5:45808303-45808306 TA ENSMUSG00000015882.17 ENSMUST00000190036.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_46659253_AA/- chr5:46659253-46659254 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_46784795_G/A chr5:46784795 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000033967.14 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000170109.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000172998.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000173107.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000173926.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000174313.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000174421.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000174658.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48022893_G/T chr5:48022893 T ENSMUSG00000031558.15 ENSMUST00000197400.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000087395.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000101214.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000101215.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000166924.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000172363.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000175660.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000176191.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48419397_CA/- chr5:48419397-48419398 - ENSMUSG00000029088.16 ENSMUST00000176978.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000087395.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000087395.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000101214.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000101214.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000101215.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000101215.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000166924.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000166924.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000172363.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000172363.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000175660.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000175660.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000176191.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000176191.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 - ENSMUSG00000029088.16 ENSMUST00000176978.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_48466695_TTTT/-/TTTTT chr5:48466695-48466698 TTTTT ENSMUSG00000029088.16 ENSMUST00000176978.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_49303426_G/T chr5:49303426 T ENSMUSG00000029088.16 ENSMUST00000087395.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_49303426_G/T chr5:49303426 T ENSMUSG00000029088.16 ENSMUST00000176191.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_49633547_ATAT/- chr5:49633547-49633550 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_49650394_T/C chr5:49650394 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_50723717_-/ATATATATAT chr5:50723716-50723717 ATATATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_51309865_GTGTGT/- chr5:51309865-51309870 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_51565037_AA/- chr5:51565037-51565038 - ENSMUSG00000029167.13 ENSMUST00000127135.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_51565037_AA/- chr5:51565037-51565038 - ENSMUSG00000029167.13 ENSMUST00000151104.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_51701343_CACA/-/CA chr5:51701343-51701346 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_51701343_CACA/-/CA chr5:51701343-51701346 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_51707931_TATA/- chr5:51707931-51707934 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_51988126_T/G chr5:51988126 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_51995270_GTGT/- chr5:51995270-51995273 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_52635638_G/T chr5:52635638 T ENSMUSG00000029173.12 ENSMUST00000031069.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4449;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_52635638_G/T chr5:52635638 T ENSMUSG00000029173.12 ENSMUST00000150709.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4449;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53349944_T/C chr5:53349944 C ENSMUSG00000077696.1 ENSMUST00000104508.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3572;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53395885_CACA/- chr5:53395885-53395888 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_53573896_ACAC/- chr5:53573896-53573899 - ENSMUSG00000039191.12 ENSMUST00000087360.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53573896_ACAC/- chr5:53573896-53573899 - ENSMUSG00000039191.12 ENSMUST00000201991.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53576344_TTCC/- chr5:53576344-53576347 - ENSMUSG00000039191.12 ENSMUST00000087360.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53576344_TTCC/- chr5:53576344-53576347 - ENSMUSG00000039191.12 ENSMUST00000201991.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000037618.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000087360.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000113865.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000200856.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2364;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000201701.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2364;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000201883.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000201912.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000201928.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000201991.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000202092.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1309;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53644429_G/- chr5:53644429 - ENSMUSG00000039191.12 ENSMUST00000202476.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2362;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53809372_ACAC/- chr5:53809372-53809375 - ENSMUSG00000039178.9 ENSMUST00000037337.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=252;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53809372_ACAC/- chr5:53809372-53809375 - ENSMUSG00000039178.9 ENSMUST00000201727.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=273;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53809372_ACAC/- chr5:53809372-53809375 - ENSMUSG00000039178.9 ENSMUST00000201958.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=279;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53809372_ACAC/- chr5:53809372-53809375 - ENSMUSG00000039178.9 ENSMUST00000202528.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=231;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53809372_ACAC/- chr5:53809372-53809375 - ENSMUSG00000039178.9 ENSMUST00000202599.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=304;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_53809372_ACAC/- chr5:53809372-53809375 - ENSMUSG00000039178.9 ENSMUST00000202695.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=274;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_54038513_-/TCTA chr5:54038512-54038513 TCTA ENSMUSG00000039156.19 ENSMUST00000117661.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_54038513_-/TCTA chr5:54038512-54038513 TCTA ENSMUSG00000039156.19 ENSMUST00000201469.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_54358540_A/C chr5:54358540 C ENSMUSG00000105912.1 ENSMUST00000197424.1 Transcript non_coding_transcript_exon_variant 2750 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_55436665_G/A chr5:55436665 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_55725975_G/C chr5:55725975 C ENSMUSG00000106335.1 ENSMUST00000199932.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2554;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_55844175_A/C chr5:55844175 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_56056492_-/TTTTTTTTTTTTTTTTTT chr5:56056491-56056492 TTTTTTTTTTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_58513675_-/GAAA chr5:58513674-58513675 GAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_58980495_TATATA/- chr5:58980495-58980500 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_59214151_TGTG/- chr5:59214151-59214154 - ENSMUSG00000096124.1 ENSMUST00000177609.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=792;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_59371816_TGTG/-/TG chr5:59371816-59371819 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_59371816_TGTG/-/TG chr5:59371816-59371819 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_59405209_ATGGATGG/- chr5:59405209-59405216 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_60156997_C/T chr5:60156997 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_61035367_GAGAGA/- chr5:61035367-61035372 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_61219358_A/- chr5:61219358 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_61292881_A/G chr5:61292881 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_61333056_A/G chr5:61333056 G ENSMUSG00000106370.2 ENSMUST00000198954.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4840;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_61799669_G/T chr5:61799669 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_62616842_-/CTT chr5:62616841-62616842 CTT ENSMUSG00000037999.13 ENSMUST00000076623.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_62616842_-/CTT chr5:62616841-62616842 CTT ENSMUSG00000037999.13 ENSMUST00000160620.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4467;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_62616842_-/CTT chr5:62616841-62616842 CTT ENSMUSG00000105694.1 ENSMUST00000196835.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3383;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_62769709_C/T chr5:62769709 T ENSMUSG00000037999.13 ENSMUST00000076623.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3589;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_62769709_C/T chr5:62769709 T ENSMUSG00000037999.13 ENSMUST00000159470.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3550;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_62771369_A/T chr5:62771369 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_62869057_T/C chr5:62869057 C ENSMUSG00000090326.1 ENSMUST00000170704.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_62869060_C/T chr5:62869060 T ENSMUSG00000090326.1 ENSMUST00000170704.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_63057441_GTGT/-/GT chr5:63057441-63057444 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_63057441_GTGT/-/GT chr5:63057441-63057444 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_63511889_-/ACAC chr5:63511888-63511889 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_63663815_T/A chr5:63663815 A ENSMUSG00000090061.9 ENSMUST00000159584.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_63663815_T/A chr5:63663815 A ENSMUSG00000090061.9 ENSMUST00000160066.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_63663815_T/A chr5:63663815 A ENSMUSG00000090061.9 ENSMUST00000162166.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_63828883_TT/-/T chr5:63828883-63828884 - ENSMUSG00000060512.7 ENSMUST00000081747.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_63828883_TT/-/T chr5:63828883-63828884 T ENSMUSG00000060512.7 ENSMUST00000081747.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_63828883_TT/-/T chr5:63828883-63828884 - ENSMUSG00000060512.7 ENSMUST00000196575.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_63828883_TT/-/T chr5:63828883-63828884 T ENSMUSG00000060512.7 ENSMUST00000196575.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_64525062_TC/- chr5:64525062-64525063 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_64588833_ACAC/-/AC chr5:64588833-64588836 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_64588833_ACAC/-/AC chr5:64588833-64588836 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_64759122_AA/-/AAAA chr5:64759122-64759123 - ENSMUSG00000097640.7 ENSMUST00000180912.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_64759122_AA/-/AAAA chr5:64759122-64759123 AAAA ENSMUSG00000097640.7 ENSMUST00000180912.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_64884000_TG/T/GG chr5:64884000-64884001 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_64884000_TG/T/GG chr5:64884000-64884001 GG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_65415011_TT/- chr5:65415011-65415012 - ENSMUSG00000029199.11 ENSMUST00000031101.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4318;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65415011_TT/- chr5:65415011-65415012 - ENSMUSG00000029201.14 ENSMUST00000031103.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65415011_TT/- chr5:65415011-65415012 - ENSMUSG00000029201.14 ENSMUST00000125375.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65415011_TT/- chr5:65415011-65415012 - ENSMUSG00000029201.14 ENSMUST00000139402.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2506;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65415011_TT/- chr5:65415011-65415012 - ENSMUSG00000105896.1 ENSMUST00000200016.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1984;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000037822.12 ENSMUST00000125954.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3827;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000142407.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000037822.12 ENSMUST00000149167.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3772;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000200946.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000201266.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000201292.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000201383.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000201984.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000202082.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000202601.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000029203.16 ENSMUST00000202679.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65540957_-/T chr5:65540956-65540957 T ENSMUSG00000107362.1 ENSMUST00000202699.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=972;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000142407.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000200946.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000201266.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000201292.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000201383.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000201984.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000202082.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000202601.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_65555371_TT/- chr5:65555371-65555372 - ENSMUSG00000029203.16 ENSMUST00000202679.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_66183632_-/CTTT chr5:66183631-66183632 CTTT ENSMUSG00000107014.1 ENSMUST00000201903.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_67118557_TGTG/-/TG chr5:67118557-67118560 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_67118557_TGTG/-/TG chr5:67118557-67118560 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_67179650_-/AAAT chr5:67179649-67179650 AAAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_67249650_AG/- chr5:67249650-67249651 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_67949629_CACA/- chr5:67949629-67949632 - ENSMUSG00000095346.1 ENSMUST00000177616.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3208;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_67949629_CACA/- chr5:67949629-67949632 - ENSMUSG00000094719.4 ENSMUST00000177891.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_67949629_CACA/- chr5:67949629-67949632 - ENSMUSG00000094719.4 ENSMUST00000201736.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_67949629_CACA/- chr5:67949629-67949632 - ENSMUSG00000094719.4 ENSMUST00000201798.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_67949629_CACA/- chr5:67949629-67949632 - ENSMUSG00000094719.4 ENSMUST00000202730.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_68151375_ACAC/- chr5:68151375-68151378 - ENSMUSG00000068082.12 ENSMUST00000094715.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_68735167_C/T chr5:68735167 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_69144788_AA/-/A chr5:69144788-69144789 - ENSMUSG00000037653.7 ENSMUST00000054095.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69144788_AA/-/A chr5:69144788-69144789 A ENSMUSG00000037653.7 ENSMUST00000054095.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69263888_CTTT/- chr5:69263888-69263891 - ENSMUSG00000037653.7 ENSMUST00000054095.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69263888_CTTT/- chr5:69263888-69263891 - ENSMUSG00000106753.1 ENSMUST00000200980.1 Transcript non_coding_transcript_exon_variant 1823-1826 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69325831_C/T chr5:69325831 T ENSMUSG00000037653.7 ENSMUST00000054095.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69325831_C/T chr5:69325831 T ENSMUSG00000037653.7 ENSMUST00000087231.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69333945_-/TTC chr5:69333944-69333945 TTC ENSMUSG00000037653.7 ENSMUST00000054095.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69333945_-/TTC chr5:69333944-69333945 TTC ENSMUSG00000037653.7 ENSMUST00000087231.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_69743510_C/A chr5:69743510 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_70222205_TGTG/- chr5:70222205-70222208 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_70832291_AA/-/A chr5:70832291-70832292 - ENSMUSG00000001260.10 ENSMUST00000031119.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_70832291_AA/-/A chr5:70832291-70832292 A ENSMUSG00000001260.10 ENSMUST00000031119.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_70832291_AA/-/A chr5:70832291-70832292 - ENSMUSG00000001260.10 ENSMUST00000197068.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_70832291_AA/-/A chr5:70832291-70832292 A ENSMUSG00000001260.10 ENSMUST00000197068.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_70832291_AA/-/A chr5:70832291-70832292 - ENSMUSG00000001260.10 ENSMUST00000199705.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_70832291_AA/-/A chr5:70832291-70832292 A ENSMUSG00000001260.10 ENSMUST00000199705.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_70832291_AA/-/A chr5:70832291-70832292 - ENSMUSG00000001260.10 ENSMUST00000200126.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_70832291_AA/-/A chr5:70832291-70832292 A ENSMUSG00000001260.10 ENSMUST00000200126.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_71484391_TATA/- chr5:71484391-71484394 - ENSMUSG00000049387.10 ENSMUST00000050129.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_71525845_C/T chr5:71525845 T ENSMUSG00000049387.10 ENSMUST00000050129.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72085859_TT/-/T chr5:72085859-72085860 - ENSMUSG00000029212.11 ENSMUST00000031122.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72085859_TT/-/T chr5:72085859-72085860 T ENSMUSG00000029212.11 ENSMUST00000031122.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72085859_TT/-/T chr5:72085859-72085860 - ENSMUSG00000029212.11 ENSMUST00000199967.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72085859_TT/-/T chr5:72085859-72085860 T ENSMUSG00000029212.11 ENSMUST00000199967.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72218110_C/T chr5:72218110 T ENSMUSG00000046808.17 ENSMUST00000126664.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72218110_C/T chr5:72218110 T ENSMUSG00000046808.17 ENSMUST00000156937.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72218110_C/T chr5:72218110 T ENSMUSG00000046808.17 ENSMUST00000169617.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72466030_C/T chr5:72466030 T ENSMUSG00000005220.10 ENSMUST00000005352.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72466030_C/T chr5:72466030 T ENSMUSG00000005220.10 ENSMUST00000167460.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72466030_C/T chr5:72466030 T ENSMUSG00000005220.10 ENSMUST00000175766.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72466030_C/T chr5:72466030 T ENSMUSG00000005220.10 ENSMUST00000176974.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72466030_C/T chr5:72466030 T ENSMUSG00000005220.10 ENSMUST00000177290.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72798235_AA/- chr5:72798235-72798236 - ENSMUSG00000029217.16 ENSMUST00000071944.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72798235_AA/- chr5:72798235-72798236 - ENSMUSG00000029217.16 ENSMUST00000073843.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72798235_AA/- chr5:72798235-72798236 - ENSMUSG00000029217.16 ENSMUST00000113594.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72798235_AA/- chr5:72798235-72798236 - ENSMUSG00000029217.16 ENSMUST00000126481.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72798235_AA/- chr5:72798235-72798236 - ENSMUSG00000029217.16 ENSMUST00000138842.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_72798235_AA/- chr5:72798235-72798236 - ENSMUSG00000029217.16 ENSMUST00000149533.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 - ENSMUSG00000070733.13 ENSMUST00000101127.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 A ENSMUSG00000070733.13 ENSMUST00000101127.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 - ENSMUSG00000070733.13 ENSMUST00000123446.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 A ENSMUSG00000070733.13 ENSMUST00000123446.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 - ENSMUSG00000070733.13 ENSMUST00000148433.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 A ENSMUSG00000070733.13 ENSMUST00000148433.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 - ENSMUSG00000070733.13 ENSMUST00000176910.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4855;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73196734_AA/-/A chr5:73196734-73196735 A ENSMUSG00000070733.13 ENSMUST00000176910.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4855;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73421436_C/T chr5:73421436 T ENSMUSG00000029154.13 ENSMUST00000031040.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73421436_C/T chr5:73421436 T ENSMUSG00000029154.13 ENSMUST00000065543.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73421446_-/TTTTTTGCTAGATAGGGTCTTTTTATGTAGCTTTGTCTGTGCTGAAACTCACTATGTAGCC chr5:73421445-73421446 TTTTTTGCTAGATAGGGTCTTTTTATGTAGCTTTGTCTGTGCTGAAACTCACTATGTAGCC ENSMUSG00000029154.13 ENSMUST00000031040.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73421446_-/TTTTTTGCTAGATAGGGTCTTTTTATGTAGCTTTGTCTGTGCTGAAACTCACTATGTAGCC chr5:73421445-73421446 TTTTTTGCTAGATAGGGTCTTTTTATGTAGCTTTGTCTGTGCTGAAACTCACTATGTAGCC ENSMUSG00000029154.13 ENSMUST00000065543.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_73599994_-/ACAC chr5:73599993-73599994 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_73712313_TCTC/-/TC chr5:73712313-73712316 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_73712313_TCTC/-/TC chr5:73712313-73712316 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_73833702_AA/-/A/AAA chr5:73833702-73833703 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_73833702_AA/-/A/AAA chr5:73833702-73833703 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_73833702_AA/-/A/AAA chr5:73833702-73833703 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_73987542_G/A chr5:73987542 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_73987702_G/A chr5:73987702 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_74108739_GG/-/G chr5:74108739-74108740 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_74108739_GG/-/G chr5:74108739-74108740 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_74366108_CTCT/-/CT chr5:74366108-74366111 - ENSMUSG00000062110.14 ENSMUST00000072857.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74366108_CTCT/-/CT chr5:74366108-74366111 CT ENSMUSG00000062110.14 ENSMUST00000072857.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74366108_CTCT/-/CT chr5:74366108-74366111 - ENSMUSG00000062110.14 ENSMUST00000113542.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74366108_CTCT/-/CT chr5:74366108-74366111 CT ENSMUSG00000062110.14 ENSMUST00000113542.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74366108_CTCT/-/CT chr5:74366108-74366111 - ENSMUSG00000107009.1 ENSMUST00000201755.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1052;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74366108_CTCT/-/CT chr5:74366108-74366111 CT ENSMUSG00000107009.1 ENSMUST00000201755.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1052;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000039744.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000087161.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000113531.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000117388.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000117525.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000121690.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000127396.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_74649471_-/G chr5:74649470-74649471 G ENSMUSG00000029228.15 ENSMUST00000153543.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_75439864_ACAC/-/AC chr5:75439864-75439867 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_75439864_ACAC/-/AC chr5:75439864-75439867 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_75754095_A/C chr5:75754095 C ENSMUSG00000106726.1 ENSMUST00000202985.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_75943891_AA/- chr5:75943891-75943892 - ENSMUSG00000062960.10 ENSMUST00000113516.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76041560_-/AGAA chr5:76041559-76041560 AGAA ENSMUSG00000106756.1 ENSMUST00000201402.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1538;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76073839_GTGT/- chr5:76073839-76073842 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_76383083_CACACA/-/CACA chr5:76383083-76383088 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_76383083_CACACA/-/CACA chr5:76383083-76383088 CACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_76620918_TGTG/- chr5:76620918-76620921 - ENSMUSG00000036403.15 ENSMUST00000049060.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76620918_TGTG/- chr5:76620918-76620921 - ENSMUSG00000036403.15 ENSMUST00000121979.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76620918_TGTG/- chr5:76620918-76620921 - ENSMUSG00000036403.15 ENSMUST00000130651.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76639553_CACA/-/CA chr5:76639553-76639556 - ENSMUSG00000036403.15 ENSMUST00000049060.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76639553_CACA/-/CA chr5:76639553-76639556 CA ENSMUSG00000036403.15 ENSMUST00000049060.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76639553_CACA/-/CA chr5:76639553-76639556 - ENSMUSG00000036403.15 ENSMUST00000121979.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76639553_CACA/-/CA chr5:76639553-76639556 CA ENSMUSG00000036403.15 ENSMUST00000121979.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76639553_CACA/-/CA chr5:76639553-76639556 - ENSMUSG00000036403.15 ENSMUST00000130651.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_76639553_CACA/-/CA chr5:76639553-76639556 CA ENSMUSG00000036403.15 ENSMUST00000130651.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_77251786_TCTC/-/TC chr5:77251786-77251789 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_77251786_TCTC/-/TC chr5:77251786-77251789 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_77418499_G/C chr5:77418499 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_77436688_ACAC/-/AC chr5:77436688-77436691 - ENSMUSG00000106906.1 ENSMUST00000201510.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_77436688_ACAC/-/AC chr5:77436688-77436691 AC ENSMUSG00000106906.1 ENSMUST00000201510.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_77702920_T/G chr5:77702920 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_78021830_A/- chr5:78021830 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_78490714_-/ATAAAAAAAAAAAAAAAAAA chr5:78490713-78490714 ATAAAAAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_78771002_TGTG/-/TG chr5:78771002-78771005 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_78771002_TGTG/-/TG chr5:78771002-78771005 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_78882936_TCTCTC/-/TCTC chr5:78882936-78882941 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_78882936_TCTCTC/-/TCTC chr5:78882936-78882941 TCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_78972889_-/AAAAAAAAAAAAAAAAAAAAAAAAAAA chr5:78972888-78972889 AAAAAAAAAAAAAAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_79032991_T/G chr5:79032991 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_79423482_T/C chr5:79423482 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_79560323_G/- chr5:79560323 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_79848181_T/C chr5:79848181 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_79848224_G/T chr5:79848224 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_80003630_TCTC/- chr5:80003630-80003633 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_80413345_TGTG/- chr5:80413345-80413348 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_80896715_-/ATAATA chr5:80896714-80896715 ATAATA ENSMUSG00000065235.1 ENSMUST00000083301.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2958;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_80896715_-/ATAATA chr5:80896714-80896715 ATAATA ENSMUSG00000083829.1 ENSMUST00000119065.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4035;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000036068.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000072521.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000117253.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000117407.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000117985.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000118034.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000118078.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000118442.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000119385.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000119788.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000120128.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000120144.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000120292.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000120445.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000120673.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000121641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000121707.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000122037.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000122356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000124117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000132375.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_81696672_C/T chr5:81696672 T ENSMUSG00000037605.16 ENSMUST00000153264.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_83907825_G/T chr5:83907825 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_84044707_TTTC/- chr5:84044707-84044710 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000053733.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000113398.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000113399.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000113401.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000113403.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000113406.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000136775.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000152573.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000154804.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378679_C/T chr5:84378679 T ENSMUSG00000029245.16 ENSMUST00000155469.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000053733.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000113398.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000113399.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000113401.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000113403.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000113406.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000136775.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000152573.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000154804.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84378692_A/G chr5:84378692 G ENSMUSG00000029245.16 ENSMUST00000155469.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_84969822_A/C chr5:84969822 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_85160898_T/A chr5:85160898 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_85377869_A/C chr5:85377869 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_85751494_TCTCTC/- chr5:85751494-85751499 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_85843883_TT/- chr5:85843883-85843884 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_85981808_GTGT/-/GT chr5:85981808-85981811 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_85981808_GTGT/-/GT chr5:85981808-85981811 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_86459216_TATA/-/TA chr5:86459216-86459219 - ENSMUSG00000072845.3 ENSMUST00000101073.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_86459216_TATA/-/TA chr5:86459216-86459219 TA ENSMUSG00000072845.3 ENSMUST00000101073.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_86855727_-/AC chr5:86855726-86855727 AC ENSMUSG00000105309.1 ENSMUST00000200382.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4930;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_87273771_ATATATAT/- chr5:87273771-87273778 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_87584007_TT/-/TTT chr5:87584007-87584008 - ENSMUSG00000029272.8 ENSMUST00000031201.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_87584007_TT/-/TTT chr5:87584007-87584008 TTT ENSMUSG00000029272.8 ENSMUST00000031201.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_88371241_ACAC/- chr5:88371241-88371244 - ENSMUSG00000029282.3 ENSMUST00000073363.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4864;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_88816864_C/T chr5:88816864 T ENSMUSG00000105640.1 ENSMUST00000197195.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3394;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89091756_GTGT/- chr5:89091756-89091759 - ENSMUSG00000060961.14 ENSMUST00000113218.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89091756_GTGT/- chr5:89091756-89091759 - ENSMUSG00000060961.14 ENSMUST00000130041.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89091756_GTGT/- chr5:89091756-89091759 - ENSMUSG00000060961.14 ENSMUST00000134303.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89091756_GTGT/- chr5:89091756-89091759 - ENSMUSG00000060961.14 ENSMUST00000148750.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89091756_GTGT/- chr5:89091756-89091759 - ENSMUSG00000060961.14 ENSMUST00000156238.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89434030_T/C chr5:89434030 C ENSMUSG00000035540.12 ENSMUST00000049209.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89434030_T/C chr5:89434030 C ENSMUSG00000035540.12 ENSMUST00000200534.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_89948485_TTTT/- chr5:89948485-89948488 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_90819211_G/A chr5:90819211 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_90901806_GG/- chr5:90901806-90901807 - ENSMUSG00000058427.10 ENSMUST00000075433.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2066;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_90901806_GG/- chr5:90901806-90901807 - ENSMUSG00000058427.10 ENSMUST00000200681.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2064;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_90901806_GG/- chr5:90901806-90901807 - ENSMUSG00000058427.10 ENSMUST00000200919.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2066;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_90901806_GG/- chr5:90901806-90901807 - ENSMUSG00000058427.10 ENSMUST00000202317.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2066;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_91445583_CTCT/- chr5:91445583-91445586 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_91484767_GTGT/- chr5:91484767-91484770 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_92109384_ACAC/- chr5:92109384-92109387 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 - ENSMUSG00000029381.16 ENSMUST00000113054.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 CTTT ENSMUSG00000029381.16 ENSMUST00000113054.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 - ENSMUSG00000029381.16 ENSMUST00000113055.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 CTTT ENSMUSG00000029381.16 ENSMUST00000113055.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 - ENSMUSG00000029381.16 ENSMUST00000168878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 CTTT ENSMUSG00000029381.16 ENSMUST00000168878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 - ENSMUSG00000029381.16 ENSMUST00000225438.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92853859_CTTTCTTT/-/CTTT chr5:92853859-92853866 CTTT ENSMUSG00000029381.16 ENSMUST00000225438.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 - ENSMUSG00000029381.16 ENSMUST00000113054.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 TT ENSMUSG00000029381.16 ENSMUST00000113054.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 - ENSMUSG00000029381.16 ENSMUST00000113055.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 TT ENSMUSG00000029381.16 ENSMUST00000113055.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 - ENSMUSG00000029381.16 ENSMUST00000168878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 TT ENSMUSG00000029381.16 ENSMUST00000168878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 - ENSMUSG00000029381.16 ENSMUST00000225438.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92854155_TTT/-/TT chr5:92854155-92854157 TT ENSMUSG00000029381.16 ENSMUST00000225438.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92877666_T/- chr5:92877666 - ENSMUSG00000029381.16 ENSMUST00000113054.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92877666_T/- chr5:92877666 - ENSMUSG00000029381.16 ENSMUST00000113055.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92877666_T/- chr5:92877666 - ENSMUSG00000029381.16 ENSMUST00000168878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92877666_T/- chr5:92877666 - ENSMUSG00000029381.16 ENSMUST00000225438.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92885982_TT/- chr5:92885982-92885983 - ENSMUSG00000029381.16 ENSMUST00000113054.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92885982_TT/- chr5:92885982-92885983 - ENSMUSG00000029381.16 ENSMUST00000113055.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92885982_TT/- chr5:92885982-92885983 - ENSMUSG00000029381.16 ENSMUST00000168878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_92885982_TT/- chr5:92885982-92885983 - ENSMUSG00000029381.16 ENSMUST00000225438.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_95552884_TTTTT/-/TTTTTT chr5:95552884-95552888 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_95552884_TTTTT/-/TTTTTT chr5:95552884-95552888 TTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_96114686_-/AAGAG chr5:96114685-96114686 AAGAG ENSMUSG00000034724.18 ENSMUST00000036646.13 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96114686_-/AAGAG chr5:96114685-96114686 AAGAG ENSMUSG00000034724.18 ENSMUST00000113005.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96114686_-/AAGAG chr5:96114685-96114686 AAGAG ENSMUSG00000034724.18 ENSMUST00000122003.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96114686_-/AAGAG chr5:96114685-96114686 AAGAG ENSMUSG00000034724.18 ENSMUST00000129646.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96114686_-/AAGAG chr5:96114685-96114686 AAGAG ENSMUSG00000034724.18 ENSMUST00000137066.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96114686_-/AAGAG chr5:96114685-96114686 AAGAG ENSMUSG00000034724.18 ENSMUST00000155901.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000036646.13 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000113005.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000122003.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000129646.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000137207.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000141383.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000154500.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_96160140_A/C chr5:96160140 C ENSMUSG00000034724.18 ENSMUST00000155901.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_97019121_A/T chr5:97019121 T ENSMUSG00000034663.13 ENSMUST00000035635.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_97019121_A/T chr5:97019121 T ENSMUSG00000034663.13 ENSMUST00000112974.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_97160835_GTGTGT/-/GTGT chr5:97160835-97160840 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_97160835_GTGTGT/-/GTGT chr5:97160835-97160840 GTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_97942934_AA/- chr5:97942934-97942935 - ENSMUSG00000029338.13 ENSMUST00000031281.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_97942934_AA/- chr5:97942934-97942935 - ENSMUSG00000029338.13 ENSMUST00000199088.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_98163266_TGTG/- chr5:98163266-98163269 - ENSMUSG00000035456.9 ENSMUST00000210477.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3929;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_98600076_-/TGTG chr5:98600075-98600076 TGTG ENSMUSG00000057816.7 ENSMUST00000080333.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_98600076_-/TGTG chr5:98600075-98600076 TGTG ENSMUSG00000057816.7 ENSMUST00000196339.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_99059214_AA/-/A chr5:99059214-99059215 - ENSMUSG00000105579.2 ENSMUST00000198339.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_99059214_AA/-/A chr5:99059214-99059215 A ENSMUSG00000105579.2 ENSMUST00000198339.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000094578.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000182002.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000182433.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000182569.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000182664.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3119;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000182812.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000182886.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100367389_C/A chr5:100367389 A ENSMUSG00000035325.16 ENSMUST00000182988.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000046154.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000123572.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000137750.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000139234.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000144030.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000144716.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000149714.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000152387.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000035310.15 ENSMUST00000154921.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100496027_C/A chr5:100496027 A ENSMUSG00000088742.1 ENSMUST00000158117.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4116;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100906406_TTT/-/TT chr5:100906406-100906408 - ENSMUSG00000106255.1 ENSMUST00000199211.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_100906406_TTT/-/TT chr5:100906406-100906408 TT ENSMUSG00000106255.1 ENSMUST00000199211.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_101538766_T/G chr5:101538766 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_101711435_GTGT/- chr5:101711435-101711438 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_102110796_-/ATCT chr5:102110795-102110796 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_103626346_GAGAGA/- chr5:103626346-103626351 - ENSMUSG00000029321.1 ENSMUST00000031263.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_103626346_GAGAGA/- chr5:103626346-103626351 - ENSMUSG00000084126.1 ENSMUST00000118016.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1300;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_103858526_C/G chr5:103858526 G ENSMUSG00000029312.12 ENSMUST00000031254.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3524;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_103858526_C/G chr5:103858526 G ENSMUSG00000029313.18 ENSMUST00000031256.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3204;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_103858526_C/G chr5:103858526 G ENSMUSG00000029313.18 ENSMUST00000054979.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3204;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_103858526_C/G chr5:103858526 G ENSMUSG00000029312.12 ENSMUST00000112811.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3447;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_103858526_C/G chr5:103858526 G ENSMUSG00000029312.12 ENSMUST00000112815.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3447;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_103858526_C/G chr5:103858526 G ENSMUSG00000029312.12 ENSMUST00000131843.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3554;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_104103121_TGTACAGCTCCCTGCAAGTGCCTGTGCTCCCAGGGTCTGCAA/- chr5:104103121-104103162 - ENSMUSG00000029309.7 ENSMUST00000031249.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_104103121_TGTACAGCTCCCTGCAAGTGCCTGTGCTCCCAGGGTCTGCAA/- chr5:104103121-104103162 - ENSMUSG00000029309.7 ENSMUST00000199947.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_104444825_AGAG/- chr5:104444825-104444828 - ENSMUSG00000029304.14 ENSMUST00000031243.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3775;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_104444825_AGAG/- chr5:104444825-104444828 - ENSMUSG00000029304.14 ENSMUST00000086833.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3777;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_104444825_AGAG/- chr5:104444825-104444828 - ENSMUSG00000029304.14 ENSMUST00000112747.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3782;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_104444825_AGAG/- chr5:104444825-104444828 - ENSMUSG00000029304.14 ENSMUST00000112748.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3778;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105755345_TGTG/- chr5:105755345-105755348 - ENSMUSG00000046079.16 ENSMUST00000060531.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105755345_TGTG/- chr5:105755345-105755348 - ENSMUSG00000046079.16 ENSMUST00000120847.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105755345_TGTG/- chr5:105755345-105755348 - ENSMUSG00000046079.16 ENSMUST00000127686.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105755345_TGTG/- chr5:105755345-105755348 - ENSMUSG00000046079.16 ENSMUST00000140081.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105755345_TGTG/- chr5:105755345-105755348 - ENSMUSG00000046079.16 ENSMUST00000149831.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105755345_TGTG/- chr5:105755345-105755348 - ENSMUSG00000046079.16 ENSMUST00000154807.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105755345_TGTG/- chr5:105755345-105755348 - ENSMUSG00000046079.16 ENSMUST00000156630.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105780096_CA/AG chr5:105780096-105780097 AG ENSMUSG00000046079.16 ENSMUST00000060531.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105780096_CA/AG chr5:105780096-105780097 AG ENSMUSG00000046079.16 ENSMUST00000120847.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105780096_CA/AG chr5:105780096-105780097 AG ENSMUSG00000046079.16 ENSMUST00000127686.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105780096_CA/AG chr5:105780096-105780097 AG ENSMUSG00000046079.16 ENSMUST00000140081.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105780096_CA/AG chr5:105780096-105780097 AG ENSMUSG00000046079.16 ENSMUST00000149831.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105780096_CA/AG chr5:105780096-105780097 AG ENSMUSG00000046079.16 ENSMUST00000154807.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105780096_CA/AG chr5:105780096-105780097 AG ENSMUSG00000046079.16 ENSMUST00000156630.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_105945136_-/CTAT chr5:105945135-105945136 CTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_106453027_TGTG/- chr5:106453027-106453030 - ENSMUSG00000034384.11 ENSMUST00000086795.7 Transcript 3_prime_UTR_variant 1807-1810 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_106723976_T/A chr5:106723976 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_106765993_GTGT/-/GT chr5:106765993-106765996 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_106765993_GTGT/-/GT chr5:106765993-106765996 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_107146918_TCTC/-/TC chr5:107146918-107146921 - ENSMUSG00000029287.14 ENSMUST00000031224.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107146918_TCTC/-/TC chr5:107146918-107146921 TC ENSMUSG00000029287.14 ENSMUST00000031224.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107146918_TCTC/-/TC chr5:107146918-107146921 - ENSMUSG00000029287.14 ENSMUST00000138469.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107146918_TCTC/-/TC chr5:107146918-107146921 TC ENSMUSG00000029287.14 ENSMUST00000138469.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107146918_TCTC/-/TC chr5:107146918-107146921 - ENSMUSG00000029287.14 ENSMUST00000146591.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1059;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107146918_TCTC/-/TC chr5:107146918-107146921 TC ENSMUSG00000029287.14 ENSMUST00000146591.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1059;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107180362_-/AAG chr5:107180361-107180362 AAG ENSMUSG00000029287.14 ENSMUST00000031224.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107180362_-/AAG chr5:107180361-107180362 AAG ENSMUSG00000029287.14 ENSMUST00000138469.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107180362_-/AAG chr5:107180361-107180362 AAG ENSMUSG00000029287.14 ENSMUST00000146591.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107691644_GTGT/- chr5:107691644-107691647 - ENSMUSG00000097035.2 ENSMUST00000180428.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3634;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_107691644_GTGT/- chr5:107691644-107691647 - ENSMUSG00000105421.1 ENSMUST00000200000.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2477;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000046603.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000046603.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000135225.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000135225.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000137872.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000137872.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000139303.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000139303.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000145467.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000145467.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000156110.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1023;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000156110.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1023;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000199048.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000199048.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 - ENSMUSG00000062234.14 ENSMUST00000200204.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_108592694_TT/-/TTT chr5:108592694-108592695 TTT ENSMUSG00000062234.14 ENSMUST00000200204.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_109160091_C/- chr5:109160091 - ENSMUSG00000091635.2 ENSMUST00000053253.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_109213053_-/T chr5:109213052-109213053 T ENSMUSG00000091059.2 ENSMUST00000170341.2 Transcript 3_prime_UTR_variant 5082-5083 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_109213053_-/T chr5:109213052-109213053 T ENSMUSG00000091059.2 ENSMUST00000233137.1 Transcript 3_prime_UTR_variant,NMD_transcript_variant 4186-4187 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_109220886_GTGT/- chr5:109220886-109220889 - ENSMUSG00000091059.2 ENSMUST00000170341.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_109220886_GTGT/- chr5:109220886-109220889 - ENSMUSG00000091059.2 ENSMUST00000233137.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_109672651_AA/- chr5:109672651-109672652 - ENSMUSG00000072763.2 ENSMUST00000092720.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1893;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110016216_A/G chr5:110016216 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_110718357_AA/- chr5:110718357-110718358 - ENSMUSG00000029505.17 ENSMUST00000041558.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110718357_AA/- chr5:110718357-110718358 - ENSMUSG00000029505.17 ENSMUST00000112435.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110718357_AA/- chr5:110718357-110718358 - ENSMUSG00000029505.17 ENSMUST00000112436.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 - ENSMUSG00000029505.17 ENSMUST00000041558.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 AAA ENSMUSG00000029505.17 ENSMUST00000041558.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 - ENSMUSG00000029505.17 ENSMUST00000112433.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 AAA ENSMUSG00000029505.17 ENSMUST00000112433.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 - ENSMUSG00000029505.17 ENSMUST00000112435.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 AAA ENSMUSG00000029505.17 ENSMUST00000112435.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 - ENSMUSG00000029505.17 ENSMUST00000112436.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 AAA ENSMUSG00000029505.17 ENSMUST00000112436.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 - ENSMUSG00000029505.17 ENSMUST00000146458.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110748528_AA/-/AAA chr5:110748528-110748529 AAA ENSMUSG00000029505.17 ENSMUST00000146458.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110761635_AAA/- chr5:110761635-110761637 - ENSMUSG00000029505.17 ENSMUST00000041558.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110761635_AAA/- chr5:110761635-110761637 - ENSMUSG00000029505.17 ENSMUST00000112433.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110761635_AAA/- chr5:110761635-110761637 - ENSMUSG00000029505.17 ENSMUST00000112435.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110761635_AAA/- chr5:110761635-110761637 - ENSMUSG00000029505.17 ENSMUST00000112436.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110761635_AAA/- chr5:110761635-110761637 - ENSMUSG00000029505.17 ENSMUST00000146458.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110761635_AAA/- chr5:110761635-110761637 - ENSMUSG00000029505.17 ENSMUST00000146652.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110761635_AAA/- chr5:110761635-110761637 - ENSMUSG00000096238.1 ENSMUST00000178031.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4444;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110886388_TA/- chr5:110886388-110886389 - ENSMUSG00000033209.17 ENSMUST00000040111.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110886388_TA/- chr5:110886388-110886389 - ENSMUSG00000033209.17 ENSMUST00000143505.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110886388_TA/- chr5:110886388-110886389 - ENSMUSG00000033209.17 ENSMUST00000156290.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110982098_GTGT/- chr5:110982098-110982101 - ENSMUSG00000033209.17 ENSMUST00000040111.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110982098_GTGT/- chr5:110982098-110982101 - ENSMUSG00000033209.17 ENSMUST00000156290.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_110982098_GTGT/- chr5:110982098-110982101 - ENSMUSG00000105112.1 ENSMUST00000199644.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2881;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111234055_AA/- chr5:111234055-111234056 - ENSMUSG00000033209.17 ENSMUST00000040111.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111234055_AA/- chr5:111234055-111234056 - ENSMUSG00000033209.17 ENSMUST00000125470.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4640;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111234055_AA/- chr5:111234055-111234056 - ENSMUSG00000033209.17 ENSMUST00000128584.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111234055_AA/- chr5:111234055-111234056 - ENSMUSG00000033209.17 ENSMUST00000129017.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1259;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111234055_AA/- chr5:111234055-111234056 - ENSMUSG00000033209.17 ENSMUST00000156290.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111739975_-/CCTT chr5:111739974-111739975 CCTT ENSMUSG00000085271.7 ENSMUST00000129065.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111739975_-/CCTT chr5:111739974-111739975 CCTT ENSMUSG00000085271.7 ENSMUST00000129146.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111739975_-/CCTT chr5:111739974-111739975 CCTT ENSMUSG00000085271.7 ENSMUST00000137398.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_111739975_-/CCTT chr5:111739974-111739975 CCTT ENSMUSG00000085919.1 ENSMUST00000149538.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2874;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_112197360_T/- chr5:112197360 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_112705688_GTGT/- chr5:112705688-112705691 - ENSMUSG00000072720.9 ENSMUST00000086617.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_112705688_GTGT/- chr5:112705688-112705691 - ENSMUSG00000072720.9 ENSMUST00000182189.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_113028506_GGGG/- chr5:113028506-113028509 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_113041887_A/C chr5:113041887 C ENSMUSG00000065373.1 ENSMUST00000083439.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2257;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_113041890_G/C chr5:113041890 C ENSMUSG00000065373.1 ENSMUST00000083439.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2254;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_113417394_TCTC/- chr5:113417394-113417397 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_113928274_-/AAGA chr5:113928273-113928274 AAGA ENSMUSG00000065320.1 ENSMUST00000083386.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=450;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_113928274_-/AAGA chr5:113928273-113928274 AAGA ENSMUSG00000105664.1 ENSMUST00000197573.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=281;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114196337_G/C chr5:114196337 C ENSMUSG00000042010.16 ENSMUST00000031583.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114196337_G/C chr5:114196337 C ENSMUSG00000042010.16 ENSMUST00000102582.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114196337_G/C chr5:114196337 C ENSMUSG00000042010.16 ENSMUST00000143276.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3442;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114500346_TT/- chr5:114500346-114500347 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_114939817_T/- chr5:114939817 - ENSMUSG00000029559.15 ENSMUST00000031538.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2341;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000041827.15 ENSMUST00000031540.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1905;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000041827.15 ENSMUST00000112143.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1902;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000029559.15 ENSMUST00000131427.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2393;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000029559.15 ENSMUST00000140090.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000041827.15 ENSMUST00000140159.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3750;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000029559.15 ENSMUST00000147743.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2387;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000041827.15 ENSMUST00000155274.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2130;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_114939817_T/- chr5:114939817 - ENSMUSG00000041827.15 ENSMUST00000155394.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3842;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000040555.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000112096.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000112097.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000133276.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000139853.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000151085.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000152613.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4364;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253851_T/C chr5:115253851 C ENSMUSG00000041740.16 ENSMUST00000202855.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2370;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000040555.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000112096.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000112097.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000133276.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000139853.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000151085.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000152613.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4366;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115253853_G/A chr5:115253853 A ENSMUSG00000041740.16 ENSMUST00000202855.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2368;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 - ENSMUSG00000041740.16 ENSMUST00000040555.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TT ENSMUSG00000041740.16 ENSMUST00000040555.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TTT ENSMUSG00000041740.16 ENSMUST00000040555.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 - ENSMUSG00000041740.16 ENSMUST00000112096.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TT ENSMUSG00000041740.16 ENSMUST00000112096.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TTT ENSMUSG00000041740.16 ENSMUST00000112096.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 - ENSMUSG00000041740.16 ENSMUST00000112097.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TT ENSMUSG00000041740.16 ENSMUST00000112097.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TTT ENSMUSG00000041740.16 ENSMUST00000112097.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 - ENSMUSG00000041740.16 ENSMUST00000139853.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TT ENSMUSG00000041740.16 ENSMUST00000139853.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TTT ENSMUSG00000041740.16 ENSMUST00000139853.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 - ENSMUSG00000041740.16 ENSMUST00000200923.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=21;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TT ENSMUSG00000041740.16 ENSMUST00000200923.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=21;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115270596_TTTT/-/TT/TTT chr5:115270596-115270599 TTT ENSMUSG00000041740.16 ENSMUST00000200923.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=21;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 - ENSMUSG00000029528.18 ENSMUST00000067268.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 GT ENSMUSG00000029528.18 ENSMUST00000067268.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 - ENSMUSG00000029528.18 ENSMUST00000086523.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 GT ENSMUSG00000029528.18 ENSMUST00000086523.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 - ENSMUSG00000029528.18 ENSMUST00000125007.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4300;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 GT ENSMUSG00000029528.18 ENSMUST00000125007.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4300;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 - ENSMUSG00000029528.18 ENSMUST00000129897.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=350;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 GT ENSMUSG00000029528.18 ENSMUST00000129897.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=350;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 - ENSMUSG00000086849.1 ENSMUST00000149608.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=55;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 GT ENSMUSG00000086849.1 ENSMUST00000149608.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=55;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 - ENSMUSG00000029528.18 ENSMUST00000152156.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 GT ENSMUSG00000029528.18 ENSMUST00000152156.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 - ENSMUSG00000029528.18 ENSMUST00000212819.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115516002_GTGT/-/GT chr5:115516002-115516005 GT ENSMUSG00000029528.18 ENSMUST00000212819.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115734973_TTT/- chr5:115734973-115734975 - ENSMUSG00000041609.16 ENSMUST00000055408.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3352;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115734973_TTT/- chr5:115734973-115734975 - ENSMUSG00000041609.16 ENSMUST00000141950.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115734973_TTT/- chr5:115734973-115734975 - ENSMUSG00000041609.16 ENSMUST00000148840.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3545;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115799867_TCTC/-/TC chr5:115799867-115799870 - ENSMUSG00000083833.4 ENSMUST00000118829.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1807;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_115799867_TCTC/-/TC chr5:115799867-115799870 TC ENSMUSG00000083833.4 ENSMUST00000118829.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1807;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_116711050_CACA/-/CA chr5:116711050-116711053 - ENSMUSG00000106909.1 ENSMUST00000202259.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_116711050_CACA/-/CA chr5:116711050-116711053 CA ENSMUSG00000106909.1 ENSMUST00000202259.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117546049_TTT/-/T chr5:117546049-117546051 - ENSMUSG00000061578.8 ENSMUST00000073347.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117546049_TTT/-/T chr5:117546049-117546051 T ENSMUSG00000061578.8 ENSMUST00000073347.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117546049_TTT/-/T chr5:117546049-117546051 - ENSMUSG00000061578.8 ENSMUST00000180430.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117546049_TTT/-/T chr5:117546049-117546051 T ENSMUSG00000061578.8 ENSMUST00000180430.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 - ENSMUSG00000029361.18 ENSMUST00000086451.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2252;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 AC ENSMUSG00000029361.18 ENSMUST00000086451.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2252;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 - ENSMUSG00000029361.18 ENSMUST00000124194.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 AC ENSMUSG00000029361.18 ENSMUST00000124194.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 - ENSMUSG00000029361.18 ENSMUST00000138579.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 AC ENSMUSG00000029361.18 ENSMUST00000138579.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 - ENSMUSG00000029361.18 ENSMUST00000142742.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1916;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117839931_ACAC/-/AC chr5:117839931-117839934 AC ENSMUSG00000029361.18 ENSMUST00000142742.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1916;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117857140_C/A chr5:117857140 A ENSMUSG00000029361.18 ENSMUST00000086451.11 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117857140_C/A chr5:117857140 A ENSMUSG00000029361.18 ENSMUST00000124194.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117857140_C/A chr5:117857140 A ENSMUSG00000029361.18 ENSMUST00000138579.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_117857140_C/A chr5:117857140 A ENSMUSG00000029361.18 ENSMUST00000142742.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_118661945_A/- chr5:118661945 - ENSMUSG00000018076.12 ENSMUST00000100816.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_118661945_A/- chr5:118661945 - ENSMUSG00000018076.12 ENSMUST00000201010.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_118661945_A/- chr5:118661945 - ENSMUSG00000018076.12 ENSMUST00000201614.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_118831013_ATACAT/- chr5:118831013-118831018 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_119169167_CACACA/- chr5:119169167-119169172 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_120000292_-/AAAAC chr5:120000291-120000292 AAAAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_120001068_GTGT/- chr5:120001068-120001071 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_120328972_GTGT/- chr5:120328972-120328975 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_120437480_AAAAAAAAAAAAAAAAAAAAAAAAA/- chr5:120437480-120437504 - ENSMUSG00000029595.9 ENSMUST00000031591.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120535039_G/- chr5:120535039 - ENSMUSG00000032741.9 ENSMUST00000046426.9 Transcript 3_prime_UTR_variant 3826 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120535039_G/- chr5:120535039 - ENSMUSG00000032754.14 ENSMUST00000068326.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1015;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120535039_G/- chr5:120535039 - ENSMUSG00000032754.14 ENSMUST00000076051.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1019;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120535039_G/- chr5:120535039 - ENSMUSG00000032754.14 ENSMUST00000111889.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1982;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120535039_G/- chr5:120535039 - ENSMUSG00000032754.14 ENSMUST00000111890.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1020;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120555506_ACAC/- chr5:120555506-120555509 - ENSMUSG00000032741.9 ENSMUST00000046426.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120555506_ACAC/- chr5:120555506-120555509 - ENSMUSG00000032741.9 ENSMUST00000200708.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120555506_ACAC/- chr5:120555506-120555509 - ENSMUSG00000106825.1 ENSMUST00000201971.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2467;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 - ENSMUSG00000066867.8 ENSMUST00000100785.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=838;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 ACACAC ENSMUSG00000066867.8 ENSMUST00000100785.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=838;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 - ENSMUSG00000066867.8 ENSMUST00000200786.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2583;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 ACACAC ENSMUSG00000066867.8 ENSMUST00000200786.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2583;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 - ENSMUSG00000107179.1 ENSMUST00000201006.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 ACACAC ENSMUSG00000107179.1 ENSMUST00000201006.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 - ENSMUSG00000066867.8 ENSMUST00000201172.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1053;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_120785385_ACAC/-/ACACAC chr5:120785385-120785388 ACACAC ENSMUSG00000066867.8 ENSMUST00000201172.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1053;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 GT ENSMUSG00000042744.16 ENSMUST00000042614.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 T ENSMUSG00000042744.16 ENSMUST00000042614.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 GT ENSMUSG00000042744.16 ENSMUST00000128514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 T ENSMUSG00000042744.16 ENSMUST00000128514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 GT ENSMUSG00000042744.16 ENSMUST00000148368.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3191;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 T ENSMUSG00000042744.16 ENSMUST00000148368.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3191;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 GT ENSMUSG00000042744.16 ENSMUST00000201669.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121288082_G/GT/T chr5:121288082 T ENSMUSG00000042744.16 ENSMUST00000201669.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121503113_C/T chr5:121503113 T ENSMUSG00000062438.4 ENSMUST00000079368.4 Transcript 5_prime_UTR_variant 323 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121503113_C/T chr5:121503113 T ENSMUSG00000029452.18 ENSMUST00000111795.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121503113_C/T chr5:121503113 T ENSMUSG00000029452.18 ENSMUST00000156080.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121503113_C/T chr5:121503113 T ENSMUSG00000104999.1 ENSMUST00000196484.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=400;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 - ENSMUSG00000029456.12 ENSMUST00000031412.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 AAA ENSMUSG00000029456.12 ENSMUST00000031412.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 - ENSMUSG00000029456.12 ENSMUST00000111770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 AAA ENSMUSG00000029456.12 ENSMUST00000111770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 - ENSMUSG00000029456.12 ENSMUST00000133775.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 AAA ENSMUSG00000029456.12 ENSMUST00000133775.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 - ENSMUSG00000029456.12 ENSMUST00000137231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2172;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121648956_AAAA/-/AAA chr5:121648956-121648959 AAA ENSMUSG00000029456.12 ENSMUST00000137231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2172;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000051950.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042594.16 ENSMUST00000086310.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3502;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042594.16 ENSMUST00000122426.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4864;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042594.16 ENSMUST00000136960.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3342;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000159928.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000160220.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000160462.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000161064.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000161159.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000161433.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=216;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000161836.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=613;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000162327.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000162459.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1195;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042594.16 ENSMUST00000198161.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4166;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000199451.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3090;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121812146_C/G chr5:121812146 G ENSMUSG00000042605.16 ENSMUST00000199864.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121933910_T/C chr5:121933910 C ENSMUSG00000042589.18 ENSMUST00000086317.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121933910_T/C chr5:121933910 C ENSMUSG00000042589.18 ENSMUST00000111752.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121933910_T/C chr5:121933910 C ENSMUSG00000042589.18 ENSMUST00000125267.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121933910_T/C chr5:121933910 C ENSMUSG00000042589.18 ENSMUST00000134326.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_121933910_T/C chr5:121933910 C ENSMUSG00000042589.18 ENSMUST00000154139.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000014080.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000043036.13 ENSMUST00000058960.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3799;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000111750.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000111751.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000123913.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000126006.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000139213.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000146733.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000147178.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1485;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000150535.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000043036.13 ENSMUST00000152389.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3844;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000152744.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000153816.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=310;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000013936.12 ENSMUST00000155612.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122104238_CTCT/- chr5:122104238-122104241 - ENSMUSG00000043036.13 ENSMUST00000198618.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122190332_G/T chr5:122190332 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_122190342_G/T chr5:122190342 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_122412339_AA/- chr5:122412339-122412340 - ENSMUSG00000029465.14 ENSMUST00000196969.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122412339_AA/- chr5:122412339-122412340 - ENSMUSG00000105895.1 ENSMUST00000198417.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1265;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000046073.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000046073.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000086200.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000086200.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000118027.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000118027.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000121739.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000121739.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000123479.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000123479.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000127403.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000127403.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000143273.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4282;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000143273.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4282;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000145082.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4199;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000145082.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4199;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 - ENSMUSG00000029475.17 ENSMUST00000156474.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4096;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_122928373_AGAG/-/AG chr5:122928373-122928376 AG ENSMUSG00000029475.17 ENSMUST00000156474.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4096;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123011707_A/T chr5:123011707 T ENSMUSG00000049686.14 ENSMUST00000051016.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3367;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123011707_A/T chr5:123011707 T ENSMUSG00000049686.14 ENSMUST00000121652.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3367;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123011707_A/T chr5:123011707 T ENSMUSG00000049686.14 ENSMUST00000152213.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3631;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123011707_A/T chr5:123011707 T ENSMUSG00000105311.1 ENSMUST00000172729.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123011707_A/T chr5:123011707 T ENSMUSG00000106555.4 ENSMUST00000173312.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123011707_A/T chr5:123011707 T ENSMUSG00000106555.4 ENSMUST00000173670.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123016720_A/C chr5:123016720 C ENSMUSG00000049686.14 ENSMUST00000051016.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123016720_A/C chr5:123016720 C ENSMUSG00000049686.14 ENSMUST00000121652.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123016720_A/C chr5:123016720 C ENSMUSG00000049686.14 ENSMUST00000152213.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123016720_A/C chr5:123016720 C ENSMUSG00000105311.1 ENSMUST00000172729.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3846;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123016720_A/C chr5:123016720 C ENSMUSG00000106555.4 ENSMUST00000173312.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1640;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123016720_A/C chr5:123016720 C ENSMUSG00000106555.4 ENSMUST00000173670.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3842;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123229674_-/GT chr5:123229673-123229674 GT ENSMUSG00000029440.15 ENSMUST00000100729.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123229674_-/GT chr5:123229673-123229674 GT ENSMUSG00000029440.15 ENSMUST00000133386.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123229674_-/GT chr5:123229673-123229674 GT ENSMUSG00000097213.1 ENSMUST00000181022.1 Transcript non_coding_transcript_exon_variant 1198-1199 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123229674_-/GT chr5:123229673-123229674 GT ENSMUSG00000029440.15 ENSMUST00000196137.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=642;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123229674_-/GT chr5:123229673-123229674 GT ENSMUSG00000029440.15 ENSMUST00000197809.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4920;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123229674_-/GT chr5:123229673-123229674 GT ENSMUSG00000029440.15 ENSMUST00000199260.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123229674_-/GT chr5:123229673-123229674 GT ENSMUSG00000029440.15 ENSMUST00000200560.1 Transcript non_coding_transcript_exon_variant 727-728 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 T ENSMUSG00000029442.18 ENSMUST00000121964.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 AA ENSMUSG00000029442.18 ENSMUST00000121964.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 T ENSMUSG00000029442.18 ENSMUST00000143629.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 AA ENSMUSG00000029442.18 ENSMUST00000143629.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 T ENSMUSG00000029442.18 ENSMUST00000163092.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 AA ENSMUSG00000029442.18 ENSMUST00000163092.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 T ENSMUSG00000029442.18 ENSMUST00000170536.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 AA ENSMUSG00000029442.18 ENSMUST00000170536.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 T ENSMUSG00000029442.18 ENSMUST00000197763.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 AA ENSMUSG00000029442.18 ENSMUST00000197763.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 T ENSMUSG00000029442.18 ENSMUST00000200666.1 Transcript non_coding_transcript_exon_variant 1458-? - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123279585_TA/T/AA chr5:123279585-123279586 AA ENSMUSG00000029442.18 ENSMUST00000200666.1 Transcript non_coding_transcript_exon_variant 1458-? - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123462472_C/T chr5:123462472 T ENSMUSG00000038342.15 ENSMUST00000068237.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4540;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123462472_C/T chr5:123462472 T ENSMUSG00000082532.1 ENSMUST00000119959.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4037;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123462472_C/T chr5:123462472 T ENSMUSG00000038342.15 ENSMUST00000135961.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4543;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_123761897_GTGT/- chr5:123761897-123761900 - ENSMUSG00000029414.11 ENSMUST00000031366.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124565505_C/A chr5:124565505 A ENSMUSG00000029388.14 ENSMUST00000031334.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4708;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124565505_C/A chr5:124565505 A ENSMUSG00000029389.17 ENSMUST00000071057.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124565505_C/A chr5:124565505 A ENSMUSG00000029389.17 ENSMUST00000111438.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124565505_C/A chr5:124565505 A ENSMUSG00000029389.17 ENSMUST00000131631.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124565505_C/A chr5:124565505 A ENSMUSG00000029389.17 ENSMUST00000136067.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4777;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124565505_C/A chr5:124565505 A ENSMUSG00000029389.17 ENSMUST00000142451.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124565505_C/A chr5:124565505 A ENSMUSG00000029389.17 ENSMUST00000144433.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4721;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_124962088_GG/- chr5:124962088-124962089 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_125136091_ACAC/-/AC chr5:125136091-125136094 - ENSMUSG00000029478.16 ENSMUST00000086083.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 AC ENSMUSG00000029478.16 ENSMUST00000086083.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 - ENSMUSG00000029478.16 ENSMUST00000111393.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 AC ENSMUSG00000029478.16 ENSMUST00000111393.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 - ENSMUSG00000029478.16 ENSMUST00000111394.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 AC ENSMUSG00000029478.16 ENSMUST00000111394.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 - ENSMUSG00000029478.16 ENSMUST00000111398.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 AC ENSMUSG00000029478.16 ENSMUST00000111398.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 - ENSMUSG00000029478.16 ENSMUST00000111402.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125136091_ACAC/-/AC chr5:125136091-125136094 AC ENSMUSG00000029478.16 ENSMUST00000111402.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125558368_C/A chr5:125558368 A ENSMUSG00000070498.3 ENSMUST00000031446.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_125558368_C/A chr5:125558368 A ENSMUSG00000070498.3 ENSMUST00000185104.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_126024701_A/T chr5:126024701 T ENSMUSG00000105189.1 ENSMUST00000200064.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_126369130_A/G chr5:126369130 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_126369167_A/G chr5:126369167 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_126369338_G/A chr5:126369338 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_126369375_G/A chr5:126369375 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_126643764_-/GGAGGA chr5:126643763-126643764 GGAGGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_126838384_G/T chr5:126838384 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_127335976_TGTG/- chr5:127335976-127335979 - ENSMUSG00000034324.16 ENSMUST00000119026.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_127433100_-/AGAT chr5:127433099-127433100 AGAT ENSMUSG00000034324.16 ENSMUST00000119026.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128156312_AA/- chr5:128156312-128156313 - ENSMUSG00000034310.8 ENSMUST00000044441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128192219_CA/C/AA chr5:128192219-128192220 C ENSMUSG00000034310.8 ENSMUST00000044441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128192219_CA/C/AA chr5:128192219-128192220 AA ENSMUSG00000034310.8 ENSMUST00000044441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128313219_A/T chr5:128313219 T ENSMUSG00000034310.8 ENSMUST00000044441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128790737_C/G chr5:128790737 G ENSMUSG00000029420.12 ENSMUST00000111346.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128790737_C/G chr5:128790737 G ENSMUSG00000029420.12 ENSMUST00000196085.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128790737_C/G chr5:128790737 G ENSMUSG00000029420.12 ENSMUST00000198941.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128790737_C/G chr5:128790737 G ENSMUSG00000029420.12 ENSMUST00000199537.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_128790737_C/G chr5:128790737 G ENSMUSG00000029420.12 ENSMUST00000200470.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_129212144_CACA/-/CA chr5:129212144-129212147 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_129212144_CACA/-/CA chr5:129212144-129212147 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_129217905_TT/- chr5:129217905-129217906 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_129376182_-/AGAT chr5:129376181-129376182 AGAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_129451986_TT/- chr5:129451986-129451987 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_130135820_G/C chr5:130135820 C ENSMUSG00000034118.15 ENSMUST00000040721.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=91;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130135820_G/C chr5:130135820 C ENSMUSG00000034118.15 ENSMUST00000118993.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=91;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130135820_G/C chr5:130135820 C ENSMUSG00000034118.15 ENSMUST00000128335.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=108;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130135820_G/C chr5:130135820 C ENSMUSG00000107216.1 ENSMUST00000201281.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3996;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130284461_G/T chr5:130284461 T ENSMUSG00000056310.14 ENSMUST00000040213.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130284461_G/T chr5:130284461 T ENSMUSG00000056310.14 ENSMUST00000044204.11 Transcript 3_prime_UTR_variant 3773 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130284461_G/T chr5:130284461 T ENSMUSG00000056310.14 ENSMUST00000173375.1 Transcript non_coding_transcript_exon_variant 3773 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130491470_ATATAT/- chr5:130491470-130491475 - ENSMUSG00000060371.12 ENSMUST00000086029.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130491470_ATATAT/- chr5:130491470-130491475 - ENSMUSG00000060371.12 ENSMUST00000111287.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130491470_ATATAT/- chr5:130491470-130491475 - ENSMUSG00000060371.12 ENSMUST00000111288.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130491470_ATATAT/- chr5:130491470-130491475 - ENSMUSG00000060371.12 ENSMUST00000141131.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130491470_ATATAT/- chr5:130491470-130491475 - ENSMUSG00000060371.12 ENSMUST00000202728.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130623147_CACA/- chr5:130623147-130623150 - ENSMUSG00000060371.12 ENSMUST00000086029.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130623147_CACA/- chr5:130623147-130623150 - ENSMUSG00000060371.12 ENSMUST00000111287.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130623147_CACA/- chr5:130623147-130623150 - ENSMUSG00000060371.12 ENSMUST00000111288.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130623147_CACA/- chr5:130623147-130623150 - ENSMUSG00000106849.1 ENSMUST00000201334.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4596;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130746716_ACATAT/- chr5:130746716-130746721 - ENSMUSG00000060371.12 ENSMUST00000086029.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130746716_ACATAT/- chr5:130746716-130746721 - ENSMUSG00000060371.12 ENSMUST00000111287.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_130746716_ACATAT/- chr5:130746716-130746721 - ENSMUSG00000060371.12 ENSMUST00000111288.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131134536_T/A chr5:131134536 A ENSMUSG00000034040.16 ENSMUST00000086023.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131134536_T/A chr5:131134536 A ENSMUSG00000034040.16 ENSMUST00000160609.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131134536_T/A chr5:131134536 A ENSMUSG00000034040.16 ENSMUST00000160807.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131134536_T/A chr5:131134536 A ENSMUSG00000106710.1 ENSMUST00000202871.1 Transcript non_coding_transcript_exon_variant 176 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131568103_TGTGTG/- chr5:131568103-131568108 - ENSMUSG00000029673.17 ENSMUST00000160071.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131568103_TGTGTG/- chr5:131568103-131568108 - ENSMUSG00000029673.17 ENSMUST00000161226.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131568103_TGTGTG/- chr5:131568103-131568108 - ENSMUSG00000029673.17 ENSMUST00000161804.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131568103_TGTGTG/- chr5:131568103-131568108 - ENSMUSG00000029673.17 ENSMUST00000182575.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131568103_TGTGTG/- chr5:131568103-131568108 - ENSMUSG00000029673.17 ENSMUST00000182974.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131899282_A/G chr5:131899282 G ENSMUSG00000029673.17 ENSMUST00000160071.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131899282_A/G chr5:131899282 G ENSMUSG00000029673.17 ENSMUST00000161108.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131899282_A/G chr5:131899282 G ENSMUSG00000029673.17 ENSMUST00000161226.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131899282_A/G chr5:131899282 G ENSMUSG00000029673.17 ENSMUST00000182575.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_131899282_A/G chr5:131899282 G ENSMUSG00000029673.17 ENSMUST00000182974.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132069327_-/A chr5:132069326-132069327 A ENSMUSG00000029673.17 ENSMUST00000071591.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132069327_-/A chr5:132069326-132069327 A ENSMUSG00000029673.17 ENSMUST00000100564.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132069327_-/A chr5:132069326-132069327 A ENSMUSG00000029673.17 ENSMUST00000160135.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132069327_-/A chr5:132069326-132069327 A ENSMUSG00000029673.17 ENSMUST00000161108.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132069327_-/A chr5:132069326-132069327 A ENSMUSG00000029673.17 ENSMUST00000161226.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132069327_-/A chr5:132069326-132069327 A ENSMUSG00000029673.17 ENSMUST00000182575.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132069327_-/A chr5:132069326-132069327 A ENSMUSG00000029673.17 ENSMUST00000182974.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_132623726_TCTC/- chr5:132623726-132623729 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_133211765_TATA/- chr5:133211765-133211768 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_133295066_T/C chr5:133295066 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_133690854_GATA/- chr5:133690854-133690857 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_134107259_CC/- chr5:134107259-134107260 - ENSMUSG00000015944.9 ENSMUST00000016088.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134107259_CC/- chr5:134107259-134107260 - ENSMUSG00000015944.9 ENSMUST00000201013.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134227847_TGTG/- chr5:134227847-134227850 - ENSMUSG00000015950.13 ENSMUST00000016094.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134227847_TGTG/- chr5:134227847-134227850 - ENSMUSG00000015950.13 ENSMUST00000111275.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134227847_TGTG/- chr5:134227847-134227850 - ENSMUSG00000015942.9 ENSMUST00000123941.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3492;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134227847_TGTG/- chr5:134227847-134227850 - ENSMUSG00000015950.13 ENSMUST00000126934.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=37;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134227847_TGTG/- chr5:134227847-134227850 - ENSMUSG00000015950.13 ENSMUST00000139249.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134227847_TGTG/- chr5:134227847-134227850 - ENSMUSG00000015950.13 ENSMUST00000144086.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134227847_TGTG/- chr5:134227847-134227850 - ENSMUSG00000015950.13 ENSMUST00000146354.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_134874387_AC/A/CC chr5:134874387-134874388 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_134874387_AC/A/CC chr5:134874387-134874388 CC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_135271388_TTTTT/-/TTTT chr5:135271388-135271392 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_135271388_TTTTT/-/TTTT chr5:135271388-135271392 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_135341829_C/A chr5:135341829 A ENSMUSG00000040013.11 ENSMUST00000044972.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135341829_C/A chr5:135341829 A ENSMUSG00000040013.11 ENSMUST00000201534.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135341829_C/A chr5:135341829 A ENSMUSG00000040013.11 ENSMUST00000201784.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135341829_C/A chr5:135341829 A ENSMUSG00000040013.11 ENSMUST00000201791.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135464116_CC/- chr5:135464116-135464117 - ENSMUSG00000039959.13 ENSMUST00000060311.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135464116_CC/- chr5:135464116-135464117 - ENSMUSG00000039959.13 ENSMUST00000200898.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135464116_CC/- chr5:135464116-135464117 - ENSMUSG00000039959.13 ENSMUST00000201998.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135464116_CC/- chr5:135464116-135464117 - ENSMUSG00000039959.13 ENSMUST00000202044.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135464116_CC/- chr5:135464116-135464117 - ENSMUSG00000039959.13 ENSMUST00000212301.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135624817_G/A chr5:135624817 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000053906.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000111161.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000111162.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000111163.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000111164.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000142343.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000177559.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135749659_-/AAAG chr5:135749658-135749659 AAAG ENSMUSG00000019178.17 ENSMUST00000178515.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135810935_ACAC/- chr5:135810935-135810938 - ENSMUSG00000039860.19 ENSMUST00000126232.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135810935_ACAC/- chr5:135810935-135810938 - ENSMUSG00000039860.19 ENSMUST00000146038.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135905647_CTCTCT/- chr5:135905647-135905652 - ENSMUSG00000051391.9 ENSMUST00000055808.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2757;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135905647_CTCTCT/- chr5:135905647-135905652 - ENSMUSG00000051391.9 ENSMUST00000198270.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2757;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135983556_TT/-/TTT chr5:135983556-135983557 - ENSMUSG00000004948.12 ENSMUST00000005073.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135983556_TT/-/TTT chr5:135983556-135983557 TTT ENSMUSG00000004948.12 ENSMUST00000005073.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135983556_TT/-/TTT chr5:135983556-135983557 - ENSMUSG00000004948.12 ENSMUST00000131563.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_135983556_TT/-/TTT chr5:135983556-135983557 TTT ENSMUSG00000004948.12 ENSMUST00000131563.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000042135.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000100570.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000125048.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000125247.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4957;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000131353.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2774;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000134509.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000135344.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000140972.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000145294.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000152723.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000088188.1 ENSMUST00000157563.1 Transcript non_coding_transcript_exon_variant 159-? - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136096221_ACCACTGAGCCACGCCCCCAGCCCCTCACTGGGGGATTCTAGGCAGGAGCTCT/- chr5:136096221-136096273 - ENSMUSG00000004952.13 ENSMUST00000199502.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3650;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000004097.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000086220.1 ENSMUST00000148082.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000175918.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000175975.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000176172.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000176216.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000176501.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000176745.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000176778.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136383934_GT/- chr5:136383934-136383935 - ENSMUSG00000029705.17 ENSMUST00000177297.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000004097.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000175918.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000175975.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000176172.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000176216.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000176501.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000176745.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000176778.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000177297.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_136492760_-/ATGG chr5:136492759-136492760 ATGG ENSMUSG00000029705.17 ENSMUST00000177305.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137348147_-/TGTGTGTGTG chr5:137348146-137348147 TGTGTGTGTG ENSMUSG00000029710.15 ENSMUST00000061244.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137348147_-/TGTGTGTGTG chr5:137348146-137348147 TGTGTGTGTG ENSMUSG00000029710.15 ENSMUST00000111054.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2366;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137348147_-/TGTGTGTGTG chr5:137348146-137348147 TGTGTGTGTG ENSMUSG00000029710.15 ENSMUST00000111055.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2025;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137348147_-/TGTGTGTGTG chr5:137348146-137348147 TGTGTGTGTG ENSMUSG00000029710.15 ENSMUST00000144296.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1994;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137348147_-/TGTGTGTGTG chr5:137348146-137348147 TGTGTGTGTG ENSMUSG00000029710.15 ENSMUST00000166239.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2283;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137357131_CACA/- chr5:137357131-137357134 - ENSMUSG00000029710.15 ENSMUST00000061244.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137357131_CACA/- chr5:137357131-137357134 - ENSMUSG00000029710.15 ENSMUST00000111054.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137357131_CACA/- chr5:137357131-137357134 - ENSMUSG00000029710.15 ENSMUST00000111055.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137357131_CACA/- chr5:137357131-137357134 - ENSMUSG00000029710.15 ENSMUST00000144296.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137357131_CACA/- chr5:137357131-137357134 - ENSMUSG00000029710.15 ENSMUST00000166239.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137479310_A/C chr5:137479310 C ENSMUSG00000029711.13 ENSMUST00000031723.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3710;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137479310_A/C chr5:137479310 C ENSMUSG00000029711.13 ENSMUST00000111038.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3710;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137479310_A/C chr5:137479310 C ENSMUSG00000029711.13 ENSMUST00000111039.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3716;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137479310_A/C chr5:137479310 C ENSMUSG00000079173.11 ENSMUST00000117564.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2246;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_137479310_A/C chr5:137479310 C ENSMUSG00000079173.11 ENSMUST00000164178.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2715;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_138855055_C/T chr5:138855055 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_138882625_CACA/- chr5:138882625-138882628 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_138892453_CTGCCTAGAATCCCCCAGTGAGGGGCTGGGGCATGGCTCAGTGATAGAGCCT/- chr5:138892453-138892504 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_139083132_G/A chr5:139083132 A ENSMUSG00000025855.13 ENSMUST00000026973.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083132_G/A chr5:139083132 A ENSMUSG00000025855.13 ENSMUST00000110889.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083132_G/A chr5:139083132 A ENSMUSG00000025855.13 ENSMUST00000110890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083132_G/A chr5:139083132 A ENSMUSG00000025855.13 ENSMUST00000129851.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083132_G/A chr5:139083132 A ENSMUSG00000025855.13 ENSMUST00000141985.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083132_G/A chr5:139083132 A ENSMUSG00000025855.13 ENSMUST00000148002.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083137_T/A chr5:139083137 A ENSMUSG00000025855.13 ENSMUST00000026973.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083137_T/A chr5:139083137 A ENSMUSG00000025855.13 ENSMUST00000110889.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083137_T/A chr5:139083137 A ENSMUSG00000025855.13 ENSMUST00000110890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083137_T/A chr5:139083137 A ENSMUSG00000025855.13 ENSMUST00000129851.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083137_T/A chr5:139083137 A ENSMUSG00000025855.13 ENSMUST00000141985.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139083137_T/A chr5:139083137 A ENSMUSG00000025855.13 ENSMUST00000148002.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139523255_A/C chr5:139523255 C ENSMUSG00000106056.1 ENSMUST00000198000.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=494;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139550306_-/TT chr5:139550305-139550306 TT ENSMUSG00000029546.12 ENSMUST00000172997.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2126;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139651439_GTGT/-/GT chr5:139651439-139651442 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_139651439_GTGT/-/GT chr5:139651439-139651442 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_139954246_TGTG/-/TG chr5:139954246-139954249 - ENSMUSG00000048988.8 ENSMUST00000050519.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139954246_TGTG/-/TG chr5:139954246-139954249 TG ENSMUSG00000048988.8 ENSMUST00000050519.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139954246_TGTG/-/TG chr5:139954246-139954249 - ENSMUSG00000048988.8 ENSMUST00000198608.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_139954246_TGTG/-/TG chr5:139954246-139954249 TG ENSMUSG00000048988.8 ENSMUST00000198608.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_140388382_CACA/-/CA chr5:140388382-140388385 - ENSMUSG00000029560.12 ENSMUST00000031539.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_140388382_CACA/-/CA chr5:140388382-140388385 CA ENSMUSG00000029560.12 ENSMUST00000031539.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_140388382_CACA/-/CA chr5:140388382-140388385 - ENSMUSG00000029560.12 ENSMUST00000196020.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_140388382_CACA/-/CA chr5:140388382-140388385 CA ENSMUSG00000029560.12 ENSMUST00000196020.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_141001855_C/T chr5:141001855 T ENSMUSG00000036526.8 ENSMUST00000085786.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1273;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_141001855_C/T chr5:141001855 T ENSMUSG00000036526.8 ENSMUST00000199091.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1384;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_142340814_ACAC/-/AC chr5:142340814-142340817 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_142340814_ACAC/-/AC chr5:142340814-142340817 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_142393650_CCCCAGCCCCTCACTGGGTGATTCTAGGCAGGGGCTCTACCACTGAGCCACA/- chr5:142393650-142393701 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_142677360_-/AGAA chr5:142677359-142677360 AGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 - ENSMUSG00000045078.12 ENSMUST00000053498.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 TTT ENSMUSG00000045078.12 ENSMUST00000053498.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 - ENSMUSG00000045078.12 ENSMUST00000197296.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 TTT ENSMUSG00000045078.12 ENSMUST00000197296.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 - ENSMUSG00000045078.12 ENSMUST00000200430.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 TTT ENSMUSG00000045078.12 ENSMUST00000200430.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 - ENSMUSG00000045078.12 ENSMUST00000200607.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143001982_TTTT/-/TTT chr5:143001982-143001985 TTT ENSMUSG00000045078.12 ENSMUST00000200607.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143966973_-/C chr5:143966972-143966973 C ENSMUSG00000075569.10 ENSMUST00000166847.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143966973_-/C chr5:143966972-143966973 C ENSMUSG00000091351.1 ENSMUST00000167009.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143966973_-/C chr5:143966972-143966973 C ENSMUSG00000075569.10 ENSMUST00000212711.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143982343_ACAC/- chr5:143982343-143982346 - ENSMUSG00000075569.10 ENSMUST00000164604.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143982343_ACAC/- chr5:143982343-143982346 - ENSMUSG00000075569.10 ENSMUST00000166847.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143982343_ACAC/- chr5:143982343-143982346 - ENSMUSG00000091351.1 ENSMUST00000167009.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1352;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_143982343_ACAC/- chr5:143982343-143982346 - ENSMUSG00000075569.10 ENSMUST00000212711.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_144003479_TGTGTG/-/TG/TGTG chr5:144003479-144003484 - ENSMUSG00000029617.10 ENSMUST00000031621.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_144003479_TGTGTG/-/TG/TGTG chr5:144003479-144003484 TG ENSMUSG00000029617.10 ENSMUST00000031621.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_144003479_TGTGTG/-/TG/TGTG chr5:144003479-144003484 TGTG ENSMUSG00000029617.10 ENSMUST00000031621.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_144003479_TGTGTG/-/TG/TGTG chr5:144003479-144003484 - ENSMUSG00000029617.10 ENSMUST00000200669.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_144003479_TGTGTG/-/TG/TGTG chr5:144003479-144003484 TG ENSMUSG00000029617.10 ENSMUST00000200669.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_144003479_TGTGTG/-/TG/TGTG chr5:144003479-144003484 TGTG ENSMUSG00000029617.10 ENSMUST00000200669.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_144182164_AAAA/- chr5:144182164-144182167 - ENSMUSG00000038970.7 ENSMUST00000041804.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_145260246_ACACACACACACACACACACAGACACACACACACTGACAAATGCCCCAAACAGACACAA/- chr5:145260246-145260304 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_145376448_-/AC chr5:145376447-145376448 AC ENSMUSG00000070419.11 ENSMUST00000079268.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_145376448_-/AC chr5:145376447-145376448 AC ENSMUSG00000070419.11 ENSMUST00000174696.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_145586123_G/- chr5:145586123 - ENSMUSG00000075552.4 ENSMUST00000075837.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1393;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_145780285_T/C chr5:145780285 C ENSMUSG00000054417.5 ENSMUST00000067479.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_145780294_C/T chr5:145780294 T ENSMUSG00000054417.5 ENSMUST00000067479.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_146895842_T/C chr5:146895842 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_147112671_GCTCACACCAACGGCTCACACTGATGGCTCGCTCACACTGATGGCTCACACCGACGGCTCACACCGACGGCTC/- chr5:147112671-147112743 - ENSMUSG00000029642.11 ENSMUST00000110557.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1310;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_147112671_GCTCACACCAACGGCTCACACTGATGGCTCGCTCACACTGATGGCTCACACCGACGGCTCACACCGACGGCTC/- chr5:147112671-147112743 - ENSMUSG00000029642.11 ENSMUST00000196288.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1685;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_147112671_GCTCACACCAACGGCTCACACTGATGGCTCGCTCACACTGATGGCTCACACCGACGGCTCACACCGACGGCTC/- chr5:147112671-147112743 - ENSMUSG00000029642.11 ENSMUST00000200993.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1074;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_147112671_GCTCACACCAACGGCTCACACTGATGGCTCGCTCACACTGATGGCTCACACCGACGGCTCACACCGACGGCTC/- chr5:147112671-147112743 - ENSMUSG00000029642.11 ENSMUST00000201007.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1801;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_147112671_GCTCACACCAACGGCTCACACTGATGGCTCGCTCACACTGATGGCTCACACCGACGGCTCACACCGACGGCTC/- chr5:147112671-147112743 - ENSMUSG00000029642.11 ENSMUST00000202444.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1097;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_147738685_G/A chr5:147738685 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_148002585_GTGT/-/GT chr5:148002585-148002588 - ENSMUSG00000029651.16 ENSMUST00000085558.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148002585_GTGT/-/GT chr5:148002585-148002588 GT ENSMUSG00000029651.16 ENSMUST00000085558.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148002585_GTGT/-/GT chr5:148002585-148002588 - ENSMUSG00000029651.16 ENSMUST00000129092.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148002585_GTGT/-/GT chr5:148002585-148002588 GT ENSMUSG00000029651.16 ENSMUST00000129092.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148835506_TT/- chr5:148835506-148835507 - ENSMUSG00000087647.2 ENSMUST00000136919.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 - ENSMUSG00000041298.15 ENSMUST00000047257.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 A ENSMUSG00000041298.15 ENSMUST00000047257.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 - ENSMUSG00000041298.15 ENSMUST00000110508.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 A ENSMUSG00000041298.15 ENSMUST00000110508.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 - ENSMUSG00000041298.15 ENSMUST00000110509.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4883;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 A ENSMUSG00000041298.15 ENSMUST00000110509.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4883;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 - ENSMUSG00000106892.1 ENSMUST00000147473.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4959;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148888815_AA/-/A chr5:148888815-148888816 A ENSMUSG00000106892.1 ENSMUST00000147473.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4959;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000085237.2 ENSMUST00000133694.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000087272.1 ENSMUST00000135240.1 Transcript non_coding_transcript_exon_variant 145 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000106892.1 ENSMUST00000147473.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000085237.2 ENSMUST00000202229.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000108207.2 ENSMUST00000203249.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000108207.2 ENSMUST00000203662.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000108207.2 ENSMUST00000203691.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000108207.2 ENSMUST00000203736.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2925;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000108207.2 ENSMUST00000204570.1 Transcript non_coding_transcript_exon_variant 283 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000108207.2 ENSMUST00000204589.1 Transcript non_coding_transcript_exon_variant 259 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_148959422_C/T chr5:148959422 T ENSMUSG00000108207.2 ENSMUST00000204809.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4520;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_149023199_-/AAGA chr5:149023198-149023199 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_149839441_TGTG/- chr5:149839441-149839444 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr5_150445600_CCTAAGCACACTGTGGTGATTGACAGGGGTGTGGGAAAGCCTGGGGACTTCTCCAATGGCTAGGGGTTCTGTTTCCCGC/- chr5:150445600-150445678 - ENSMUSG00000056602.11 ENSMUST00000087204.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150445600_CCTAAGCACACTGTGGTGATTGACAGGGGTGTGGGAAAGCCTGGGGACTTCTCCAATGGCTAGGGGTTCTGTTTCCCGC/- chr5:150445600-150445678 - ENSMUSG00000107262.1 ENSMUST00000201000.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1104;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150445600_CCTAAGCACACTGTGGTGATTGACAGGGGTGTGGGAAAGCCTGGGGACTTCTCCAATGGCTAGGGGTTCTGTTTCCCGC/- chr5:150445600-150445678 - ENSMUSG00000056602.11 ENSMUST00000202566.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 - ENSMUSG00000056602.11 ENSMUST00000087204.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 TTT ENSMUSG00000056602.11 ENSMUST00000087204.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 - ENSMUSG00000056602.11 ENSMUST00000200863.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 TTT ENSMUSG00000056602.11 ENSMUST00000200863.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 - ENSMUSG00000056602.11 ENSMUST00000201196.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 TTT ENSMUSG00000056602.11 ENSMUST00000201196.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 - ENSMUSG00000056602.11 ENSMUST00000202070.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2169;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 TTT ENSMUSG00000056602.11 ENSMUST00000202070.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2169;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 - ENSMUSG00000056602.11 ENSMUST00000202566.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150466498_TT/-/TTT chr5:150466498-150466499 TTT ENSMUSG00000056602.11 ENSMUST00000202566.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150974099_ACACAC/- chr5:150974099-150974104 - ENSMUSG00000058488.7 ENSMUST00000078856.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_150974099_ACACAC/- chr5:150974099-150974104 - ENSMUSG00000058488.7 ENSMUST00000202096.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_151280336_TGTGTG/- chr5:151280336-151280341 - ENSMUSG00000107154.1 ENSMUST00000201227.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=782;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_151280336_TGTGTG/- chr5:151280336-151280341 - ENSMUSG00000107011.1 ENSMUST00000202365.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr5_151292230_A/C chr5:151292230 C ENSMUSG00000107011.1 ENSMUST00000202365.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3113953_G/A chr6:3113953 A ENSMUSG00000107380.1 ENSMUST00000202526.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1089;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3113957_G/A chr6:3113957 A ENSMUSG00000107380.1 ENSMUST00000202526.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1093;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3153577_C/G chr6:3153577 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_3207411_T/C chr6:3207411 C ENSMUSG00000107601.1 ENSMUST00000203560.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=458;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3207430_G/A chr6:3207430 A ENSMUSG00000107601.1 ENSMUST00000203560.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=439;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3337169_CC/AA chr6:3337169-3337170 AA ENSMUSG00000107222.1 ENSMUST00000200927.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2211;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3337169_CC/AA chr6:3337169-3337170 AA ENSMUSG00000107215.1 ENSMUST00000201493.1 Transcript non_coding_transcript_exon_variant 2185-2186 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3337169_CC/AA chr6:3337169-3337170 AA ENSMUSG00000106734.3 ENSMUST00000201831.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3337169_CC/AA chr6:3337169-3337170 AA ENSMUSG00000106734.3 ENSMUST00000201976.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3337169_CC/AA chr6:3337169-3337170 AA ENSMUSG00000106734.3 ENSMUST00000202696.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4101;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_3777360_T/A/TA chr6:3777360 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_3777360_T/A/TA chr6:3777360 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_3814114_G/T chr6:3814114 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_3854699_T/C chr6:3854699 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_4356947_AGAG/-/AGAGAGAG chr6:4356947-4356950 - ENSMUSG00000098779.2 ENSMUST00000184045.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2078;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4356947_AGAG/-/AGAGAGAG chr6:4356947-4356950 AGAGAGAG ENSMUSG00000098779.2 ENSMUST00000184045.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2078;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4512861_A/C chr6:4512861 C ENSMUSG00000029661.16 ENSMUST00000031668.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4512861_A/C chr6:4512861 C ENSMUSG00000029661.16 ENSMUST00000132029.1 Transcript non_coding_transcript_exon_variant 1531 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4512861_A/C chr6:4512861 C ENSMUSG00000029661.16 ENSMUST00000138511.7 Transcript non_coding_transcript_exon_variant 882 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4512861_A/C chr6:4512861 C ENSMUSG00000029661.16 ENSMUST00000141483.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4512861_A/C chr6:4512861 C ENSMUSG00000107603.1 ENSMUST00000204296.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4983;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4762504_G/A chr6:4762504 A ENSMUSG00000092035.8 ENSMUST00000166678.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1990;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4762504_G/A chr6:4762504 A ENSMUSG00000092035.8 ENSMUST00000176204.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1987;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_4762504_G/A chr6:4762504 A ENSMUSG00000092035.8 ENSMUST00000176551.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1987;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_5314909_AA/-/A chr6:5314909-5314910 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_5314909_AA/-/A chr6:5314909-5314910 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_6922453_GTGT/- chr6:6922453-6922456 - ENSMUSG00000065770.1 ENSMUST00000083836.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1662;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_7455939_AA/- chr6:7455939-7455940 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_7499099_-/AGAAA chr6:7499098-7499099 AGAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_8181737_-/AAAG chr6:8181736-8181737 AAAG ENSMUSG00000068794.7 ENSMUST00000115537.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8181737_-/AAAG chr6:8181736-8181737 AAAG ENSMUSG00000068794.7 ENSMUST00000213284.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1562;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8454737_AA/- chr6:8454737-8454738 - ENSMUSG00000089862.8 ENSMUST00000159335.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8454737_AA/- chr6:8454737-8454738 - ENSMUSG00000107705.1 ENSMUST00000162564.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8555615_ACAC/- chr6:8555615-8555618 - ENSMUSG00000029638.17 ENSMUST00000064285.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8555615_ACAC/- chr6:8555615-8555618 - ENSMUSG00000029638.17 ENSMUST00000161217.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8555615_ACAC/- chr6:8555615-8555618 - ENSMUSG00000029638.17 ENSMUST00000161494.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8555615_ACAC/- chr6:8555615-8555618 - ENSMUSG00000029638.17 ENSMUST00000162383.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8555615_ACAC/- chr6:8555615-8555618 - ENSMUSG00000107705.1 ENSMUST00000162564.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8555615_ACAC/- chr6:8555615-8555618 - ENSMUSG00000029638.17 ENSMUST00000162567.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_8925933_G/A chr6:8925933 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_9015930_A/T chr6:9015930 T ENSMUSG00000046178.3 ENSMUST00000060369.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_9015930_A/T chr6:9015930 T ENSMUSG00000046178.3 ENSMUST00000160300.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_9626868_-/G chr6:9626867-9626868 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_9906038_TATATA/- chr6:9906038-9906043 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_9929153_-/CTTT chr6:9929152-9929153 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_10005707_ATAT/- chr6:10005707-10005710 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_10081805_A/- chr6:10081805 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_10224547_AA/- chr6:10224547-10224548 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_10444999_C/T chr6:10444999 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_11021122_-/AGAAAGAA chr6:11021121-11021122 AGAAAGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_11451157_C/T chr6:11451157 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_11689546_T/C chr6:11689546 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_11689552_A/C chr6:11689552 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_12605114_GAGA/-/GA chr6:12605114-12605117 - ENSMUSG00000032625.14 ENSMUST00000119581.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12605114_GAGA/-/GA chr6:12605114-12605117 GA ENSMUSG00000032625.14 ENSMUST00000119581.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12605114_GAGA/-/GA chr6:12605114-12605117 - ENSMUSG00000032625.14 ENSMUST00000172356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12605114_GAGA/-/GA chr6:12605114-12605117 GA ENSMUSG00000032625.14 ENSMUST00000172356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12605114_GAGA/-/GA chr6:12605114-12605117 - ENSMUSG00000107422.1 ENSMUST00000203511.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3879;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12605114_GAGA/-/GA chr6:12605114-12605117 GA ENSMUSG00000107422.1 ENSMUST00000203511.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3879;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12712353_TATATA/- chr6:12712353-12712358 - ENSMUSG00000032625.14 ENSMUST00000119581.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12712353_TATATA/- chr6:12712353-12712358 - ENSMUSG00000032625.14 ENSMUST00000172356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_12869308_A/G chr6:12869308 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_13010523_AA/-/AAA chr6:13010523-13010524 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_13010523_AA/-/AAA chr6:13010523-13010524 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_14116766_ACAC/-/AC chr6:14116766-14116769 - ENSMUSG00000088975.1 ENSMUST00000158350.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3335;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_14116766_ACAC/-/AC chr6:14116766-14116769 AC ENSMUSG00000088975.1 ENSMUST00000158350.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3335;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_14116906_TT/- chr6:14116906-14116907 - ENSMUSG00000088975.1 ENSMUST00000158350.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3475;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_14654799_G/A chr6:14654799 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_15540181_TTTT/- chr6:15540181-15540184 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_16136734_TTT/- chr6:16136734-16136736 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_16496486_TT/- chr6:16496486-16496487 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_16515063_ACAC/- chr6:16515063-16515066 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_16858909_C/T chr6:16858909 T ENSMUSG00000029553.10 ENSMUST00000031533.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_16858909_C/T chr6:16858909 T ENSMUSG00000029553.10 ENSMUST00000201104.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_16858909_C/T chr6:16858909 T ENSMUSG00000029553.10 ENSMUST00000202997.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_16899074_TATA/- chr6:16899074-16899077 - ENSMUSG00000029553.10 ENSMUST00000031533.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=633;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_16899074_TATA/- chr6:16899074-16899077 - ENSMUSG00000029553.10 ENSMUST00000201104.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=633;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_16899074_TATA/- chr6:16899074-16899077 - ENSMUSG00000029553.10 ENSMUST00000202997.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=675;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_19046186_C/A chr6:19046186 A ENSMUSG00000084650.1 ENSMUST00000122701.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=651;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_19255856_T/G chr6:19255856 G ENSMUSG00000107217.1 ENSMUST00000200755.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_20134263_C/T chr6:20134263 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_20134284_T/A chr6:20134284 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_20266520_GAGA/- chr6:20266520-20266523 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_22215152_TCTC/-/TC chr6:22215152-22215155 - ENSMUSG00000062980.15 ENSMUST00000115383.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_22215152_TCTC/-/TC chr6:22215152-22215155 TC ENSMUSG00000062980.15 ENSMUST00000115383.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_22215152_TCTC/-/TC chr6:22215152-22215155 - ENSMUSG00000062980.15 ENSMUST00000137437.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_22215152_TCTC/-/TC chr6:22215152-22215155 TC ENSMUSG00000062980.15 ENSMUST00000137437.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_22378204_-/TATA chr6:22378203-22378204 TATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_22386035_-/CTTT chr6:22386034-22386035 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_22463950_A/G chr6:22463950 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_22496995_C/T chr6:22496995 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_22779610_G/C chr6:22779610 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000018122.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000069074.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000115356.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000115358.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000115361.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000125350.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000142913.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000163871.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23511367_G/A chr6:23511367 A ENSMUSG00000017978.18 ENSMUST00000166458.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000018122.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000069074.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000115355.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000115356.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000115358.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000115361.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000136279.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000142913.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000163871.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23769869_C/T chr6:23769869 T ENSMUSG00000017978.18 ENSMUST00000166458.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_23867902_-/ATATAT chr6:23867901-23867902 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_24254254_T/G chr6:24254254 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_24375900_-/AAAAAAAAAAAAAAAA chr6:24375899-24375900 AAAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_24409536_TCTC/-/TC chr6:24409536-24409539 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_24409536_TCTC/-/TC chr6:24409536-24409539 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_25805587_GTGT/- chr6:25805587-25805590 - ENSMUSG00000029676.15 ENSMUST00000115327.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_25805587_GTGT/- chr6:25805587-25805590 - ENSMUSG00000029676.15 ENSMUST00000115329.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_25805587_GTGT/- chr6:25805587-25805590 - ENSMUSG00000029676.15 ENSMUST00000115330.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_25805587_GTGT/- chr6:25805587-25805590 - ENSMUSG00000029676.15 ENSMUST00000136089.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_25805587_GTGT/- chr6:25805587-25805590 - ENSMUSG00000029676.15 ENSMUST00000147970.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4189;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_25805587_GTGT/- chr6:25805587-25805590 - ENSMUSG00000029676.15 ENSMUST00000151186.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_25805587_GTGT/- chr6:25805587-25805590 - ENSMUSG00000029676.15 ENSMUST00000156985.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_26552487_TTT/-/TTTT chr6:26552487-26552489 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_26552487_TTT/-/TTTT chr6:26552487-26552489 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_26834633_C/T chr6:26834633 T ENSMUSG00000106742.1 ENSMUST00000201073.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3475;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_26834656_A/G chr6:26834656 G ENSMUSG00000106742.1 ENSMUST00000201073.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3498;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27637717_C/T chr6:27637717 T ENSMUSG00000024211.15 ENSMUST00000090512.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27637717_C/T chr6:27637717 T ENSMUSG00000024211.15 ENSMUST00000115323.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27637717_C/T chr6:27637717 T ENSMUSG00000024211.15 ENSMUST00000115324.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27637744_A/G chr6:27637744 G ENSMUSG00000024211.15 ENSMUST00000090512.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27637744_A/G chr6:27637744 G ENSMUSG00000024211.15 ENSMUST00000115323.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27637744_A/G chr6:27637744 G ENSMUSG00000024211.15 ENSMUST00000115324.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27926937_-/AGAT chr6:27926936-27926937 AGAT ENSMUSG00000024211.15 ENSMUST00000090512.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27926937_-/AGAT chr6:27926936-27926937 AGAT ENSMUSG00000024211.15 ENSMUST00000115323.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27926937_-/AGAT chr6:27926936-27926937 AGAT ENSMUSG00000024211.15 ENSMUST00000115324.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_27926937_-/AGAT chr6:27926936-27926937 AGAT ENSMUSG00000024211.15 ENSMUST00000131897.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28286431_AA/- chr6:28286431-28286432 - ENSMUSG00000039841.14 ENSMUST00000035930.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28448554_AAAAAAAAAAA/- chr6:28448554-28448564 - ENSMUSG00000029706.15 ENSMUST00000031718.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28448554_AAAAAAAAAAA/- chr6:28448554-28448564 - ENSMUSG00000029706.15 ENSMUST00000164519.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28448554_AAAAAAAAAAA/- chr6:28448554-28448564 - ENSMUSG00000029706.15 ENSMUST00000171089.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28448554_AAAAAAAAAAA/- chr6:28448554-28448564 - ENSMUSG00000029706.15 ENSMUST00000174036.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1374;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28448554_AAAAAAAAAAA/- chr6:28448554-28448564 - ENSMUSG00000029706.15 ENSMUST00000174194.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1374;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28448554_AAAAAAAAAAA/- chr6:28448554-28448564 - ENSMUSG00000029706.15 ENSMUST00000174423.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2179;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28486925_GTGT/- chr6:28486925-28486928 - ENSMUSG00000001424.14 ENSMUST00000001460.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28486925_GTGT/- chr6:28486925-28486928 - ENSMUSG00000001424.14 ENSMUST00000164915.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28486925_GTGT/- chr6:28486925-28486928 - ENSMUSG00000001424.14 ENSMUST00000167201.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28486925_GTGT/- chr6:28486925-28486928 - ENSMUSG00000001424.14 ENSMUST00000168362.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_28486925_GTGT/- chr6:28486925-28486928 - ENSMUSG00000001424.14 ENSMUST00000183161.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4077;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000029769.16 ENSMUST00000096084.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=415;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000029769.16 ENSMUST00000115275.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=360;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000029769.16 ENSMUST00000132232.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=39;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000029769.16 ENSMUST00000145310.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=373;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000092956.1 ENSMUST00000175215.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=347;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000029769.16 ENSMUST00000180829.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2656;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000029769.16 ENSMUST00000181464.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2656;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29396270_C/- chr6:29396270 - ENSMUSG00000104796.1 ENSMUST00000196017.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1164;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000096084.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000115275.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000127611.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1309;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000143599.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3777;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000145310.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000154619.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000180829.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000181464.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29411172_GTGT/- chr6:29411172-29411175 - ENSMUSG00000029769.16 ENSMUST00000202726.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29747681_GTGCTGTGCTGTGCTGTG/- chr6:29747681-29747698 - ENSMUSG00000001761.7 ENSMUST00000001812.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29747681_GTGCTGTGCTGTGCTGTG/- chr6:29747681-29747698 - ENSMUSG00000081564.1 ENSMUST00000119868.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3063;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29982743_T/A chr6:29982743 A ENSMUSG00000045709.10 ENSMUST00000124522.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2586;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_29982743_T/A chr6:29982743 A ENSMUSG00000045709.10 ENSMUST00000141679.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2588;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30245414_AAAA/- chr6:30245414-30245417 - ENSMUSG00000039159.16 ENSMUST00000094543.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30245414_AAAA/- chr6:30245414-30245417 - ENSMUSG00000039159.16 ENSMUST00000102993.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30245414_AAAA/- chr6:30245414-30245417 - ENSMUSG00000039159.16 ENSMUST00000128141.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1611;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30245414_AAAA/- chr6:30245414-30245417 - ENSMUSG00000039159.16 ENSMUST00000148744.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30297685_GTGT/-/GT chr6:30297685-30297688 - ENSMUSG00000039159.16 ENSMUST00000094543.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30297685_GTGT/-/GT chr6:30297685-30297688 GT ENSMUSG00000039159.16 ENSMUST00000094543.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30297685_GTGT/-/GT chr6:30297685-30297688 - ENSMUSG00000039159.16 ENSMUST00000102993.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30297685_GTGT/-/GT chr6:30297685-30297688 GT ENSMUSG00000039159.16 ENSMUST00000102993.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30297685_GTGT/-/GT chr6:30297685-30297688 - ENSMUSG00000039159.16 ENSMUST00000148744.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_30297685_GTGT/-/GT chr6:30297685-30297688 GT ENSMUSG00000039159.16 ENSMUST00000148744.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_31108835_TT/- chr6:31108835-31108836 - ENSMUSG00000087312.1 ENSMUST00000146766.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4189;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_31108835_TT/- chr6:31108835-31108836 - ENSMUSG00000044471.12 ENSMUST00000187876.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_31108835_TT/- chr6:31108835-31108836 - ENSMUSG00000104030.1 ENSMUST00000195672.1 Transcript non_coding_transcript_exon_variant 2085-2086 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_31108835_TT/- chr6:31108835-31108836 - ENSMUSG00000044471.12 ENSMUST00000229711.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_31108835_TT/- chr6:31108835-31108836 - ENSMUSG00000044471.12 ENSMUST00000230832.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_32062385_T/C chr6:32062385 C ENSMUSG00000029766.7 ENSMUST00000031778.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3470;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_32062385_T/C chr6:32062385 C ENSMUSG00000029766.7 ENSMUST00000135066.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3464;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_32062385_T/C chr6:32062385 C ENSMUSG00000029766.7 ENSMUST00000156267.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3764;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_32062385_T/C chr6:32062385 C ENSMUSG00000029766.7 ENSMUST00000201926.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3464;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_33238558_TCTC/- chr6:33238558-33238561 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_33873256_T/A chr6:33873256 A ENSMUSG00000029763.17 ENSMUST00000052266.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_33873256_T/A chr6:33873256 A ENSMUSG00000029763.17 ENSMUST00000134653.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34235658_CACA/- chr6:34235658-34235661 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_34544221_CACA/- chr6:34544221-34544224 - ENSMUSG00000085187.1 ENSMUST00000125185.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2834;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000031775.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000031775.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000079391.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000079391.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000115021.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000115021.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000115026.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000115026.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000115027.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000115027.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000132331.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=410;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000132331.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=410;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000142716.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2419;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000142716.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2419;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000149009.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000149009.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 - ENSMUSG00000029761.16 ENSMUST00000201956.1 Transcript non_coding_transcript_exon_variant 1684-1687 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_34764543_ACAC/-/AC chr6:34764543-34764546 AC ENSMUSG00000029761.16 ENSMUST00000201956.1 Transcript non_coding_transcript_exon_variant 1684-1687 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_35562803_GA/TT chr6:35562803-35562804 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_35777952_G/A chr6:35777952 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_36496975_G/A chr6:36496975 A ENSMUSG00000045613.9 ENSMUST00000172278.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_36603278_-/AAAG chr6:36603277-36603278 AAAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_37085500_GTGT/- chr6:37085500-37085503 - ENSMUSG00000038665.15 ENSMUST00000042075.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37085500_GTGT/- chr6:37085500-37085503 - ENSMUSG00000038665.15 ENSMUST00000090314.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37085500_GTGT/- chr6:37085500-37085503 - ENSMUSG00000038665.15 ENSMUST00000101532.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37085500_GTGT/- chr6:37085500-37085503 - ENSMUSG00000038665.15 ENSMUST00000138286.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37085500_GTGT/- chr6:37085500-37085503 - ENSMUSG00000038665.15 ENSMUST00000150300.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37197444_ACAT/- chr6:37197444-37197447 - ENSMUSG00000038665.15 ENSMUST00000042075.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37197444_ACAT/- chr6:37197444-37197447 - ENSMUSG00000038665.15 ENSMUST00000090314.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37197444_ACAT/- chr6:37197444-37197447 - ENSMUSG00000038665.15 ENSMUST00000101532.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37197444_ACAT/- chr6:37197444-37197447 - ENSMUSG00000038665.15 ENSMUST00000138286.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37197444_ACAT/- chr6:37197444-37197447 - ENSMUSG00000038665.15 ENSMUST00000150300.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_37574933_TT/- chr6:37574933-37574934 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_37711153_AA/- chr6:37711153-37711154 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_37849334_TA/T/AA chr6:37849334-37849335 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_37849334_TA/T/AA chr6:37849334-37849335 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_38164887_CACA/-/CA chr6:38164887-38164890 - ENSMUSG00000063455.16 ENSMUST00000117556.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38164887_CACA/-/CA chr6:38164887-38164890 CA ENSMUSG00000063455.16 ENSMUST00000117556.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38164887_CACA/-/CA chr6:38164887-38164890 - ENSMUSG00000063455.16 ENSMUST00000149557.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38164887_CACA/-/CA chr6:38164887-38164890 CA ENSMUSG00000063455.16 ENSMUST00000149557.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38164887_CACA/-/CA chr6:38164887-38164890 - ENSMUSG00000063455.16 ENSMUST00000152464.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38164887_CACA/-/CA chr6:38164887-38164890 CA ENSMUSG00000063455.16 ENSMUST00000152464.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38164887_CACA/-/CA chr6:38164887-38164890 - ENSMUSG00000063455.16 ENSMUST00000169256.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38164887_CACA/-/CA chr6:38164887-38164890 CA ENSMUSG00000063455.16 ENSMUST00000169256.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38335916_G/T chr6:38335916 T ENSMUSG00000029826.14 ENSMUST00000031850.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38335916_G/T chr6:38335916 T ENSMUSG00000029826.14 ENSMUST00000114898.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38335916_G/T chr6:38335916 T ENSMUSG00000029826.14 ENSMUST00000114900.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38335916_G/T chr6:38335916 T ENSMUSG00000029826.14 ENSMUST00000143702.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 - ENSMUSG00000061436.15 ENSMUST00000159894.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 T ENSMUSG00000061436.15 ENSMUST00000159894.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 - ENSMUSG00000061436.15 ENSMUST00000160360.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 T ENSMUSG00000061436.15 ENSMUST00000160360.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 - ENSMUSG00000061436.15 ENSMUST00000160962.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 T ENSMUSG00000061436.15 ENSMUST00000160962.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 - ENSMUSG00000061436.15 ENSMUST00000161779.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 T ENSMUSG00000061436.15 ENSMUST00000161779.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 - ENSMUSG00000061436.15 ENSMUST00000162359.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_38774320_TT/-/T chr6:38774320-38774321 T ENSMUSG00000061436.15 ENSMUST00000162359.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39093778_CACA/-/CA chr6:39093778-39093781 - ENSMUSG00000038507.6 ENSMUST00000038398.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39093778_CACA/-/CA chr6:39093778-39093781 CA ENSMUSG00000038507.6 ENSMUST00000038398.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39093778_CACA/-/CA chr6:39093778-39093781 - ENSMUSG00000038507.6 ENSMUST00000129916.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2685;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39093778_CACA/-/CA chr6:39093778-39093781 CA ENSMUSG00000038507.6 ENSMUST00000129916.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2685;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39254847_AA/-/A chr6:39254847-39254848 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_39254847_AA/-/A chr6:39254847-39254848 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_39472895_-/C chr6:39472894-39472895 C ENSMUSG00000038456.9 ENSMUST00000036877.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39472895_-/C chr6:39472894-39472895 C ENSMUSG00000038456.9 ENSMUST00000145541.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39472895_-/C chr6:39472894-39472895 C ENSMUSG00000038456.9 ENSMUST00000149162.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39501101_-/AAAAAAAAAAAAAAAAAAAA chr6:39501100-39501101 AAAAAAAAAAAAAAAAAAAA ENSMUSG00000038456.9 ENSMUST00000036877.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39501101_-/AAAAAAAAAAAAAAAAAAAA chr6:39501100-39501101 AAAAAAAAAAAAAAAAAAAA ENSMUSG00000038456.9 ENSMUST00000154149.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_39766633_AA/-/A chr6:39766633-39766634 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_39766633_AA/-/A chr6:39766633-39766634 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_41496556_TGTG/-/TG chr6:41496556-41496559 - ENSMUSG00000102616.1 ENSMUST00000195367.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=370;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_41496556_TGTG/-/TG chr6:41496556-41496559 TG ENSMUSG00000102616.1 ENSMUST00000195367.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=370;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_41496556_TGTG/-/TG chr6:41496556-41496559 - ENSMUSG00000104513.1 ENSMUST00000195856.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1589;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_41496556_TGTG/-/TG chr6:41496556-41496559 TG ENSMUSG00000104513.1 ENSMUST00000195856.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1589;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_41807581_T/A chr6:41807581 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_42037709_-/AGAA chr6:42037708-42037709 AGAA ENSMUSG00000023289.11 ENSMUST00000024059.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=685;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_42037709_-/AGAA chr6:42037708-42037709 AGAA ENSMUSG00000023289.11 ENSMUST00000117406.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=685;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_42122818_T/G chr6:42122818 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_43027146_TGTG/- chr6:43027146-43027149 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_44120705_ACAC/-/AC chr6:44120705-44120708 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_44120705_ACAC/-/AC chr6:44120705-44120708 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_44508919_AGAGAG/-/AGAG chr6:44508919-44508924 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_44508919_AGAGAG/-/AGAG chr6:44508919-44508924 AGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_44643768_T/C chr6:44643768 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_45765739_ACAC/- chr6:45765739-45765742 - ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46400215_-/AC chr6:46400214-46400215 AC ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46400215_-/AC chr6:46400214-46400215 AC ENSMUSG00000039419.17 ENSMUST00000196561.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46544551_AGAG/-/AG chr6:46544551-46544554 - ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46544551_AGAG/-/AG chr6:46544551-46544554 AG ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46572618_A/T chr6:46572618 T ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46577188_A/G chr6:46577188 G ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46577224_A/T chr6:46577224 T ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46649793_ACAC/-/AC chr6:46649793-46649796 - ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_46649793_ACAC/-/AC chr6:46649793-46649796 AC ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_47013044_C/T chr6:47013044 T ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_47102044_T/A chr6:47102044 A ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_47125976_TT/- chr6:47125976-47125977 - ENSMUSG00000039419.17 ENSMUST00000114641.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_47738380_T/C chr6:47738380 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_47743759_G/A chr6:47743759 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_47769879_A/C chr6:47769879 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_48235363_G/A chr6:48235363 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_49229209_T/A chr6:49229209 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_49895901_GAGA/-/GA chr6:49895901-49895904 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_49895901_GAGA/-/GA chr6:49895901-49895904 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_50840124_TGTG/-/TG chr6:50840124-50840127 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_50840124_TGTG/-/TG chr6:50840124-50840127 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_50915586_TTTT/- chr6:50915586-50915589 - ENSMUSG00000107488.1 ENSMUST00000203306.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4851;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_50956361_A/T chr6:50956361 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_51156733_T/C chr6:51156733 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_51525498_TT/-/TTT chr6:51525498-51525499 - ENSMUSG00000038301.15 ENSMUST00000049152.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_51525498_TT/-/TTT chr6:51525498-51525499 TTT ENSMUSG00000038301.15 ENSMUST00000049152.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_51525498_TT/-/TTT chr6:51525498-51525499 - ENSMUSG00000038301.15 ENSMUST00000137212.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_51525498_TT/-/TTT chr6:51525498-51525499 TTT ENSMUSG00000038301.15 ENSMUST00000137212.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_51525498_TT/-/TTT chr6:51525498-51525499 - ENSMUSG00000038301.15 ENSMUST00000140560.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_51525498_TT/-/TTT chr6:51525498-51525499 TTT ENSMUSG00000038301.15 ENSMUST00000140560.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_51525498_TT/-/TTT chr6:51525498-51525499 - ENSMUSG00000038301.15 ENSMUST00000155724.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_51525498_TT/-/TTT chr6:51525498-51525499 TTT ENSMUSG00000038301.15 ENSMUST00000155724.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_52384788_CGTGT/C/TGTGT chr6:52384788-52384792 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_52384788_CGTGT/C/TGTGT chr6:52384788-52384792 TGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_52421043_AGAG/- chr6:52421043-52421046 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_52900146_TT/- chr6:52900146-52900147 - ENSMUSG00000063568.11 ENSMUST00000074541.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_52900146_TT/- chr6:52900146-52900147 - ENSMUSG00000063568.11 ENSMUST00000136250.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53147022_TT/- chr6:53147022-53147023 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_53444130_TGTG/-/TG chr6:53444130-53444133 - ENSMUSG00000053007.9 ENSMUST00000047450.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 TG ENSMUSG00000053007.9 ENSMUST00000047450.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 - ENSMUSG00000053007.9 ENSMUST00000203487.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 TG ENSMUSG00000053007.9 ENSMUST00000203487.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 - ENSMUSG00000053007.9 ENSMUST00000203528.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 TG ENSMUSG00000053007.9 ENSMUST00000203528.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 - ENSMUSG00000053007.9 ENSMUST00000203575.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 TG ENSMUSG00000053007.9 ENSMUST00000203575.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 - ENSMUSG00000053007.9 ENSMUST00000204245.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53444130_TGTG/-/TG chr6:53444130-53444133 TG ENSMUSG00000053007.9 ENSMUST00000204245.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_53851078_TTTT/- chr6:53851078-53851081 - ENSMUSG00000108175.1 ENSMUST00000204648.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000046856.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000067741.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000114401.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000114402.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000086946.7 ENSMUST00000138259.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000086946.7 ENSMUST00000144094.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000073067.10 ENSMUST00000145111.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000146114.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000203091.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000203941.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000204115.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000204746.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54277905_T/A chr6:54277905 A ENSMUSG00000004633.17 ENSMUST00000204921.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54432147_AGAG/- chr6:54432147-54432150 - ENSMUSG00000086040.8 ENSMUST00000126637.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54432147_AGAG/- chr6:54432147-54432150 - ENSMUSG00000086040.8 ENSMUST00000132855.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54432147_AGAG/- chr6:54432147-54432150 - ENSMUSG00000073067.10 ENSMUST00000135612.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2610;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54432147_AGAG/- chr6:54432147-54432150 - ENSMUSG00000073067.10 ENSMUST00000145111.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1926;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_54782811_-/AAAAAAAAAAAAAAA chr6:54782810-54782811 AAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000044505.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000114327.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000164037.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000164752.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000166102.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000166890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000168944.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000170774.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000203372.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000203967.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_56235607_TGTG/- chr6:56235607-56235610 - ENSMUSG00000004347.16 ENSMUST00000204821.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_57750038_TT/-/TTT chr6:57750038-57750039 - ENSMUSG00000037788.14 ENSMUST00000114297.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2226;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_57750038_TT/-/TTT chr6:57750038-57750039 TTT ENSMUSG00000037788.14 ENSMUST00000114297.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2226;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_57750038_TT/-/TTT chr6:57750038-57750039 - ENSMUSG00000037788.14 ENSMUST00000127485.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_57750038_TT/-/TTT chr6:57750038-57750039 TTT ENSMUSG00000037788.14 ENSMUST00000127485.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_57750038_TT/-/TTT chr6:57750038-57750039 - ENSMUSG00000037788.14 ENSMUST00000204878.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4524;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_57750038_TT/-/TTT chr6:57750038-57750039 TTT ENSMUSG00000037788.14 ENSMUST00000204878.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4524;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_58299205_T/- chr6:58299205 - ENSMUSG00000091734.2 ENSMUST00000226971.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_58299205_T/- chr6:58299205 - ENSMUSG00000091734.2 ENSMUST00000227761.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_58299205_T/- chr6:58299205 - ENSMUSG00000091734.2 ENSMUST00000228038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_58299205_T/- chr6:58299205 - ENSMUSG00000091734.2 ENSMUST00000228909.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_58924393_-/TTGTT chr6:58924392-58924393 TTGTT ENSMUSG00000029804.17 ENSMUST00000041401.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3994;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_59064386_TGTG/-/TG chr6:59064386-59064389 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_59064386_TGTG/-/TG chr6:59064386-59064389 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_59081542_-/G chr6:59081541-59081542 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_59812693_AA/- chr6:59812693-59812694 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_60376481_CACA/- chr6:60376481-60376484 - ENSMUSG00000046764.8 ENSMUST00000205153.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_61118374_ACAC/- chr6:61118374-61118377 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_62664582_TGTG/- chr6:62664582-62664585 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_62839326_TGA/T/AGA chr6:62839326-62839328 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_62839326_TGA/T/AGA chr6:62839326-62839328 AGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_63288214_TT/-/TTT chr6:63288214-63288215 - ENSMUSG00000071424.10 ENSMUST00000095852.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 TTT ENSMUSG00000071424.10 ENSMUST00000095852.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 - ENSMUSG00000071424.10 ENSMUST00000159319.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 TTT ENSMUSG00000071424.10 ENSMUST00000159319.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 - ENSMUSG00000071424.10 ENSMUST00000159561.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 TTT ENSMUSG00000071424.10 ENSMUST00000159561.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 - ENSMUSG00000071424.10 ENSMUST00000160408.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 TTT ENSMUSG00000071424.10 ENSMUST00000160408.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 - ENSMUSG00000071424.10 ENSMUST00000161105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63288214_TT/-/TTT chr6:63288214-63288215 TTT ENSMUSG00000071424.10 ENSMUST00000161105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63450071_ATATAC/- chr6:63450071-63450076 - ENSMUSG00000071424.10 ENSMUST00000095852.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63450071_ATATAC/- chr6:63450071-63450076 - ENSMUSG00000071424.10 ENSMUST00000159561.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63450071_ATATAC/- chr6:63450071-63450076 - ENSMUSG00000071424.10 ENSMUST00000160408.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63450071_ATATAC/- chr6:63450071-63450076 - ENSMUSG00000071424.10 ENSMUST00000161105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63701328_G/A chr6:63701328 A ENSMUSG00000071424.10 ENSMUST00000095852.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63701328_G/A chr6:63701328 A ENSMUSG00000071424.10 ENSMUST00000159561.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_63701328_G/A chr6:63701328 A ENSMUSG00000071424.10 ENSMUST00000161105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_64806356_G/A chr6:64806356 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_64806360_G/T chr6:64806360 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_65261462_G/A chr6:65261462 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_65968419_TATA/-/TATATATATATATA chr6:65968419-65968422 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_65968419_TATA/-/TATATATATATATA chr6:65968419-65968422 TATATATATATATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_66323555_AA/-/A chr6:66323555-66323556 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_66323555_AA/-/A chr6:66323555-66323556 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_67433960_AAAA/- chr6:67433960-67433963 - ENSMUSG00000049093.9 ENSMUST00000118364.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_68123411_G/T chr6:68123411 T ENSMUSG00000094335.2 ENSMUST00000103317.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1584;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_68361881_C/T chr6:68361881 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_68629998_GAGAGA/- chr6:68629998-68630003 - ENSMUSG00000094420.2 ENSMUST00000103328.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1960;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_69204464_G/T chr6:69204464 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_69493864_G/- chr6:69493864 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_69567943_GATGGATGGATA/- chr6:69567943-69567954 - ENSMUSG00000105369.1 ENSMUST00000198063.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_70489858_C/A chr6:70489858 A ENSMUSG00000106315.1 ENSMUST00000196813.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3506;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_70489887_G/A chr6:70489887 A ENSMUSG00000106315.1 ENSMUST00000196813.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3477;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_70902690_C/T chr6:70902690 T ENSMUSG00000031668.14 ENSMUST00000034093.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_70902690_C/T chr6:70902690 T ENSMUSG00000031668.14 ENSMUST00000161316.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2432;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_70902873_ACAC/- chr6:70902873-70902876 - ENSMUSG00000031668.14 ENSMUST00000034093.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_70902873_ACAC/- chr6:70902873-70902876 - ENSMUSG00000031668.14 ENSMUST00000161316.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2615;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_71247952_-/TAGA chr6:71247951-71247952 TAGA ENSMUSG00000055027.17 ENSMUST00000074301.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_71247952_-/TAGA chr6:71247951-71247952 TAGA ENSMUSG00000055027.17 ENSMUST00000114186.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_71247952_-/TAGA chr6:71247951-71247952 TAGA ENSMUSG00000055027.17 ENSMUST00000114188.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_71671983_CGCGCGCGCGCGCG/- chr6:71671983-71671996 - ENSMUSG00000108496.1 ENSMUST00000205719.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=99;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_72178472_-/AGAAAGAA chr6:72178471-72178472 AGAAAGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_72294840_ATAT/- chr6:72294840-72294843 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_72334763_A/T chr6:72334763 T ENSMUSG00000056305.4 ENSMUST00000070345.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_72334763_A/T chr6:72334763 T ENSMUSG00000056305.4 ENSMUST00000154799.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1395;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_72334763_A/T chr6:72334763 T ENSMUSG00000056305.4 ENSMUST00000206262.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1497;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_72445696_-/TCTT chr6:72445695-72445696 TCTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_72775603_TT/- chr6:72775603-72775604 - ENSMUSG00000055799.13 ENSMUST00000069536.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_72775603_TT/- chr6:72775603-72775604 - ENSMUSG00000055799.13 ENSMUST00000114053.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_72775603_TT/- chr6:72775603-72775604 - ENSMUSG00000055799.13 ENSMUST00000149446.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_72821363_TT/- chr6:72821363-72821364 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_73037446_ACAC/- chr6:73037446-73037449 - ENSMUSG00000052861.13 ENSMUST00000064948.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_73037446_ACAC/- chr6:73037446-73037449 - ENSMUSG00000052861.13 ENSMUST00000114040.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_73037446_ACAC/- chr6:73037446-73037449 - ENSMUSG00000052861.13 ENSMUST00000204053.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_73124539_ACAC/- chr6:73124539-73124542 - ENSMUSG00000052861.13 ENSMUST00000064948.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_73124539_ACAC/- chr6:73124539-73124542 - ENSMUSG00000052861.13 ENSMUST00000114038.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_73124539_ACAC/- chr6:73124539-73124542 - ENSMUSG00000052861.13 ENSMUST00000114040.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_73124539_ACAC/- chr6:73124539-73124542 - ENSMUSG00000052861.13 ENSMUST00000204053.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_75448583_ATAT/-/AT chr6:75448583-75448586 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_75448583_ATAT/-/AT chr6:75448583-75448586 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_75501244_G/- chr6:75501244 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_76426444_ACAC/- chr6:76426444-76426447 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_78116571_TT/- chr6:78116571-78116572 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_78485548_T/C chr6:78485548 C ENSMUSG00000097940.2 ENSMUST00000182950.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1884;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_78504171_CACACACACACACACA/-/CA/CACACACACACACA chr6:78504171-78504186 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_78504171_CACACACACACACACA/-/CA/CACACACACACACA chr6:78504171-78504186 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_78504171_CACACACACACACACA/-/CA/CACACACACACACA chr6:78504171-78504186 CACACACACACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_78662495_T/G chr6:78662495 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_78701909_-/A chr6:78701908-78701909 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_79273526_CA/TG chr6:79273526-79273527 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_79273531_-/AA chr6:79273530-79273531 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_79326163_-/AGAGAGAGAGAGAG chr6:79326162-79326163 AGAGAGAGAGAGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_79555964_C/A chr6:79555964 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_79818802_AG/- chr6:79818802-79818803 - ENSMUSG00000096887.2 ENSMUST00000179797.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=438;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80069033_TGTG/- chr6:80069033-80069036 - ENSMUSG00000052581.13 ENSMUST00000126399.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80069033_TGTG/- chr6:80069033-80069036 - ENSMUSG00000052581.13 ENSMUST00000133918.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80069033_TGTG/- chr6:80069033-80069036 - ENSMUSG00000052581.13 ENSMUST00000147663.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80099174_T/- chr6:80099174 - ENSMUSG00000052581.13 ENSMUST00000126399.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80099174_T/- chr6:80099174 - ENSMUSG00000052581.13 ENSMUST00000133918.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80099174_T/- chr6:80099174 - ENSMUSG00000052581.13 ENSMUST00000147663.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80155901_ATAT/- chr6:80155901-80155904 - ENSMUSG00000052581.13 ENSMUST00000126399.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80155901_ATAT/- chr6:80155901-80155904 - ENSMUSG00000052581.13 ENSMUST00000133918.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80155901_ATAT/- chr6:80155901-80155904 - ENSMUSG00000052581.13 ENSMUST00000147663.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_80951562_GT/- chr6:80951562-80951563 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_81509317_C/A chr6:81509317 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_82100400_C/A chr6:82100400 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_82180188_C/T chr6:82180188 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_82543602_TT/-/T chr6:82543602-82543603 - ENSMUSG00000030043.11 ENSMUST00000032122.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_82543602_TT/-/T chr6:82543602-82543603 T ENSMUSG00000030043.11 ENSMUST00000032122.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_82543602_TT/-/T chr6:82543602-82543603 - ENSMUSG00000030043.11 ENSMUST00000203775.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_82543602_TT/-/T chr6:82543602-82543603 T ENSMUSG00000030043.11 ENSMUST00000203775.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_82904355_TG/CA chr6:82904355-82904356 CA ENSMUSG00000109076.1 ENSMUST00000208233.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_83890633_-/G chr6:83890632-83890633 G ENSMUSG00000030016.14 ENSMUST00000203273.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_83890633_-/G chr6:83890632-83890633 G ENSMUSG00000030016.14 ENSMUST00000204415.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_84453670_G/T chr6:84453670 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_86331992_CTG/- chr6:86331992-86331994 - ENSMUSG00000072940.5 ENSMUST00000119024.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2037;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87051633_-/A chr6:87051632-87051633 A ENSMUSG00000029992.14 ENSMUST00000032057.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87051633_-/A chr6:87051632-87051633 A ENSMUSG00000029992.14 ENSMUST00000113655.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87051633_-/A chr6:87051632-87051633 A ENSMUSG00000029992.14 ENSMUST00000113657.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87051633_-/A chr6:87051632-87051633 A ENSMUSG00000029992.14 ENSMUST00000113658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87051633_-/A chr6:87051632-87051633 A ENSMUSG00000029992.14 ENSMUST00000150410.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87400511_T/A chr6:87400511 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030060.14 ENSMUST00000032141.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030060.14 ENSMUST00000113606.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030058.17 ENSMUST00000113607.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3734;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030060.14 ENSMUST00000124551.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=595;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030060.14 ENSMUST00000132651.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2326;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030058.17 ENSMUST00000149907.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4799;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000097763.1 ENSMUST00000181696.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2870;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030060.14 ENSMUST00000204232.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917329_A/C chr6:87917329 C ENSMUSG00000030060.14 ENSMUST00000204614.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030060.14 ENSMUST00000032141.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030060.14 ENSMUST00000113606.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030058.17 ENSMUST00000113607.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3738;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030060.14 ENSMUST00000124551.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=591;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030060.14 ENSMUST00000132651.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2330;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030058.17 ENSMUST00000149907.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4803;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000097763.1 ENSMUST00000181696.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2874;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030060.14 ENSMUST00000204232.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_87917333_A/C chr6:87917333 C ENSMUSG00000030060.14 ENSMUST00000204614.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000089449.4 Transcript 3_prime_UTR_variant 1355-1357 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000089449.4 Transcript 3_prime_UTR_variant 1355-1357 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000089449.4 Transcript 3_prime_UTR_variant 1355-1357 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000113581.7 Transcript 3_prime_UTR_variant 1166-1168 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000113581.7 Transcript 3_prime_UTR_variant 1166-1168 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000113581.7 Transcript 3_prime_UTR_variant 1166-1168 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000113582.7 Transcript 3_prime_UTR_variant 971-973 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000113582.7 Transcript 3_prime_UTR_variant 971-973 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000113582.7 Transcript 3_prime_UTR_variant 971-973 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000113585.8 Transcript 3_prime_UTR_variant 1164-1166 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000113585.8 Transcript 3_prime_UTR_variant 1164-1166 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000113585.8 Transcript 3_prime_UTR_variant 1164-1166 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000163271.7 Transcript 3_prime_UTR_variant 1479-1481 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000163271.7 Transcript 3_prime_UTR_variant 1479-1481 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000163271.7 Transcript 3_prime_UTR_variant 1479-1481 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000203608.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2465;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000203608.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2465;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000203608.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2465;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000203824.1 Transcript 3_prime_UTR_variant,NMD_transcript_variant 999-1001 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000203824.1 Transcript 3_prime_UTR_variant,NMD_transcript_variant 999-1001 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000203824.1 Transcript 3_prime_UTR_variant,NMD_transcript_variant 999-1001 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 - ENSMUSG00000033174.17 ENSMUST00000205045.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=15;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AA ENSMUSG00000033174.17 ENSMUST00000205045.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=15;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_88825848_AAA/-/AA/AAAA chr6:88825848-88825850 AAAA ENSMUSG00000033174.17 ENSMUST00000205045.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=15;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90229136_C/T chr6:90229136 T ENSMUSG00000057697.2 ENSMUST00000076086.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4698;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90229136_C/T chr6:90229136 T ENSMUSG00000092247.2 ENSMUST00000173657.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2592;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90229136_C/T chr6:90229136 T ENSMUSG00000092247.2 ENSMUST00000204789.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90581871_A/C chr6:90581871 C ENSMUSG00000030088.15 ENSMUST00000032175.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90581871_A/C chr6:90581871 C ENSMUSG00000030088.15 ENSMUST00000130418.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90581871_A/C chr6:90581871 C ENSMUSG00000030088.15 ENSMUST00000204796.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90976586_-/A chr6:90976585-90976586 A ENSMUSG00000034312.14 ENSMUST00000212100.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_90976587_-/AGA chr6:90976586-90976587 AGA ENSMUSG00000034312.14 ENSMUST00000212100.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91373444_ACAC/- chr6:91373444-91373447 - ENSMUSG00000030093.7 ENSMUST00000032180.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91437696_AGAGAGGTCGAA/- chr6:91437696-91437707 - ENSMUSG00000097693.3 ENSMUST00000181849.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91437696_AGAGAGGTCGAA/- chr6:91437696-91437707 - ENSMUSG00000100680.1 ENSMUST00000186472.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3280;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91437696_AGAGAGGTCGAA/- chr6:91437696-91437707 - ENSMUSG00000097693.3 ENSMUST00000206475.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1216;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91734496_GTGT/-/GT chr6:91734496-91734499 - ENSMUSG00000030096.8 ENSMUST00000032185.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91734496_GTGT/-/GT chr6:91734496-91734499 GT ENSMUSG00000030096.8 ENSMUST00000032185.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91734496_GTGT/-/GT chr6:91734496-91734499 - ENSMUSG00000030096.8 ENSMUST00000205443.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91734496_GTGT/-/GT chr6:91734496-91734499 GT ENSMUSG00000030096.8 ENSMUST00000205443.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91734496_GTGT/-/GT chr6:91734496-91734499 - ENSMUSG00000030096.8 ENSMUST00000205663.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91734496_GTGT/-/GT chr6:91734496-91734499 GT ENSMUSG00000030096.8 ENSMUST00000205663.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_91840829_ACAC/-/AC chr6:91840829-91840832 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_91840829_ACAC/-/AC chr6:91840829-91840832 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_92261029_C/G chr6:92261029 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_92695496_TCTC/-/TC chr6:92695496-92695499 - ENSMUSG00000030020.13 ENSMUST00000032093.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_92695496_TCTC/-/TC chr6:92695496-92695499 TC ENSMUSG00000030020.13 ENSMUST00000032093.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_93629803_CACA/- chr6:93629803-93629806 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_96173949_ACACAC/- chr6:96173949-96173954 - ENSMUSG00000059187.12 ENSMUST00000075080.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_96173949_ACACAC/- chr6:96173949-96173954 - ENSMUSG00000059187.12 ENSMUST00000122120.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_96718996_GATA/- chr6:96718996-96718999 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_96804991_ACAC/- chr6:96804991-96804994 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_96876806_G/A chr6:96876806 A ENSMUSG00000046500.8 ENSMUST00000089295.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_96876817_G/T chr6:96876817 T ENSMUSG00000046500.8 ENSMUST00000089295.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_96989156_AA/- chr6:96989156-96989157 - ENSMUSG00000046500.8 ENSMUST00000089295.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_97521695_AAAA/-/AAAAA chr6:97521695-97521698 - ENSMUSG00000030064.16 ENSMUST00000113355.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_97521695_AAAA/-/AAAAA chr6:97521695-97521698 AAAAA ENSMUSG00000030064.16 ENSMUST00000113355.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_97521695_AAAA/-/AAAAA chr6:97521695-97521698 - ENSMUSG00000030064.16 ENSMUST00000142589.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_97521695_AAAA/-/AAAAA chr6:97521695-97521698 AAAAA ENSMUSG00000030064.16 ENSMUST00000142589.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_97863328_GAGAGA/- chr6:97863328-97863333 - ENSMUSG00000035158.15 ENSMUST00000043637.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_97863328_GAGAGA/- chr6:97863328-97863333 - ENSMUSG00000035158.15 ENSMUST00000148233.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_97863328_GAGAGA/- chr6:97863328-97863333 - ENSMUSG00000035158.15 ENSMUST00000203884.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_98201568_-/GA chr6:98201567-98201568 GA ENSMUSG00000107902.1 ENSMUST00000205146.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000074346.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000113322.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000113324.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000113326.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000113328.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000113329.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000176565.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000176632.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000176850.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000177208.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000177230.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99104904_C/A chr6:99104904 A ENSMUSG00000030067.17 ENSMUST00000177307.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000074346.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000074346.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000075832.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000075832.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000113322.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000113322.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000113324.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000113324.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000113326.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000113326.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000113328.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000113328.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000113329.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000113329.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000131967.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000131967.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000138754.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000138754.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000176565.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000176565.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000176632.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000176632.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000176850.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000176850.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000177208.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000177208.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000177227.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000177227.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000177230.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000177230.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 - ENSMUSG00000030067.17 ENSMUST00000177307.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_99164064_TGTG/-/TG chr6:99164064-99164067 TG ENSMUSG00000030067.17 ENSMUST00000177307.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_101391713_-/TCTT chr6:101391712-101391713 TCTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_101750299_GATA/- chr6:101750299-101750302 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_102041291_T/A chr6:102041291 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_102041297_T/C chr6:102041297 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_102053342_GAA/- chr6:102053342-102053344 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_103091078_G/A chr6:103091078 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_103770817_TT/- chr6:103770817-103770818 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_103949391_AGAG/-/AG chr6:103949391-103949394 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_103949391_AGAG/-/AG chr6:103949391-103949394 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_104124097_CACA/- chr6:104124097-104124100 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_104306971_TATC/- chr6:104306971-104306974 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_104334038_T/G chr6:104334038 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_104638395_TT/-/T chr6:104638395-104638396 - ENSMUSG00000030092.14 ENSMUST00000089215.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_104638395_TT/-/T chr6:104638395-104638396 T ENSMUSG00000030092.14 ENSMUST00000089215.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_104638395_TT/-/T chr6:104638395-104638396 - ENSMUSG00000030092.14 ENSMUST00000161070.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_104638395_TT/-/T chr6:104638395-104638396 T ENSMUSG00000030092.14 ENSMUST00000161070.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_104638395_TT/-/T chr6:104638395-104638396 - ENSMUSG00000030092.14 ENSMUST00000161446.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_104638395_TT/-/T chr6:104638395-104638396 T ENSMUSG00000030092.14 ENSMUST00000161446.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_104638395_TT/-/T chr6:104638395-104638396 - ENSMUSG00000030092.14 ENSMUST00000162872.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_104638395_TT/-/T chr6:104638395-104638396 T ENSMUSG00000030092.14 ENSMUST00000162872.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000057578.15 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000057578.15 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000113247.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3014;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000113247.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3014;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000113248.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000113248.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000113249.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3035;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000113249.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3035;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000147084.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3064;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000147084.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3064;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000154026.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3107;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000154026.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3107;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000204782.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3401;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000204782.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3401;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 - ENSMUSG00000013736.16 ENSMUST00000205163.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3180;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_106766104_AAA/-/AA chr6:106766104-106766106 AA ENSMUSG00000013736.16 ENSMUST00000205163.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3180;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_107461745_A/G chr6:107461745 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_109171595_GAGA/- chr6:109171595-109171598 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_109652296_GTGTGTGT/- chr6:109652296-109652303 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_109975691_A/- chr6:109975691 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_109975693_T/C chr6:109975693 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_110146020_CA/C/AA chr6:110146020-110146021 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_110146020_CA/C/AA chr6:110146020-110146021 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_110247058_TG/- chr6:110247058-110247059 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_110977127_TCTC/- chr6:110977127-110977130 - ENSMUSG00000056755.13 ENSMUST00000071076.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_110977127_TCTC/- chr6:110977127-110977130 - ENSMUSG00000056755.13 ENSMUST00000172951.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_110977127_TCTC/- chr6:110977127-110977130 - ENSMUSG00000056755.13 ENSMUST00000174018.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111140287_A/C chr6:111140287 C ENSMUSG00000056755.13 ENSMUST00000071076.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111140287_A/C chr6:111140287 C ENSMUSG00000056755.13 ENSMUST00000172951.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111140287_A/C chr6:111140287 C ENSMUSG00000056755.13 ENSMUST00000174018.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111140290_AA/CC chr6:111140290-111140291 CC ENSMUSG00000056755.13 ENSMUST00000071076.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111140290_AA/CC chr6:111140290-111140291 CC ENSMUSG00000056755.13 ENSMUST00000172951.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111140290_AA/CC chr6:111140290-111140291 CC ENSMUSG00000056755.13 ENSMUST00000174018.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111436225_-/A chr6:111436224-111436225 A ENSMUSG00000056755.13 ENSMUST00000071076.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111436225_-/A chr6:111436224-111436225 A ENSMUSG00000056755.13 ENSMUST00000172951.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111436225_-/A chr6:111436224-111436225 A ENSMUSG00000056755.13 ENSMUST00000174018.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111462250_ACACAC/- chr6:111462250-111462255 - ENSMUSG00000056755.13 ENSMUST00000071076.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111462250_ACACAC/- chr6:111462250-111462255 - ENSMUSG00000056755.13 ENSMUST00000172951.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111462250_ACACAC/- chr6:111462250-111462255 - ENSMUSG00000056755.13 ENSMUST00000174018.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111546063_T/C chr6:111546063 C ENSMUSG00000056755.13 ENSMUST00000071076.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_111546063_T/C chr6:111546063 C ENSMUSG00000056755.13 ENSMUST00000172951.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_112836738_ACAC/- chr6:112836738-112836741 - ENSMUSG00000030257.16 ENSMUST00000060215.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_112836738_ACAC/- chr6:112836738-112836741 - ENSMUSG00000030257.16 ENSMUST00000088373.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_112836738_ACAC/- chr6:112836738-112836741 - ENSMUSG00000030257.16 ENSMUST00000113169.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113346239_A/T chr6:113346239 T ENSMUSG00000030272.15 ENSMUST00000032409.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2255;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113346239_A/T chr6:113346239 T ENSMUSG00000030272.15 ENSMUST00000149497.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2335;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113346239_A/T chr6:113346239 T ENSMUSG00000030272.15 ENSMUST00000155543.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2261;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113346239_A/T chr6:113346239 T ENSMUSG00000030272.15 ENSMUST00000156853.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2276;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113667448_GT/- chr6:113667448-113667449 - ENSMUSG00000060477.14 ENSMUST00000059286.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113667448_GT/- chr6:113667448-113667449 - ENSMUSG00000060477.14 ENSMUST00000089022.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113667448_GT/- chr6:113667448-113667449 - ENSMUSG00000060477.14 ENSMUST00000089023.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113667448_GT/- chr6:113667448-113667449 - ENSMUSG00000060477.14 ENSMUST00000113024.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2329;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113667448_GT/- chr6:113667448-113667449 - ENSMUSG00000060477.14 ENSMUST00000155554.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1401;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113667448_GT/- chr6:113667448-113667449 - ENSMUSG00000060477.14 ENSMUST00000204091.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1439;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_113667448_GT/- chr6:113667448-113667449 - ENSMUSG00000060477.14 ENSMUST00000204744.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114397270_ACAC/-/AC chr6:114397270-114397273 - ENSMUSG00000053004.9 ENSMUST00000088987.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=663;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114397270_ACAC/-/AC chr6:114397270-114397273 AC ENSMUSG00000053004.9 ENSMUST00000088987.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=663;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114397270_ACAC/-/AC chr6:114397270-114397273 - ENSMUSG00000053004.9 ENSMUST00000160212.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=813;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114397270_ACAC/-/AC chr6:114397270-114397273 AC ENSMUSG00000053004.9 ENSMUST00000160212.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=813;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114561480_-/CTCT chr6:114561479-114561480 CTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_114757934_A/C chr6:114757934 C ENSMUSG00000030314.16 ENSMUST00000032457.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114757934_A/C chr6:114757934 C ENSMUSG00000030314.16 ENSMUST00000169310.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114757934_A/C chr6:114757934 C ENSMUSG00000030314.16 ENSMUST00000182428.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114757934_A/C chr6:114757934 C ENSMUSG00000030314.16 ENSMUST00000182793.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114757934_A/C chr6:114757934 C ENSMUSG00000030314.16 ENSMUST00000182860.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114757934_A/C chr6:114757934 C ENSMUSG00000030314.16 ENSMUST00000182902.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_114757934_A/C chr6:114757934 C ENSMUSG00000030314.16 ENSMUST00000183165.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115059261_AA/- chr6:115059261-115059262 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_115457195_TTT/- chr6:115457195-115457197 - ENSMUSG00000000440.12 ENSMUST00000000450.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115457195_TTT/- chr6:115457195-115457197 - ENSMUSG00000000440.12 ENSMUST00000171644.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115457195_TTT/- chr6:115457195-115457197 - ENSMUSG00000000440.12 ENSMUST00000203732.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115457195_TTT/- chr6:115457195-115457197 - ENSMUSG00000000440.12 ENSMUST00000203896.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115457195_TTT/- chr6:115457195-115457197 - ENSMUSG00000108141.1 ENSMUST00000204889.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115457195_TTT/- chr6:115457195-115457197 - ENSMUSG00000000440.12 ENSMUST00000205213.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115477760_G/T chr6:115477760 T ENSMUSG00000000440.12 ENSMUST00000000450.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115477760_G/T chr6:115477760 T ENSMUSG00000000440.12 ENSMUST00000171644.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115477760_G/T chr6:115477760 T ENSMUSG00000000440.12 ENSMUST00000203732.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115831895_AGAG/- chr6:115831895-115831898 - ENSMUSG00000030321.15 ENSMUST00000032468.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115831895_AGAG/- chr6:115831895-115831898 - ENSMUSG00000030321.15 ENSMUST00000124531.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115831895_AGAG/- chr6:115831895-115831898 - ENSMUSG00000030321.15 ENSMUST00000184428.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115831895_AGAG/- chr6:115831895-115831898 - ENSMUSG00000107429.2 ENSMUST00000203044.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115831895_AGAG/- chr6:115831895-115831898 - ENSMUSG00000107429.2 ENSMUST00000203620.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4233;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115970056_GG/-/G chr6:115970056-115970057 - ENSMUSG00000030123.15 ENSMUST00000015511.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115970056_GG/-/G chr6:115970056-115970057 G ENSMUSG00000030123.15 ENSMUST00000015511.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115970056_GG/-/G chr6:115970056-115970057 - ENSMUSG00000030123.15 ENSMUST00000131590.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=630;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_115970056_GG/-/G chr6:115970056-115970057 G ENSMUSG00000030123.15 ENSMUST00000131590.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=630;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_116664934_GTGT/- chr6:116664934-116664937 - ENSMUSG00000042129.8 ENSMUST00000035842.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_116664934_GTGT/- chr6:116664934-116664937 - ENSMUSG00000042129.8 ENSMUST00000203029.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_116664934_GTGT/- chr6:116664934-116664937 - ENSMUSG00000042129.8 ENSMUST00000204203.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_116664934_GTGT/- chr6:116664934-116664937 - ENSMUSG00000042129.8 ENSMUST00000204313.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_116664934_GTGT/- chr6:116664934-116664937 - ENSMUSG00000042129.8 ENSMUST00000204576.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_116926814_T/G chr6:116926814 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_117135830_AA/- chr6:117135830-117135831 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_117305904_CACA/- chr6:117305904-117305907 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_117860365_ATACATAC/- chr6:117860365-117860372 - ENSMUSG00000042097.17 ENSMUST00000079405.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2705;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_117860365_ATACATAC/- chr6:117860365-117860372 - ENSMUSG00000042097.17 ENSMUST00000112857.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2712;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_117860365_ATACATAC/- chr6:117860365-117860372 - ENSMUSG00000042097.17 ENSMUST00000134619.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2705;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_117860365_ATACATAC/- chr6:117860365-117860372 - ENSMUSG00000042097.17 ENSMUST00000136316.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1728;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_117860365_ATACATAC/- chr6:117860365-117860372 - ENSMUSG00000042097.17 ENSMUST00000141657.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2712;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_117860365_ATACATAC/- chr6:117860365-117860372 - ENSMUSG00000042097.17 ENSMUST00000150936.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2712;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_117860365_ATACATAC/- chr6:117860365-117860372 - ENSMUSG00000042097.17 ENSMUST00000172088.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2705;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119272760_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr6:119272759-119272760 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000041460.14 ENSMUST00000037434.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119272760_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr6:119272759-119272760 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000041460.14 ENSMUST00000186176.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=826;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119272760_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr6:119272759-119272760 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000041460.14 ENSMUST00000186622.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119272760_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr6:119272759-119272760 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000041460.14 ENSMUST00000187222.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1528;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119272760_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr6:119272759-119272760 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000041460.14 ENSMUST00000188239.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119272760_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr6:119272759-119272760 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000041460.14 ENSMUST00000190015.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119272760_-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG chr6:119272759-119272760 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG ENSMUSG00000041460.14 ENSMUST00000191331.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1485;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119308411_T/- chr6:119308411 - ENSMUSG00000041460.14 ENSMUST00000037434.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119308411_T/- chr6:119308411 - ENSMUSG00000041460.14 ENSMUST00000186622.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000032269.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1544;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000159291.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1502;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000159356.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1473;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000160877.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1473;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000161045.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1471;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000161816.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1496;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000162205.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1466;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000162255.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1502;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000162461.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1471;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000030166.14 ENSMUST00000162590.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1507;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_119901232_G/T chr6:119901232 T ENSMUSG00000097831.1 ENSMUST00000180527.1 Transcript non_coding_transcript_exon_variant 1422 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120060270_T/A chr6:120060270 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_120295433_AA/-/AAA chr6:120295433-120295434 - ENSMUSG00000041372.10 ENSMUST00000057283.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=874;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120295433_AA/-/AAA chr6:120295433-120295434 AAA ENSMUSG00000041372.10 ENSMUST00000057283.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=874;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120295433_AA/-/AAA chr6:120295433-120295434 - ENSMUSG00000097481.1 ENSMUST00000181956.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120295433_AA/-/AAA chr6:120295433-120295434 AAA ENSMUSG00000097481.1 ENSMUST00000181956.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120295433_AA/-/AAA chr6:120295433-120295434 - ENSMUSG00000041372.10 ENSMUST00000212457.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=874;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120295433_AA/-/AAA chr6:120295433-120295434 AAA ENSMUSG00000041372.10 ENSMUST00000212457.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=874;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120924470_-/CTTT chr6:120924469-120924470 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_120945990_C/G chr6:120945990 G ENSMUSG00000051586.16 ENSMUST00000098457.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120945990_C/G chr6:120945990 G ENSMUSG00000051586.16 ENSMUST00000142924.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4693;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120945990_C/G chr6:120945990 G ENSMUSG00000051586.16 ENSMUST00000151602.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120945990_C/G chr6:120945990 G ENSMUSG00000051586.16 ENSMUST00000207889.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_120945990_C/G chr6:120945990 G ENSMUSG00000051586.16 ENSMUST00000212333.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_121810241_-/CACA chr6:121810240-121810241 CACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_122227608_T/C chr6:122227608 C ENSMUSG00000101397.6 ENSMUST00000186891.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122227608_T/C chr6:122227608 C ENSMUSG00000101397.6 ENSMUST00000189975.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1452;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122296988_TCTC/- chr6:122296988-122296991 - ENSMUSG00000108090.1 ENSMUST00000204884.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=943;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000079560.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4990;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000081849.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4990;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000112600.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1444;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000159252.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2349;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000159384.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1781;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000159657.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000160163.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2393;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000160696.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3141;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000160843.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000161054.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2360;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000161149.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2297;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000161210.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2378;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000161739.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2347;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122342005_G/A chr6:122342005 A ENSMUSG00000040669.14 ENSMUST00000161877.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2393;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122557566_GT/- chr6:122557566-122557567 - ENSMUSG00000040627.14 ENSMUST00000043301.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122557566_GT/- chr6:122557566-122557567 - ENSMUSG00000040627.14 ENSMUST00000160685.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2918;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122557566_GT/- chr6:122557566-122557567 - ENSMUSG00000090192.1 ENSMUST00000162608.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2503;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122557566_GT/- chr6:122557566-122557567 - ENSMUSG00000090192.1 ENSMUST00000162980.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2477;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122721217_TTT/- chr6:122721217-122721219 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_122725336_T/C chr6:122725336 C ENSMUSG00000003153.10 ENSMUST00000032476.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2473;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122725336_T/C chr6:122725336 C ENSMUSG00000003153.10 ENSMUST00000166135.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4595;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122725336_T/C chr6:122725336 C ENSMUSG00000003153.10 ENSMUST00000168704.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2490;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122725343_TG/CC chr6:122725343-122725344 CC ENSMUSG00000003153.10 ENSMUST00000032476.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2465;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122725343_TG/CC chr6:122725343-122725344 CC ENSMUSG00000003153.10 ENSMUST00000166135.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4587;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122725343_TG/CC chr6:122725343-122725344 CC ENSMUSG00000003153.10 ENSMUST00000168704.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2482;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122790438_C/A chr6:122790438 A ENSMUSG00000003153.10 ENSMUST00000165884.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_122790438_C/A chr6:122790438 A ENSMUSG00000107066.2 ENSMUST00000200876.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2146;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_123042586_G/A chr6:123042586 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_123254220_TT/- chr6:123254220-123254221 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_123359809_C/T chr6:123359809 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_124442100_GT/AC chr6:124442100-124442101 AC ENSMUSG00000008153.11 ENSMUST00000008297.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124442100_GT/AC chr6:124442100-124442101 AC ENSMUSG00000008153.11 ENSMUST00000112523.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124442100_GT/AC chr6:124442100-124442101 AC ENSMUSG00000008153.11 ENSMUST00000143283.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3221;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124442100_GT/AC chr6:124442100-124442101 AC ENSMUSG00000008153.11 ENSMUST00000147947.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124468169_CACA/-/CACACA chr6:124468169-124468172 - ENSMUSG00000008153.11 ENSMUST00000008297.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3375;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124468169_CACA/-/CACACA chr6:124468169-124468172 CACACA ENSMUSG00000008153.11 ENSMUST00000008297.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3375;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124468169_CACA/-/CACACA chr6:124468169-124468172 - ENSMUSG00000008153.11 ENSMUST00000150774.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4068;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124468169_CACA/-/CACACA chr6:124468169-124468172 CACACA ENSMUSG00000008153.11 ENSMUST00000150774.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4068;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124673300_AGAG/- chr6:124673300-124673303 - ENSMUSG00000004270.13 ENSMUST00000004381.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124673300_AGAG/- chr6:124673300-124673303 - ENSMUSG00000004270.13 ENSMUST00000128721.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124673300_AGAG/- chr6:124673300-124673303 - ENSMUSG00000004270.13 ENSMUST00000133797.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124673300_AGAG/- chr6:124673300-124673303 - ENSMUSG00000004270.13 ENSMUST00000135516.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_124673300_AGAG/- chr6:124673300-124673303 - ENSMUSG00000004270.13 ENSMUST00000141069.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000046064.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000054553.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000084275.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000088308.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000112424.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000112425.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000112427.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000112428.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000132863.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000137325.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000140835.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1932;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000144308.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2815;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000145138.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000038346.18 ENSMUST00000145566.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1936;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125034720_-/A chr6:125034719-125034720 A ENSMUSG00000108034.1 ENSMUST00000205110.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000030330.15 ENSMUST00000032480.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=145;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000046064.16 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1821;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000054553.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000084275.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000088308.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000030330.15 ENSMUST00000112417.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000112424.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000112425.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000112427.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1931;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000112428.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1826;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000030330.15 ENSMUST00000128277.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=145;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000132863.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3511;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000137325.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1874;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000030330.15 ENSMUST00000140131.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=69;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000108037.2 ENSMUST00000140883.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=154;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000038346.18 ENSMUST00000145138.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000030330.15 ENSMUST00000151125.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000030330.15 ENSMUST00000152574.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=157;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000030330.15 ENSMUST00000156091.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4263;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000108037.2 ENSMUST00000203287.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=125;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125039691_C/A chr6:125039691 A ENSMUSG00000108034.1 ENSMUST00000205110.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125130500_AA/- chr6:125130500-125130501 - ENSMUSG00000038279.10 ENSMUST00000044200.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125130500_AA/- chr6:125130500-125130501 - ENSMUSG00000063870.12 ENSMUST00000056889.14 Transcript 3_prime_UTR_variant 6606-6607 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125130500_AA/- chr6:125130500-125130501 - ENSMUSG00000063870.12 ENSMUST00000112390.7 Transcript 3_prime_UTR_variant 6446-6447 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125130500_AA/- chr6:125130500-125130501 - ENSMUSG00000063870.12 ENSMUST00000112392.7 Transcript 3_prime_UTR_variant 6567-6568 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125130500_AA/- chr6:125130500-125130501 - ENSMUSG00000038279.10 ENSMUST00000204185.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1532;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125368129_GTGT/- chr6:125368129-125368132 - ENSMUSG00000038167.6 ENSMUST00000042647.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125421988_T/A chr6:125421988 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_125488311_TT/- chr6:125488311-125488312 - ENSMUSG00000030342.8 ENSMUST00000032492.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125488311_TT/- chr6:125488311-125488312 - ENSMUSG00000101191.6 ENSMUST00000187542.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3633;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_125488311_TT/- chr6:125488311-125488312 - ENSMUSG00000101191.6 ENSMUST00000187724.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4744;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_126148789_ACAC/- chr6:126148789-126148792 - ENSMUSG00000049107.13 ENSMUST00000050484.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_126148789_ACAC/- chr6:126148789-126148792 - ENSMUSG00000049107.13 ENSMUST00000112244.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_126148789_ACAC/- chr6:126148789-126148792 - ENSMUSG00000049107.13 ENSMUST00000204542.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_126168621_CC/- chr6:126168621-126168622 - ENSMUSG00000049107.13 ENSMUST00000050484.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1711;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_126168621_CC/- chr6:126168621-126168622 - ENSMUSG00000049107.13 ENSMUST00000112244.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1906;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_126168621_CC/- chr6:126168621-126168622 - ENSMUSG00000049107.13 ENSMUST00000204542.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3661;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_126395588_AA/- chr6:126395588-126395589 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_126630926_C/G chr6:126630926 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_127347961_GTGT/- chr6:127347961-127347964 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_127561995_GTGTGT/- chr6:127561995-127562000 - ENSMUSG00000061414.8 ENSMUST00000212051.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128161165_AA/-/A chr6:128161165-128161166 - ENSMUSG00000108220.1 ENSMUST00000204623.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4330;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128161165_AA/-/A chr6:128161165-128161166 A ENSMUSG00000108220.1 ENSMUST00000204623.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4330;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000001518.12 ENSMUST00000001559.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4590;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000030357.10 ENSMUST00000032508.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=581;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000001518.12 ENSMUST00000133994.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4591;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000030357.10 ENSMUST00000139448.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=213;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000001518.12 ENSMUST00000142615.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4603;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000030357.10 ENSMUST00000150387.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3693;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000030357.10 ENSMUST00000151796.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000001518.12 ENSMUST00000203026.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4608;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000001518.12 ENSMUST00000203374.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4652;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000001518.12 ENSMUST00000203853.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4609;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128429521_TT/- chr6:128429521-128429522 - ENSMUSG00000001518.12 ENSMUST00000204467.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4603;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128492285_T/C chr6:128492285 C ENSMUSG00000030359.14 ENSMUST00000112132.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128492285_T/C chr6:128492285 C ENSMUSG00000030359.14 ENSMUST00000203753.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1063;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128492285_T/C chr6:128492285 C ENSMUSG00000059659.7 ENSMUST00000204037.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3272;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128492285_T/C chr6:128492285 C ENSMUSG00000059659.7 ENSMUST00000204081.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128492285_T/C chr6:128492285 C ENSMUSG00000030359.14 ENSMUST00000204291.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4430;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_128687446_T/C chr6:128687446 C ENSMUSG00000107495.1 ENSMUST00000204910.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3627;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_129003076_T/A chr6:129003076 A ENSMUSG00000087150.7 ENSMUST00000122939.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_129003076_T/A chr6:129003076 A ENSMUSG00000087150.7 ENSMUST00000131176.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_129556789_-/C chr6:129556788-129556789 C ENSMUSG00000108257.1 ENSMUST00000204963.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4340;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_129882605_GTGT/-/GTGTGT chr6:129882605-129882608 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_129882605_GTGT/-/GTGTGT chr6:129882605-129882608 GTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_130575541_A/G chr6:130575541 G ENSMUSG00000107519.1 ENSMUST00000204418.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4225;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_130759680_-/A chr6:130759679-130759680 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_131037178_A/T chr6:131037178 T ENSMUSG00000108066.2 ENSMUST00000203064.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1066;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_131037178_A/T chr6:131037178 T ENSMUSG00000108066.2 ENSMUST00000204777.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1003;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_131115176_C/T chr6:131115176 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_131115185_A/C chr6:131115185 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_131877293_G/T chr6:131877293 T ENSMUSG00000107983.1 ENSMUST00000203562.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3375;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_132626826_-/C chr6:132626825-132626826 C ENSMUSG00000067541.7 ENSMUST00000091791.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_132626826_-/C chr6:132626825-132626826 C ENSMUSG00000067541.7 ENSMUST00000203888.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_132626826_-/C chr6:132626825-132626826 C ENSMUSG00000067541.7 ENSMUST00000205081.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_133254877_-/CTTTC chr6:133254876-133254877 CTTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_134277820_CTCT/-/CT chr6:134277820-134277823 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_134277820_CTCT/-/CT chr6:134277820-134277823 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_134365037_GTGTGT/-/GT chr6:134365037-134365042 - ENSMUSG00000107666.1 ENSMUST00000203352.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_134365037_GTGTGT/-/GT chr6:134365037-134365042 GT ENSMUSG00000107666.1 ENSMUST00000203352.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_134955217_CACA/- chr6:134955217-134955220 - ENSMUSG00000098318.7 ENSMUST00000183867.6 Transcript non_coding_transcript_exon_variant 4081-4084 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_134955217_CACA/- chr6:134955217-134955220 - ENSMUSG00000098318.7 ENSMUST00000183905.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3640;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_134955217_CACA/- chr6:134955217-134955220 - ENSMUSG00000098318.7 ENSMUST00000184504.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3499;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_134955217_CACA/- chr6:134955217-134955220 - ENSMUSG00000098318.7 ENSMUST00000184991.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3874;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_134955217_CACA/- chr6:134955217-134955220 - ENSMUSG00000098318.7 ENSMUST00000185152.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3642;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_134967547_CTAT/- chr6:134967547-134967550 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_137163460_ATAG/- chr6:137163460-137163463 - ENSMUSG00000030222.13 ENSMUST00000032347.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137163460_ATAG/- chr6:137163460-137163463 - ENSMUSG00000030222.13 ENSMUST00000117919.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137163460_ATAG/- chr6:137163460-137163463 - ENSMUSG00000030222.13 ENSMUST00000119610.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137163460_ATAG/- chr6:137163460-137163463 - ENSMUSG00000030222.13 ENSMUST00000149100.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 - ENSMUSG00000015766.14 ENSMUST00000058210.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AA ENSMUSG00000015766.14 ENSMUST00000058210.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AAAA ENSMUSG00000015766.14 ENSMUST00000058210.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 - ENSMUSG00000015766.14 ENSMUST00000100841.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AA ENSMUSG00000015766.14 ENSMUST00000100841.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AAAA ENSMUSG00000015766.14 ENSMUST00000100841.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 - ENSMUSG00000015766.14 ENSMUST00000111878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AA ENSMUSG00000015766.14 ENSMUST00000111878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AAAA ENSMUSG00000015766.14 ENSMUST00000111878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 - ENSMUSG00000015766.14 ENSMUST00000147526.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4686;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AA ENSMUSG00000015766.14 ENSMUST00000147526.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4686;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137494951_AAA/-/AA/AAAA chr6:137494951-137494953 AAAA ENSMUSG00000015766.14 ENSMUST00000147526.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4686;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 - ENSMUSG00000015766.14 ENSMUST00000058210.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 AC ENSMUSG00000015766.14 ENSMUST00000058210.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 - ENSMUSG00000015766.14 ENSMUST00000100841.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 AC ENSMUSG00000015766.14 ENSMUST00000100841.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 - ENSMUSG00000015766.14 ENSMUST00000111878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 AC ENSMUSG00000015766.14 ENSMUST00000111878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 - ENSMUSG00000015766.14 ENSMUST00000132920.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 AC ENSMUSG00000015766.14 ENSMUST00000132920.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 - ENSMUSG00000015766.14 ENSMUST00000146442.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 AC ENSMUSG00000015766.14 ENSMUST00000146442.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 - ENSMUSG00000015766.14 ENSMUST00000147526.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 AC ENSMUSG00000015766.14 ENSMUST00000147526.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 - ENSMUSG00000015766.14 ENSMUST00000153933.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=384;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_137527008_ACAC/-/AC chr6:137527008-137527011 AC ENSMUSG00000015766.14 ENSMUST00000153933.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=384;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138049332_ACACAC/-/ACAC chr6:138049332-138049337 - ENSMUSG00000044378.12 ENSMUST00000050132.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138049332_ACACAC/-/ACAC chr6:138049332-138049337 ACAC ENSMUSG00000044378.12 ENSMUST00000050132.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138049332_ACACAC/-/ACAC chr6:138049332-138049337 - ENSMUSG00000044378.12 ENSMUST00000154461.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138049332_ACACAC/-/ACAC chr6:138049332-138049337 ACAC ENSMUSG00000044378.12 ENSMUST00000154461.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138049332_ACACAC/-/ACAC chr6:138049332-138049337 - ENSMUSG00000044378.12 ENSMUST00000171804.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138049332_ACACAC/-/ACAC chr6:138049332-138049337 ACAC ENSMUSG00000044378.12 ENSMUST00000171804.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138077586_-/GA chr6:138077585-138077586 GA ENSMUSG00000044378.12 ENSMUST00000050132.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4389;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138077586_-/GA chr6:138077585-138077586 GA ENSMUSG00000044378.12 ENSMUST00000171804.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_138237170_GT/- chr6:138237170-138237171 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_138758507_G/T chr6:138758507 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_138895168_CACA/- chr6:138895168-138895171 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_139021678_TGTGTG/- chr6:139021678-139021683 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_139100018_-/G chr6:139100017-139100018 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_139175714_-/TTTA chr6:139175713-139175714 TTTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_139561204_G/A chr6:139561204 A ENSMUSG00000107679.1 ENSMUST00000203246.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139656653_A/G/AAAG chr6:139656653 G ENSMUSG00000030228.18 ENSMUST00000185968.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139656653_A/G/AAAG chr6:139656653 AAAG ENSMUSG00000030228.18 ENSMUST00000185968.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139656653_A/G/AAAG chr6:139656653 G ENSMUSG00000030228.18 ENSMUST00000186585.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139656653_A/G/AAAG chr6:139656653 AAAG ENSMUSG00000030228.18 ENSMUST00000186585.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 - ENSMUSG00000030228.18 ENSMUST00000087657.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 TCTCTC ENSMUSG00000030228.18 ENSMUST00000087657.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 - ENSMUSG00000030228.18 ENSMUST00000111868.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 TCTCTC ENSMUSG00000030228.18 ENSMUST00000111868.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 - ENSMUSG00000030228.18 ENSMUST00000187448.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 TCTCTC ENSMUSG00000030228.18 ENSMUST00000187448.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 - ENSMUSG00000030228.18 ENSMUST00000189374.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 TCTCTC ENSMUSG00000030228.18 ENSMUST00000189374.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 - ENSMUSG00000030228.18 ENSMUST00000218528.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_139880338_TCTCTCTC/-/TCTCTC chr6:139880338-139880345 TCTCTC ENSMUSG00000030228.18 ENSMUST00000218528.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_140121852_T/A chr6:140121852 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_140193316_A/C chr6:140193316 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_140373319_TATA/-/TA chr6:140373319-140373322 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_140373319_TATA/-/TA chr6:140373319-140373322 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_141974726_-/ACACAC chr6:141974725-141974726 ACACAC ENSMUSG00000079263.8 ENSMUST00000111832.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_141974726_-/ACACAC chr6:141974725-141974726 ACACAC ENSMUSG00000079263.8 ENSMUST00000181628.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_141974726_-/ACACAC chr6:141974725-141974726 ACACAC ENSMUSG00000079263.8 ENSMUST00000181791.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142340419_GT/- chr6:142340419-142340420 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_142590053_-/A chr6:142590052-142590053 A ENSMUSG00000030249.15 ENSMUST00000073173.11 Transcript 3_prime_UTR_variant 5242-5243 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142590053_-/A chr6:142590052-142590053 A ENSMUSG00000030249.15 ENSMUST00000087527.10 Transcript 3_prime_UTR_variant 5291-5292 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142590053_-/A chr6:142590052-142590053 A ENSMUSG00000030249.15 ENSMUST00000100827.4 Transcript 3_prime_UTR_variant 5115-5116 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142590053_-/A chr6:142590052-142590053 A ENSMUSG00000030249.15 ENSMUST00000111771.7 Transcript 3_prime_UTR_variant 5308-5309 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142590053_-/A chr6:142590052-142590053 A ENSMUSG00000030249.15 ENSMUST00000205202.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3952;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142620145_-/TTCT chr6:142620144-142620145 TTCT ENSMUSG00000030249.15 ENSMUST00000073173.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142620145_-/TTCT chr6:142620144-142620145 TTCT ENSMUSG00000030249.15 ENSMUST00000087527.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142620145_-/TTCT chr6:142620144-142620145 TTCT ENSMUSG00000030249.15 ENSMUST00000100827.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142620145_-/TTCT chr6:142620144-142620145 TTCT ENSMUSG00000030249.15 ENSMUST00000111771.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142620145_-/TTCT chr6:142620144-142620145 TTCT ENSMUSG00000104234.1 ENSMUST00000194811.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142620145_-/TTCT chr6:142620144-142620145 TTCT ENSMUSG00000030249.15 ENSMUST00000205202.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 - ENSMUSG00000030282.14 ENSMUST00000032419.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 TCTC ENSMUSG00000030282.14 ENSMUST00000032419.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 - ENSMUSG00000030282.14 ENSMUST00000133248.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=693;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 TCTC ENSMUSG00000030282.14 ENSMUST00000133248.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=693;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 - ENSMUSG00000030282.14 ENSMUST00000144920.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=703;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 TCTC ENSMUSG00000030282.14 ENSMUST00000144920.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=703;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 - ENSMUSG00000030282.14 ENSMUST00000204147.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=714;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_142756056_TCTCTC/-/TCTC chr6:142756056-142756061 TCTC ENSMUSG00000030282.14 ENSMUST00000204147.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=714;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 - ENSMUSG00000030275.6 ENSMUST00000032413.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4759;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 TTTTT ENSMUSG00000030275.6 ENSMUST00000032413.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4759;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 - ENSMUSG00000030275.6 ENSMUST00000203341.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 TTTTT ENSMUSG00000030275.6 ENSMUST00000203341.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 - ENSMUSG00000030275.6 ENSMUST00000204947.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4750;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 TTTTT ENSMUSG00000030275.6 ENSMUST00000204947.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4750;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 - ENSMUSG00000030275.6 ENSMUST00000205256.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143162469_TTT/-/TTTTT chr6:143162469-143162471 TTTTT ENSMUSG00000030275.6 ENSMUST00000205256.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143182552_T/G chr6:143182552 G ENSMUSG00000030275.6 ENSMUST00000032413.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143182552_T/G chr6:143182552 G ENSMUSG00000030275.6 ENSMUST00000203341.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143182552_T/G chr6:143182552 G ENSMUSG00000030275.6 ENSMUST00000204947.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143182552_T/G chr6:143182552 G ENSMUSG00000030275.6 ENSMUST00000205256.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143241673_C/A chr6:143241673 A ENSMUSG00000072679.10 ENSMUST00000100817.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4220;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143241673_C/A chr6:143241673 A ENSMUSG00000072679.10 ENSMUST00000159793.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4215;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143241673_C/A chr6:143241673 A ENSMUSG00000072679.10 ENSMUST00000160188.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4215;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143241673_C/A chr6:143241673 A ENSMUSG00000072679.10 ENSMUST00000161174.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4220;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143538152_TT/-/T chr6:143538152-143538153 - ENSMUSG00000084971.1 ENSMUST00000132321.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2644;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_143538152_TT/-/T chr6:143538152-143538153 T ENSMUSG00000084971.1 ENSMUST00000132321.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2644;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144289679_AA/- chr6:144289679-144289680 - ENSMUSG00000041540.16 ENSMUST00000141102.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144289679_AA/- chr6:144289679-144289680 - ENSMUSG00000041540.16 ENSMUST00000149451.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144423019_GGAGAGGAGAGGAGAAGAGAGAGGAGA/- chr6:144423019-144423045 - ENSMUSG00000041540.16 ENSMUST00000141102.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144423019_GGAGAGGAGAGGAGAAGAGAGAGGAGA/- chr6:144423019-144423045 - ENSMUSG00000041540.16 ENSMUST00000149451.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144676927_TATA/- chr6:144676927-144676930 - ENSMUSG00000085785.7 ENSMUST00000139351.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144676927_TATA/- chr6:144676927-144676930 - ENSMUSG00000041540.16 ENSMUST00000141102.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144676927_TATA/- chr6:144676927-144676930 - ENSMUSG00000072677.4 ENSMUST00000144026.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4207;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144676927_TATA/- chr6:144676927-144676930 - ENSMUSG00000041540.16 ENSMUST00000149451.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_144676927_TATA/- chr6:144676927-144676930 - ENSMUSG00000085785.7 ENSMUST00000154167.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2772;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000032396.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000125029.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000132937.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4420;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000132948.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000135984.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000143631.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000149244.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000152571.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145153324_ATTT/- chr6:145153324-145153327 - ENSMUSG00000030263.13 ENSMUST00000156849.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145454949_TGTGTG/-/TGTG chr6:145454949-145454954 - ENSMUSG00000054966.13 ENSMUST00000111706.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4182;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145454949_TGTGTG/-/TGTG chr6:145454949-145454954 TGTG ENSMUSG00000054966.13 ENSMUST00000111706.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4182;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145454949_TGTGTG/-/TGTG chr6:145454949-145454954 - ENSMUSG00000054966.13 ENSMUST00000148739.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145454949_TGTGTG/-/TGTG chr6:145454949-145454954 TGTG ENSMUSG00000054966.13 ENSMUST00000148739.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_145663512_AGAG/- chr6:145663512-145663515 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_146333318_AA/-/A chr6:146333318-146333319 - ENSMUSG00000030287.15 ENSMUST00000053273.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146333318_AA/-/A chr6:146333318-146333319 A ENSMUSG00000030287.15 ENSMUST00000053273.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146333318_AA/-/A chr6:146333318-146333319 - ENSMUSG00000030287.15 ENSMUST00000079573.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146333318_AA/-/A chr6:146333318-146333319 A ENSMUSG00000030287.15 ENSMUST00000079573.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146860287_GTGT/- chr6:146860287-146860290 - ENSMUSG00000030292.10 ENSMUST00000032433.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146860287_GTGT/- chr6:146860287-146860290 - ENSMUSG00000030292.10 ENSMUST00000128575.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4105;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146860287_GTGT/- chr6:146860287-146860290 - ENSMUSG00000030292.10 ENSMUST00000148099.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1510;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146860287_GTGT/- chr6:146860287-146860290 - ENSMUSG00000030292.10 ENSMUST00000205239.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146921039_T/G chr6:146921039 G ENSMUSG00000016487.15 ENSMUST00000016631.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146921039_T/G chr6:146921039 G ENSMUSG00000016487.15 ENSMUST00000111623.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_146921039_T/G chr6:146921039 G ENSMUSG00000016487.15 ENSMUST00000203730.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_147078454_T/G chr6:147078454 G ENSMUSG00000040112.9 ENSMUST00000036111.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4463;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_147078454_T/G chr6:147078454 G ENSMUSG00000072662.2 ENSMUST00000100780.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_147078454_T/G chr6:147078454 G ENSMUSG00000072662.2 ENSMUST00000123367.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2979;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_147614711_A/C chr6:147614711 C ENSMUSG00000030301.17 ENSMUST00000032441.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_147974334_GATA/- chr6:147974334-147974337 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_147975179_G/A chr6:147975179 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_148543720_AA/- chr6:148543720-148543721 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_148638161_TT/- chr6:148638161-148638162 - ENSMUSG00000065269.1 ENSMUST00000083335.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4362;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_148736016_AA/- chr6:148736016-148736017 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_148903025_AAAA/- chr6:148903025-148903028 - ENSMUSG00000095288.1 ENSMUST00000121643.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1887;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_148903025_AAAA/- chr6:148903025-148903028 - ENSMUSG00000108254.1 ENSMUST00000205074.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2387;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000047531.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000111547.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2616;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000111548.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2616;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000111551.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000126406.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3462;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000134306.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000147934.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000166416.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149147748_C/A chr6:149147748 A ENSMUSG00000039958.17 ENSMUST00000179873.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr6_149377438_AGAGAG/-/AGAG chr6:149377438-149377443 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr6_149377438_AGAGAG/-/AGAG chr6:149377438-149377443 AGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_3322101_GTGT/- chr7:3322101-3322104 - ENSMUSG00000078816.9 ENSMUST00000100301.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_3322101_GTGT/- chr7:3322101-3322104 - ENSMUSG00000078816.9 ENSMUST00000172109.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_3322101_GTGT/- chr7:3322101-3322104 - ENSMUSG00000078816.9 ENSMUST00000203081.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3089;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_3352112_A/T chr7:3352112 T ENSMUSG00000069806.5 ENSMUST00000092891.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_3352112_A/T chr7:3352112 T ENSMUSG00000069806.5 ENSMUST00000203497.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4246575_TACAC/T/CACAC/TACACAC chr7:4246575-4246579 T ENSMUSG00000070873.5 ENSMUST00000117550.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3112;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4246575_TACAC/T/CACAC/TACACAC chr7:4246575-4246579 CACAC ENSMUSG00000070873.5 ENSMUST00000117550.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3112;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4246575_TACAC/T/CACAC/TACACAC chr7:4246575-4246579 TACACAC ENSMUSG00000070873.5 ENSMUST00000117550.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3112;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4412327_T/G chr7:4412327 G ENSMUSG00000108761.1 ENSMUST00000206596.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=111;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4547951_TGTG/- chr7:4547951-4547954 - ENSMUSG00000035429.13 ENSMUST00000049113.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=658;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4547951_TGTG/- chr7:4547951-4547954 - ENSMUSG00000004961.7 ENSMUST00000065957.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1384;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4547951_TGTG/- chr7:4547951-4547954 - ENSMUSG00000035429.13 ENSMUST00000166650.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1038;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4547951_TGTG/- chr7:4547951-4547954 - ENSMUSG00000035429.13 ENSMUST00000205417.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4750;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4547951_TGTG/- chr7:4547951-4547954 - ENSMUSG00000004961.7 ENSMUST00000206023.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=410;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4547951_TGTG/- chr7:4547951-4547954 - ENSMUSG00000004961.7 ENSMUST00000206933.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=978;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4547951_TGTG/- chr7:4547951-4547954 - ENSMUSG00000035429.13 ENSMUST00000206999.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=658;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4992217_G/A chr7:4992217 A ENSMUSG00000051550.10 ENSMUST00000108572.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=637;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4992217_G/A chr7:4992217 A ENSMUSG00000051550.10 ENSMUST00000159754.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4992217_G/A chr7:4992217 A ENSMUSG00000051550.10 ENSMUST00000160225.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=635;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4992217_G/A chr7:4992217 A ENSMUSG00000051550.10 ENSMUST00000160808.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2794;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4992217_G/A chr7:4992217 A ENSMUSG00000051550.10 ENSMUST00000162502.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1984;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_4992217_G/A chr7:4992217 A ENSMUSG00000051550.10 ENSMUST00000162731.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=635;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_5441411_C/T chr7:5441411 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_6386286_C/A chr7:6386286 A ENSMUSG00000062861.8 ENSMUST00000081022.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6386286_C/A chr7:6386286 A ENSMUSG00000062861.8 ENSMUST00000207086.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6386286_C/A chr7:6386286 A ENSMUSG00000055150.15 ENSMUST00000207314.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3681;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6386286_C/A chr7:6386286 A ENSMUSG00000055150.15 ENSMUST00000207347.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4577;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6386286_C/A chr7:6386286 A ENSMUSG00000062861.8 ENSMUST00000207465.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3250;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6386286_C/A chr7:6386286 A ENSMUSG00000062861.8 ENSMUST00000207809.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4171;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6386286_C/A chr7:6386286 A ENSMUSG00000062861.8 ENSMUST00000208338.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3468;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6386286_C/A chr7:6386286 A ENSMUSG00000062861.8 ENSMUST00000208949.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000002265.16 ENSMUST00000051209.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2418;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000002265.16 ENSMUST00000150182.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2420;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000002265.16 ENSMUST00000155910.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2408;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000098657.1 ENSMUST00000184527.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2148;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000051527.11 ENSMUST00000197117.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000051527.11 ENSMUST00000200535.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000051527.11 ENSMUST00000207899.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000051527.11 ENSMUST00000208195.1 Transcript non_coding_transcript_exon_variant 2262 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000051527.11 ENSMUST00000208642.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2857;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000051527.11 ENSMUST00000208662.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6732839_C/T chr7:6732839 T ENSMUSG00000051527.11 ENSMUST00000208952.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6802784_-/TTTTTTT chr7:6802783-6802784 TTTTTTT ENSMUSG00000092815.1 ENSMUST00000175074.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=803;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6802784_-/TTTTTTT chr7:6802783-6802784 TTTTTTT ENSMUSG00000051527.11 ENSMUST00000197117.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6802784_-/TTTTTTT chr7:6802783-6802784 TTTTTTT ENSMUSG00000051527.11 ENSMUST00000200535.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6802784_-/TTTTTTT chr7:6802783-6802784 TTTTTTT ENSMUSG00000109430.1 ENSMUST00000207150.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3067;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6824340_CACACA/- chr7:6824340-6824345 - ENSMUSG00000051527.11 ENSMUST00000197117.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6824340_CACACA/- chr7:6824340-6824345 - ENSMUSG00000051527.11 ENSMUST00000200535.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6970618_ACAC/-/AC chr7:6970618-6970621 - ENSMUSG00000051527.11 ENSMUST00000200535.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3399;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6970618_ACAC/-/AC chr7:6970618-6970621 AC ENSMUSG00000051527.11 ENSMUST00000200535.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3399;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6970618_ACAC/-/AC chr7:6970618-6970621 - ENSMUSG00000108043.2 ENSMUST00000203365.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6970618_ACAC/-/AC chr7:6970618-6970621 AC ENSMUSG00000108043.2 ENSMUST00000203365.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6970618_ACAC/-/AC chr7:6970618-6970621 - ENSMUSG00000108043.2 ENSMUST00000204486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_6970618_ACAC/-/AC chr7:6970618-6970621 AC ENSMUSG00000108043.2 ENSMUST00000204486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_7150064_A/- chr7:7150064 - ENSMUSG00000110339.1 ENSMUST00000169206.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3623;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_10148729_-/TTTTTTTTTT chr7:10148728-10148729 TTTTTTTTTT ENSMUSG00000091930.2 ENSMUST00000164918.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4477;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_10148729_-/TTTTTTTTTT chr7:10148728-10148729 TTTTTTTTTT ENSMUSG00000091930.2 ENSMUST00000232927.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4477;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_10179454_-/TTTA chr7:10179453-10179454 TTTA ENSMUSG00000091930.2 ENSMUST00000164918.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2880;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_10179454_-/TTTA chr7:10179453-10179454 TTTA ENSMUSG00000091930.2 ENSMUST00000232927.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2880;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_10256279_AAA/- chr7:10256279-10256281 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_11827569_A/T chr7:11827569 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_12170382_G/A chr7:12170382 A ENSMUSG00000096735.3 ENSMUST00000226953.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=897;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_12170382_G/A chr7:12170382 A ENSMUSG00000096735.3 ENSMUST00000227530.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=897;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_12912030_AA/- chr7:12912030-12912031 - ENSMUSG00000054715.11 ENSMUST00000055528.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3791;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_12912030_AA/- chr7:12912030-12912031 - ENSMUSG00000054715.11 ENSMUST00000117189.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2947;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_12912030_AA/- chr7:12912030-12912031 - ENSMUSG00000054715.11 ENSMUST00000119989.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3787;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_12912030_AA/- chr7:12912030-12912031 - ENSMUSG00000054715.11 ENSMUST00000120809.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4493;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_14613098_AA/- chr7:14613098-14613099 - ENSMUSG00000041596.12 ENSMUST00000044683.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_14613098_AA/- chr7:14613098-14613099 - ENSMUSG00000041596.12 ENSMUST00000173220.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3759;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_14613098_AA/- chr7:14613098-14613099 - ENSMUSG00000041596.12 ENSMUST00000173766.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3809;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_14613098_AA/- chr7:14613098-14613099 - ENSMUSG00000098520.1 ENSMUST00000184001.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3285;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_14613098_AA/- chr7:14613098-14613099 - ENSMUSG00000041596.12 ENSMUST00000190796.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_14699403_AAAA/- chr7:14699403-14699406 - ENSMUSG00000093665.2 ENSMUST00000176885.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3729;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_15440577_G/T chr7:15440577 T ENSMUSG00000093913.1 ENSMUST00000175654.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2421;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_15440577_G/T chr7:15440577 T ENSMUSG00000054310.16 ENSMUST00000181001.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_15575836_C/T chr7:15575836 T ENSMUSG00000066772.12 ENSMUST00000086122.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_16164030_C/G chr7:16164030 G ENSMUSG00000030376.8 ENSMUST00000168693.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_16164030_C/G chr7:16164030 G ENSMUSG00000030376.8 ENSMUST00000211649.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2967;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_16938898_T/A chr7:16938898 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_16995575_A/G chr7:16995575 G ENSMUSG00000041117.8 ENSMUST00000094805.4 Transcript missense_variant 2868 988 330 T/A Act/Gct - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_16995830_ATAGCAG/- chr7:16995830-16995836 - ENSMUSG00000041117.8 ENSMUST00000094805.4 Transcript frameshift_variant 3123-3129 1243-1249 415-417 IAE/X ATAGCAGag/ag - IMPACT=HIGH;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 - ENSMUSG00000004328.15 ENSMUST00000037762.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 T ENSMUSG00000004328.15 ENSMUST00000037762.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 - ENSMUSG00000004328.15 ENSMUST00000108492.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 T ENSMUSG00000004328.15 ENSMUST00000108492.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 - ENSMUSG00000004328.15 ENSMUST00000139224.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1668;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 T ENSMUSG00000004328.15 ENSMUST00000139224.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1668;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 - ENSMUSG00000004328.15 ENSMUST00000153833.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17052331_TT/-/T chr7:17052331-17052332 T ENSMUSG00000004328.15 ENSMUST00000153833.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17908177_G/A chr7:17908177 A ENSMUSG00000078793.10 ENSMUST00000072381.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_17961535_-/TATT chr7:17961534-17961535 TATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_18325860_TCTC/- chr7:18325860-18325863 - ENSMUSG00000108374.1 ENSMUST00000206790.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18469788_CA/TG chr7:18469788-18469789 TG ENSMUSG00000070799.4 ENSMUST00000094798.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4793;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18541361_TT/-/T chr7:18541361-18541362 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_18541361_TT/-/T chr7:18541361-18541362 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_18634411_A/G chr7:18634411 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_18670438_-/CTTC chr7:18670437-18670438 CTTC ENSMUSG00000063305.10 ENSMUST00000076677.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3928;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18670438_-/CTTC chr7:18670437-18670438 CTTC ENSMUSG00000063305.10 ENSMUST00000108482.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3669;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18670438_-/CTTC chr7:18670437-18670438 CTTC ENSMUSG00000109180.1 ENSMUST00000208052.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2474;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18739502_T/- chr7:18739502 - ENSMUSG00000108835.1 ENSMUST00000207638.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1046;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18739502_T/- chr7:18739502 - ENSMUSG00000109292.1 ENSMUST00000207985.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1876;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18739502_T/- chr7:18739502 - ENSMUSG00000109023.1 ENSMUST00000208194.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2825;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18985327_TTTT/- chr7:18985327-18985330 - ENSMUSG00000051965.8 ENSMUST00000063563.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2070;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18985327_TTTT/- chr7:18985327-18985330 - ENSMUSG00000074355.2 ENSMUST00000098778.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4224;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_18985327_TTTT/- chr7:18985327-18985330 - ENSMUSG00000108428.1 ENSMUST00000205810.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2229;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000048502.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000065543.1 ENSMUST00000083609.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2825;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000117338.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000120595.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000141718.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000141792.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000144054.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000146095.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19184387_CACA/- chr7:19184387-19184390 - ENSMUSG00000040811.15 ENSMUST00000148246.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19199080_TT/- chr7:19199080-19199081 - ENSMUSG00000040811.15 ENSMUST00000048502.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19199080_TT/- chr7:19199080-19199081 - ENSMUSG00000040811.15 ENSMUST00000117338.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19199080_TT/- chr7:19199080-19199081 - ENSMUSG00000040811.15 ENSMUST00000120595.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19199080_TT/- chr7:19199080-19199081 - ENSMUSG00000040811.15 ENSMUST00000148246.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19286592_GTGTGT/- chr7:19286592-19286597 - ENSMUSG00000030401.16 ENSMUST00000032559.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19286592_GTGTGT/- chr7:19286592-19286597 - ENSMUSG00000030401.16 ENSMUST00000108468.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4472;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19286592_GTGTGT/- chr7:19286592-19286597 - ENSMUSG00000030401.16 ENSMUST00000209186.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447031_A/C chr7:19447031 C ENSMUSG00000030397.10 ENSMUST00000085715.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447031_A/C chr7:19447031 C ENSMUSG00000030397.10 ENSMUST00000207767.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447031_A/C chr7:19447031 C ENSMUSG00000030397.10 ENSMUST00000209011.1 Transcript non_coding_transcript_exon_variant 478 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447031_A/C chr7:19447031 C ENSMUSG00000030397.10 ENSMUST00000209058.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447037_A/C chr7:19447037 C ENSMUSG00000030397.10 ENSMUST00000085715.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447037_A/C chr7:19447037 C ENSMUSG00000030397.10 ENSMUST00000207767.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447037_A/C chr7:19447037 C ENSMUSG00000030397.10 ENSMUST00000209011.1 Transcript non_coding_transcript_exon_variant 472 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19447037_A/C chr7:19447037 C ENSMUSG00000030397.10 ENSMUST00000209058.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19474788_TA/T/AA chr7:19474788-19474789 T ENSMUSG00000011263.16 ENSMUST00000137613.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19474788_TA/T/AA chr7:19474788-19474789 AA ENSMUSG00000011263.16 ENSMUST00000137613.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19555688_AAA/- chr7:19555688-19555690 - ENSMUSG00000051403.9 ENSMUST00000058444.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19766593_CACA/- chr7:19766593-19766596 - ENSMUSG00000002980.14 ENSMUST00000003061.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19766593_CACA/- chr7:19766593-19766596 - ENSMUSG00000002980.14 ENSMUST00000133271.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19766593_CACA/- chr7:19766593-19766596 - ENSMUSG00000002980.14 ENSMUST00000133427.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=391;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19766593_CACA/- chr7:19766593-19766596 - ENSMUSG00000002980.14 ENSMUST00000155244.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19766593_CACA/- chr7:19766593-19766596 - ENSMUSG00000097226.1 ENSMUST00000181637.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4015;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_19766593_CACA/- chr7:19766593-19766596 - ENSMUSG00000109136.1 ENSMUST00000208280.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4339;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_20078819_C/T chr7:20078819 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_20079071_T/C chr7:20079071 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_20829601_G/A chr7:20829601 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_21076908_T/C chr7:21076908 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_22776593_A/G chr7:22776593 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_23366903_-/TT chr7:23366902-23366903 TT ENSMUSG00000045693.8 ENSMUST00000076470.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_23366903_-/TT chr7:23366902-23366903 TT ENSMUSG00000045693.8 ENSMUST00000133392.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4632;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24334399_GAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGAGGAGAGAGGATAGGAGGGGAGAGTAGAGGAGGGGAGAGGAGAAGGAAGGAGGGGAGGG/- chr7:24334399-24334498 - ENSMUSG00000055826.5 ENSMUST00000069562.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=463;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24334399_GAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGGGAGGAGAGGAGAGAGGATAGGAGGGGAGAGTAGAGGAGGGGAGAGGAGAAGGAAGGAGGGGAGGG/- chr7:24334399-24334498 - ENSMUSG00000088354.2 ENSMUST00000157729.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1842;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24360428_ACAC/- chr7:24360428-24360431 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000003379.7 ENSMUST00000003469.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3814;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000047873.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000098683.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000117419.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000117796.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000127761.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000129383.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1627;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000145783.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000151121.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1633;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000205295.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000206011.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000206028.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000206508.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_24906011_AGAG/- chr7:24906011-24906014 - ENSMUSG00000040940.18 ENSMUST00000206906.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_-/C chr7:25310233-25310234 C ENSMUSG00000043843.16 ENSMUST00000108409.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_-/C chr7:25310233-25310234 C ENSMUSG00000043843.16 ENSMUST00000119703.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_-/C chr7:25310233-25310234 C ENSMUSG00000043843.16 ENSMUST00000140016.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1407;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_-/C chr7:25310233-25310234 C ENSMUSG00000043843.16 ENSMUST00000205639.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4806;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_T/G chr7:25310234 G ENSMUSG00000043843.16 ENSMUST00000108409.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_T/G chr7:25310234 G ENSMUSG00000043843.16 ENSMUST00000119703.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_T/G chr7:25310234 G ENSMUSG00000043843.16 ENSMUST00000140016.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25310234_T/G chr7:25310234 G ENSMUSG00000043843.16 ENSMUST00000205639.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4806;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25399266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr7:25399265-25399266 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000003123.15 ENSMUST00000003207.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2886;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25399266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr7:25399265-25399266 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000060188.6 ENSMUST00000074040.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=787;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25399266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr7:25399265-25399266 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000003123.15 ENSMUST00000105177.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=556;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25399266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr7:25399265-25399266 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000003123.15 ENSMUST00000149349.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=555;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25399266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr7:25399265-25399266 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000060188.6 ENSMUST00000200880.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=787;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25399266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr7:25399265-25399266 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000053714.8 ENSMUST00000206300.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25399266_-/TTTTTTTTTTTTTTTTTTTTTTTTTTT chr7:25399265-25399266 TTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000053714.8 ENSMUST00000206436.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25682147_GTGT/- chr7:25682147-25682150 - ENSMUSG00000002603.15 ENSMUST00000002678.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4852;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25682147_GTGT/- chr7:25682147-25682150 - ENSMUSG00000063439.7 ENSMUST00000108403.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25682147_GTGT/- chr7:25682147-25682150 - ENSMUSG00000063439.7 ENSMUST00000205325.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25682147_GTGT/- chr7:25682147-25682150 - ENSMUSG00000063439.7 ENSMUST00000205658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25682147_GTGT/- chr7:25682147-25682150 - ENSMUSG00000063439.7 ENSMUST00000206913.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 C ENSMUSG00000002602.16 ENSMUST00000002677.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 TC ENSMUSG00000002602.16 ENSMUST00000002677.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 C ENSMUSG00000002602.16 ENSMUST00000085948.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 TC ENSMUSG00000002602.16 ENSMUST00000085948.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 C ENSMUSG00000002602.16 ENSMUST00000132989.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 TC ENSMUSG00000002602.16 ENSMUST00000132989.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 C ENSMUSG00000002602.16 ENSMUST00000137383.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 TC ENSMUSG00000002602.16 ENSMUST00000137383.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 C ENSMUSG00000002602.16 ENSMUST00000147680.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25786319_T/C/TC chr7:25786319 TC ENSMUSG00000002602.16 ENSMUST00000147680.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_25967619_TT/- chr7:25967619-25967620 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_26133381_ACAC/-/AC chr7:26133381-26133384 - ENSMUSG00000108544.1 ENSMUST00000206238.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1369;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26133381_ACAC/-/AC chr7:26133381-26133384 AC ENSMUSG00000108544.1 ENSMUST00000206238.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1369;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26283831_C/T chr7:26283831 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_26755820_T/G chr7:26755820 G ENSMUSG00000066704.6 ENSMUST00000077855.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1322;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26755820_T/G chr7:26755820 G ENSMUSG00000066704.6 ENSMUST00000132315.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1343;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26776157_GTGT/- chr7:26776157-26776160 - ENSMUSG00000066704.6 ENSMUST00000077855.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3527;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26776157_GTGT/- chr7:26776157-26776160 - ENSMUSG00000066704.6 ENSMUST00000138018.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4766;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26865083_AAAA/- chr7:26865083-26865086 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_26943603_-/C chr7:26943602-26943603 C ENSMUSG00000091867.2 ENSMUST00000170227.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4222;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26943603_-/C chr7:26943602-26943603 C ENSMUSG00000108487.1 ENSMUST00000206638.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_26943603_-/C chr7:26943602-26943603 C ENSMUSG00000091867.2 ENSMUST00000206957.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4218;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27373701_T/C chr7:27373701 C ENSMUSG00000011751.16 ENSMUST00000011895.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27373701_T/C chr7:27373701 C ENSMUSG00000011751.16 ENSMUST00000108362.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27373701_T/C chr7:27373701 C ENSMUSG00000011751.16 ENSMUST00000108363.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27373701_T/C chr7:27373701 C ENSMUSG00000011751.16 ENSMUST00000108364.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27373701_T/C chr7:27373701 C ENSMUSG00000011751.16 ENSMUST00000172269.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27466149_A/G chr7:27466149 G ENSMUSG00000040466.16 ENSMUST00000037399.15 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=5;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27466149_A/G chr7:27466149 G ENSMUSG00000040466.16 ENSMUST00000108357.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=165;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27466149_A/G chr7:27466149 G ENSMUSG00000040466.16 ENSMUST00000108358.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=151;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27466149_A/G chr7:27466149 G ENSMUSG00000082016.3 ENSMUST00000117129.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3622;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27466149_A/G chr7:27466149 G ENSMUSG00000040466.16 ENSMUST00000153644.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3454;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27580804_C/T chr7:27580804 T ENSMUSG00000049643.15 ENSMUST00000067386.13 Transcript synonymous_variant 1406 1209 403 S agC/agT - IMPACT=LOW;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27580804_C/T chr7:27580804 T ENSMUSG00000049643.15 ENSMUST00000186501.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=384;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27580804_C/T chr7:27580804 T ENSMUSG00000049643.15 ENSMUST00000187032.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27580804_C/T chr7:27580804 T ENSMUSG00000049643.15 ENSMUST00000187960.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_27580804_C/T chr7:27580804 T ENSMUSG00000049643.15 ENSMUST00000190656.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_28282082_T/A chr7:28282082 A ENSMUSG00000046750.17 ENSMUST00000056589.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_28282082_T/A chr7:28282082 A ENSMUSG00000070705.3 ENSMUST00000094651.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2593;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_28282082_T/A chr7:28282082 A ENSMUSG00000046750.17 ENSMUST00000156408.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4978;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_29845136_C/T chr7:29845136 T ENSMUSG00000050855.16 ENSMUST00000085792.4 Transcript missense_variant 1564 1345 449 E/K Gaa/Aaa - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_29845136_C/T chr7:29845136 T ENSMUSG00000050855.16 ENSMUST00000108223.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_29845136_C/T chr7:29845136 T ENSMUSG00000050855.16 ENSMUST00000145098.1 Transcript non_coding_transcript_exon_variant 1826 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_29845140_G/A chr7:29845140 A ENSMUSG00000050855.16 ENSMUST00000085792.4 Transcript synonymous_variant 1560 1341 447 T acC/acT - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_29845140_G/A chr7:29845140 A ENSMUSG00000050855.16 ENSMUST00000108223.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_29845140_G/A chr7:29845140 A ENSMUSG00000050855.16 ENSMUST00000145098.1 Transcript non_coding_transcript_exon_variant 1822 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000049421.13 ENSMUST00000050735.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000049421.13 ENSMUST00000108200.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000093495.1 ENSMUST00000116939.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2431;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000049421.13 ENSMUST00000123095.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000049421.13 ENSMUST00000130526.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000049421.13 ENSMUST00000134365.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000049421.13 ENSMUST00000149302.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30098404_TCTCTC/- chr7:30098404-30098409 - ENSMUSG00000049421.13 ENSMUST00000182136.1 Transcript non_coding_transcript_exon_variant 248-253 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30638127_GTGT/- chr7:30638127-30638130 - ENSMUSG00000036733.16 ENSMUST00000042726.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2871;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30638127_GTGT/- chr7:30638127-30638130 - ENSMUSG00000036733.16 ENSMUST00000108141.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2869;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30638127_GTGT/- chr7:30638127-30638130 - ENSMUSG00000006311.8 ENSMUST00000108147.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2275;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_30638127_GTGT/- chr7:30638127-30638130 - ENSMUSG00000094365.1 ENSMUST00000146232.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2871;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_31156284_GCCCCG/- chr7:31156284-31156289 - ENSMUSG00000097149.1 ENSMUST00000181958.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3577;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_31156284_GCCCCG/- chr7:31156284-31156289 - ENSMUSG00000001248.15 ENSMUST00000186723.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=388;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_31156284_GCCCCG/- chr7:31156284-31156289 - ENSMUSG00000100985.1 ENSMUST00000187312.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_31156284_GCCCCG/- chr7:31156284-31156289 - ENSMUSG00000001248.15 ENSMUST00000187679.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4215;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_31488917_A/T chr7:31488917 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_31893278_T/C chr7:31893278 C ENSMUSG00000101765.1 ENSMUST00000186640.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3227;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34328837_T/C chr7:34328837 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_34679696_-/GT chr7:34679695-34679696 GT ENSMUSG00000060402.7 ENSMUST00000078686.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34679696_-/GT chr7:34679695-34679696 GT ENSMUSG00000060402.7 ENSMUST00000135295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34679696_-/GT chr7:34679695-34679696 GT ENSMUSG00000060402.7 ENSMUST00000154629.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34679696_-/GT chr7:34679695-34679696 GT ENSMUSG00000060402.7 ENSMUST00000205259.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34791426_GAAGAA/- chr7:34791426-34791431 - ENSMUSG00000060402.7 ENSMUST00000078686.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34791426_GAAGAA/- chr7:34791426-34791431 - ENSMUSG00000060402.7 ENSMUST00000135295.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34791426_GAAGAA/- chr7:34791426-34791431 - ENSMUSG00000060402.7 ENSMUST00000154629.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34791426_GAAGAA/- chr7:34791426-34791431 - ENSMUSG00000060402.7 ENSMUST00000205259.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_34791426_GAAGAA/- chr7:34791426-34791431 - ENSMUSG00000060402.7 ENSMUST00000205390.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 - ENSMUSG00000034867.16 ENSMUST00000040844.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 TG ENSMUSG00000034867.16 ENSMUST00000040844.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 - ENSMUSG00000034867.16 ENSMUST00000186245.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 TG ENSMUSG00000034867.16 ENSMUST00000186245.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 - ENSMUSG00000034867.16 ENSMUST00000188906.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=640;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 TG ENSMUSG00000034867.16 ENSMUST00000188906.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=640;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 - ENSMUSG00000034867.16 ENSMUST00000190503.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 TG ENSMUSG00000034867.16 ENSMUST00000190503.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 - ENSMUSG00000034867.16 ENSMUST00000205801.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 TG ENSMUSG00000034867.16 ENSMUST00000205801.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 - ENSMUSG00000034867.16 ENSMUST00000206157.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 TG ENSMUSG00000034867.16 ENSMUST00000206157.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 - ENSMUSG00000034867.16 ENSMUST00000206472.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35602283_TGTG/-/TG chr7:35602283-35602286 TG ENSMUSG00000034867.16 ENSMUST00000206472.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_35978962_TGTG/-/TG/TGTGTG chr7:35978962-35978965 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_35978962_TGTG/-/TG/TGTGTG chr7:35978962-35978965 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_35978962_TGTG/-/TG/TGTGTG chr7:35978962-35978965 TGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_36133459_A/T chr7:36133459 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_36614522_ATGGCATGT/- chr7:36614522-36614530 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_36681876_C/A chr7:36681876 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_37167085_-/AGAA chr7:37167084-37167085 AGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_37283081_-/GATA chr7:37283080-37283081 GATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_38466622_G/A chr7:38466622 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_38466626_C/T chr7:38466626 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_38502161_G/A chr7:38502161 A ENSMUSG00000100169.1 ENSMUST00000186462.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_38528649_A/T chr7:38528649 T ENSMUSG00000060565.5 ENSMUST00000079759.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=456;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_38528649_A/T chr7:38528649 T ENSMUSG00000100169.1 ENSMUST00000186462.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_38880225_C/A chr7:38880225 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_39125473_A/C chr7:39125473 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_39168621_T/C chr7:39168621 C ENSMUSG00000101454.1 ENSMUST00000188190.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1879;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_39514962_C/T chr7:39514962 T ENSMUSG00000068959.6 ENSMUST00000108015.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2804;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_39526952_TT/- chr7:39526952-39526953 - ENSMUSG00000068959.6 ENSMUST00000108015.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_41454009_-/A chr7:41454008-41454009 A ENSMUSG00000092592.1 ENSMUST00000094532.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42683089_TCTCTG/- chr7:42683089-42683094 - ENSMUSG00000069727.5 ENSMUST00000107992.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 - ENSMUSG00000090751.2 ENSMUST00000163803.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 TATATA ENSMUSG00000090751.2 ENSMUST00000163803.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 - ENSMUSG00000090751.2 ENSMUST00000232761.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 TATATA ENSMUSG00000090751.2 ENSMUST00000232761.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 - ENSMUSG00000090751.2 ENSMUST00000233303.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 TATATA ENSMUSG00000090751.2 ENSMUST00000233303.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 - ENSMUSG00000090751.2 ENSMUST00000233726.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_42923054_TATA/-/TATATA chr7:42923054-42923057 TATATA ENSMUSG00000090751.2 ENSMUST00000233726.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43165532_G/A chr7:43165532 A ENSMUSG00000064194.10 ENSMUST00000205912.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 - ENSMUSG00000030468.12 ENSMUST00000005592.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1754;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 AC ENSMUSG00000030468.12 ENSMUST00000005592.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1754;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 - ENSMUSG00000030468.12 ENSMUST00000123042.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4929;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 AC ENSMUSG00000030468.12 ENSMUST00000123042.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4929;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 - ENSMUSG00000030468.12 ENSMUST00000124502.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1818;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 AC ENSMUSG00000030468.12 ENSMUST00000124502.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1818;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 - ENSMUSG00000030468.12 ENSMUST00000124885.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4034;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 AC ENSMUSG00000030468.12 ENSMUST00000124885.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4034;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 - ENSMUSG00000030468.12 ENSMUST00000131744.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2023;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 AC ENSMUSG00000030468.12 ENSMUST00000131744.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2023;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 - ENSMUSG00000030468.12 ENSMUST00000154322.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1789;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43406445_ACACAC/-/AC chr7:43406445-43406450 AC ENSMUSG00000030468.12 ENSMUST00000154322.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1789;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43653992_CACA/- chr7:43653992-43653995 - ENSMUSG00000030472.9 ENSMUST00000032663.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4697;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43653992_CACA/- chr7:43653992-43653995 - ENSMUSG00000030474.9 ENSMUST00000032667.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43653992_CACA/- chr7:43653992-43653995 - ENSMUSG00000030474.9 ENSMUST00000206421.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43655383_C/T chr7:43655383 T ENSMUSG00000030474.9 ENSMUST00000032667.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43655383_C/T chr7:43655383 T ENSMUSG00000030474.9 ENSMUST00000206421.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43655389_C/T chr7:43655389 T ENSMUSG00000030474.9 ENSMUST00000032667.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43655389_C/T chr7:43655389 T ENSMUSG00000030474.9 ENSMUST00000206421.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43796399_AAAA/- chr7:43796399-43796402 - ENSMUSG00000047884.6 ENSMUST00000005891.6 Transcript 3_prime_UTR_variant 1118-1121 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43796399_AAAA/- chr7:43796399-43796402 - ENSMUSG00000064023.4 ENSMUST00000085461.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1175;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43796399_AAAA/- chr7:43796399-43796402 - ENSMUSG00000097178.7 ENSMUST00000181454.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43796399_AAAA/- chr7:43796399-43796402 - ENSMUSG00000097178.7 ENSMUST00000205527.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=422;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_43796399_AAAA/- chr7:43796399-43796402 - ENSMUSG00000064023.4 ENSMUST00000205537.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1194;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000003421.13 ENSMUST00000003513.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000003421.13 ENSMUST00000107829.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000003421.13 ENSMUST00000209308.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000003421.13 ENSMUST00000209901.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000003421.13 ENSMUST00000210088.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000003421.13 ENSMUST00000210520.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000007837.11 ENSMUST00000210690.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4808;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000007837.11 ENSMUST00000211014.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4808;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45067485_ACACAC/- chr7:45067485-45067490 - ENSMUSG00000003421.13 ENSMUST00000211465.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000003513.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000003513.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000107829.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000107829.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000209243.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1510;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000209243.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1510;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000209308.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000209308.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000209901.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000209901.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000210088.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000210088.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000210520.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000210520.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000210668.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4358;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000210668.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4358;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000210998.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3661;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000210998.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3661;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 - ENSMUSG00000003421.13 ENSMUST00000211465.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45072049_GG/-/G chr7:45072049-45072050 G ENSMUSG00000003421.13 ENSMUST00000211465.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45351053_GTGT/- chr7:45351053-45351056 - ENSMUSG00000003863.18 ENSMUST00000003961.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45351053_GTGT/- chr7:45351053-45351056 - ENSMUSG00000003863.18 ENSMUST00000210248.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45351053_GTGT/- chr7:45351053-45351056 - ENSMUSG00000003863.18 ENSMUST00000210479.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45351053_GTGT/- chr7:45351053-45351056 - ENSMUSG00000003863.18 ENSMUST00000210586.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45351053_GTGT/- chr7:45351053-45351056 - ENSMUSG00000003863.18 ENSMUST00000211067.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45842540_TATA/-/TA chr7:45842540-45842543 - ENSMUSG00000002771.12 ENSMUST00000002848.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45842540_TATA/-/TA chr7:45842540-45842543 TA ENSMUSG00000002771.12 ENSMUST00000002848.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45842540_TATA/-/TA chr7:45842540-45842543 - ENSMUSG00000002771.12 ENSMUST00000211713.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_45842540_TATA/-/TA chr7:45842540-45842543 TA ENSMUSG00000002771.12 ENSMUST00000211713.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_46518675_-/G chr7:46518674-46518675 G ENSMUSG00000030839.12 ENSMUST00000033127.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_46518675_-/G chr7:46518674-46518675 G ENSMUSG00000030839.12 ENSMUST00000156147.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_46518675_-/G chr7:46518674-46518675 G ENSMUSG00000030839.12 ENSMUST00000216505.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_47070765_-/G chr7:47070764-47070765 G ENSMUSG00000111473.1 ENSMUST00000217248.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_47138692_-/TTA chr7:47138691-47138692 TTA ENSMUSG00000109200.1 ENSMUST00000207829.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3465;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_47138695_-/T chr7:47138694-47138695 T ENSMUSG00000109200.1 ENSMUST00000207829.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3462;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_47748283_-/ATCT chr7:47748282-47748283 ATCT ENSMUSG00000077110.1 ENSMUST00000103922.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4439;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_47763333_C/T chr7:47763333 T ENSMUSG00000100920.1 ENSMUST00000191227.1 Transcript non_coding_transcript_exon_variant 343 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_48019949_-/C chr7:48019948-48019949 C ENSMUSG00000070552.2 ENSMUST00000094390.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1022;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_49013626_G/A chr7:49013626 A ENSMUSG00000052512.17 ENSMUST00000183659.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_49017862_GTGT/- chr7:49017862-49017865 - ENSMUSG00000052512.17 ENSMUST00000183659.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_49647414_G/A chr7:49647414 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_49647418_-/TGGAAAACC chr7:49647417-49647418 TGGAAAACC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_50149277_G/A chr7:50149277 A ENSMUSG00000055409.14 ENSMUST00000081872.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50149277_G/A chr7:50149277 A ENSMUSG00000055409.14 ENSMUST00000107603.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50149277_G/A chr7:50149277 A ENSMUSG00000055409.14 ENSMUST00000145096.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50149277_G/A chr7:50149277 A ENSMUSG00000055409.14 ENSMUST00000151721.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50149277_G/A chr7:50149277 A ENSMUSG00000055409.14 ENSMUST00000154410.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50358516_-/AC chr7:50358515-50358516 AC ENSMUSG00000055409.14 ENSMUST00000081872.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50358516_-/AC chr7:50358515-50358516 AC ENSMUSG00000055409.14 ENSMUST00000107603.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50358516_-/AC chr7:50358515-50358516 AC ENSMUSG00000055409.14 ENSMUST00000151721.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530549_T/G chr7:50530549 G ENSMUSG00000055409.14 ENSMUST00000081872.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530549_T/G chr7:50530549 G ENSMUSG00000055409.14 ENSMUST00000107603.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530549_T/G chr7:50530549 G ENSMUSG00000085265.1 ENSMUST00000134584.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530549_T/G chr7:50530549 G ENSMUSG00000055409.14 ENSMUST00000151721.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530552_C/T chr7:50530552 T ENSMUSG00000055409.14 ENSMUST00000081872.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530552_C/T chr7:50530552 T ENSMUSG00000055409.14 ENSMUST00000107603.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530552_C/T chr7:50530552 T ENSMUSG00000085265.1 ENSMUST00000134584.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50530552_C/T chr7:50530552 T ENSMUSG00000055409.14 ENSMUST00000151721.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50547410_A/G chr7:50547410 G ENSMUSG00000055409.14 ENSMUST00000081872.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50547410_A/G chr7:50547410 G ENSMUSG00000055409.14 ENSMUST00000107603.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50547410_A/G chr7:50547410 G ENSMUSG00000085265.1 ENSMUST00000134584.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50547410_A/G chr7:50547410 G ENSMUSG00000055409.14 ENSMUST00000151721.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_50547410_A/G chr7:50547410 G ENSMUSG00000085265.1 ENSMUST00000152166.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1530;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_51157752_C/A/CA chr7:51157752 A ENSMUSG00000109202.1 ENSMUST00000209086.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2328;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_51157752_C/A/CA chr7:51157752 CA ENSMUSG00000109202.1 ENSMUST00000209086.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2328;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_51250312_AGAG/-/AG chr7:51250312-51250315 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_51250312_AGAG/-/AG chr7:51250312-51250315 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_52880780_AAA/-/AA/AAAA chr7:52880780-52880782 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_52880780_AAA/-/AA/AAAA chr7:52880780-52880782 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_52880780_AAA/-/AA/AAAA chr7:52880780-52880782 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_53020881_A/- chr7:53020881 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_53143254_A/- chr7:53143254 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_53230208_-/TCTA chr7:53230207-53230208 TCTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_53558114_C/T chr7:53558114 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_53946132_ACAC/-/AC chr7:53946132-53946135 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_53946132_ACAC/-/AC chr7:53946132-53946135 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_56679340_CACA/-/CA chr7:56679340-56679343 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_56679340_CACA/-/CA chr7:56679340-56679343 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_56686589_-/TATATATATGTG chr7:56686588-56686589 TATATATATGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_57968538_T/C chr7:57968538 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_57968541_C/G chr7:57968541 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_58100734_G/A chr7:58100734 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_58245380_C/G chr7:58245380 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_58245390_C/G chr7:58245390 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_59188815_T/G chr7:59188815 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_59336264_-/TCTA chr7:59336263-59336264 TCTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_59473055_A/G chr7:59473055 G ENSMUSG00000093943.1 ENSMUST00000102021.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2567;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473055_A/G chr7:59473055 G ENSMUSG00000096041.1 ENSMUST00000177628.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1073;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473055_A/G chr7:59473055 G ENSMUSG00000094364.1 ENSMUST00000177865.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4814;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473055_A/G chr7:59473055 G ENSMUSG00000094308.1 ENSMUST00000178053.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4438;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473055_A/G chr7:59473055 G ENSMUSG00000095009.1 ENSMUST00000178712.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2943;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473055_A/G chr7:59473055 G ENSMUSG00000095476.1 ENSMUST00000179157.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=721;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473087_C/A chr7:59473087 A ENSMUSG00000093943.1 ENSMUST00000102021.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2535;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473087_C/A chr7:59473087 A ENSMUSG00000096041.1 ENSMUST00000177628.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1105;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473087_C/A chr7:59473087 A ENSMUSG00000094364.1 ENSMUST00000177865.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4846;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473087_C/A chr7:59473087 A ENSMUSG00000094308.1 ENSMUST00000178053.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473087_C/A chr7:59473087 A ENSMUSG00000095009.1 ENSMUST00000178712.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2975;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59473087_C/A chr7:59473087 A ENSMUSG00000095476.1 ENSMUST00000179157.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=689;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59719736_C/A chr7:59719736 A ENSMUSG00000096082.1 ENSMUST00000178062.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1389;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59719736_C/A chr7:59719736 A ENSMUSG00000096110.1 ENSMUST00000178690.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3584;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59719736_C/A chr7:59719736 A ENSMUSG00000096502.1 ENSMUST00000178947.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1055;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59719736_C/A chr7:59719736 A ENSMUSG00000095060.1 ENSMUST00000179963.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3908;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59719736_C/A chr7:59719736 A ENSMUSG00000100826.6 ENSMUST00000185693.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59719736_C/A chr7:59719736 A ENSMUSG00000100826.6 ENSMUST00000188162.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 C ENSMUSG00000093971.1 ENSMUST00000177982.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1349;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 GTG ENSMUSG00000093971.1 ENSMUST00000177982.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1349;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 C ENSMUSG00000094599.1 ENSMUST00000178370.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3867;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 GTG ENSMUSG00000094599.1 ENSMUST00000178370.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3867;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 C ENSMUSG00000094039.1 ENSMUST00000179927.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1092;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 GTG ENSMUSG00000094039.1 ENSMUST00000179927.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1092;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 C ENSMUSG00000096190.1 ENSMUST00000179955.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3650;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 GTG ENSMUSG00000096190.1 ENSMUST00000179955.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3650;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 C ENSMUSG00000100826.6 ENSMUST00000188162.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_59888242_CTG/C/GTG chr7:59888242-59888244 GTG ENSMUSG00000100826.6 ENSMUST00000188162.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_60065876_C/T chr7:60065876 T ENSMUSG00000102252.5 ENSMUST00000098402.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_60892133_AAAA/- chr7:60892133-60892136 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_61991521_AA/- chr7:61991521-61991522 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_62360536_ATAT/- chr7:62360536-62360539 - ENSMUSG00000108986.1 ENSMUST00000207232.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_62640072_C/T chr7:62640072 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_63334840_-/AGAA chr7:63334839-63334840 AGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_63980531_TTT/-/TT chr7:63980531-63980533 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_63980531_TTT/-/TT chr7:63980531-63980533 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000085222.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000177102.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000205348.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000205434.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000205610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000205684.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4059;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000205731.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000205960.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=961;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000205994.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000206263.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000206277.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000206314.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000108770.1 ENSMUST00000206404.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=802;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000206453.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1499;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64212388_C/T chr7:64212388 T ENSMUSG00000030523.18 ENSMUST00000206706.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64494253_C/- chr7:64494253 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_64590157_A/T chr7:64590157 T ENSMUSG00000030519.14 ENSMUST00000032732.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64590157_A/T chr7:64590157 T ENSMUSG00000030519.14 ENSMUST00000205604.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_64590157_A/T chr7:64590157 T ENSMUSG00000030519.14 ENSMUST00000205613.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_65913836_A/G chr7:65913836 G ENSMUSG00000030513.14 ENSMUST00000055576.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_65913836_A/G chr7:65913836 G ENSMUSG00000030513.14 ENSMUST00000098391.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_65913836_A/G chr7:65913836 G ENSMUSG00000030513.14 ENSMUST00000176199.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_65913836_A/G chr7:65913836 G ENSMUSG00000030513.14 ENSMUST00000176209.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_66481822_AA/- chr7:66481822-66481823 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_67716952_G/- chr7:67716952 - ENSMUSG00000030555.16 ENSMUST00000032774.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_67716952_G/- chr7:67716952 - ENSMUSG00000030555.16 ENSMUST00000107470.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_67716952_G/- chr7:67716952 - ENSMUSG00000030555.16 ENSMUST00000107471.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_67716952_G/- chr7:67716952 - ENSMUSG00000030555.16 ENSMUST00000126093.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_67716952_G/- chr7:67716952 - ENSMUSG00000030555.16 ENSMUST00000137919.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_67716952_G/- chr7:67716952 - ENSMUSG00000030555.16 ENSMUST00000208764.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_68455539_T/C chr7:68455539 C ENSMUSG00000108828.1 ENSMUST00000207356.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_68455539_T/C chr7:68455539 C ENSMUSG00000108828.1 ENSMUST00000208300.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_68517811_G/A chr7:68517811 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_68565516_GTGT/- chr7:68565516-68565519 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_68941245_G/T chr7:68941245 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_68967998_T/C chr7:68967998 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_70441771_ATAT/-/AT chr7:70441771-70441774 - ENSMUSG00000108869.1 ENSMUST00000207723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_70441771_ATAT/-/AT chr7:70441771-70441774 AT ENSMUSG00000108869.1 ENSMUST00000207723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_70441771_ATAT/-/AT chr7:70441771-70441774 - ENSMUSG00000100005.7 ENSMUST00000207952.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_70441771_ATAT/-/AT chr7:70441771-70441774 AT ENSMUSG00000100005.7 ENSMUST00000207952.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_70520521_GTGT/- chr7:70520521-70520524 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000189063.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=119;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099558.1 ENSMUST00000190004.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000207028.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000207076.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000207120.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000207149.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000207237.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000207268.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000208757.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000208934.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000208988.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000209171.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71370209_CACACA/- chr7:71370209-71370214 - ENSMUSG00000099853.3 ENSMUST00000209182.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_71631382_CA/C/AA chr7:71631382-71631383 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_71631382_CA/C/AA chr7:71631382-71631383 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_71824914_G/A chr7:71824914 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_71997508_CTCT/- chr7:71997508-71997511 - ENSMUSG00000108800.1 ENSMUST00000205268.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_72021793_ACTCT/A/ACT/TCTCT chr7:72021793-72021797 A ENSMUSG00000108800.1 ENSMUST00000205268.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_72021793_ACTCT/A/ACT/TCTCT chr7:72021793-72021797 ACT ENSMUSG00000108800.1 ENSMUST00000205268.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_72021793_ACTCT/A/ACT/TCTCT chr7:72021793-72021797 TCTCT ENSMUSG00000108800.1 ENSMUST00000205268.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_72255520_T/G chr7:72255520 G ENSMUSG00000032776.9 ENSMUST00000079323.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_72255520_T/G chr7:72255520 G ENSMUSG00000032776.9 ENSMUST00000206755.1 Transcript non_coding_transcript_exon_variant 4250 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_72653008_C/T chr7:72653008 T ENSMUSG00000081895.3 ENSMUST00000119383.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3697;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_72835868_A/T chr7:72835868 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_73048832_A/G chr7:73048832 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_73204940_GG/- chr7:73204940-73204941 - ENSMUSG00000108513.1 ENSMUST00000205509.1 Transcript non_coding_transcript_exon_variant 839-840 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_73260044_TT/-/T chr7:73260044-73260045 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_73260044_TT/-/T chr7:73260044-73260045 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_74029290_TGTG/- chr7:74029290-74029293 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_74727720_AGAG/-/AG chr7:74727720-74727723 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_74727720_AGAG/-/AG chr7:74727720-74727723 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_74928910_GTGT/- chr7:74928910-74928913 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_76064853_A/C chr7:76064853 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_76064855_T/C chr7:76064855 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_76578860_TT/-/T chr7:76578860-76578861 - ENSMUSG00000025754.11 ENSMUST00000026854.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_76578860_TT/-/T chr7:76578860-76578861 T ENSMUSG00000025754.11 ENSMUST00000026854.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_76578860_TT/-/T chr7:76578860-76578861 - ENSMUSG00000025754.11 ENSMUST00000107442.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_76578860_TT/-/T chr7:76578860-76578861 T ENSMUSG00000025754.11 ENSMUST00000107442.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_76578860_TT/-/T chr7:76578860-76578861 - ENSMUSG00000025754.11 ENSMUST00000156166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_76578860_TT/-/T chr7:76578860-76578861 T ENSMUSG00000025754.11 ENSMUST00000156166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_76708198_A/G chr7:76708198 G ENSMUSG00000025754.11 ENSMUST00000107442.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_76708198_A/G chr7:76708198 G ENSMUSG00000025754.11 ENSMUST00000156166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_77698813_AGGA/- chr7:77698813-77698816 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_77782102_CACA/-/CA chr7:77782102-77782105 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_77782102_CACA/-/CA chr7:77782102-77782105 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_78187160_ACAC/- chr7:78187160-78187163 - ENSMUSG00000059146.12 ENSMUST00000039431.13 Transcript 3_prime_UTR_variant 8499-8502 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78187160_ACAC/- chr7:78187160-78187163 - ENSMUSG00000059146.12 ENSMUST00000205354.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000039431.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000039438.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000155795.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000193002.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000195262.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000205700.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000206167.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000059146.12 ENSMUST00000206268.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_78562693_ACACAC/- chr7:78562693-78562698 - ENSMUSG00000108390.1 ENSMUST00000206774.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79790094_-/T chr7:79790093-79790094 T ENSMUSG00000030544.5 ENSMUST00000032760.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2147;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79790094_-/T chr7:79790093-79790094 T ENSMUSG00000039099.7 ENSMUST00000035622.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4143;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79790094_-/T chr7:79790093-79790094 T ENSMUSG00000108506.1 ENSMUST00000206719.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=193;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 - ENSMUSG00000039062.15 ENSMUST00000049004.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 TTTTTT ENSMUSG00000039062.15 ENSMUST00000049004.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 - ENSMUSG00000039062.15 ENSMUST00000107392.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 TTTTTT ENSMUSG00000039062.15 ENSMUST00000107392.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 - ENSMUSG00000039062.15 ENSMUST00000149164.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2200;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 TTTTTT ENSMUSG00000039062.15 ENSMUST00000149164.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2200;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 - ENSMUSG00000039062.15 ENSMUST00000205502.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 TTTTTT ENSMUSG00000039062.15 ENSMUST00000205502.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 - ENSMUSG00000039062.15 ENSMUST00000206235.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1642;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79840410_TTTTT/-/TTTTTT chr7:79840410-79840414 TTTTTT ENSMUSG00000039062.15 ENSMUST00000206235.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1642;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79870737_C/T chr7:79870737 T ENSMUSG00000063801.7 ENSMUST00000075657.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4588;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79930699_-/GATA chr7:79930698-79930699 GATA ENSMUSG00000039043.5 ENSMUST00000048731.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_79948750_A/T chr7:79948750 T ENSMUSG00000077059.1 ENSMUST00000103871.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=437;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_80552373_GTGT/- chr7:80552373-80552376 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_80978261_-/AATAAT chr7:80978260-80978261 AATAAT ENSMUSG00000109008.2 ENSMUST00000207451.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2861;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_80978261_-/AATAAT chr7:80978260-80978261 AATAAT ENSMUSG00000109367.1 ENSMUST00000209023.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1632;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_80978261_-/AATAAT chr7:80978260-80978261 AATAAT ENSMUSG00000109008.2 ENSMUST00000209433.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_81904027_AA/-/AAA chr7:81904027-81904028 - ENSMUSG00000025104.13 ENSMUST00000026094.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_81904027_AA/-/AAA chr7:81904027-81904028 AAA ENSMUSG00000025104.13 ENSMUST00000026094.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_81904027_AA/-/AAA chr7:81904027-81904028 - ENSMUSG00000025104.13 ENSMUST00000107305.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_81904027_AA/-/AAA chr7:81904027-81904028 AAA ENSMUSG00000025104.13 ENSMUST00000107305.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_81904027_AA/-/AAA chr7:81904027-81904028 - ENSMUSG00000025104.13 ENSMUST00000149288.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_81904027_AA/-/AAA chr7:81904027-81904028 AAA ENSMUSG00000025104.13 ENSMUST00000149288.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82253488_TGCCTGTGTGACCTGCTCCTCTGTGTAACCTGCTCCTCTGTGTGCCCTGTCCTTTGGGACCTGCCCACCTGTGTGACCTGCCACCCTGTTTGCCCTGTC/- chr7:82253488-82253586 - ENSMUSG00000030638.13 ENSMUST00000032874.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82253488_TGCCTGTGTGACCTGCTCCTCTGTGTAACCTGCTCCTCTGTGTGCCCTGTCCTTTGGGACCTGCCCACCTGTGTGACCTGCCACCCTGTTTGCCCTGTC/- chr7:82253488-82253586 - ENSMUSG00000030638.13 ENSMUST00000177883.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82253488_TGCCTGTGTGACCTGCTCCTCTGTGTAACCTGCTCCTCTGTGTGCCCTGTCCTTTGGGACCTGCCCACCTGTGTGACCTGCCACCCTGTTTGCCCTGTC/- chr7:82253488-82253586 - ENSMUSG00000030638.13 ENSMUST00000177895.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82253488_TGCCTGTGTGACCTGCTCCTCTGTGTAACCTGCTCCTCTGTGTGCCCTGTCCTTTGGGACCTGCCCACCTGTGTGACCTGCCACCCTGTTTGCCCTGTC/- chr7:82253488-82253586 - ENSMUSG00000030638.13 ENSMUST00000179318.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82253488_TGCCTGTGTGACCTGCTCCTCTGTGTAACCTGCTCCTCTGTGTGCCCTGTCCTTTGGGACCTGCCCACCTGTGTGACCTGCCACCCTGTTTGCCCTGTC/- chr7:82253488-82253586 - ENSMUSG00000030638.13 ENSMUST00000179800.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82253488_TGCCTGTGTGACCTGCTCCTCTGTGTAACCTGCTCCTCTGTGTGCCCTGTCCTTTGGGACCTGCCCACCTGTGTGACCTGCCACCCTGTTTGCCCTGTC/- chr7:82253488-82253586 - ENSMUSG00000030638.13 ENSMUST00000180183.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82253488_TGCCTGTGTGACCTGCTCCTCTGTGTAACCTGCTCCTCTGTGTGCCCTGTCCTTTGGGACCTGCCCACCTGTGTGACCTGCCACCCTGTTTGCCCTGTC/- chr7:82253488-82253586 - ENSMUSG00000030638.13 ENSMUST00000180243.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82395104_AA/- chr7:82395104-82395105 - ENSMUSG00000070469.12 ENSMUST00000173287.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_82395104_AA/- chr7:82395104-82395105 - ENSMUSG00000070469.12 ENSMUST00000173828.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83492271_AA/- chr7:83492271-83492272 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_83725117_TGTG/-/TG chr7:83725117-83725120 - ENSMUSG00000001741.12 ENSMUST00000001792.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83725117_TGTG/-/TG chr7:83725117-83725120 TG ENSMUSG00000001741.12 ENSMUST00000001792.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83725117_TGTG/-/TG chr7:83725117-83725120 - ENSMUSG00000001741.12 ENSMUST00000131916.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83725117_TGTG/-/TG chr7:83725117-83725120 TG ENSMUSG00000001741.12 ENSMUST00000131916.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83725117_TGTG/-/TG chr7:83725117-83725120 - ENSMUSG00000001741.12 ENSMUST00000153560.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83725117_TGTG/-/TG chr7:83725117-83725120 TG ENSMUSG00000001741.12 ENSMUST00000153560.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83725117_TGTG/-/TG chr7:83725117-83725120 - ENSMUSG00000001741.12 ENSMUST00000156553.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83725117_TGTG/-/TG chr7:83725117-83725120 TG ENSMUSG00000001741.12 ENSMUST00000156553.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83779591_AGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGG/- chr7:83779591-83779638 - ENSMUSG00000011154.17 ENSMUST00000011298.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83779591_AGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGG/- chr7:83779591-83779638 - ENSMUSG00000011154.17 ENSMUST00000119134.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83779591_AGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGG/- chr7:83779591-83779638 - ENSMUSG00000011154.17 ENSMUST00000149671.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=622;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_83779591_AGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGG/- chr7:83779591-83779638 - ENSMUSG00000011154.17 ENSMUST00000208785.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84475225_G/T chr7:84475225 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000069537.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000178385.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000207865.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000207975.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000208519.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000208782.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000209117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_84640980_T/A chr7:84640980 A ENSMUSG00000030629.15 ENSMUST00000209165.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_85523281_A/G chr7:85523281 G ENSMUSG00000092467.1 ENSMUST00000173327.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3864;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_85562529_AAAA/- chr7:85562529-85562532 - ENSMUSG00000090806.2 ENSMUST00000168230.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_85562529_AAAA/- chr7:85562529-85562532 - ENSMUSG00000091205.3 ENSMUST00000208545.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=555;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_85562529_AAAA/- chr7:85562529-85562532 - ENSMUSG00000090806.2 ENSMUST00000233631.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_85837215_AAAAAAAAAAAAAA/- chr7:85837215-85837228 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_86118019_T/-/TT chr7:86118019 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_86118019_T/-/TT chr7:86118019 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_86324674_A/T chr7:86324674 T ENSMUSG00000054498.6 ENSMUST00000044256.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2624;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_86324674_A/T chr7:86324674 T ENSMUSG00000054498.6 ENSMUST00000214977.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_86324674_A/T chr7:86324674 T ENSMUSG00000054498.6 ENSMUST00000215841.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87792171_AGAG/- chr7:87792171-87792174 - ENSMUSG00000049583.15 ENSMUST00000107263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87792171_AGAG/- chr7:87792171-87792174 - ENSMUSG00000049583.15 ENSMUST00000125009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87792171_AGAG/- chr7:87792171-87792174 - ENSMUSG00000049583.15 ENSMUST00000138732.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87792171_AGAG/- chr7:87792171-87792174 - ENSMUSG00000049583.15 ENSMUST00000155358.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87792171_AGAG/- chr7:87792171-87792174 - ENSMUSG00000049583.15 ENSMUST00000208791.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87874200_CACA/-/CA chr7:87874200-87874203 - ENSMUSG00000049583.15 ENSMUST00000107263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87874200_CACA/-/CA chr7:87874200-87874203 CA ENSMUSG00000049583.15 ENSMUST00000107263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87874200_CACA/-/CA chr7:87874200-87874203 - ENSMUSG00000049583.15 ENSMUST00000125009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87874200_CACA/-/CA chr7:87874200-87874203 CA ENSMUSG00000049583.15 ENSMUST00000125009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87874200_CACA/-/CA chr7:87874200-87874203 - ENSMUSG00000049583.15 ENSMUST00000155358.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_87874200_CACA/-/CA chr7:87874200-87874203 CA ENSMUSG00000049583.15 ENSMUST00000155358.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_88001178_G/A chr7:88001178 A ENSMUSG00000049583.15 ENSMUST00000107263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_88001178_G/A chr7:88001178 A ENSMUSG00000049583.15 ENSMUST00000125009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_88001178_G/A chr7:88001178 A ENSMUSG00000049583.15 ENSMUST00000155358.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_88001193_G/A chr7:88001193 A ENSMUSG00000049583.15 ENSMUST00000107263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_88001193_G/A chr7:88001193 A ENSMUSG00000049583.15 ENSMUST00000125009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_88001193_G/A chr7:88001193 A ENSMUSG00000049583.15 ENSMUST00000155358.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_88411446_C/T chr7:88411446 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_88411649_C/T chr7:88411649 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_88811754_TATA/- chr7:88811754-88811757 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_88999636_C/T chr7:88999636 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_88999640_C/T chr7:88999640 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_89426254_TT/-/T chr7:89426254-89426255 - ENSMUSG00000109311.1 ENSMUST00000207391.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=84;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_89426254_TT/-/T chr7:89426254-89426255 T ENSMUSG00000109311.1 ENSMUST00000207391.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=84;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_89426254_TT/-/T chr7:89426254-89426255 - ENSMUSG00000109311.1 ENSMUST00000209026.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=51;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_89426254_TT/-/T chr7:89426254-89426255 T ENSMUSG00000109311.1 ENSMUST00000209026.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=51;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_89595251_G/C chr7:89595251 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000098310.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000107210.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000107211.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000189194.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4066;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000190365.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000190731.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000190837.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000207928.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000208486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000208580.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000208809.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90394152_T/- chr7:90394152 - ENSMUSG00000030616.15 ENSMUST00000209188.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90505087_CC/- chr7:90505087-90505088 - ENSMUSG00000052572.17 ENSMUST00000208919.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=160;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90505087_CC/- chr7:90505087-90505088 - ENSMUSG00000052572.17 ENSMUST00000209170.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90505087_CC/- chr7:90505087-90505088 - ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90505134_A/T chr7:90505134 T ENSMUSG00000052572.17 ENSMUST00000208919.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=207;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90505134_A/T chr7:90505134 T ENSMUSG00000052572.17 ENSMUST00000209170.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90505134_A/T chr7:90505134 T ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90521985_CACA/- chr7:90521985-90521988 - ENSMUSG00000052572.17 ENSMUST00000209170.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90521985_CACA/- chr7:90521985-90521988 - ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_90545938_T/C chr7:90545938 C ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91413316_AAAAA/- chr7:91413316-91413320 - ENSMUSG00000052572.17 ENSMUST00000074273.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91413316_AAAAA/- chr7:91413316-91413320 - ENSMUSG00000052572.17 ENSMUST00000107196.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91413316_AAAAA/- chr7:91413316-91413320 - ENSMUSG00000052572.17 ENSMUST00000146563.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91413316_AAAAA/- chr7:91413316-91413320 - ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91456011_-/TATT chr7:91456010-91456011 TATT ENSMUSG00000052572.17 ENSMUST00000074273.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91456011_-/TATT chr7:91456010-91456011 TATT ENSMUSG00000052572.17 ENSMUST00000107196.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91456011_-/TATT chr7:91456010-91456011 TATT ENSMUSG00000052572.17 ENSMUST00000146563.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_91456011_-/TATT chr7:91456010-91456011 TATT ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000074273.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000074273.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000098308.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000098308.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000107193.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000107193.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000107196.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000107196.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000135581.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000135581.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000138389.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000138389.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000207798.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000207798.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000208377.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000208377.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 - ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92393383_TTT/-/TTTT chr7:92393383-92393385 TTTT ENSMUSG00000052572.17 ENSMUST00000231777.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 - ENSMUSG00000041328.16 ENSMUST00000119954.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 TA ENSMUSG00000041328.16 ENSMUST00000119954.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 - ENSMUSG00000041328.16 ENSMUST00000148539.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3309;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 TA ENSMUSG00000041328.16 ENSMUST00000148539.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3309;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 - ENSMUSG00000041328.16 ENSMUST00000151177.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 TA ENSMUSG00000041328.16 ENSMUST00000151177.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 - ENSMUSG00000098066.2 ENSMUST00000182265.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4076;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92651518_TATA/-/TA chr7:92651518-92651521 TA ENSMUSG00000098066.2 ENSMUST00000182265.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4076;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92805191_CTCT/- chr7:92805191-92805194 - ENSMUSG00000030643.14 ENSMUST00000032879.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92805191_CTCT/- chr7:92805191-92805194 - ENSMUSG00000030643.14 ENSMUST00000208470.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_92805191_CTCT/- chr7:92805191-92805194 - ENSMUSG00000030643.14 ENSMUST00000208945.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_93130963_G/T chr7:93130963 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_93288635_ACACAC/- chr7:93288635-93288640 - ENSMUSG00000109175.1 ENSMUST00000208462.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2060;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_94991249_ATAT/-/ATATAT chr7:94991249-94991252 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_94991249_ATAT/-/ATATAT chr7:94991249-94991252 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_95600802_AGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGA/- chr7:95600802-95600841 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_96053305_TGTG/-/TG chr7:96053305-96053308 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_96053305_TGTG/-/TG chr7:96053305-96053308 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_96243222_C/T chr7:96243222 T ENSMUSG00000048078.16 ENSMUST00000107162.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96243222_C/T chr7:96243222 T ENSMUSG00000048078.16 ENSMUST00000107165.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96243222_C/T chr7:96243222 T ENSMUSG00000048078.16 ENSMUST00000107166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96243222_C/T chr7:96243222 T ENSMUSG00000048078.16 ENSMUST00000129445.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96243222_C/T chr7:96243222 T ENSMUSG00000048078.16 ENSMUST00000133770.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96243222_C/T chr7:96243222 T ENSMUSG00000048078.16 ENSMUST00000138760.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96243222_C/T chr7:96243222 T ENSMUSG00000048078.16 ENSMUST00000144263.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96295915_TTT/- chr7:96295915-96295917 - ENSMUSG00000048078.16 ENSMUST00000107162.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96295915_TTT/- chr7:96295915-96295917 - ENSMUSG00000048078.16 ENSMUST00000107165.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96295915_TTT/- chr7:96295915-96295917 - ENSMUSG00000048078.16 ENSMUST00000107166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96295915_TTT/- chr7:96295915-96295917 - ENSMUSG00000048078.16 ENSMUST00000129445.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96295915_TTT/- chr7:96295915-96295917 - ENSMUSG00000048078.16 ENSMUST00000133770.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96295915_TTT/- chr7:96295915-96295917 - ENSMUSG00000048078.16 ENSMUST00000138760.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96295915_TTT/- chr7:96295915-96295917 - ENSMUSG00000048078.16 ENSMUST00000144263.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96771776_AAGA/- chr7:96771776-96771779 - ENSMUSG00000048078.16 ENSMUST00000107162.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96771776_AAGA/- chr7:96771776-96771779 - ENSMUSG00000048078.16 ENSMUST00000107165.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_96771776_AAGA/- chr7:96771776-96771779 - ENSMUSG00000048078.16 ENSMUST00000107166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_97080928_A/- chr7:97080928 - ENSMUSG00000004508.6 ENSMUST00000004622.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=658;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_97080928_A/- chr7:97080928 - ENSMUSG00000004508.6 ENSMUST00000206791.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=848;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_97738862_-/ATAC chr7:97738861-97738862 ATAC ENSMUSG00000042797.9 ENSMUST00000084986.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=923;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_97738862_-/ATAC chr7:97738861-97738862 ATAC ENSMUSG00000042797.9 ENSMUST00000206389.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=572;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 - ENSMUSG00000030761.15 ENSMUST00000084979.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 CA ENSMUSG00000030761.15 ENSMUST00000084979.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 - ENSMUSG00000030761.15 ENSMUST00000107122.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 CA ENSMUSG00000030761.15 ENSMUST00000107122.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 - ENSMUSG00000030761.15 ENSMUST00000107127.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 CA ENSMUSG00000030761.15 ENSMUST00000107127.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 - ENSMUSG00000030761.15 ENSMUST00000107128.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 CA ENSMUSG00000030761.15 ENSMUST00000107128.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 - ENSMUSG00000030761.15 ENSMUST00000156992.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4383;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 CA ENSMUSG00000030761.15 ENSMUST00000156992.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4383;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 - ENSMUSG00000030761.15 ENSMUST00000205746.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98073760_CACA/-/CA chr7:98073760-98073763 CA ENSMUSG00000030761.15 ENSMUST00000205746.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000084979.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2723;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000107122.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2723;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000107127.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000107128.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000131632.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000138627.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000153657.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98111972_-/TAAA chr7:98111971-98111972 TAAA ENSMUSG00000030761.15 ENSMUST00000205746.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4824;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98336399_TCTC/- chr7:98336399-98336402 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_98369955_TTTT/- chr7:98369955-98369958 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_98722799_CTCT/- chr7:98722799-98722802 - ENSMUSG00000030753.15 ENSMUST00000033009.15 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4737;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98722799_CTCT/- chr7:98722799-98722802 - ENSMUSG00000109149.1 ENSMUST00000208543.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98895216_G/C chr7:98895216 C ENSMUSG00000035354.9 ENSMUST00000037968.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98895216_G/C chr7:98895216 C ENSMUSG00000109282.1 ENSMUST00000207592.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=714;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98895216_G/C chr7:98895216 C ENSMUSG00000035354.9 ENSMUST00000207919.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_98895216_G/C chr7:98895216 C ENSMUSG00000035354.9 ENSMUST00000209123.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000047248.20 ENSMUST00000051777.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000047248.20 ENSMUST00000051777.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000047248.20 ENSMUST00000098259.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000047248.20 ENSMUST00000098259.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000047248.20 ENSMUST00000120196.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000047248.20 ENSMUST00000120196.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000047248.20 ENSMUST00000151573.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000047248.20 ENSMUST00000151573.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000099137.1 ENSMUST00000183512.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000099137.1 ENSMUST00000183512.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000099137.1 ENSMUST00000184420.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000099137.1 ENSMUST00000184420.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000099137.1 ENSMUST00000184875.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000099137.1 ENSMUST00000184875.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 - ENSMUSG00000047248.20 ENSMUST00000208018.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_100466631_CACA/-/CA chr7:100466631-100466634 CA ENSMUSG00000047248.20 ENSMUST00000208018.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101201227_GTGT/- chr7:101201227-101201230 - ENSMUSG00000030691.15 ENSMUST00000032931.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101201227_GTGT/- chr7:101201227-101201230 - ENSMUSG00000030691.15 ENSMUST00000098250.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101201227_GTGT/- chr7:101201227-101201230 - ENSMUSG00000030691.15 ENSMUST00000137196.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101201227_GTGT/- chr7:101201227-101201230 - ENSMUSG00000030691.15 ENSMUST00000145802.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=259;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101201227_GTGT/- chr7:101201227-101201230 - ENSMUSG00000030691.15 ENSMUST00000208439.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4324;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101579213_GAAGAA/- chr7:101579213-101579218 - ENSMUSG00000030651.5 ENSMUST00000063920.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101579213_GAAGAA/- chr7:101579213-101579218 - ENSMUSG00000067121.2 ENSMUST00000086958.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4892;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101579213_GAAGAA/- chr7:101579213-101579218 - ENSMUSG00000030651.5 ENSMUST00000209526.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000007946.11 ENSMUST00000008090.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=387;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000032737.13 ENSMUST00000035836.13 Transcript 3_prime_UTR_variant 4513-4514 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000032737.13 ENSMUST00000165052.7 Transcript 3_prime_UTR_variant 4255-4256 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000032737.13 ENSMUST00000185929.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=830;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000032737.13 ENSMUST00000186316.1 Transcript 3_prime_UTR_variant 2098-2099 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000007946.11 ENSMUST00000209878.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1754;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000032737.13 ENSMUST00000210116.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4331;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101823113_CC/- chr7:101823113-101823114 - ENSMUSG00000032737.13 ENSMUST00000211436.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=207;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 - ENSMUSG00000066306.13 ENSMUST00000209639.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 TA ENSMUSG00000066306.13 ENSMUST00000209639.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 TATATA ENSMUSG00000066306.13 ENSMUST00000209639.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 - ENSMUSG00000066306.13 ENSMUST00000210679.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 TA ENSMUSG00000066306.13 ENSMUST00000210679.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 TATATA ENSMUSG00000066306.13 ENSMUST00000210679.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 - ENSMUSG00000110150.1 ENSMUST00000211386.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 TA ENSMUSG00000110150.1 ENSMUST00000211386.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_101948232_TATA/-/TA/TATATA chr7:101948232-101948235 TATATA ENSMUSG00000110150.1 ENSMUST00000211386.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 A ENSMUSG00000063550.8 ENSMUST00000070165.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 TAA ENSMUSG00000063550.8 ENSMUST00000070165.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 A ENSMUSG00000063550.8 ENSMUST00000209242.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=591;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 TAA ENSMUSG00000063550.8 ENSMUST00000209242.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=591;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 A ENSMUSG00000063550.8 ENSMUST00000210682.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 TAA ENSMUSG00000063550.8 ENSMUST00000210682.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 A ENSMUSG00000063550.8 ENSMUST00000211005.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 TAA ENSMUSG00000063550.8 ENSMUST00000211005.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 A ENSMUSG00000063550.8 ENSMUST00000211022.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 TAA ENSMUSG00000063550.8 ENSMUST00000211022.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 A ENSMUSG00000063550.8 ENSMUST00000211235.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 TAA ENSMUSG00000063550.8 ENSMUST00000211235.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 A ENSMUSG00000063550.8 ENSMUST00000211764.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102177691_T/A/TAA chr7:102177691 TAA ENSMUSG00000063550.8 ENSMUST00000211764.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000033292.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000119816.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000120119.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000120879.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000126914.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000127804.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000129340.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000133311.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000134621.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2427;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000138479.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000138753.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000140058.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000142873.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000143541.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000143759.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000145352.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000150891.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000153020.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000030990.18 ENSMUST00000156529.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102233476_A/G chr7:102233476 G ENSMUSG00000111339.1 ENSMUST00000214560.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2378;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102339751_TT/- chr7:102339751-102339752 - ENSMUSG00000030987.5 ENSMUST00000033289.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102339751_TT/- chr7:102339751-102339752 - ENSMUSG00000030987.5 ENSMUST00000209255.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102339751_TT/- chr7:102339751-102339752 - ENSMUSG00000030987.5 ENSMUST00000210266.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102339751_TT/- chr7:102339751-102339752 - ENSMUSG00000030987.5 ENSMUST00000211457.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102935428_G/- chr7:102935428 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_102982189_-/TAA chr7:102982188-102982189 TAA ENSMUSG00000045792.2 ENSMUST00000056235.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2032;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_102982189_-/TAA chr7:102982188-102982189 TAA ENSMUSG00000045792.2 ENSMUST00000215606.1 Transcript 3_prime_UTR_variant 3084-3085 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103015107_T/C chr7:103015107 C ENSMUSG00000110143.1 ENSMUST00000210528.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=617;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103101639_T/C chr7:103101639 C ENSMUSG00000078080.6 ENSMUST00000104881.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2890;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103105360_T/G chr7:103105360 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_103282874_A/T chr7:103282874 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_103605595_G/C chr7:103605595 C ENSMUSG00000045132.3 ENSMUST00000052152.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103605595_G/C chr7:103605595 C ENSMUSG00000073944.6 ENSMUST00000098196.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=883;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103605595_G/C chr7:103605595 C ENSMUSG00000073944.6 ENSMUST00000215732.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=736;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103605595_G/C chr7:103605595 C ENSMUSG00000045132.3 ENSMUST00000215752.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1279;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103605595_G/C chr7:103605595 C ENSMUSG00000045132.3 ENSMUST00000217603.2 Transcript 3_prime_UTR_variant,NMD_transcript_variant 4859 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103658660_ATAT/-/ATATAT chr7:103658660-103658663 - ENSMUSG00000099687.3 ENSMUST00000068531.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1581;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103658660_ATAT/-/ATATAT chr7:103658660-103658663 ATATAT ENSMUSG00000099687.3 ENSMUST00000068531.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1581;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103658660_ATAT/-/ATATAT chr7:103658660-103658663 - ENSMUSG00000099687.3 ENSMUST00000213840.1 Transcript 3_prime_UTR_variant 3014-3017 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103658660_ATAT/-/ATATAT chr7:103658660-103658663 ATATAT ENSMUSG00000099687.3 ENSMUST00000213840.1 Transcript 3_prime_UTR_variant 3014-3017 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103755165_G/A chr7:103755165 A ENSMUSG00000050281.4 ENSMUST00000106880.2 Transcript missense_variant 513 419 140 P/L cCg/cTg - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_103755165_G/A chr7:103755165 A ENSMUSG00000050281.4 ENSMUST00000217072.1 Transcript non_coding_transcript_exon_variant 421 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_104625830_A/T chr7:104625830 T ENSMUSG00000073923.4 ENSMUST00000213297.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_104625830_A/T chr7:104625830 T ENSMUSG00000073923.4 ENSMUST00000215454.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_104625830_A/T chr7:104625830 T ENSMUSG00000073924.5 ENSMUST00000215575.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4227;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_104781956_G/A chr7:104781956 A ENSMUSG00000043073.10 ENSMUST00000053464.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4486;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_104781956_G/A chr7:104781956 A ENSMUSG00000043073.10 ENSMUST00000211384.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4486;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105016519_A/T chr7:105016519 T ENSMUSG00000096773.4 ENSMUST00000210113.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4851;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105016519_A/T chr7:105016519 T ENSMUSG00000096773.4 ENSMUST00000214318.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4851;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105016519_A/T chr7:105016519 T ENSMUSG00000096773.4 ENSMUST00000215899.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4851;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105139630_GTGT/-/GT chr7:105139630-105139633 - ENSMUSG00000044120.5 ENSMUST00000061284.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3717;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105139630_GTGT/-/GT chr7:105139630-105139633 GT ENSMUSG00000044120.5 ENSMUST00000061284.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3717;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105139630_GTGT/-/GT chr7:105139630-105139633 - ENSMUSG00000044120.5 ENSMUST00000209879.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1206;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105139630_GTGT/-/GT chr7:105139630-105139633 GT ENSMUSG00000044120.5 ENSMUST00000209879.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1206;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105159541_GTGT/- chr7:105159541-105159544 - ENSMUSG00000047225.8 ENSMUST00000060893.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1861;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105159541_GTGT/- chr7:105159541-105159544 - ENSMUSG00000047225.8 ENSMUST00000215552.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105159541_GTGT/- chr7:105159541-105159544 - ENSMUSG00000047225.8 ENSMUST00000215744.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_105159541_GTGT/- chr7:105159541-105159544 - ENSMUSG00000047225.8 ENSMUST00000217136.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_106574369_T/- chr7:106574369 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_106754156_G/A chr7:106754156 A ENSMUSG00000059087.4 ENSMUST00000074981.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=770;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_106754156_G/A chr7:106754156 A ENSMUSG00000059087.4 ENSMUST00000214306.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_106754156_G/A chr7:106754156 A ENSMUSG00000059087.4 ENSMUST00000215892.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_106754156_G/A chr7:106754156 A ENSMUSG00000059087.4 ENSMUST00000216255.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107819081_-/ATCT chr7:107819080-107819081 ATCT ENSMUSG00000095910.2 ENSMUST00000075704.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3442;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107819081_-/ATCT chr7:107819080-107819081 ATCT ENSMUSG00000066242.3 ENSMUST00000084756.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3574;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107819081_-/ATCT chr7:107819080-107819081 ATCT ENSMUSG00000109192.2 ENSMUST00000207203.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1996;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107819081_-/ATCT chr7:107819080-107819081 ATCT ENSMUSG00000066242.3 ENSMUST00000208563.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2744;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107819081_-/ATCT chr7:107819080-107819081 ATCT ENSMUSG00000095910.2 ENSMUST00000213252.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107819081_-/ATCT chr7:107819080-107819081 ATCT ENSMUSG00000066242.3 ENSMUST00000214253.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2744;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107819081_-/ATCT chr7:107819080-107819081 ATCT ENSMUSG00000095910.2 ENSMUST00000216431.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107950877_-/TTCT chr7:107950876-107950877 TTCT ENSMUSG00000094197.1 ENSMUST00000054434.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3766;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_107950877_-/TTCT chr7:107950876-107950877 TTCT ENSMUSG00000108892.1 ENSMUST00000207265.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=469;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_108362384_TT/-/TTT chr7:108362384-108362385 - ENSMUSG00000109631.1 ENSMUST00000209743.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2950;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_108362384_TT/-/TTT chr7:108362384-108362385 TTT ENSMUSG00000109631.1 ENSMUST00000209743.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2950;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_108995821_TTT/- chr7:108995821-108995823 - ENSMUSG00000031028.14 ENSMUST00000207583.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 - ENSMUSG00000046364.14 ENSMUST00000053298.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3744;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 AC ENSMUSG00000046364.14 ENSMUST00000053298.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3744;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 - ENSMUSG00000065016.1 ENSMUST00000083082.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4651;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 AC ENSMUSG00000065016.1 ENSMUST00000083082.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4651;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 - ENSMUSG00000046364.14 ENSMUST00000132877.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3727;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 AC ENSMUSG00000046364.14 ENSMUST00000132877.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3727;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 - ENSMUSG00000046364.14 ENSMUST00000143107.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3678;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 AC ENSMUSG00000046364.14 ENSMUST00000143107.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3678;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 - ENSMUSG00000046364.14 ENSMUST00000149143.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3730;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 AC ENSMUSG00000046364.14 ENSMUST00000149143.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3730;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 - ENSMUSG00000046364.14 ENSMUST00000156921.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3751;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 AC ENSMUSG00000046364.14 ENSMUST00000156921.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3751;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 - ENSMUSG00000046364.14 ENSMUST00000174303.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3801;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109515466_ACAC/-/AC chr7:109515466-109515469 AC ENSMUSG00000046364.14 ENSMUST00000174303.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3801;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109543937_A/T chr7:109543937 T ENSMUSG00000031024.13 ENSMUST00000077909.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109543937_A/T chr7:109543937 T ENSMUSG00000031024.13 ENSMUST00000079282.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109543937_A/T chr7:109543937 T ENSMUSG00000031024.13 ENSMUST00000084738.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109543937_A/T chr7:109543937 T ENSMUSG00000031024.13 ENSMUST00000168005.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109543937_A/T chr7:109543937 T ENSMUSG00000031024.13 ENSMUST00000207664.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3504;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109543937_A/T chr7:109543937 T ENSMUSG00000031024.13 ENSMUST00000208557.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109907127_C/G chr7:109907127 G ENSMUSG00000035901.14 ENSMUST00000080437.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109907127_C/G chr7:109907127 G ENSMUSG00000035901.14 ENSMUST00000106722.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109907127_C/G chr7:109907127 G ENSMUSG00000035901.14 ENSMUST00000154002.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=278;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000094097.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4401;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000118429.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3923;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000119929.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000124821.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4577;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000135565.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4603;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000151587.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000154831.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4690;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000089306.1 ENSMUST00000158681.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2721;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109990852_T/C chr7:109990852 C ENSMUSG00000047554.14 ENSMUST00000207300.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4565;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109998968_G/A chr7:109998968 A ENSMUSG00000065389.1 ENSMUST00000083455.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4610;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109998968_G/A chr7:109998968 A ENSMUSG00000101585.6 ENSMUST00000185931.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109998968_G/A chr7:109998968 A ENSMUSG00000101585.6 ENSMUST00000188662.1 Transcript non_coding_transcript_exon_variant 266 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109998968_G/A chr7:109998968 A ENSMUSG00000101585.6 ENSMUST00000188824.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2172;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_109998968_G/A chr7:109998968 A ENSMUSG00000101585.6 ENSMUST00000191157.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110134262_-/TTTTTTTTTTTTTTTTT chr7:110134261-110134262 TTTTTTTTTTTTTTTTT ENSMUSG00000031016.9 ENSMUST00000033326.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110134262_-/TTTTTTTTTTTTTTTTT chr7:110134261-110134262 TTTTTTTTTTTTTTTTT ENSMUSG00000101585.6 ENSMUST00000185931.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000033058.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000033058.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000164759.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000164759.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000165449.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000165449.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000166020.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000166020.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000167652.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000167652.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000167880.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000167880.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000171218.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000171218.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 A ENSMUSG00000038371.15 ENSMUST00000171378.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110602041_AC/A/CC chr7:110602041-110602042 CC ENSMUSG00000038371.15 ENSMUST00000171378.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110735257_-/AA chr7:110735256-110735257 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_110890556_TT/- chr7:110890556-110890557 - ENSMUSG00000005611.15 ENSMUST00000005751.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110890556_TT/- chr7:110890556-110890557 - ENSMUSG00000005611.15 ENSMUST00000125758.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_110890556_TT/- chr7:110890556-110890557 - ENSMUSG00000005611.15 ENSMUST00000127935.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_111238985_-/TCTTTTC chr7:111238984-111238985 TCTTTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_111296488_-/TTCC chr7:111296487-111296488 TTCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_111526515_TGTGTG/- chr7:111526515-111526520 - ENSMUSG00000038296.14 ENSMUST00000049430.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_111526515_TGTGTG/- chr7:111526515-111526520 - ENSMUSG00000038296.14 ENSMUST00000106663.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112052569_TT/- chr7:112052569-112052570 - ENSMUSG00000059263.9 ENSMUST00000106653.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112052569_TT/- chr7:112052569-112052570 - ENSMUSG00000059263.9 ENSMUST00000210309.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112052569_TT/- chr7:112052569-112052570 - ENSMUSG00000059263.9 ENSMUST00000210591.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112052569_TT/- chr7:112052569-112052570 - ENSMUSG00000059263.9 ENSMUST00000211791.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112052569_TT/- chr7:112052569-112052570 - ENSMUSG00000059263.9 ENSMUST00000215510.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112626622_CACA/- chr7:112626622-112626625 - ENSMUSG00000085945.3 ENSMUST00000146145.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000059768.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000069256.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3729;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000084705.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000106638.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000163593.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3732;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000164363.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000165036.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3828;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000167060.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3881;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000168328.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3891;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000168981.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3828;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000170352.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000171197.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3828;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000171373.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_112755655_-/TTTTTTTTTTTTT chr7:112755654-112755655 TTTTTTTTTTTTT ENSMUSG00000055320.17 ENSMUST00000172065.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113152114_ACAC/-/AC chr7:113152114-113152117 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_113152114_ACAC/-/AC chr7:113152114-113152117 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 - ENSMUSG00000055116.8 ENSMUST00000047321.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AG ENSMUSG00000055116.8 ENSMUST00000047321.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AGAGAG ENSMUSG00000055116.8 ENSMUST00000047321.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 - ENSMUSG00000055116.8 ENSMUST00000210074.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AG ENSMUSG00000055116.8 ENSMUST00000210074.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AGAGAG ENSMUSG00000055116.8 ENSMUST00000210074.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 - ENSMUSG00000055116.8 ENSMUST00000210238.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AG ENSMUSG00000055116.8 ENSMUST00000210238.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AGAGAG ENSMUSG00000055116.8 ENSMUST00000210238.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 - ENSMUSG00000055116.8 ENSMUST00000211770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AG ENSMUSG00000055116.8 ENSMUST00000211770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_113271066_AGAG/-/AG/AGAGAG chr7:113271066-113271069 AGAGAG ENSMUSG00000055116.8 ENSMUST00000211770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115429148_ACAC/- chr7:115429148-115429151 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000072804.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000106612.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000166207.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000166877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000169129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000205405.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000206034.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115478993_-/T chr7:115478992-115478993 T ENSMUSG00000051910.13 ENSMUST00000206369.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000072804.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000106612.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000166207.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000166877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000169129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000205405.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000205818.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000205980.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000206034.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000206123.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000206369.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115808792_GAGA/- chr7:115808792-115808795 - ENSMUSG00000051910.13 ENSMUST00000206573.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000072804.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000072804.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000106612.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000106612.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000166207.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000166207.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000166877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000166877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000169129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000169129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000205405.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000205405.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000205818.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000205818.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000205980.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000205980.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000206034.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000206034.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000206123.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000206123.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000206369.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000206369.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 - ENSMUSG00000051910.13 ENSMUST00000206573.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_115820594_TGTG/-/TG chr7:115820594-115820597 TG ENSMUSG00000051910.13 ENSMUST00000206573.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_116295820_A/T chr7:116295820 T ENSMUSG00000045659.18 ENSMUST00000181998.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_116295820_A/T chr7:116295820 T ENSMUSG00000045659.18 ENSMUST00000182487.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_116295820_A/T chr7:116295820 T ENSMUSG00000045659.18 ENSMUST00000182890.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_116295820_A/T chr7:116295820 T ENSMUSG00000045659.18 ENSMUST00000183057.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_116295820_A/T chr7:116295820 T ENSMUSG00000045659.18 ENSMUST00000216517.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_116796981_-/TCTA chr7:116796980-116796981 TCTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_116974379_ACAC/- chr7:116974379-116974382 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_118030317_A/- chr7:118030317 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_118734060_C/T chr7:118734060 T ENSMUSG00000033904.16 ENSMUST00000038650.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_118734060_C/T chr7:118734060 T ENSMUSG00000033904.16 ENSMUST00000106557.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_118734060_C/T chr7:118734060 T ENSMUSG00000033904.16 ENSMUST00000123178.7 Transcript 3_prime_UTR_variant 3992 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_118734060_C/T chr7:118734060 T ENSMUSG00000033904.16 ENSMUST00000140831.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1598;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_118734060_C/T chr7:118734060 T ENSMUSG00000033904.16 ENSMUST00000149056.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_118734060_C/T chr7:118734060 T ENSMUSG00000033904.16 ENSMUST00000208766.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119036050_T/C chr7:119036050 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 - ENSMUSG00000030945.17 ENSMUST00000084647.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 ACAC ENSMUSG00000030945.17 ENSMUST00000084647.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 - ENSMUSG00000030945.17 ENSMUST00000098084.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 ACAC ENSMUSG00000030945.17 ENSMUST00000098084.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 - ENSMUSG00000030945.17 ENSMUST00000130583.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 ACAC ENSMUSG00000030945.17 ENSMUST00000130583.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 - ENSMUSG00000030945.17 ENSMUST00000167935.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 ACAC ENSMUSG00000030945.17 ENSMUST00000167935.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 - ENSMUSG00000030945.17 ENSMUST00000209069.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_119564255_ACACAC/-/ACAC chr7:119564255-119564260 ACAC ENSMUSG00000030945.17 ENSMUST00000209069.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_120755004_-/AAAG chr7:120755003-120755004 AAAG ENSMUSG00000030889.14 ENSMUST00000033180.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_120755004_-/AAAG chr7:120755003-120755004 AAAG ENSMUSG00000030889.14 ENSMUST00000166668.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_120755004_-/AAAG chr7:120755003-120755004 AAAG ENSMUSG00000030889.14 ENSMUST00000167213.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_120755004_-/AAAG chr7:120755003-120755004 AAAG ENSMUSG00000030889.14 ENSMUST00000168600.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_121765568_-/GTTA chr7:121765567-121765568 GTTA ENSMUSG00000000216.8 ENSMUST00000000221.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_121966436_C/T chr7:121966436 T ENSMUSG00000034951.10 ENSMUST00000057576.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_121966436_C/T chr7:121966436 T ENSMUSG00000034951.10 ENSMUST00000148634.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_121966436_C/T chr7:121966436 T ENSMUSG00000034951.10 ENSMUST00000205438.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122193488_T/G chr7:122193488 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_122343198_CCCTCCCCTCCCCTCCCCTC/- chr7:122343198-122343217 - ENSMUSG00000052889.11 ENSMUST00000064921.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122343198_CCCTCCCCTCCCCTCCCCTC/- chr7:122343198-122343217 - ENSMUSG00000052889.11 ENSMUST00000064989.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122343198_CCCTCCCCTCCCCTCCCCTC/- chr7:122343198-122343217 - ENSMUSG00000052889.11 ENSMUST00000131167.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122343198_CCCTCCCCTCCCCTCCCCTC/- chr7:122343198-122343217 - ENSMUSG00000052889.11 ENSMUST00000143692.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122434384_TT/GA chr7:122434384-122434385 GA ENSMUSG00000052889.11 ENSMUST00000064921.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122434384_TT/GA chr7:122434384-122434385 GA ENSMUSG00000052889.11 ENSMUST00000064989.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122434384_TT/GA chr7:122434384-122434385 GA ENSMUSG00000052889.11 ENSMUST00000143692.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122434384_TT/GA chr7:122434384-122434385 GA ENSMUSG00000052889.11 ENSMUST00000149583.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122590743_GAGA/- chr7:122590743-122590746 - ENSMUSG00000052889.11 ENSMUST00000064921.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122590743_GAGA/- chr7:122590743-122590746 - ENSMUSG00000052889.11 ENSMUST00000064989.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122590743_GAGA/- chr7:122590743-122590746 - ENSMUSG00000052889.11 ENSMUST00000143692.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122590743_GAGA/- chr7:122590743-122590746 - ENSMUSG00000052889.11 ENSMUST00000205550.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3175;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122590743_GAGA/- chr7:122590743-122590746 - ENSMUSG00000108341.1 ENSMUST00000205565.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=189;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_122823925_A/- chr7:122823925 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_122891056_A/T chr7:122891056 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_123301766_CACA/-/CA chr7:123301766-123301769 - ENSMUSG00000030766.15 ENSMUST00000098060.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 CA ENSMUSG00000030766.15 ENSMUST00000098060.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 - ENSMUSG00000030766.15 ENSMUST00000106442.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 CA ENSMUSG00000030766.15 ENSMUST00000106442.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 - ENSMUSG00000030766.15 ENSMUST00000167309.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 CA ENSMUSG00000030766.15 ENSMUST00000167309.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 - ENSMUSG00000030766.15 ENSMUST00000205262.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 CA ENSMUSG00000030766.15 ENSMUST00000205262.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 - ENSMUSG00000030766.15 ENSMUST00000206117.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 CA ENSMUSG00000030766.15 ENSMUST00000206117.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 - ENSMUSG00000030766.15 ENSMUST00000206294.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 CA ENSMUSG00000030766.15 ENSMUST00000206294.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 - ENSMUSG00000030766.15 ENSMUST00000207010.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_123301766_CACA/-/CA chr7:123301766-123301769 CA ENSMUSG00000030766.15 ENSMUST00000207010.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_124546997_TT/- chr7:124546997-124546998 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_125525455_A/C chr7:125525455 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_125525458_T/C chr7:125525458 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_125541431_AGAG/- chr7:125541431-125541434 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_125634711_GAAGAA/- chr7:125634711-125634716 - ENSMUSG00000030745.9 ENSMUST00000033000.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1141;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_125634711_GAAGAA/- chr7:125634711-125634716 - ENSMUSG00000030745.9 ENSMUST00000206103.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1439;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_125634711_GAAGAA/- chr7:125634711-125634716 - ENSMUSG00000030745.9 ENSMUST00000206234.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3205;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_125634731_A/G chr7:125634731 G ENSMUSG00000030745.9 ENSMUST00000033000.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1161;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_125634731_A/G chr7:125634731 G ENSMUSG00000030745.9 ENSMUST00000206103.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1459;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_125634731_A/G chr7:125634731 G ENSMUSG00000030745.9 ENSMUST00000206234.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3225;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_126207855_A/T chr7:126207855 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000048896.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000098267.1 ENSMUST00000183486.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=741;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000105918.1 ENSMUST00000196180.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2332;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000205432.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000205651.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000205696.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000205803.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000205967.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=557;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000206394.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_127488510_A/- chr7:127488510 - ENSMUSG00000042423.9 ENSMUST00000206484.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_128027191_C/T chr7:128027191 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_128027199_C/T chr7:128027199 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_128517879_T/C chr7:128517879 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_129243004_TTTT/- chr7:129243004-129243007 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_129928874_GTGTGTGT/- chr7:129928874-129928881 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_131313084_AGAGAG/- chr7:131313084-131313089 - ENSMUSG00000040205.8 ENSMUST00000046611.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131313084_AGAGAG/- chr7:131313084-131313089 - ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 - ENSMUSG00000040177.10 ENSMUST00000059438.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 AAAAA ENSMUSG00000040177.10 ENSMUST00000059438.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 - ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 AAAAA ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 - ENSMUSG00000040177.10 ENSMUST00000207305.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3091;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 AAAAA ENSMUSG00000040177.10 ENSMUST00000207305.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3091;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 - ENSMUSG00000040177.10 ENSMUST00000207354.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3024;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 AAAAA ENSMUSG00000040177.10 ENSMUST00000207354.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3024;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 - ENSMUSG00000040177.10 ENSMUST00000208509.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2768;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 AAAAA ENSMUSG00000040177.10 ENSMUST00000208509.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2768;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 - ENSMUSG00000040177.10 ENSMUST00000208526.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2782;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131365478_AAAA/-/AAAAA chr7:131365478-131365481 AAAAA ENSMUSG00000040177.10 ENSMUST00000208526.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2782;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131610606_C/T chr7:131610606 T ENSMUSG00000062758.6 ENSMUST00000085365.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3582;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_131610606_C/T chr7:131610606 T ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132003774_G/C chr7:132003774 C ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 - ENSMUSG00000030862.13 ENSMUST00000033149.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 AC ENSMUSG00000030862.13 ENSMUST00000033149.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 - ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 AC ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 - ENSMUSG00000030862.13 ENSMUST00000127039.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 AC ENSMUSG00000030862.13 ENSMUST00000127039.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 - ENSMUSG00000030862.13 ENSMUST00000136188.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132101707_ACAC/-/AC chr7:132101707-132101710 AC ENSMUSG00000030862.13 ENSMUST00000136188.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132272134_AGGGAGGG/- chr7:132272134-132272141 - ENSMUSG00000030930.14 ENSMUST00000077472.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132272134_AGGGAGGG/- chr7:132272134-132272141 - ENSMUSG00000030930.14 ENSMUST00000080215.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132272134_AGGGAGGG/- chr7:132272134-132272141 - ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132272134_AGGGAGGG/- chr7:132272134-132272141 - ENSMUSG00000030930.14 ENSMUST00000132508.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132284052_T/C chr7:132284052 C ENSMUSG00000030930.14 ENSMUST00000077472.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132284052_T/C chr7:132284052 C ENSMUSG00000030930.14 ENSMUST00000080215.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132284052_T/C chr7:132284052 C ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132585393_CACA/-/CA chr7:132585393-132585396 - ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132585393_CACA/-/CA chr7:132585393-132585396 CA ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000065371.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000097998.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000097999.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000106165.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000106166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000106168.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000106169.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132770111_G/A chr7:132770111 A ENSMUSG00000030956.15 ENSMUST00000134946.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132826372_TGTG/- chr7:132826372-132826375 - ENSMUSG00000030960.16 ENSMUST00000033257.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1082;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132826372_TGTG/- chr7:132826372-132826375 - ENSMUSG00000030960.16 ENSMUST00000120425.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1234;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132826372_TGTG/- chr7:132826372-132826375 - ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132826372_TGTG/- chr7:132826372-132826375 - ENSMUSG00000030960.16 ENSMUST00000135932.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1406;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132826372_TGTG/- chr7:132826372-132826375 - ENSMUSG00000030960.16 ENSMUST00000141920.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4993;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132826372_TGTG/- chr7:132826372-132826375 - ENSMUSG00000030960.16 ENSMUST00000152410.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4985;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132897777_TTTTT/- chr7:132897777-132897781 - ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132897777_TTTTT/- chr7:132897777-132897781 - ENSMUSG00000097595.2 ENSMUST00000180905.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132897777_TTTTT/- chr7:132897777-132897781 - ENSMUSG00000097595.2 ENSMUST00000209767.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132909941_C/T chr7:132909941 T ENSMUSG00000030849.18 ENSMUST00000124096.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132909941_C/T chr7:132909941 T ENSMUSG00000097595.2 ENSMUST00000180905.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132909941_C/T chr7:132909941 T ENSMUSG00000109842.1 ENSMUST00000209561.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1148;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_132909941_C/T chr7:132909941 T ENSMUSG00000097595.2 ENSMUST00000209767.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_133233646_TGTG/-/TG chr7:133233646-133233649 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_133233646_TGTG/-/TG chr7:133233646-133233649 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_134591536_AAAAAAAAAAAAAAAAA/- chr7:134591536-134591552 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_134746382_C/T chr7:134746382 T ENSMUSG00000058325.6 ENSMUST00000084488.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_134746382_C/T chr7:134746382 T ENSMUSG00000058325.6 ENSMUST00000210464.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_134746382_C/T chr7:134746382 T ENSMUSG00000058325.6 ENSMUST00000210617.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_134746382_C/T chr7:134746382 T ENSMUSG00000058325.6 ENSMUST00000211570.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_134746382_C/T chr7:134746382 T ENSMUSG00000058325.6 ENSMUST00000211593.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_134795885_CTCT/- chr7:134795885-134795888 - ENSMUSG00000058325.6 ENSMUST00000084488.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_134795885_CTCT/- chr7:134795885-134795888 - ENSMUSG00000058325.6 ENSMUST00000210617.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_134795885_CTCT/- chr7:134795885-134795888 - ENSMUSG00000058325.6 ENSMUST00000211570.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_136153401_TGTG/-/TG chr7:136153401-136153404 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_136153401_TGTG/-/TG chr7:136153401-136153404 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_137053948_G/T chr7:137053948 T ENSMUSG00000054612.4 ENSMUST00000081510.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_137680763_TGTG/-/TG chr7:137680763-137680766 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_137680763_TGTG/-/TG chr7:137680763-137680766 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_137763607_C/A chr7:137763607 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_137876055_TT/- chr7:137876055-137876056 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_137940136_G/A chr7:137940136 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_138546996_GTGC/- chr7:138546996-138546999 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_138745008_A/T chr7:138745008 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_138785419_CACA/- chr7:138785419-138785422 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_139231656_-/CT chr7:139231655-139231656 CT ENSMUSG00000015980.14 ENSMUST00000016124.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139231656_-/CT chr7:139231655-139231656 CT ENSMUSG00000015980.14 ENSMUST00000106104.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2647;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139231656_-/CT chr7:139231655-139231656 CT ENSMUSG00000015980.14 ENSMUST00000126213.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139231656_-/CT chr7:139231655-139231656 CT ENSMUSG00000015980.14 ENSMUST00000142176.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4237;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139447823_-/G chr7:139447822-139447823 G ENSMUSG00000025477.14 ENSMUST00000026550.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139447823_-/G chr7:139447822-139447823 G ENSMUSG00000025477.14 ENSMUST00000097975.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139447823_-/G chr7:139447822-139447823 G ENSMUSG00000025477.14 ENSMUST00000106098.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139925227_TCTC/- chr7:139925227-139925230 - ENSMUSG00000066129.15 ENSMUST00000053445.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139925227_TCTC/- chr7:139925227-139925230 - ENSMUSG00000066129.15 ENSMUST00000154782.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139925227_TCTC/- chr7:139925227-139925230 - ENSMUSG00000066129.15 ENSMUST00000156941.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000025473.16 ENSMUST00000026546.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000073795.11 ENSMUST00000097970.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000025473.16 ENSMUST00000106069.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000073795.11 ENSMUST00000121412.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2602;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000025473.16 ENSMUST00000128332.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000025473.16 ENSMUST00000132903.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=957;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000086742.8 ENSMUST00000139218.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2348;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000073795.11 ENSMUST00000146974.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2602;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000025473.16 ENSMUST00000148670.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2529;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000025473.16 ENSMUST00000156647.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000073795.11 ENSMUST00000209335.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_139981325_G/T chr7:139981325 T ENSMUSG00000073795.11 ENSMUST00000210254.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_140474680_A/T chr7:140474680 T ENSMUSG00000110169.1 ENSMUST00000211776.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4080;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_140719846_GTGT/-/GT chr7:140719846-140719849 - ENSMUSG00000110199.2 ENSMUST00000211706.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1433;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_140719846_GTGT/-/GT chr7:140719846-140719849 GT ENSMUSG00000110199.2 ENSMUST00000211706.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1433;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_140719846_GTGT/-/GT chr7:140719846-140719849 - ENSMUSG00000110199.2 ENSMUST00000218525.1 Transcript non_coding_transcript_exon_variant 1773-1776 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_140719846_GTGT/-/GT chr7:140719846-140719849 GT ENSMUSG00000110199.2 ENSMUST00000218525.1 Transcript non_coding_transcript_exon_variant 1773-1776 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_140984530_A/- chr7:140984530 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr7_141381877_-/TATC chr7:141381876-141381877 TATC ENSMUSG00000077716.1 ENSMUST00000104528.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4618;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CA ENSMUSG00000002957.11 ENSMUST00000003038.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4911;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CG ENSMUSG00000002957.11 ENSMUST00000003038.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4911;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CA ENSMUSG00000048191.15 ENSMUST00000062451.13 Transcript missense_variant 6652-6653 6641-6642 2214 T/M aCA/aTG - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CG ENSMUSG00000048191.15 ENSMUST00000062451.13 Transcript synonymous_variant 6652-6653 6641-6642 2214 T aCA/aCG - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CA ENSMUSG00000048191.15 ENSMUST00000189314.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CG ENSMUSG00000048191.15 ENSMUST00000189314.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CA ENSMUSG00000048191.15 ENSMUST00000190907.1 Transcript missense_variant 6836-6837 6836-6837 2279 T/M aCA/aTG - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_141637922_TG/CA/CG chr7:141637922-141637923 CG ENSMUSG00000048191.15 ENSMUST00000190907.1 Transcript synonymous_variant 6836-6837 6836-6837 2279 T aCA/aCG - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_142367123_TT/- chr7:142367123-142367124 - ENSMUSG00000045777.14 ENSMUST00000059223.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_142367123_TT/- chr7:142367123-142367124 - ENSMUSG00000045777.14 ENSMUST00000084412.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_142367123_TT/- chr7:142367123-142367124 - ENSMUSG00000045777.14 ENSMUST00000105988.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_142367123_TT/- chr7:142367123-142367124 - ENSMUSG00000045777.14 ENSMUST00000123543.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4019;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_142367123_TT/- chr7:142367123-142367124 - ENSMUSG00000110040.1 ENSMUST00000133843.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4024;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_142367123_TT/- chr7:142367123-142367124 - ENSMUSG00000045777.14 ENSMUST00000140032.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_142367123_TT/- chr7:142367123-142367124 - ENSMUSG00000110040.1 ENSMUST00000209263.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3972;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 - ENSMUSG00000059119.9 ENSMUST00000072727.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2021;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 TTTT ENSMUSG00000059119.9 ENSMUST00000072727.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2021;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 - ENSMUSG00000059119.9 ENSMUST00000208190.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2025;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 TTTT ENSMUSG00000059119.9 ENSMUST00000208190.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2025;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 - ENSMUSG00000059119.9 ENSMUST00000208282.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3006;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 TTTT ENSMUSG00000059119.9 ENSMUST00000208282.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3006;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 - ENSMUSG00000059119.9 ENSMUST00000209098.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2030;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143511556_TTT/-/TTTT chr7:143511556-143511558 TTTT ENSMUSG00000059119.9 ENSMUST00000209098.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2030;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143700231_ATCT/- chr7:143700231-143700234 - ENSMUSG00000037606.18 ENSMUST00000020411.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143700231_ATCT/- chr7:143700231-143700234 - ENSMUSG00000037606.18 ENSMUST00000119499.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_143700231_ATCT/- chr7:143700231-143700234 - ENSMUSG00000037606.18 ENSMUST00000149736.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2820;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_144785726_CACA/- chr7:144785726-144785729 - ENSMUSG00000109442.1 ENSMUST00000207398.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1312;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr7_144809647_TTTA/- chr7:144809647-144809650 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_3162881_TT/-/TTT chr8:3162881-3162882 - ENSMUSG00000005534.10 ENSMUST00000091291.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_3162881_TT/-/TTT chr8:3162881-3162882 TTT ENSMUSG00000005534.10 ENSMUST00000091291.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_3162881_TT/-/TTT chr8:3162881-3162882 - ENSMUSG00000005534.10 ENSMUST00000208839.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3326;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_3162881_TT/-/TTT chr8:3162881-3162882 TTT ENSMUSG00000005534.10 ENSMUST00000208839.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3326;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_3648647_A/T chr8:3648647 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_4219411_ACAC/- chr8:4219411-4219414 - ENSMUSG00000064125.14 ENSMUST00000168386.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2099;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_4219411_ACAC/- chr8:4219411-4219414 - ENSMUSG00000064125.14 ENSMUST00000175906.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2259;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_4219411_ACAC/- chr8:4219411-4219414 - ENSMUSG00000064125.14 ENSMUST00000176227.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1952;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_4219411_ACAC/- chr8:4219411-4219414 - ENSMUSG00000064125.14 ENSMUST00000177491.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_4380334_G/A chr8:4380334 A ENSMUSG00000109356.1 ENSMUST00000208928.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_4787995_-/TCC chr8:4787994-4787995 TCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_5168851_TT/- chr8:5168851-5168852 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_5248384_GA/G/AA chr8:5248384-5248385 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_5248384_GA/G/AA chr8:5248384-5248385 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_5722977_GTGT/-/GT chr8:5722977-5722980 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_5722977_GTGT/-/GT chr8:5722977-5722980 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_6145229_-/CTTT chr8:6145228-6145229 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_6590410_T/C chr8:6590410 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_7070397_TCTC/- chr8:7070397-7070400 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_7618723_G/T chr8:7618723 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_8732776_GCA/- chr8:8732776-8732778 - ENSMUSG00000109371.1 ENSMUST00000207035.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_8732776_GCA/- chr8:8732776-8732778 - ENSMUSG00000109062.1 ENSMUST00000209128.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3192;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_8732782_C/T chr8:8732782 T ENSMUSG00000109371.1 ENSMUST00000207035.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_8732782_C/T chr8:8732782 T ENSMUSG00000109062.1 ENSMUST00000209128.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3188;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_9125836_A/T chr8:9125836 T ENSMUSG00000108848.1 ENSMUST00000207701.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3587;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_9125836_A/T chr8:9125836 T ENSMUSG00000108848.1 ENSMUST00000208031.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_9483068_GTGT/- chr8:9483068-9483071 - ENSMUSG00000079157.4 ENSMUST00000110969.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_9483068_GTGT/- chr8:9483068-9483071 - ENSMUSG00000079157.4 ENSMUST00000207869.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_9483068_GTGT/- chr8:9483068-9483071 - ENSMUSG00000079157.4 ENSMUST00000208933.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_10864653_T/G chr8:10864653 G ENSMUSG00000108961.1 ENSMUST00000207174.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_11525154_ACACAC/- chr8:11525154-11525159 - ENSMUSG00000056228.10 ENSMUST00000049461.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_11525154_ACACAC/- chr8:11525154-11525159 - ENSMUSG00000056228.10 ENSMUST00000209218.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_11525154_ACACAC/- chr8:11525154-11525159 - ENSMUSG00000056228.10 ENSMUST00000209236.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4453;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_11525154_ACACAC/- chr8:11525154-11525159 - ENSMUSG00000056228.10 ENSMUST00000210478.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_11525154_ACACAC/- chr8:11525154-11525159 - ENSMUSG00000056228.10 ENSMUST00000210599.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=865;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_11525154_ACACAC/- chr8:11525154-11525159 - ENSMUSG00000056228.10 ENSMUST00000211172.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4768;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_11525154_ACACAC/- chr8:11525154-11525159 - ENSMUSG00000056228.10 ENSMUST00000211406.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880922_G/T chr8:12880922 T ENSMUSG00000031442.20 ENSMUST00000095456.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880922_G/T chr8:12880922 T ENSMUSG00000079146.2 ENSMUST00000110860.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880922_G/T chr8:12880922 T ENSMUSG00000031442.20 ENSMUST00000138387.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880922_G/T chr8:12880922 T ENSMUSG00000085465.1 ENSMUST00000145372.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3578;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880922_G/T chr8:12880922 T ENSMUSG00000079146.2 ENSMUST00000149938.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880922_G/T chr8:12880922 T ENSMUSG00000031442.20 ENSMUST00000156560.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=776;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880926_ACA/- chr8:12880926-12880928 - ENSMUSG00000031442.20 ENSMUST00000095456.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880926_ACA/- chr8:12880926-12880928 - ENSMUSG00000079146.2 ENSMUST00000110860.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880926_ACA/- chr8:12880926-12880928 - ENSMUSG00000031442.20 ENSMUST00000138387.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880926_ACA/- chr8:12880926-12880928 - ENSMUSG00000085465.1 ENSMUST00000145372.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3582;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880926_ACA/- chr8:12880926-12880928 - ENSMUSG00000079146.2 ENSMUST00000149938.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_12880926_ACA/- chr8:12880926-12880928 - ENSMUSG00000031442.20 ENSMUST00000156560.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=780;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14661750_AA/- chr8:14661750-14661751 - ENSMUSG00000047495.15 ENSMUST00000043279.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14661750_AA/- chr8:14661750-14661751 - ENSMUSG00000047495.15 ENSMUST00000133298.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14661750_AA/- chr8:14661750-14661751 - ENSMUSG00000047495.15 ENSMUST00000141214.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14661750_AA/- chr8:14661750-14661751 - ENSMUSG00000047495.15 ENSMUST00000150247.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14661750_AA/- chr8:14661750-14661751 - ENSMUSG00000047495.15 ENSMUST00000152652.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 - ENSMUSG00000047495.15 ENSMUST00000043279.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 A ENSMUSG00000047495.15 ENSMUST00000043279.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 - ENSMUSG00000047495.15 ENSMUST00000129119.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1124;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 A ENSMUSG00000047495.15 ENSMUST00000129119.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1124;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 - ENSMUSG00000047495.15 ENSMUST00000133298.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=842;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 A ENSMUSG00000047495.15 ENSMUST00000133298.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=842;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 - ENSMUSG00000047495.15 ENSMUST00000150247.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1814;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 A ENSMUSG00000047495.15 ENSMUST00000150247.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1814;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 - ENSMUSG00000047495.15 ENSMUST00000152652.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_14848522_AA/-/A chr8:14848522-14848523 A ENSMUSG00000047495.15 ENSMUST00000152652.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1414;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15041796_A/G chr8:15041796 G ENSMUSG00000049008.4 ENSMUST00000050493.3 Transcript synonymous_variant 1401 1056 352 P ccT/ccC - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15041796_A/G chr8:15041796 G ENSMUSG00000049008.4 ENSMUST00000123331.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=706;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15041796_A/G chr8:15041796 G ENSMUSG00000049008.4 ENSMUST00000179941.1 Transcript synonymous_variant 1282 1056 352 P ccT/ccC - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15041796_A/G chr8:15041796 G ENSMUSG00000109871.1 ENSMUST00000209549.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2767;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15041796_A/G chr8:15041796 G ENSMUSG00000109965.1 ENSMUST00000209938.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4416;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15083910_-/ATCT chr8:15083909-15083910 ATCT ENSMUSG00000031461.4 ENSMUST00000033842.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15243461_GTGT/- chr8:15243461-15243464 - ENSMUSG00000110286.1 ENSMUST00000211278.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15475551_AA/-/A chr8:15475551-15475552 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_15475551_AA/-/A chr8:15475551-15475552 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_15664098_C/T chr8:15664098 T ENSMUSG00000110217.1 ENSMUST00000211080.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_15868580_CACA/-/CA chr8:15868580-15868583 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_15868580_CACA/-/CA chr8:15868580-15868583 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_16601099_GTGT/-/GT chr8:16601099-16601102 - ENSMUSG00000060924.15 ENSMUST00000082104.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_16601099_GTGT/-/GT chr8:16601099-16601102 GT ENSMUSG00000060924.15 ENSMUST00000082104.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_16601099_GTGT/-/GT chr8:16601099-16601102 - ENSMUSG00000060924.15 ENSMUST00000131778.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_16601099_GTGT/-/GT chr8:16601099-16601102 GT ENSMUSG00000060924.15 ENSMUST00000131778.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_16601099_GTGT/-/GT chr8:16601099-16601102 - ENSMUSG00000060924.15 ENSMUST00000137947.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_16601099_GTGT/-/GT chr8:16601099-16601102 GT ENSMUSG00000060924.15 ENSMUST00000137947.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_16601099_GTGT/-/GT chr8:16601099-16601102 - ENSMUSG00000060924.15 ENSMUST00000138348.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_16601099_GTGT/-/GT chr8:16601099-16601102 GT ENSMUSG00000060924.15 ENSMUST00000138348.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17339676_G/T chr8:17339676 T ENSMUSG00000060924.15 ENSMUST00000082104.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17339676_G/T chr8:17339676 T ENSMUSG00000060924.15 ENSMUST00000131778.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17339676_G/T chr8:17339676 T ENSMUSG00000060924.15 ENSMUST00000133933.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17339676_G/T chr8:17339676 T ENSMUSG00000060924.15 ENSMUST00000137947.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17339676_G/T chr8:17339676 T ENSMUSG00000060924.15 ENSMUST00000138348.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17499079_G/C chr8:17499079 C ENSMUSG00000060924.15 ENSMUST00000082104.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17499079_G/C chr8:17499079 C ENSMUSG00000060924.15 ENSMUST00000122983.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17499079_G/C chr8:17499079 C ENSMUSG00000060924.15 ENSMUST00000131778.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17499079_G/C chr8:17499079 C ENSMUSG00000060924.15 ENSMUST00000133933.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17499079_G/C chr8:17499079 C ENSMUSG00000060924.15 ENSMUST00000137947.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17499079_G/C chr8:17499079 C ENSMUSG00000060924.15 ENSMUST00000138348.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_17643652_T/C chr8:17643652 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_17832730_ACAC/-/AC chr8:17832730-17832733 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_17832730_ACAC/-/AC chr8:17832730-17832733 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_18198340_A/T chr8:18198340 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_18211737_AGAAA/- chr8:18211737-18211741 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_18916381_AA/- chr8:18916381-18916382 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_19684354_GTGT/- chr8:19684354-19684357 - ENSMUSG00000087153.8 ENSMUST00000155660.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_19697940_T/C chr8:19697940 C ENSMUSG00000087153.8 ENSMUST00000155660.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=204;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_19703146_A/G chr8:19703146 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_19760257_A/C chr8:19760257 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_19799035_A/- chr8:19799035 - ENSMUSG00000097230.1 ENSMUST00000180757.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=487;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_19928615_C/T chr8:19928615 T ENSMUSG00000110591.1 ENSMUST00000211848.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2902;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20006818_G/A chr8:20006818 A ENSMUSG00000110649.1 ENSMUST00000212174.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20086831_G/C chr8:20086831 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_20126829_C/G chr8:20126829 G ENSMUSG00000110458.1 ENSMUST00000211922.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4335;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20156091_A/G chr8:20156091 G ENSMUSG00000096401.2 ENSMUST00000096485.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4426;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20270942_T/A chr8:20270942 A ENSMUSG00000071796.13 ENSMUST00000150051.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20270942_T/A chr8:20270942 A ENSMUSG00000071796.13 ENSMUST00000153748.1 Transcript non_coding_transcript_exon_variant 2003 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20293113_AA/GA/GT chr8:20293113-20293114 GA ENSMUSG00000071796.13 ENSMUST00000153748.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20293113_AA/GA/GT chr8:20293113-20293114 GT ENSMUSG00000071796.13 ENSMUST00000153748.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20293113_AA/GA/GT chr8:20293113-20293114 GA ENSMUSG00000097263.1 ENSMUST00000181248.1 Transcript non_coding_transcript_exon_variant 637-638 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20293113_AA/GA/GT chr8:20293113-20293114 GT ENSMUSG00000097263.1 ENSMUST00000181248.1 Transcript non_coding_transcript_exon_variant 637-638 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20354614_G/A chr8:20354614 A ENSMUSG00000074449.3 ENSMUST00000084046.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20354614_G/A chr8:20354614 A ENSMUSG00000097263.1 ENSMUST00000181248.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20430797_C/T chr8:20430797 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_20521593_TC/AA chr8:20521593-20521594 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_20565900_G/T chr8:20565900 T ENSMUSG00000095403.8 ENSMUST00000178995.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1697;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_20678879_G/T chr8:20678879 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_20702067_C/T chr8:20702067 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_20702070_C/T chr8:20702070 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_20822137_G/- chr8:20822137 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_21204773_T/- chr8:21204773 - ENSMUSG00000079116.1 ENSMUST00000110754.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2234;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_21228390_AGAG/- chr8:21228390-21228393 - ENSMUSG00000080722.3 ENSMUST00000117139.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3673;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_21228390_AGAG/- chr8:21228390-21228393 - ENSMUSG00000095328.1 ENSMUST00000122172.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2143;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_22198236_CACACA/-/CACA chr8:22198236-22198241 - ENSMUSG00000031479.9 ENSMUST00000033866.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_22198236_CACACA/-/CACA chr8:22198236-22198241 CACA ENSMUSG00000031479.9 ENSMUST00000033866.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000084038.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000110688.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000117270.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000117296.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000117662.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000118733.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000121802.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000123418.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000141784.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000152511.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000173248.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23095578_A/G chr8:23095578 G ENSMUSG00000031543.18 ENSMUST00000173573.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_23214725_-/A chr8:23214724-23214725 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_23318852_GTGT/- chr8:23318852-23318855 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_24216977_GTGT/- chr8:24216977-24216980 - ENSMUSG00000109419.1 ENSMUST00000207606.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3530;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24420871_CACA/-/CA chr8:24420871-24420874 - ENSMUSG00000097654.1 ENSMUST00000181338.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1530;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24420871_CACA/-/CA chr8:24420871-24420874 CA ENSMUSG00000097654.1 ENSMUST00000181338.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1530;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24420871_CACA/-/CA chr8:24420871-24420874 - ENSMUSG00000109141.1 ENSMUST00000208709.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3934;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24420871_CACA/-/CA chr8:24420871-24420874 CA ENSMUSG00000109141.1 ENSMUST00000208709.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3934;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24445161_TTT/- chr8:24445161-24445163 - ENSMUSG00000108820.1 ENSMUST00000209183.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1934;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24510744_T/A chr8:24510744 A ENSMUSG00000109237.1 ENSMUST00000208727.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2662;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24895743_A/T chr8:24895743 T ENSMUSG00000037437.18 ENSMUST00000119720.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_24895743_A/T chr8:24895743 T ENSMUSG00000037437.18 ENSMUST00000121438.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_25131722_AA/-/AAA chr8:25131722-25131723 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_25131722_AA/-/AAA chr8:25131722-25131723 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_25314473_G/A chr8:25314473 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_25314480_T/C chr8:25314480 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_26716278_TGTG/- chr8:26716278-26716281 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_26788239_G/A chr8:26788239 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_27202937_TT/-/TTT chr8:27202937-27202938 - ENSMUSG00000039720.7 ENSMUST00000038174.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 TTT ENSMUSG00000039720.7 ENSMUST00000038174.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 - ENSMUSG00000039720.7 ENSMUST00000209281.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 TTT ENSMUSG00000039720.7 ENSMUST00000209281.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 - ENSMUSG00000039720.7 ENSMUST00000209299.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 TTT ENSMUSG00000039720.7 ENSMUST00000209299.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 - ENSMUSG00000039720.7 ENSMUST00000209699.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=404;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 TTT ENSMUSG00000039720.7 ENSMUST00000209699.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=404;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 - ENSMUSG00000039720.7 ENSMUST00000211002.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_27202937_TT/-/TTT chr8:27202937-27202938 TTT ENSMUSG00000039720.7 ENSMUST00000211002.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_28161318_TATA/-/TA chr8:28161318-28161321 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_28161318_TATA/-/TA chr8:28161318-28161321 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_29194130_G/A chr8:29194130 A ENSMUSG00000063626.6 ENSMUST00000168630.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194130_G/A chr8:29194130 A ENSMUSG00000063626.6 ENSMUST00000209401.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194130_G/A chr8:29194130 A ENSMUSG00000063626.6 ENSMUST00000210298.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194130_G/A chr8:29194130 A ENSMUSG00000063626.6 ENSMUST00000210785.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194130_G/A chr8:29194130 A ENSMUSG00000063626.6 ENSMUST00000211448.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194137_C/A chr8:29194137 A ENSMUSG00000063626.6 ENSMUST00000168630.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194137_C/A chr8:29194137 A ENSMUSG00000063626.6 ENSMUST00000209401.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194137_C/A chr8:29194137 A ENSMUSG00000063626.6 ENSMUST00000210298.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194137_C/A chr8:29194137 A ENSMUSG00000063626.6 ENSMUST00000210785.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_29194137_C/A chr8:29194137 A ENSMUSG00000063626.6 ENSMUST00000211448.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_30163417_T/A chr8:30163417 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_30163668_CA/AT chr8:30163668-30163669 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_30705234_A/G chr8:30705234 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_30705241_T/C chr8:30705241 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031578.5 ENSMUST00000033983.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031578.5 ENSMUST00000033983.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031577.10 ENSMUST00000098842.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=703;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031577.10 ENSMUST00000098842.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=703;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031577.10 ENSMUST00000209851.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4351;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031577.10 ENSMUST00000209851.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4351;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031577.10 ENSMUST00000209986.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2066;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031577.10 ENSMUST00000209986.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2066;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031578.5 ENSMUST00000209991.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=695;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031578.5 ENSMUST00000209991.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=695;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031577.10 ENSMUST00000210129.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1510;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031577.10 ENSMUST00000210129.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1510;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031578.5 ENSMUST00000210278.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031578.5 ENSMUST00000210278.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 - ENSMUSG00000031578.5 ENSMUST00000210450.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=648;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31165405_TTT/-/TT chr8:31165405-31165407 TT ENSMUSG00000031578.5 ENSMUST00000210450.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=648;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_31410475_A/T chr8:31410475 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_32639733_C/G chr8:32639733 G ENSMUSG00000062991.7 ENSMUST00000209022.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_32639733_C/G chr8:32639733 G ENSMUSG00000062991.7 ENSMUST00000209107.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_33238126_T/A chr8:33238126 A ENSMUSG00000031583.13 ENSMUST00000033990.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_33238126_T/A chr8:33238126 A ENSMUSG00000031583.13 ENSMUST00000033991.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_33238126_T/A chr8:33238126 A ENSMUSG00000031583.13 ENSMUST00000211498.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_33942744_CA/C/AA chr8:33942744-33942745 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_33942744_CA/C/AA chr8:33942744-33942745 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_33971468_T/G chr8:33971468 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_34732449_T/G chr8:34732449 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_35389578_AA/- chr8:35389578-35389579 - ENSMUSG00000046794.9 ENSMUST00000070481.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1439;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_35389578_AA/- chr8:35389578-35389579 - ENSMUSG00000046794.9 ENSMUST00000210337.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1449;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_35389578_AA/- chr8:35389578-35389579 - ENSMUSG00000046794.9 ENSMUST00000211648.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1444;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_35458863_ACAC/-/AC chr8:35458863-35458866 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_35458863_ACAC/-/AC chr8:35458863-35458866 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_35473002_AAA/-/AA chr8:35473002-35473004 - ENSMUSG00000031527.7 ENSMUST00000033927.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_35473002_AAA/-/AA chr8:35473002-35473004 AA ENSMUSG00000031527.7 ENSMUST00000033927.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_35955944_CACACA/- chr8:35955944-35955949 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_35958165_AA/- chr8:35958165-35958166 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_35962979_GG/- chr8:35962979-35962980 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_36076899_ATATAT/- chr8:36076899-36076904 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_36672596_T/A chr8:36672596 A ENSMUSG00000031523.16 ENSMUST00000098826.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_36672596_T/A chr8:36672596 A ENSMUSG00000031523.16 ENSMUST00000163663.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_36964924_GAGAGA/- chr8:36964924-36964929 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_37514204_TGTG/- chr8:37514204-37514207 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_38799007_TACTA/- chr8:38799007-38799011 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_39323881_TGTG/- chr8:39323881-39323884 - ENSMUSG00000109827.1 ENSMUST00000209966.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_39346011_GAGAGA/-/GAGA chr8:39346011-39346016 - ENSMUSG00000109827.1 ENSMUST00000209966.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_39346011_GAGAGA/-/GAGA chr8:39346011-39346016 GAGA ENSMUSG00000109827.1 ENSMUST00000209966.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_40153004_TCTC/- chr8:40153004-40153007 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_40625601_TGTG/- chr8:40625601-40625604 - ENSMUSG00000039431.16 ENSMUST00000048890.16 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_40625601_TGTG/- chr8:40625601-40625604 - ENSMUSG00000039431.16 ENSMUST00000048898.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_40625601_TGTG/- chr8:40625601-40625604 - ENSMUSG00000039431.16 ENSMUST00000173957.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_40625601_TGTG/- chr8:40625601-40625604 - ENSMUSG00000039431.16 ENSMUST00000174205.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_40625601_TGTG/- chr8:40625601-40625604 - ENSMUSG00000039431.16 ENSMUST00000174537.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_41967862_-/T chr8:41967861-41967862 T ENSMUSG00000102046.1 ENSMUST00000188324.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_42081087_C/T chr8:42081087 T ENSMUSG00000095057.1 ENSMUST00000107130.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=373;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_42304312_G/A chr8:42304312 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_43245143_AAAA/-/AA chr8:43245143-43245146 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_43245143_AAAA/-/AA chr8:43245143-43245146 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_44300013_TCTC/- chr8:44300013-44300016 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_44405788_-/TGTGTGTGTGTG chr8:44405787-44405788 TGTGTGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_44721733_C/T chr8:44721733 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_45385540_TT/-/TTT chr8:45385540-45385541 - ENSMUSG00000070044.15 ENSMUST00000093526.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3249;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45385540_TT/-/TTT chr8:45385540-45385541 TTT ENSMUSG00000070044.15 ENSMUST00000093526.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3249;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000067065.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000067107.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000124544.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000126067.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4926;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000130011.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000130850.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4883;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000132139.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000134675.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000085440.1 ENSMUST00000135116.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000135336.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000138049.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000139103.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000139869.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000141039.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000143820.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000149752.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000150102.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000153798.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000171337.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000210946.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45751515_GTGT/- chr8:45751515-45751518 - ENSMUSG00000031626.17 ENSMUST00000211095.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45916489_T/A chr8:45916489 A ENSMUSG00000031636.7 ENSMUST00000034053.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45916489_T/A chr8:45916489 A ENSMUSG00000031636.7 ENSMUST00000209216.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45916489_T/A chr8:45916489 A ENSMUSG00000031636.7 ENSMUST00000210422.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45916489_T/A chr8:45916489 A ENSMUSG00000110071.1 ENSMUST00000210432.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4383;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45919705_GTGT/- chr8:45919705-45919708 - ENSMUSG00000031636.7 ENSMUST00000034053.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=157;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45919705_GTGT/- chr8:45919705-45919708 - ENSMUSG00000031636.7 ENSMUST00000209216.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=467;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45919705_GTGT/- chr8:45919705-45919708 - ENSMUSG00000031636.7 ENSMUST00000210422.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=367;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_45919705_GTGT/- chr8:45919705-45919708 - ENSMUSG00000110071.1 ENSMUST00000210432.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1164;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46584427_G/- chr8:46584427 - ENSMUSG00000031629.14 ENSMUST00000034045.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4420;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46584427_G/- chr8:46584427 - ENSMUSG00000038225.15 ENSMUST00000040468.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46584427_G/- chr8:46584427 - ENSMUSG00000038225.15 ENSMUST00000123328.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2226;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46584427_G/- chr8:46584427 - ENSMUSG00000031629.14 ENSMUST00000135432.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4420;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46584427_G/- chr8:46584427 - ENSMUSG00000038225.15 ENSMUST00000136335.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46584427_G/- chr8:46584427 - ENSMUSG00000038225.15 ENSMUST00000209787.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46584427_G/- chr8:46584427 - ENSMUSG00000038225.15 ENSMUST00000211400.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_46686549_G/A chr8:46686549 A ENSMUSG00000097534.3 ENSMUST00000208508.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_47770555_CAA/TCT chr8:47770555-47770557 TCT ENSMUSG00000110539.1 ENSMUST00000211965.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2998;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_47770555_CAA/TCT chr8:47770555-47770557 TCT ENSMUSG00000110604.1 ENSMUST00000212236.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4430;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_47919801_AAA/- chr8:47919801-47919803 - ENSMUSG00000031563.8 ENSMUST00000057561.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48037429_T/C chr8:48037429 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_48051358_G/A chr8:48051358 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_48131610_TT/-/TTT chr8:48131610-48131611 - ENSMUSG00000031562.15 ENSMUST00000033966.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 TTT ENSMUSG00000031562.15 ENSMUST00000033966.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 - ENSMUSG00000031562.15 ENSMUST00000098773.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 TTT ENSMUSG00000031562.15 ENSMUST00000098773.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 - ENSMUSG00000031562.15 ENSMUST00000170263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 TTT ENSMUSG00000031562.15 ENSMUST00000170263.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 - ENSMUSG00000031562.15 ENSMUST00000173991.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 TTT ENSMUSG00000031562.15 ENSMUST00000173991.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 - ENSMUSG00000031562.15 ENSMUST00000174278.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 TTT ENSMUSG00000031562.15 ENSMUST00000174278.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 - ENSMUSG00000031562.15 ENSMUST00000174379.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 TTT ENSMUSG00000031562.15 ENSMUST00000174379.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 - ENSMUSG00000031562.15 ENSMUST00000174818.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48131610_TT/-/TTT chr8:48131610-48131611 TTT ENSMUSG00000031562.15 ENSMUST00000174818.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_48199519_TG/- chr8:48199519-48199520 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_49141520_T/G chr8:49141520 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_49936262_ACAC/-/ACACAC chr8:49936262-49936265 - ENSMUSG00000109907.1 ENSMUST00000209286.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_49936262_ACAC/-/ACACAC chr8:49936262-49936265 ACACAC ENSMUSG00000109907.1 ENSMUST00000209286.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_49936262_ACAC/-/ACACAC chr8:49936262-49936265 - ENSMUSG00000109907.1 ENSMUST00000209758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_49936262_ACAC/-/ACACAC chr8:49936262-49936265 ACACAC ENSMUSG00000109907.1 ENSMUST00000209758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_50104943_AAA/- chr8:50104943-50104945 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_50251054_G/A chr8:50251054 A ENSMUSG00000109741.1 ENSMUST00000209514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_50251054_G/A chr8:50251054 A ENSMUSG00000109838.1 ENSMUST00000210850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_50251060_C/T chr8:50251060 T ENSMUSG00000109741.1 ENSMUST00000209514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_50251060_C/T chr8:50251060 T ENSMUSG00000109838.1 ENSMUST00000210850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_50298135_-/TT chr8:50298134-50298135 TT ENSMUSG00000109741.1 ENSMUST00000209514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_50298135_-/TT chr8:50298134-50298135 TT ENSMUSG00000109838.1 ENSMUST00000210850.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_51136887_AAA/-/AA/AAAA chr8:51136887-51136889 - ENSMUSG00000109840.1 ENSMUST00000210194.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=741;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_51136887_AAA/-/AA/AAAA chr8:51136887-51136889 AA ENSMUSG00000109840.1 ENSMUST00000210194.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=741;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_51136887_AAA/-/AA/AAAA chr8:51136887-51136889 AAAA ENSMUSG00000109840.1 ENSMUST00000210194.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=741;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_51303579_TCTC/- chr8:51303579-51303582 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_51561362_CTCTCT/- chr8:51561362-51561367 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_51937023_TT/-/TTT chr8:51937023-51937024 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_51937023_TT/-/TTT chr8:51937023-51937024 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_51994308_T/G chr8:51994308 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_52303969_-/T chr8:52303968-52303969 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_52303969_G/T chr8:52303969 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_52593761_C/- chr8:52593761 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_53151886_TGTGTG/- chr8:53151886-53151891 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_53778312_-/AGAT chr8:53778311-53778312 AGAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_53946512_CACA/- chr8:53946512-53946515 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_54116728_CGTGT/C/TGTGT chr8:54116728-54116732 C ENSMUSG00000031520.6 ENSMUST00000033919.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54116728_CGTGT/C/TGTGT chr8:54116728-54116732 TGTGT ENSMUSG00000031520.6 ENSMUST00000033919.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54116728_CGTGT/C/TGTGT chr8:54116728-54116732 C ENSMUSG00000031520.6 ENSMUST00000209703.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54116728_CGTGT/C/TGTGT chr8:54116728-54116732 TGTGT ENSMUSG00000031520.6 ENSMUST00000209703.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54116728_CGTGT/C/TGTGT chr8:54116728-54116732 C ENSMUSG00000031520.6 ENSMUST00000210831.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54116728_CGTGT/C/TGTGT chr8:54116728-54116732 TGTGT ENSMUSG00000031520.6 ENSMUST00000210831.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000126316.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000127511.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000129132.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000144711.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000148806.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000150488.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000175915.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54720286_-/TATA chr8:54720285-54720286 TATA ENSMUSG00000039375.16 ENSMUST00000176866.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_54841458_C/A chr8:54841458 A ENSMUSG00000039375.16 ENSMUST00000176866.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_55374921_GTGTG/- chr8:55374921-55374925 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_55610296_ACAC/- chr8:55610296-55610299 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_55624089_CACA/- chr8:55624089-55624092 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_56558358_TT/- chr8:56558358-56558359 - ENSMUSG00000038206.13 ENSMUST00000040218.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_56558358_TT/- chr8:56558358-56558359 - ENSMUSG00000076392.1 ENSMUST00000102437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2942;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_56558358_TT/- chr8:56558358-56558359 - ENSMUSG00000038206.13 ENSMUST00000110322.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_56558358_TT/- chr8:56558358-56558359 - ENSMUSG00000038206.13 ENSMUST00000156840.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_56558358_TT/- chr8:56558358-56558359 - ENSMUSG00000110318.1 ENSMUST00000209582.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2557;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_56558358_TT/- chr8:56558358-56558359 - ENSMUSG00000038206.13 ENSMUST00000210863.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_56627303_ATAA/- chr8:56627303-56627306 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_56781084_TCTC/- chr8:56781084-56781087 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_57171045_G/A chr8:57171045 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_57272610_AAAA/-/AAA chr8:57272610-57272613 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_57272610_AAAA/-/AAA chr8:57272610-57272613 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_57281740_CACA/- chr8:57281740-57281743 - ENSMUSG00000100510.7 ENSMUST00000226075.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57520987_TTTT/- chr8:57520987-57520990 - ENSMUSG00000031608.13 ENSMUST00000034021.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2838;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57520987_TTTT/- chr8:57520987-57520990 - ENSMUSG00000054717.7 ENSMUST00000067925.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4988;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57520987_TTTT/- chr8:57520987-57520990 - ENSMUSG00000031608.13 ENSMUST00000110316.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3710;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57520987_TTTT/- chr8:57520987-57520990 - ENSMUSG00000109899.1 ENSMUST00000210821.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=101;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57557940_CACA/-/CA chr8:57557940-57557943 - ENSMUSG00000031608.13 ENSMUST00000034021.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57557940_CACA/-/CA chr8:57557940-57557943 CA ENSMUSG00000031608.13 ENSMUST00000034021.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57557940_CACA/-/CA chr8:57557940-57557943 - ENSMUSG00000031608.13 ENSMUST00000110316.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57557940_CACA/-/CA chr8:57557940-57557943 CA ENSMUSG00000031608.13 ENSMUST00000110316.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57557940_CACA/-/CA chr8:57557940-57557943 - ENSMUSG00000031608.13 ENSMUST00000156907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57557940_CACA/-/CA chr8:57557940-57557943 CA ENSMUSG00000031608.13 ENSMUST00000156907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57985910_T/G chr8:57985910 G ENSMUSG00000096914.3 ENSMUST00000204128.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_57985913_G/A chr8:57985913 A ENSMUSG00000096914.3 ENSMUST00000204128.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_58074282_AT/- chr8:58074282-58074283 - ENSMUSG00000096914.3 ENSMUST00000204128.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_58126896_A/T chr8:58126896 T ENSMUSG00000096914.3 ENSMUST00000204128.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_58375308_CACA/-/CA chr8:58375308-58375311 - ENSMUSG00000096914.3 ENSMUST00000204128.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_58375308_CACA/-/CA chr8:58375308-58375311 CA ENSMUSG00000096914.3 ENSMUST00000204128.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_59352701_TATA/-/TA chr8:59352701-59352704 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_59352701_TATA/-/TA chr8:59352701-59352704 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_59495163_ACAC/- chr8:59495163-59495166 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_59650003_A/G chr8:59650003 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_60239732_G/T chr8:60239732 T ENSMUSG00000109966.1 ENSMUST00000210900.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_60617556_GTGT/- chr8:60617556-60617559 - ENSMUSG00000109930.1 ENSMUST00000210674.1 Transcript non_coding_transcript_exon_variant 2934-2937 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61280570_TT/- chr8:61280570-61280571 - ENSMUSG00000031642.9 ENSMUST00000034060.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61280570_TT/- chr8:61280570-61280571 - ENSMUSG00000099419.1 ENSMUST00000188654.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=951;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61280570_TT/- chr8:61280570-61280571 - ENSMUSG00000031642.9 ENSMUST00000209611.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61320437_C/T chr8:61320437 T ENSMUSG00000031642.9 ENSMUST00000034060.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61320437_C/T chr8:61320437 T ENSMUSG00000031642.9 ENSMUST00000209611.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61504292_TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGGGGGGGGGGGTATATGCATATATATGGGGGGGT/- chr8:61504292-61504360 - ENSMUSG00000031641.14 ENSMUST00000034058.13 Transcript 3_prime_UTR_variant 1907-1975 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61504292_TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGGGGGGGGGGGTATATGCATATATATGGGGGGGT/- chr8:61504292-61504360 - ENSMUSG00000031641.14 ENSMUST00000130495.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=963;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61504292_TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGGGGGGGGGGGTATATGCATATATATGGGGGGGT/- chr8:61504292-61504360 - ENSMUSG00000031641.14 ENSMUST00000150932.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=903;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_61504292_TGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAGAGGGGGGGGGGGTATATGCATATATATGGGGGGGT/- chr8:61504292-61504360 - ENSMUSG00000031641.14 ENSMUST00000155442.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=963;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_62156475_A/T chr8:62156475 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_62442392_TT/- chr8:62442392-62442393 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 - ENSMUSG00000054162.15 ENSMUST00000093480.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TA ENSMUSG00000054162.15 ENSMUST00000093480.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TATATA ENSMUSG00000054162.15 ENSMUST00000093480.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 - ENSMUSG00000054162.15 ENSMUST00000117377.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TA ENSMUSG00000054162.15 ENSMUST00000117377.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TATATA ENSMUSG00000054162.15 ENSMUST00000117377.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 - ENSMUSG00000054162.15 ENSMUST00000118003.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TA ENSMUSG00000054162.15 ENSMUST00000118003.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TATATA ENSMUSG00000054162.15 ENSMUST00000118003.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 - ENSMUSG00000054162.15 ENSMUST00000119068.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TA ENSMUSG00000054162.15 ENSMUST00000119068.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TATATA ENSMUSG00000054162.15 ENSMUST00000119068.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 - ENSMUSG00000054162.15 ENSMUST00000138398.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TA ENSMUSG00000054162.15 ENSMUST00000138398.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TATATA ENSMUSG00000054162.15 ENSMUST00000138398.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 - ENSMUSG00000110308.1 ENSMUST00000211588.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=937;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TA ENSMUSG00000110308.1 ENSMUST00000211588.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=937;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_63019926_TATA/-/TA/TATATA chr8:63019926-63019929 TATATA ENSMUSG00000110308.1 ENSMUST00000211588.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=937;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_65172747_TT/- chr8:65172747-65172748 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_65280746_GTGT/-/GT chr8:65280746-65280749 - ENSMUSG00000110226.1 ENSMUST00000209702.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1559;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_65280746_GTGT/-/GT chr8:65280746-65280749 GT ENSMUSG00000110226.1 ENSMUST00000209702.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1559;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_65542760_T/A chr8:65542760 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000072482.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000098708.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000110255.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000110256.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000110258.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000110259.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000152320.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66246679_GTGTGT/- chr8:66246679-66246684 - ENSMUSG00000036469.16 ENSMUST00000178982.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000072482.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000098708.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000110255.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000110256.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000110258.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000110259.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000152320.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_66375066_TT/- chr8:66375066-66375067 - ENSMUSG00000036469.16 ENSMUST00000178982.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000038959.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000059374.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000093468.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000093469.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000098696.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000120071.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000212505.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_67725933_A/G chr8:67725933 G ENSMUSG00000030465.19 ENSMUST00000212960.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_69370803_AGAG/- chr8:69370803-69370806 - ENSMUSG00000110444.1 ENSMUST00000072427.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1031;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_69370803_AGAG/- chr8:69370803-69370806 - ENSMUSG00000110444.1 ENSMUST00000213012.1 Transcript non_coding_transcript_exon_variant 3482-3485 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_69563999_A/G chr8:69563999 G ENSMUSG00000111594.1 ENSMUST00000216296.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_69969208_A/C chr8:69969208 C ENSMUSG00000036180.15 ENSMUST00000065169.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_69969208_A/C chr8:69969208 C ENSMUSG00000036180.15 ENSMUST00000116463.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_69969208_A/C chr8:69969208 C ENSMUSG00000036180.15 ENSMUST00000177851.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_69969208_A/C chr8:69969208 C ENSMUSG00000036180.15 ENSMUST00000212478.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70371407_AAAAA/- chr8:70371407-70371411 - ENSMUSG00000031849.9 ENSMUST00000003659.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2147;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70371407_AAAAA/- chr8:70371407-70371411 - ENSMUSG00000031849.9 ENSMUST00000212439.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3627;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70371407_AAAAA/- chr8:70371407-70371411 - ENSMUSG00000031849.9 ENSMUST00000213072.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2460;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70430714_GTGT/- chr8:70430714-70430717 - ENSMUSG00000003575.13 ENSMUST00000076615.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70430714_GTGT/- chr8:70430714-70430717 - ENSMUSG00000003575.13 ENSMUST00000125613.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70430714_GTGT/- chr8:70430714-70430717 - ENSMUSG00000003575.13 ENSMUST00000142769.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70430714_GTGT/- chr8:70430714-70430717 - ENSMUSG00000003575.13 ENSMUST00000153632.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70968729_T/A chr8:70968729 A ENSMUSG00000101854.2 ENSMUST00000211950.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_70968729_T/A chr8:70968729 A ENSMUSG00000101854.2 ENSMUST00000211987.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72108734_A/T chr8:72108734 T ENSMUSG00000088460.1 ENSMUST00000157835.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2500;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72108734_A/T chr8:72108734 T ENSMUSG00000046881.7 ENSMUST00000209675.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=752;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72108734_A/T chr8:72108734 T ENSMUSG00000046881.7 ENSMUST00000210435.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72108734_A/T chr8:72108734 T ENSMUSG00000046881.7 ENSMUST00000210923.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72193140_GATA/- chr8:72193140-72193143 - ENSMUSG00000062007.13 ENSMUST00000072097.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72193140_GATA/- chr8:72193140-72193143 - ENSMUSG00000062007.13 ENSMUST00000165324.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=300;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72224924_C/T chr8:72224924 T ENSMUSG00000003039.9 ENSMUST00000003123.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=506;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72224924_C/T chr8:72224924 T ENSMUSG00000003039.9 ENSMUST00000212117.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1494;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_72315943_ACAC/- chr8:72315943-72315946 - ENSMUSG00000055148.7 ENSMUST00000067912.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3087;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_73032952_A/T chr8:73032952 T ENSMUSG00000004383.18 ENSMUST00000004497.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_73032952_A/T chr8:73032952 T ENSMUSG00000004383.18 ENSMUST00000119826.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_73032952_A/T chr8:73032952 T ENSMUSG00000004383.18 ENSMUST00000212459.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_73544041_G/A chr8:73544041 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_73804769_CTCTCT/-/CTCT chr8:73804769-73804774 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_73804769_CTCTCT/-/CTCT chr8:73804769-73804774 CTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_74025876_TGTG/-/TGTGTG chr8:74025876-74025879 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_74025876_TGTG/-/TGTGTG chr8:74025876-74025879 TGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_74056683_C/T chr8:74056683 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_75988652_G/T chr8:75988652 T ENSMUSG00000031620.16 ENSMUST00000034033.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4174;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_75988652_G/T chr8:75988652 T ENSMUSG00000031620.16 ENSMUST00000121983.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4149;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_75988652_G/T chr8:75988652 T ENSMUSG00000110485.1 ENSMUST00000212103.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3857;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_75988652_G/T chr8:75988652 T ENSMUSG00000031620.16 ENSMUST00000212704.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4174;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_76423540_GTG/- chr8:76423540-76423542 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_77274189_GTGT/- chr8:77274189-77274192 - ENSMUSG00000037148.8 ENSMUST00000076316.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_77274189_GTGT/- chr8:77274189-77274192 - ENSMUSG00000037148.8 ENSMUST00000210519.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_77274189_GTGT/- chr8:77274189-77274192 - ENSMUSG00000037148.8 ENSMUST00000210922.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_77907341_G/A chr8:77907341 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000034111.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000209490.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000209992.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000210132.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000210515.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000210630.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000210703.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000211286.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713651_TCCCA/- chr8:78713651-78713655 - ENSMUSG00000031684.11 ENSMUST00000211332.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=894;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000034111.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000209490.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000209992.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000210132.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000210515.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000210630.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000210703.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000211286.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78713661_A/C chr8:78713661 C ENSMUSG00000031684.11 ENSMUST00000211332.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=904;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78759660_AA/-/AAA chr8:78759660-78759661 - ENSMUSG00000112190.1 ENSMUST00000218647.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78759660_AA/-/AAA chr8:78759660-78759661 AAA ENSMUSG00000112190.1 ENSMUST00000218647.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78820261_T/A chr8:78820261 A ENSMUSG00000031683.16 ENSMUST00000051867.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78820261_T/A chr8:78820261 A ENSMUSG00000031683.16 ENSMUST00000130325.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_78888958_TGTG/- chr8:78888958-78888961 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_78896859_G/A chr8:78896859 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_79462644_ACAC/- chr8:79462644-79462647 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_80859829_AA/- chr8:80859829-80859830 - ENSMUSG00000031714.9 ENSMUST00000034150.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_80859829_AA/- chr8:80859829-80859830 - ENSMUSG00000031714.9 ENSMUST00000210676.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_80864158_-/TT chr8:80864157-80864158 TT ENSMUSG00000031714.9 ENSMUST00000034150.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_80864158_-/TT chr8:80864157-80864158 TT ENSMUSG00000031714.9 ENSMUST00000210676.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81109018_TCTGTCTA/- chr8:81109018-81109025 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_81122310_C/T chr8:81122310 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_81254094_TT/-/TTT/TTTT chr8:81254094-81254095 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_81254094_TT/-/TTT/TTTT chr8:81254094-81254095 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_81254094_TT/-/TTT/TTTT chr8:81254094-81254095 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_81502362_AC/- chr8:81502362-81502363 - ENSMUSG00000037940.17 ENSMUST00000169387.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81502362_AC/- chr8:81502362-81502363 - ENSMUSG00000037940.17 ENSMUST00000172167.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81502362_AC/- chr8:81502362-81502363 - ENSMUSG00000037940.17 ENSMUST00000213285.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81502362_AC/- chr8:81502362-81502363 - ENSMUSG00000037940.17 ENSMUST00000215332.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81502362_AC/- chr8:81502362-81502363 - ENSMUSG00000037940.17 ENSMUST00000217122.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81700131_T/G chr8:81700131 G ENSMUSG00000037940.17 ENSMUST00000169387.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81700131_T/G chr8:81700131 G ENSMUSG00000037940.17 ENSMUST00000172167.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81700131_T/G chr8:81700131 G ENSMUSG00000037940.17 ENSMUST00000213285.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81700131_T/G chr8:81700131 G ENSMUSG00000037940.17 ENSMUST00000215332.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_81700131_T/G chr8:81700131 G ENSMUSG00000037940.17 ENSMUST00000217122.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82074727_TGTG/- chr8:82074727-82074730 - ENSMUSG00000037940.17 ENSMUST00000042529.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82074727_TGTG/- chr8:82074727-82074730 - ENSMUSG00000037940.17 ENSMUST00000109851.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82074727_TGTG/- chr8:82074727-82074730 - ENSMUSG00000037940.17 ENSMUST00000109852.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82074727_TGTG/- chr8:82074727-82074730 - ENSMUSG00000037940.17 ENSMUST00000169387.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82074727_TGTG/- chr8:82074727-82074730 - ENSMUSG00000037940.17 ENSMUST00000172031.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82074727_TGTG/- chr8:82074727-82074730 - ENSMUSG00000037940.17 ENSMUST00000215332.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82074727_TGTG/- chr8:82074727-82074730 - ENSMUSG00000037940.17 ENSMUST00000217122.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_82563391_ATAA/- chr8:82563391-82563394 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_82797202_ACAC/- chr8:82797202-82797205 - ENSMUSG00000109643.1 ENSMUST00000209358.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_83216091_TGTG/-/TG chr8:83216091-83216094 - ENSMUSG00000031709.15 ENSMUST00000034145.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_83216091_TGTG/-/TG chr8:83216091-83216094 TG ENSMUSG00000031709.15 ENSMUST00000034145.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_83216091_TGTG/-/TG chr8:83216091-83216094 - ENSMUSG00000031709.15 ENSMUST00000093393.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_83216091_TGTG/-/TG chr8:83216091-83216094 TG ENSMUSG00000031709.15 ENSMUST00000093393.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000003910.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2693;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000003910.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2693;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000054191.8 ENSMUST00000067060.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=573;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000054191.8 ENSMUST00000067060.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=573;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000109744.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2693;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000109744.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2693;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000128400.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2854;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000128400.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2854;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000134569.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2864;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000134569.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2864;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000135219.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3968;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000135219.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3968;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000145292.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2823;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000145292.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2823;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000153215.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2780;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000153215.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2780;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 - ENSMUSG00000003812.13 ENSMUST00000155942.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2780;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84905864_CTCT/-/CTCTCTCT chr8:84905864-84905867 CTCTCTCT ENSMUSG00000003812.13 ENSMUST00000155942.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2780;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949602_G/A chr8:84949602 A ENSMUSG00000048617.16 ENSMUST00000067472.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949602_G/A chr8:84949602 A ENSMUSG00000048617.16 ENSMUST00000109740.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949602_G/A chr8:84949602 A ENSMUSG00000048617.16 ENSMUST00000121880.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=258;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949602_G/A chr8:84949602 A ENSMUSG00000048617.16 ENSMUST00000152378.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1579;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949606_G/A chr8:84949606 A ENSMUSG00000048617.16 ENSMUST00000067472.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949606_G/A chr8:84949606 A ENSMUSG00000048617.16 ENSMUST00000109740.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949606_G/A chr8:84949606 A ENSMUSG00000048617.16 ENSMUST00000121880.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=254;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_84949606_G/A chr8:84949606 A ENSMUSG00000048617.16 ENSMUST00000152378.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1575;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85102962_CTTT/- chr8:85102962-85102965 - ENSMUSG00000005142.10 ENSMUST00000034121.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4680;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85191710_ACAC/- chr8:85191710-85191713 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031696.9 ENSMUST00000034131.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031697.12 ENSMUST00000034132.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4158;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031697.12 ENSMUST00000170141.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4056;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031696.9 ENSMUST00000209228.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031697.12 ENSMUST00000209733.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4194;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031697.12 ENSMUST00000210146.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4290;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031696.9 ENSMUST00000211154.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031697.12 ENSMUST00000211396.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3999;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031696.9 ENSMUST00000211479.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85295633_C/A chr8:85295633 A ENSMUSG00000031697.12 ENSMUST00000211597.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3999;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_85788255_A/G chr8:85788255 G ENSMUSG00000031703.8 ENSMUST00000034140.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_86518656_CACACA/- chr8:86518656-86518661 - ENSMUSG00000036872.16 ENSMUST00000080115.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_86518656_CACACA/- chr8:86518656-86518661 - ENSMUSG00000036872.16 ENSMUST00000129898.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_86518656_CACACA/- chr8:86518656-86518661 - ENSMUSG00000036872.16 ENSMUST00000131423.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_86518656_CACACA/- chr8:86518656-86518661 - ENSMUSG00000036872.16 ENSMUST00000131806.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_86518656_CACACA/- chr8:86518656-86518661 - ENSMUSG00000036872.16 ENSMUST00000156066.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_86518656_CACACA/- chr8:86518656-86518661 - ENSMUSG00000036872.16 ENSMUST00000156610.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_88092122_TGTG/- chr8:88092122-88092125 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_88208831_GTGT/- chr8:88208831-88208834 - ENSMUSG00000036779.12 ENSMUST00000066748.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_88208831_GTGT/- chr8:88208831-88208834 - ENSMUSG00000036779.12 ENSMUST00000118952.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_88208831_GTGT/- chr8:88208831-88208834 - ENSMUSG00000036779.12 ENSMUST00000119033.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_89788152_TT/- chr8:89788152-89788153 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_90570713_AA/-/AAA chr8:90570713-90570714 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_90570713_AA/-/AAA chr8:90570713-90570714 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_90672799_-/ACACACACACACACACACAC chr8:90672798-90672799 ACACACACACACACACACAC ENSMUSG00000109672.1 ENSMUST00000211205.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_90884045_TTT/-/TTTT chr8:90884045-90884047 - ENSMUSG00000056608.14 ENSMUST00000048665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_90884045_TTT/-/TTTT chr8:90884045-90884047 TTTT ENSMUSG00000056608.14 ENSMUST00000048665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_90884045_TTT/-/TTTT chr8:90884045-90884047 - ENSMUSG00000056608.14 ENSMUST00000109614.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_90884045_TTT/-/TTTT chr8:90884045-90884047 TTTT ENSMUSG00000056608.14 ENSMUST00000109614.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_90884045_TTT/-/TTTT chr8:90884045-90884047 - ENSMUSG00000056608.14 ENSMUST00000209474.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_90884045_TTT/-/TTTT chr8:90884045-90884047 TTTT ENSMUSG00000056608.14 ENSMUST00000209474.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_91468675_C/T chr8:91468675 T ENSMUSG00000055932.15 ENSMUST00000069718.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_91468675_C/T chr8:91468675 T ENSMUSG00000055932.15 ENSMUST00000128081.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_91468675_C/T chr8:91468675 T ENSMUSG00000055932.15 ENSMUST00000136802.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_91468675_C/T chr8:91468675 T ENSMUSG00000055932.15 ENSMUST00000140276.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_91468675_C/T chr8:91468675 T ENSMUSG00000055932.15 ENSMUST00000166548.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=284;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_91468675_C/T chr8:91468675 T ENSMUSG00000110138.1 ENSMUST00000211287.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92103429_-/ATTT chr8:92103428-92103429 ATTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_92818677_AGAG/- chr8:92818677-92818680 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_92831514_CACA/-/CA chr8:92831514-92831517 - ENSMUSG00000031740.8 ENSMUST00000034187.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92831514_CACA/-/CA chr8:92831514-92831517 CA ENSMUSG00000031740.8 ENSMUST00000034187.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92860066_AC/- chr8:92860066-92860067 - ENSMUSG00000033192.5 ENSMUST00000046290.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92860066_AC/- chr8:92860066-92860067 - ENSMUSG00000033192.5 ENSMUST00000130471.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92860066_AC/- chr8:92860066-92860067 - ENSMUSG00000033192.5 ENSMUST00000209265.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92860066_AC/- chr8:92860066-92860067 - ENSMUSG00000033192.5 ENSMUST00000210099.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92860066_AC/- chr8:92860066-92860067 - ENSMUSG00000109669.1 ENSMUST00000211295.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3732;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92982103_GTGT/- chr8:92982103-92982106 - ENSMUSG00000055368.14 ENSMUST00000072939.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_92982103_GTGT/- chr8:92982103-92982106 - ENSMUSG00000055368.14 ENSMUST00000165470.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_93587653_A/C chr8:93587653 C ENSMUSG00000110534.1 ENSMUST00000212785.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_93587657_T/C chr8:93587657 C ENSMUSG00000110534.1 ENSMUST00000212785.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_93739905_T/G chr8:93739905 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_93942463_ATTATT/- chr8:93942463-93942468 - ENSMUSG00000031748.16 ENSMUST00000034198.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_93942463_ATTATT/- chr8:93942463-93942468 - ENSMUSG00000031748.16 ENSMUST00000125716.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_93942463_ATTATT/- chr8:93942463-93942468 - ENSMUSG00000031748.16 ENSMUST00000127900.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_93942463_ATTATT/- chr8:93942463-93942468 - ENSMUSG00000031748.16 ENSMUST00000137202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_93942463_ATTATT/- chr8:93942463-93942468 - ENSMUSG00000031748.16 ENSMUST00000138659.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94016763_AA/- chr8:94016763-94016764 - ENSMUSG00000031754.10 ENSMUST00000034204.10 Transcript 3_prime_UTR_variant 3742-3743 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94016763_AA/- chr8:94016763-94016764 - ENSMUSG00000031751.14 ENSMUST00000053766.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3921;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94016763_AA/- chr8:94016763-94016764 - ENSMUSG00000031751.14 ENSMUST00000143265.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4636;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94016763_AA/- chr8:94016763-94016764 - ENSMUSG00000031754.10 ENSMUST00000212622.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2641;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94016763_AA/- chr8:94016763-94016764 - ENSMUSG00000031754.10 ENSMUST00000212981.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2684;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94173732_GTGT/-/GT chr8:94173732-94173735 - ENSMUSG00000031762.7 ENSMUST00000034214.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=164;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94173732_GTGT/-/GT chr8:94173732-94173735 GT ENSMUSG00000031762.7 ENSMUST00000034214.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=164;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94173732_GTGT/-/GT chr8:94173732-94173735 - ENSMUSG00000110588.1 ENSMUST00000211992.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=320;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94173732_GTGT/-/GT chr8:94173732-94173735 GT ENSMUSG00000110588.1 ENSMUST00000211992.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=320;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94173732_GTGT/-/GT chr8:94173732-94173735 - ENSMUSG00000031762.7 ENSMUST00000212806.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=168;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94173732_GTGT/-/GT chr8:94173732-94173735 GT ENSMUSG00000031762.7 ENSMUST00000212806.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=168;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_94191082_A/C chr8:94191082 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_95037634_GTGT/-/GT chr8:95037634-95037637 - ENSMUSG00000060470.7 ENSMUST00000051259.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95037634_GTGT/-/GT chr8:95037634-95037637 GT ENSMUSG00000060470.7 ENSMUST00000051259.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95037634_GTGT/-/GT chr8:95037634-95037637 - ENSMUSG00000060470.7 ENSMUST00000211974.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95037634_GTGT/-/GT chr8:95037634-95037637 GT ENSMUSG00000060470.7 ENSMUST00000211974.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95037634_GTGT/-/GT chr8:95037634-95037637 - ENSMUSG00000060470.7 ENSMUST00000211994.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1770;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95037634_GTGT/-/GT chr8:95037634-95037637 GT ENSMUSG00000060470.7 ENSMUST00000211994.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1770;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95037634_GTGT/-/GT chr8:95037634-95037637 - ENSMUSG00000060470.7 ENSMUST00000212570.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95037634_GTGT/-/GT chr8:95037634-95037637 GT ENSMUSG00000060470.7 ENSMUST00000212570.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95069061_GTGTGT/-/GT chr8:95069061-95069066 - ENSMUSG00000031786.7 ENSMUST00000058479.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_95069061_GTGTGT/-/GT chr8:95069061-95069066 GT ENSMUSG00000031786.7 ENSMUST00000058479.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_96193312_-/TTTTTTTTTTTT chr8:96193311-96193312 TTTTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_96773973_C/A chr8:96773973 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_97239338_A/C chr8:97239338 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_97594251_T/- chr8:97594251 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_97794544_A/- chr8:97794544 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_98239777_TATA/- chr8:98239777-98239780 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_98308167_C/G chr8:98308167 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_98308179_C/T chr8:98308179 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_99128970_-/C chr8:99128969-99128970 C ENSMUSG00000036510.17 ENSMUST00000093249.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128970_-/C chr8:99128969-99128970 C ENSMUSG00000036510.17 ENSMUST00000128860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128970_-/C chr8:99128969-99128970 C ENSMUSG00000036510.17 ENSMUST00000142129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128970_-/C chr8:99128969-99128970 C ENSMUSG00000036510.17 ENSMUST00000145601.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128970_-/C chr8:99128969-99128970 C ENSMUSG00000036510.17 ENSMUST00000155527.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128975_T/C chr8:99128975 C ENSMUSG00000036510.17 ENSMUST00000093249.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128975_T/C chr8:99128975 C ENSMUSG00000036510.17 ENSMUST00000128860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128975_T/C chr8:99128975 C ENSMUSG00000036510.17 ENSMUST00000142129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128975_T/C chr8:99128975 C ENSMUSG00000036510.17 ENSMUST00000145601.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99128975_T/C chr8:99128975 C ENSMUSG00000036510.17 ENSMUST00000155527.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99490997_AA/-/AAA chr8:99490997-99490998 - ENSMUSG00000052479.5 ENSMUST00000153366.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99490997_AA/-/AAA chr8:99490997-99490998 AAA ENSMUSG00000052479.5 ENSMUST00000153366.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99490997_AA/-/AAA chr8:99490997-99490998 - ENSMUSG00000090116.1 ENSMUST00000161597.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99490997_AA/-/AAA chr8:99490997-99490998 AAA ENSMUSG00000090116.1 ENSMUST00000161597.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_99802940_-/AA chr8:99802939-99802940 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_100324055_-/TTTTTT chr8:100324054-100324055 TTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_100685163_TT/-/TTT chr8:100685163-100685164 - ENSMUSG00000109769.1 ENSMUST00000210760.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_100685163_TT/-/TTT chr8:100685163-100685164 TTT ENSMUSG00000109769.1 ENSMUST00000210760.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_100768811_GTGT/-/GT chr8:100768811-100768814 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_100768811_GTGT/-/GT chr8:100768811-100768814 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_101881641_G/T chr8:101881641 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_103524305_G/T chr8:103524305 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000031878.18 ENSMUST00000034349.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000052616.10 ENSMUST00000064576.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1588;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000077633.1 ENSMUST00000104445.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3467;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000031878.18 ENSMUST00000159330.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000052616.10 ENSMUST00000159713.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000031878.18 ENSMUST00000160148.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1724;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000031878.18 ENSMUST00000161411.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000031878.18 ENSMUST00000161462.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000052616.10 ENSMUST00000161520.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1592;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000052616.10 ENSMUST00000162014.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1565;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104511475_AA/- chr8:104511475-104511476 - ENSMUSG00000031878.18 ENSMUST00000162466.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104564686_AGAG/- chr8:104564686-104564689 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_104718124_-/TCT chr8:104718123-104718124 TCT ENSMUSG00000110557.1 ENSMUST00000212733.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_104718124_-/TCT chr8:104718123-104718124 TCT ENSMUSG00000110497.1 ENSMUST00000212907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105059379_CACACA/- chr8:105059379-105059384 - ENSMUSG00000069922.12 ENSMUST00000093222.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=966;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105059379_CACACA/- chr8:105059379-105059384 - ENSMUSG00000069922.12 ENSMUST00000093223.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=966;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105059379_CACACA/- chr8:105059379-105059384 - ENSMUSG00000069922.12 ENSMUST00000212481.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2373;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105065267_AA/-/A chr8:105065267-105065268 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_105065267_AA/-/A chr8:105065267-105065268 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_105235877_A/T chr8:105235877 T ENSMUSG00000031889.9 ENSMUST00000034361.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105235877_A/T chr8:105235877 T ENSMUSG00000031889.9 ENSMUST00000124113.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105235877_A/T chr8:105235877 T ENSMUSG00000031889.9 ENSMUST00000132964.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105235877_A/T chr8:105235877 T ENSMUSG00000031889.9 ENSMUST00000141957.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105235877_A/T chr8:105235877 T ENSMUSG00000031889.9 ENSMUST00000156561.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105320666_C/T chr8:105320666 T ENSMUSG00000041679.9 ENSMUST00000070508.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105320666_C/T chr8:105320666 T ENSMUSG00000041679.9 ENSMUST00000209964.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105320666_C/T chr8:105320666 T ENSMUSG00000041679.9 ENSMUST00000210412.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105320666_C/T chr8:105320666 T ENSMUSG00000041679.9 ENSMUST00000210801.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105320666_C/T chr8:105320666 T ENSMUSG00000041679.9 ENSMUST00000211199.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105999944_A/- chr8:105999944 - ENSMUSG00000115067.1 ENSMUST00000081998.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3521;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105999944_A/- chr8:105999944 - ENSMUSG00000031901.12 ENSMUST00000142898.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105999944_A/- chr8:105999944 - ENSMUSG00000115067.1 ENSMUST00000227363.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3550;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_105999944_A/- chr8:105999944 - ENSMUSG00000115768.1 ENSMUST00000227778.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106095253_-/TATC chr8:106095252-106095253 TATC ENSMUSG00000031902.10 ENSMUST00000109308.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106095253_-/TATC chr8:106095252-106095253 TATC ENSMUSG00000031902.10 ENSMUST00000211991.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106095253_-/TATC chr8:106095252-106095253 TATC ENSMUSG00000031902.10 ENSMUST00000212577.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2676;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106095253_-/TATC chr8:106095252-106095253 TATC ENSMUSG00000031902.10 ENSMUST00000212671.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3512;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106095253_-/TATC chr8:106095252-106095253 TATC ENSMUSG00000031902.10 ENSMUST00000212691.1 Transcript non_coding_transcript_exon_variant 78-79 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106095253_-/TATC chr8:106095252-106095253 TATC ENSMUSG00000031902.10 ENSMUST00000212742.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106095253_-/TATC chr8:106095252-106095253 TATC ENSMUSG00000031902.10 ENSMUST00000212936.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2676;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 - ENSMUSG00000060098.11 ENSMUST00000071592.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 A ENSMUSG00000060098.11 ENSMUST00000071592.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 - ENSMUSG00000060098.11 ENSMUST00000109296.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3701;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 A ENSMUSG00000060098.11 ENSMUST00000109296.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3701;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 - ENSMUSG00000060098.11 ENSMUST00000109297.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 A ENSMUSG00000060098.11 ENSMUST00000109297.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 - ENSMUSG00000060098.11 ENSMUST00000128201.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 A ENSMUSG00000060098.11 ENSMUST00000128201.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 - ENSMUSG00000060098.11 ENSMUST00000147063.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 A ENSMUSG00000060098.11 ENSMUST00000147063.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 - ENSMUSG00000060098.11 ENSMUST00000153272.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3554;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106230970_AA/-/A chr8:106230970-106230971 A ENSMUSG00000060098.11 ENSMUST00000153272.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3554;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106507589_ACAC/-/AC chr8:106507589-106507592 - ENSMUSG00000054069.7 ENSMUST00000066875.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=247;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106507589_ACAC/-/AC chr8:106507589-106507592 AC ENSMUSG00000054069.7 ENSMUST00000066875.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=247;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106507589_ACAC/-/AC chr8:106507589-106507592 - ENSMUSG00000061048.8 ENSMUST00000080797.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3299;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106507589_ACAC/-/AC chr8:106507589-106507592 AC ENSMUSG00000061048.8 ENSMUST00000080797.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3299;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106620961_-/GTGTGTGTGTGTGTGTGTGTGTGTGT chr8:106620960-106620961 GTGTGTGTGTGTGTGTGTGTGTGTGT ENSMUSG00000000303.12 ENSMUST00000000312.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106620961_-/GTGTGTGTGTGTGTGTGTGTGTGTGT chr8:106620960-106620961 GTGTGTGTGTGTGTGTGTGTGTGTGT ENSMUSG00000000303.12 ENSMUST00000136580.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_106620961_-/GTGTGTGTGTGTGTGTGTGTGTGTGT chr8:106620960-106620961 GTGTGTGTGTGTGTGTGTGTGTGTGT ENSMUSG00000000303.12 ENSMUST00000167688.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107128722_GAA/- chr8:107128722-107128724 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000075922.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000077440.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4070;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000125721.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000126397.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3771;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000133026.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000144100.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4176;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000148006.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3771;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000151114.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000154474.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_107334737_A/T chr8:107334737 T ENSMUSG00000003847.16 ENSMUST00000169453.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108644036_GTGT/- chr8:108644036-108644039 - ENSMUSG00000038872.10 ENSMUST00000220518.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108644036_GTGT/- chr8:108644036-108644039 - ENSMUSG00000038872.10 ENSMUST00000221100.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108644036_GTGT/- chr8:108644036-108644039 - ENSMUSG00000038872.10 ENSMUST00000221237.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108793795_C/T chr8:108793795 T ENSMUSG00000038872.10 ENSMUST00000043896.9 Transcript synonymous_variant 2281 1548 516 P ccC/ccT - IMPACT=LOW;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108793795_C/T chr8:108793795 T ENSMUSG00000038872.10 ENSMUST00000188994.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108793795_C/T chr8:108793795 T ENSMUSG00000038872.10 ENSMUST00000220518.1 Transcript synonymous_variant 3000 1548 516 P ccC/ccT - IMPACT=LOW;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108912750_-/T chr8:108912749-108912750 T ENSMUSG00000038872.10 ENSMUST00000043896.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_108912750_-/T chr8:108912749-108912750 T ENSMUSG00000038872.10 ENSMUST00000220518.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109032713_CTCTCT/- chr8:109032713-109032718 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000123605.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000125779.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000128350.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1991;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000131107.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=19;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000133353.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000143900.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000146064.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=6;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109601310_TTT/- chr8:109601310-109601312 - ENSMUSG00000031730.18 ENSMUST00000150804.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109815965_C/A chr8:109815965 A ENSMUSG00000031731.16 ENSMUST00000034171.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_109815965_C/A chr8:109815965 A ENSMUSG00000031731.16 ENSMUST00000093157.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110177208_GTGT/- chr8:110177208-110177211 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_110427323_ATATAT/- chr8:110427323-110427328 - ENSMUSG00000059854.8 ENSMUST00000043141.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110427323_ATATAT/- chr8:110427323-110427328 - ENSMUSG00000059854.8 ENSMUST00000212218.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110485026_CACACA/- chr8:110485026-110485031 - ENSMUSG00000059854.8 ENSMUST00000043141.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110485026_CACACA/- chr8:110485026-110485031 - ENSMUSG00000059854.8 ENSMUST00000212218.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110681684_-/T chr8:110681683-110681684 T ENSMUSG00000010936.11 ENSMUST00000034190.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110681684_-/T chr8:110681683-110681684 T ENSMUSG00000010936.11 ENSMUST00000212663.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110681684_-/T chr8:110681683-110681684 T ENSMUSG00000010936.11 ENSMUST00000212766.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110681684_-/T chr8:110681683-110681684 T ENSMUSG00000010936.11 ENSMUST00000212829.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110681684_-/T chr8:110681683-110681684 T ENSMUSG00000010936.11 ENSMUST00000213003.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_110681684_-/T chr8:110681683-110681684 T ENSMUSG00000010936.11 ENSMUST00000213015.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_111957732_-/AA chr8:111957731-111957732 AA ENSMUSG00000031950.7 ENSMUST00000034428.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4119;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_111957732_-/AA chr8:111957731-111957732 AA ENSMUSG00000031950.7 ENSMUST00000133628.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4989;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_112365486_ACAC/- chr8:112365486-112365489 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_113368434_C/A chr8:113368434 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_113668677_GAA/G/AAA chr8:113668677-113668679 G ENSMUSG00000110582.1 ENSMUST00000211951.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_113668677_GAA/G/AAA chr8:113668677-113668679 AAA ENSMUSG00000110582.1 ENSMUST00000211951.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114620212_-/TCTA chr8:114620211-114620212 TCTA ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114620212_-/TCTA chr8:114620211-114620212 TCTA ENSMUSG00000004637.15 ENSMUST00000109108.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114620212_-/TCTA chr8:114620211-114620212 TCTA ENSMUSG00000004637.15 ENSMUST00000160205.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114620212_-/TCTA chr8:114620211-114620212 TCTA ENSMUSG00000004637.15 ENSMUST00000160862.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114770732_C/A chr8:114770732 A ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114770732_C/A chr8:114770732 A ENSMUSG00000004637.15 ENSMUST00000109108.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114770732_C/A chr8:114770732 A ENSMUSG00000004637.15 ENSMUST00000159870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114770732_C/A chr8:114770732 A ENSMUSG00000004637.15 ENSMUST00000162052.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 - ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 TTT ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 - ENSMUSG00000004637.15 ENSMUST00000109108.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 TTT ENSMUSG00000004637.15 ENSMUST00000109108.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 - ENSMUSG00000004637.15 ENSMUST00000159870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 TTT ENSMUSG00000004637.15 ENSMUST00000159870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 - ENSMUSG00000004637.15 ENSMUST00000162052.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114807704_TTTTT/-/TTT chr8:114807704-114807708 TTT ENSMUSG00000004637.15 ENSMUST00000162052.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114842021_-/TTCT chr8:114842020-114842021 TTCT ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114842021_-/TTCT chr8:114842020-114842021 TTCT ENSMUSG00000004637.15 ENSMUST00000109108.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114842021_-/TTCT chr8:114842020-114842021 TTCT ENSMUSG00000004637.15 ENSMUST00000159870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_114842021_-/TTCT chr8:114842020-114842021 TTCT ENSMUSG00000004637.15 ENSMUST00000162052.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115110905_-/TTTTTT chr8:115110904-115110905 TTTTTT ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115110905_-/TTTTTT chr8:115110904-115110905 TTTTTT ENSMUSG00000004637.15 ENSMUST00000162052.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115215194_G/T chr8:115215194 T ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115215194_G/T chr8:115215194 T ENSMUSG00000004637.15 ENSMUST00000162052.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115234522_CT/- chr8:115234522-115234523 - ENSMUSG00000004637.15 ENSMUST00000004756.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115234522_CT/- chr8:115234522-115234523 - ENSMUSG00000004637.15 ENSMUST00000162052.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115473424_-/ATCT chr8:115473423-115473424 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_115708498_TT/- chr8:115708498-115708499 - ENSMUSG00000055435.6 ENSMUST00000069009.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1402;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115708498_TT/- chr8:115708498-115708499 - ENSMUSG00000055435.6 ENSMUST00000109104.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=704;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_115708498_TT/- chr8:115708498-115708499 - ENSMUSG00000086717.1 ENSMUST00000134649.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1265;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_116199133_TT/- chr8:116199133-116199134 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_116265101_GAGA/- chr8:116265101-116265104 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_116366174_TG/- chr8:116366174-116366175 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_116588325_AA/- chr8:116588325-116588326 - ENSMUSG00000031758.10 ENSMUST00000109102.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_116762594_CC/- chr8:116762594-116762595 - ENSMUSG00000074072.2 ENSMUST00000098379.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1549;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_117234260_TG/CA chr8:117234260-117234261 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_117508518_TGTG/- chr8:117508518-117508521 - ENSMUSG00000034330.10 ENSMUST00000081232.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_117595146_-/TTTTTTTTTTTTTTT chr8:117595145-117595146 TTTTTTTTTTTTTTT ENSMUSG00000034330.10 ENSMUST00000081232.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_117978478_TG/CA chr8:117978478-117978479 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_118200556_GTGT/-/GT chr8:118200556-118200559 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_118200556_GTGT/-/GT chr8:118200556-118200559 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_118926348_CTCT/-/CT chr8:118926348-118926351 - ENSMUSG00000031841.19 ENSMUST00000117160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118926348_CTCT/-/CT chr8:118926348-118926351 CT ENSMUSG00000031841.19 ENSMUST00000117160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118926348_CTCT/-/CT chr8:118926348-118926351 - ENSMUSG00000031841.19 ENSMUST00000142551.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118926348_CTCT/-/CT chr8:118926348-118926351 CT ENSMUSG00000031841.19 ENSMUST00000142551.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118926348_CTCT/-/CT chr8:118926348-118926351 - ENSMUSG00000031841.19 ENSMUST00000148836.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118926348_CTCT/-/CT chr8:118926348-118926351 CT ENSMUSG00000031841.19 ENSMUST00000148836.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118998758_ATAT/-/AT chr8:118998758-118998761 - ENSMUSG00000031841.19 ENSMUST00000117160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118998758_ATAT/-/AT chr8:118998758-118998761 AT ENSMUSG00000031841.19 ENSMUST00000117160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118998758_ATAT/-/AT chr8:118998758-118998761 - ENSMUSG00000031841.19 ENSMUST00000148836.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_118998758_ATAT/-/AT chr8:118998758-118998761 AT ENSMUSG00000031841.19 ENSMUST00000148836.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_119283577_-/GATA chr8:119283576-119283577 GATA ENSMUSG00000031841.19 ENSMUST00000117160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_119283577_-/GATA chr8:119283576-119283577 GATA ENSMUSG00000031841.19 ENSMUST00000151842.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_119380222_C/T chr8:119380222 T ENSMUSG00000110470.1 ENSMUST00000212135.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_119610407_GAGAGA/- chr8:119610407-119610412 - ENSMUSG00000024266.8 ENSMUST00000098361.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2335;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_119657166_TTTTT/- chr8:119657166-119657170 - ENSMUSG00000110453.1 ENSMUST00000212465.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2305;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121132457_C/T chr8:121132457 T ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121132457_C/T chr8:121132457 T ENSMUSG00000097084.1 ENSMUST00000181609.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1813;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121289641_AGAG/-/AG chr8:121289641-121289644 - ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121289641_AGAG/-/AG chr8:121289641-121289644 AG ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121289641_AGAG/-/AG chr8:121289641-121289644 - ENSMUSG00000097384.1 ENSMUST00000181200.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121289641_AGAG/-/AG chr8:121289641-121289644 AG ENSMUSG00000097384.1 ENSMUST00000181200.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121353992_A/G chr8:121353992 G ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121353992_A/G chr8:121353992 G ENSMUSG00000097384.1 ENSMUST00000181200.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121860964_TT/- chr8:121860964-121860965 - ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121860964_TT/- chr8:121860964-121860965 - ENSMUSG00000097812.1 ENSMUST00000181647.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=639;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121860964_TT/- chr8:121860964-121860965 - ENSMUSG00000097812.1 ENSMUST00000181776.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=343;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121860964_TT/- chr8:121860964-121860965 - ENSMUSG00000098109.1 ENSMUST00000182121.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3361;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121943570_GTGT/- chr8:121943570-121943573 - ENSMUSG00000025317.7 ENSMUST00000057653.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121943570_GTGT/- chr8:121943570-121943573 - ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_121943570_GTGT/- chr8:121943570-121943573 - ENSMUSG00000103904.1 ENSMUST00000195830.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3477;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122695009_TC/- chr8:122695009-122695010 - ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122695009_TC/- chr8:122695009-122695010 - ENSMUSG00000006362.16 ENSMUST00000127984.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122695009_TC/- chr8:122695009-122695010 - ENSMUSG00000006362.16 ENSMUST00000148630.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122695009_TC/- chr8:122695009-122695010 - ENSMUSG00000090174.1 ENSMUST00000162198.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2850;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122876281_-/CTTT chr8:122876280-122876281 CTTT ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122876281_-/CTTT chr8:122876280-122876281 CTTT ENSMUSG00000110440.1 ENSMUST00000211940.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122876281_-/CTTT chr8:122876280-122876281 CTTT ENSMUSG00000110440.1 ENSMUST00000212728.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122955127_G/A chr8:122955127 A ENSMUSG00000035569.17 ENSMUST00000098334.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122955127_G/A chr8:122955127 A ENSMUSG00000092329.1 ENSMUST00000127664.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122955127_G/A chr8:122955127 A ENSMUSG00000035569.17 ENSMUST00000172906.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122955127_G/A chr8:122955127 A ENSMUSG00000035569.17 ENSMUST00000174833.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_122955127_G/A chr8:122955127 A ENSMUSG00000035569.17 ENSMUST00000212937.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_124475100_ACAC/- chr8:124475100-124475103 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_125325051_GTGT/- chr8:125325051-125325054 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_125609774_GTGT/- chr8:125609774-125609777 - ENSMUSG00000110629.1 ENSMUST00000212260.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_125609774_GTGT/- chr8:125609774-125609777 - ENSMUSG00000110629.1 ENSMUST00000213085.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_126672198_AC/- chr8:126672198-126672199 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_126891006_CA/TG chr8:126891006-126891007 TG ENSMUSG00000110697.1 ENSMUST00000212639.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000026921.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000079777.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000159141.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000159537.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000159818.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000160272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000160581.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000160593.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000160766.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000161277.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000161355.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000162309.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000162531.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000162536.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000162602.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000162665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127179017_TT/- chr8:127179017-127179018 - ENSMUSG00000025812.17 ENSMUST00000162907.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000026921.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000026921.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000159511.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000159511.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000160272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000160272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000160766.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000160766.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000162309.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000162309.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000162531.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000162531.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000162536.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000162536.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000162665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000162665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 - ENSMUSG00000025812.17 ENSMUST00000163002.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127450894_GTGT/-/GT chr8:127450894-127450897 GT ENSMUSG00000025812.17 ENSMUST00000163002.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127585984_A/C chr8:127585984 C ENSMUSG00000025812.17 ENSMUST00000026921.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127585984_A/C chr8:127585984 C ENSMUSG00000025812.17 ENSMUST00000159940.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127585984_A/C chr8:127585984 C ENSMUSG00000025812.17 ENSMUST00000160272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127585984_A/C chr8:127585984 C ENSMUSG00000025812.17 ENSMUST00000160766.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127585984_A/C chr8:127585984 C ENSMUSG00000025812.17 ENSMUST00000162309.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127585984_A/C chr8:127585984 C ENSMUSG00000025812.17 ENSMUST00000162536.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127585984_A/C chr8:127585984 C ENSMUSG00000025812.17 ENSMUST00000162665.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_127760501_TGTG/- chr8:127760501-127760504 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_127989779_TCTC/-/TC chr8:127989779-127989782 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_127989779_TCTC/-/TC chr8:127989779-127989782 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_128406494_GTGT/- chr8:128406494-128406497 - ENSMUSG00000025810.9 ENSMUST00000026917.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_128406494_GTGT/- chr8:128406494-128406497 - ENSMUSG00000025810.9 ENSMUST00000212746.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_128406494_GTGT/- chr8:128406494-128406497 - ENSMUSG00000025810.9 ENSMUST00000212933.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_128447164_GTGT/-/GT chr8:128447164-128447167 - ENSMUSG00000025810.9 ENSMUST00000026917.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_128447164_GTGT/-/GT chr8:128447164-128447167 GT ENSMUSG00000025810.9 ENSMUST00000026917.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_128447164_GTGT/-/GT chr8:128447164-128447167 - ENSMUSG00000025810.9 ENSMUST00000212933.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_128447164_GTGT/-/GT chr8:128447164-128447167 GT ENSMUSG00000025810.9 ENSMUST00000212933.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr8_128563480_AA/- chr8:128563480-128563481 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr8_128856829_TATC/- chr8:128856829-128856832 - ENSMUSG00000025808.17 ENSMUST00000214889.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016655_C/- chr9:3016655 - ENSMUSG00000095547.1 ENSMUST00000099047.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3500;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016655_C/- chr9:3016655 - ENSMUSG00000095547.1 ENSMUST00000099049.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=753;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016655_C/- chr9:3016655 - ENSMUSG00000074564.3 ENSMUST00000099050.3 Transcript frameshift_variant 355 355 119 L/X Ctc/tc - IMPACT=HIGH;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016655_C/- chr9:3016655 - ENSMUSG00000096519.1 ENSMUST00000143083.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2311;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016655_C/- chr9:3016655 - ENSMUSG00000095547.1 ENSMUST00000179272.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2098;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016655_C/- chr9:3016655 - ENSMUSG00000097312.1 ENSMUST00000181242.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016655_C/- chr9:3016655 - ENSMUSG00000097312.1 ENSMUST00000181572.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016664_A/C chr9:3016664 C ENSMUSG00000095547.1 ENSMUST00000099047.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3491;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016664_A/C chr9:3016664 C ENSMUSG00000095547.1 ENSMUST00000099049.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=744;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016664_A/C chr9:3016664 C ENSMUSG00000074564.3 ENSMUST00000099050.3 Transcript missense_variant 364 364 122 S/R Agt/Cgt - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016664_A/C chr9:3016664 C ENSMUSG00000096519.1 ENSMUST00000143083.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2320;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016664_A/C chr9:3016664 C ENSMUSG00000095547.1 ENSMUST00000179272.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2089;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016664_A/C chr9:3016664 C ENSMUSG00000097312.1 ENSMUST00000181242.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3016664_A/C chr9:3016664 C ENSMUSG00000097312.1 ENSMUST00000181572.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1211;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095891.7 ENSMUST00000075573.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=249;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095891.7 ENSMUST00000099042.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3701;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095186.1 ENSMUST00000099046.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1418;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095891.7 ENSMUST00000099051.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2559;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095891.7 ENSMUST00000177601.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095891.7 ENSMUST00000177875.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=887;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095891.7 ENSMUST00000179264.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3932;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000095891.7 ENSMUST00000179982.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=887;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000097312.1 ENSMUST00000181572.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3026636_C/T chr9:3026636 T ENSMUSG00000097312.1 ENSMUST00000181957.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000095891.7 ENSMUST00000099042.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4236;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000095891.7 ENSMUST00000099051.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4236;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000095891.7 ENSMUST00000099056.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2485;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000096201.1 ENSMUST00000155807.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1570;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000096201.1 ENSMUST00000177969.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1804;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000096736.1 ENSMUST00000178641.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000095891.7 ENSMUST00000179264.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2719;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000095891.7 ENSMUST00000179839.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2018;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000097312.1 ENSMUST00000181572.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000097312.1 ENSMUST00000181957.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3035307_C/T chr9:3035307 T ENSMUSG00000106183.1 ENSMUST00000195989.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3362;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3175551_A/T chr9:3175551 T ENSMUSG00000042360.12 ENSMUST00000048921.12 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3641235_TT/- chr9:3641235-3641236 - ENSMUSG00000041624.10 ENSMUST00000115733.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3641235_TT/- chr9:3641235-3641236 - ENSMUSG00000041624.10 ENSMUST00000213060.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_3888032_C/A chr9:3888032 A ENSMUSG00000041624.10 ENSMUST00000115733.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4040016_CACACA/-/CACA chr9:4040016-4040021 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_4040016_CACACA/-/CACA chr9:4040016-4040021 CACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_4251054_G/T chr9:4251054 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 - ENSMUSG00000025892.16 ENSMUST00000027020.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 GTGTGT ENSMUSG00000025892.16 ENSMUST00000027020.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 - ENSMUSG00000025892.16 ENSMUST00000063508.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 GTGTGT ENSMUSG00000025892.16 ENSMUST00000063508.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 - ENSMUSG00000025892.16 ENSMUST00000163309.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 GTGTGT ENSMUSG00000025892.16 ENSMUST00000163309.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 - ENSMUSG00000025892.16 ENSMUST00000212533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4665871_GTGT/-/GTGTGT chr9:4665871-4665874 GTGTGT ENSMUSG00000025892.16 ENSMUST00000212533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 - ENSMUSG00000025892.16 ENSMUST00000027020.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 AT ENSMUSG00000025892.16 ENSMUST00000027020.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 - ENSMUSG00000025892.16 ENSMUST00000063508.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 AT ENSMUSG00000025892.16 ENSMUST00000063508.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 - ENSMUSG00000025892.16 ENSMUST00000163309.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 AT ENSMUSG00000025892.16 ENSMUST00000163309.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 - ENSMUSG00000025892.16 ENSMUST00000212533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_4688613_ATAT/-/AT chr9:4688613-4688616 AT ENSMUSG00000025892.16 ENSMUST00000212533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_5468685_CTCT/- chr9:5468685-5468688 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_5835793_TT/-/T chr9:5835793-5835794 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_5835793_TT/-/T chr9:5835793-5835794 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_5988841_AA/-/AAA chr9:5988841-5988842 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_5988841_AA/-/AAA chr9:5988841-5988842 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_6442552_A/C chr9:6442552 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_6711064_T/A chr9:6711064 A ENSMUSG00000065382.1 ENSMUST00000083448.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4618;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAA ENSMUSG00000047193.16 ENSMUST00000048417.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAAGAAA ENSMUSG00000047193.16 ENSMUST00000048417.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAA ENSMUSG00000047193.16 ENSMUST00000139671.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAAGAAA ENSMUSG00000047193.16 ENSMUST00000139671.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAA ENSMUSG00000047193.16 ENSMUST00000140466.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAAGAAA ENSMUSG00000047193.16 ENSMUST00000140466.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAA ENSMUSG00000047193.16 ENSMUST00000147193.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7074497_-/GAAA/GAAAGAAA chr9:7074496-7074497 GAAAGAAA ENSMUSG00000047193.16 ENSMUST00000147193.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7103202_AA/- chr9:7103202-7103203 - ENSMUSG00000047193.16 ENSMUST00000048417.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7103202_AA/- chr9:7103202-7103203 - ENSMUSG00000047193.16 ENSMUST00000139671.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7103202_AA/- chr9:7103202-7103203 - ENSMUSG00000047193.16 ENSMUST00000140466.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7103202_AA/- chr9:7103202-7103203 - ENSMUSG00000047193.16 ENSMUST00000147193.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7103202_AA/- chr9:7103202-7103203 - ENSMUSG00000047193.16 ENSMUST00000214191.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7103202_AA/- chr9:7103202-7103203 - ENSMUSG00000047193.16 ENSMUST00000216097.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7300717_G/A chr9:7300717 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_7797298_GATA/- chr9:7797298-7797301 - ENSMUSG00000050912.15 ENSMUST00000052865.15 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2965;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7797298_GATA/- chr9:7797298-7797301 - ENSMUSG00000050912.15 ENSMUST00000154371.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2970;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7809861_T/C chr9:7809861 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_7877211_-/GT chr9:7877210-7877211 GT ENSMUSG00000032000.17 ENSMUST00000013949.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4186;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7877211_-/GT chr9:7877210-7877211 GT ENSMUSG00000032000.17 ENSMUST00000115672.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4227;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7877211_-/GT chr9:7877210-7877211 GT ENSMUSG00000032000.17 ENSMUST00000115673.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4024;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7877211_-/GT chr9:7877210-7877211 GT ENSMUSG00000032000.17 ENSMUST00000159323.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4040;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7877211_-/GT chr9:7877210-7877211 GT ENSMUSG00000032000.17 ENSMUST00000159672.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4313;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_7877211_-/GT chr9:7877210-7877211 GT ENSMUSG00000032000.17 ENSMUST00000161099.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4353;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_8369939_CCC/- chr9:8369939-8369941 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_8479305_C/T chr9:8479305 T ENSMUSG00000110828.1 ENSMUST00000216605.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2818;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_8822264_AAA/- chr9:8822264-8822266 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_9327148_G/T chr9:9327148 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_9545234_A/C chr9:9545234 C ENSMUSG00000111061.1 ENSMUST00000217005.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_10508766_-/TTCTC chr9:10508765-10508766 TTCTC ENSMUSG00000039488.15 ENSMUST00000160216.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_10508766_-/TTCTC chr9:10508765-10508766 TTCTC ENSMUSG00000039488.15 ENSMUST00000162484.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_11417229_G/A chr9:11417229 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_11893684_CTCT/- chr9:11893684-11893687 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_12025071_G/A chr9:12025071 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_12128282_C/T chr9:12128282 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_12470217_C/T chr9:12470217 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_12801062_TT/- chr9:12801062-12801063 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_12811517_AGAA/- chr9:12811517-12811520 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_13067900_A/T chr9:13067900 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_13444315_-/TG chr9:13444314-13444315 TG ENSMUSG00000031925.17 ENSMUST00000159294.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_13444315_-/TG chr9:13444314-13444315 TG ENSMUSG00000090592.2 ENSMUST00000167906.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_13455179_-/GTGT chr9:13455178-13455179 GTGT ENSMUSG00000031925.17 ENSMUST00000159294.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14234549_-/A chr9:14234548-14234549 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_14592528_ACAC/-/AC chr9:14592528-14592531 - ENSMUSG00000013076.17 ENSMUST00000013220.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 AC ENSMUSG00000013076.17 ENSMUST00000013220.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 - ENSMUSG00000013076.17 ENSMUST00000160770.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 AC ENSMUSG00000013076.17 ENSMUST00000160770.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 - ENSMUSG00000013076.17 ENSMUST00000162802.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=947;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 AC ENSMUSG00000013076.17 ENSMUST00000162802.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=947;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 - ENSMUSG00000013076.17 ENSMUST00000162901.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=913;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 AC ENSMUSG00000013076.17 ENSMUST00000162901.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=913;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 - ENSMUSG00000013076.17 ENSMUST00000223132.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14592528_ACAC/-/AC chr9:14592528-14592531 AC ENSMUSG00000013076.17 ENSMUST00000223132.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14604067_AA/- chr9:14604067-14604068 - ENSMUSG00000013076.17 ENSMUST00000013220.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14604067_AA/- chr9:14604067-14604068 - ENSMUSG00000013076.17 ENSMUST00000160770.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14604067_AA/- chr9:14604067-14604068 - ENSMUSG00000013076.17 ENSMUST00000162802.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14604067_AA/- chr9:14604067-14604068 - ENSMUSG00000013076.17 ENSMUST00000162901.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14604067_AA/- chr9:14604067-14604068 - ENSMUSG00000013076.17 ENSMUST00000223132.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14839954_CTCT/- chr9:14839954-14839957 - ENSMUSG00000031928.15 ENSMUST00000115632.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2831;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14899835_ACAC/- chr9:14899835-14899838 - ENSMUSG00000031933.17 ENSMUST00000034409.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=185;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14899835_ACAC/- chr9:14899835-14899838 - ENSMUSG00000031933.17 ENSMUST00000069408.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14899835_ACAC/- chr9:14899835-14899838 - ENSMUSG00000031933.17 ENSMUST00000117620.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14899835_ACAC/- chr9:14899835-14899838 - ENSMUSG00000031933.17 ENSMUST00000121116.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=190;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_14899835_ACAC/- chr9:14899835-14899838 - ENSMUSG00000031933.17 ENSMUST00000148155.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=932;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_15839480_TT/- chr9:15839480-15839481 - ENSMUSG00000050901.6 ENSMUST00000182947.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_16279542_CTCT/- chr9:16279542-16279545 - ENSMUSG00000074505.5 ENSMUST00000082170.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_16279542_CTCT/- chr9:16279542-16279545 - ENSMUSG00000074505.5 ENSMUST00000217308.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_16889587_-/TCTC chr9:16889586-16889587 TCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_16899471_-/GAGAGA chr9:16899470-16899471 GAGAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_17708716_TTCTTC/- chr9:17708716-17708721 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_17792773_-/TATT chr9:17792772-17792773 TATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_18369414_-/AA chr9:18369413-18369414 AA ENSMUSG00000043943.14 ENSMUST00000001826.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_18369414_-/AA chr9:18369413-18369414 AA ENSMUSG00000043943.14 ENSMUST00000166825.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_18369414_-/AA chr9:18369413-18369414 AA ENSMUSG00000043943.14 ENSMUST00000172171.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_19073040_ATAT/- chr9:19073040-19073043 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_19447769_-/ATA chr9:19447768-19447769 ATA ENSMUSG00000052182.4 ENSMUST00000217273.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=845;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_19575437_-/TGGAA chr9:19575436-19575437 TGGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_20255742_TGTG/- chr9:20255742-20255745 - ENSMUSG00000066897.8 ENSMUST00000086474.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20255742_TGTG/- chr9:20255742-20255745 - ENSMUSG00000088236.1 ENSMUST00000157611.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2854;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000032171.7 ENSMUST00000034689.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1759;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000129414.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3371;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000154429.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3560;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000160124.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3560;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000160682.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3558;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000160874.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3560;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000161486.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3195;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000161595.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4429;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000161834.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3559;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000161882.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3566;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000161887.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4686;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20650335_TT/- chr9:20650335-20650336 - ENSMUSG00000084786.9 ENSMUST00000162303.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3560;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20687589_A/T chr9:20687589 T ENSMUSG00000032172.8 ENSMUST00000034692.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20687589_A/T chr9:20687589 T ENSMUSG00000032172.8 ENSMUST00000215999.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20687589_A/T chr9:20687589 T ENSMUSG00000032172.8 ENSMUST00000217198.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_20862555_-/CCCCCTGAA chr9:20862554-20862555 CCCCCTGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_21355889_-/AA chr9:21355888-21355889 AA ENSMUSG00000057193.8 ENSMUST00000034697.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=863;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21355889_-/AA chr9:21355888-21355889 AA ENSMUSG00000057193.8 ENSMUST00000213535.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1910;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21355889_-/AA chr9:21355888-21355889 AA ENSMUSG00000057193.8 ENSMUST00000214268.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2037;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21355889_-/AA chr9:21355888-21355889 AA ENSMUSG00000057193.8 ENSMUST00000215574.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=861;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21355889_-/AA chr9:21355888-21355889 AA ENSMUSG00000057193.8 ENSMUST00000217453.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4828;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21355889_-/AA chr9:21355888-21355889 AA ENSMUSG00000057193.8 ENSMUST00000217461.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=860;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21658023_T/A chr9:21658023 A ENSMUSG00000032187.16 ENSMUST00000034707.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21658023_T/A chr9:21658023 A ENSMUSG00000032187.16 ENSMUST00000098948.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21658023_T/A chr9:21658023 A ENSMUSG00000032187.16 ENSMUST00000172996.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_21658023_T/A chr9:21658023 A ENSMUSG00000032187.16 ENSMUST00000174008.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22038834_-/TCTT chr9:22038833-22038834 TCTT ENSMUSG00000003410.8 ENSMUST00000003501.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22038834_-/TCTT chr9:22038833-22038834 TCTT ENSMUSG00000111842.1 ENSMUST00000213738.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22038834_-/TCTT chr9:22038833-22038834 TCTT ENSMUSG00000003410.8 ENSMUST00000215901.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000013822.7 ENSMUST00000013966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000013822.7 ENSMUST00000166335.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2332;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000098646.1 ENSMUST00000183876.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2488;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000013822.7 ENSMUST00000213233.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000111856.1 ENSMUST00000214165.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1171;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000013822.7 ENSMUST00000214394.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000111856.1 ENSMUST00000215411.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=827;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22116501_A/G chr9:22116501 G ENSMUSG00000013822.7 ENSMUST00000216837.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2201;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22366593_TTT/-/TT chr9:22366593-22366595 - ENSMUSG00000036777.8 ENSMUST00000040912.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22366593_TTT/-/TT chr9:22366593-22366595 TT ENSMUSG00000036777.8 ENSMUST00000040912.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22366593_TTT/-/TT chr9:22366593-22366595 - ENSMUSG00000111069.1 ENSMUST00000214468.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3957;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22366593_TTT/-/TT chr9:22366593-22366595 TT ENSMUSG00000111069.1 ENSMUST00000214468.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3957;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22366593_TTT/-/TT chr9:22366593-22366595 - ENSMUSG00000036777.8 ENSMUST00000215486.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1365;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_22366593_TTT/-/TT chr9:22366593-22366595 TT ENSMUSG00000036777.8 ENSMUST00000215486.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1365;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_23438163_TA/T/AA/TAA chr9:23438163-23438164 T ENSMUSG00000031963.8 ENSMUST00000071982.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_23438163_TA/T/AA/TAA chr9:23438163-23438164 AA ENSMUSG00000031963.8 ENSMUST00000071982.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_23438163_TA/T/AA/TAA chr9:23438163-23438164 TAA ENSMUSG00000031963.8 ENSMUST00000071982.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_23461404_-/TCTA chr9:23461403-23461404 TCTA ENSMUSG00000031963.8 ENSMUST00000071982.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_23557527_C/G chr9:23557527 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_24110705_CTCCCTCTCCCTCCCCCTCCCCCTCTCCCCCTCCCCTCCCCTCCCCCTCTTCCTCTCCCCTTCCCTTCCCCCTCTCCCTCTCCCCCTCCCTCTCCCTCTCCCCTTCTCCCTCCCTCTCCCCCTCTCCCTCCCTCCCCACTCCCC/- chr9:24110705-24110848 - ENSMUSG00000043659.11 ENSMUST00000059650.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24110705_CTCCCTCTCCCTCCCCCTCCCCCTCTCCCCCTCCCCTCCCCTCCCCCTCTTCCTCTCCCCTTCCCTTCCCCCTCTCCCTCTCCCCCTCCCTCTCCCTCTCCCCTTCTCCCTCCCTCTCCCCCTCTCCCTCCCTCCCCACTCCCC/- chr9:24110705-24110848 - ENSMUSG00000043659.11 ENSMUST00000133787.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 - ENSMUSG00000043659.11 ENSMUST00000059650.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 TTT ENSMUSG00000043659.11 ENSMUST00000059650.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 - ENSMUSG00000085969.1 ENSMUST00000153522.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4949;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 TTT ENSMUSG00000085969.1 ENSMUST00000153522.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4949;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 - ENSMUSG00000043659.11 ENSMUST00000154337.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 TTT ENSMUSG00000043659.11 ENSMUST00000154337.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 - ENSMUSG00000043659.11 ENSMUST00000154644.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24305206_TT/-/TTT chr9:24305206-24305207 TTT ENSMUSG00000043659.11 ENSMUST00000154644.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24328481_G/C chr9:24328481 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_24503944_AA/- chr9:24503944-24503945 - ENSMUSG00000043067.15 ENSMUST00000142064.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=804;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24503944_AA/- chr9:24503944-24503945 - ENSMUSG00000043067.15 ENSMUST00000170356.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=804;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24503944_AA/- chr9:24503944-24503945 - ENSMUSG00000111365.1 ENSMUST00000216236.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24623278_AA/-/A chr9:24623278-24623279 - ENSMUSG00000047995.7 ENSMUST00000053956.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1917;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24623278_AA/-/A chr9:24623278-24623279 A ENSMUSG00000047995.7 ENSMUST00000053956.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1917;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24623278_AA/-/A chr9:24623278-24623279 - ENSMUSG00000085576.3 ENSMUST00000133010.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24623278_AA/-/A chr9:24623278-24623279 A ENSMUSG00000085576.3 ENSMUST00000133010.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24694297_ATAT/-/ATATAT chr9:24694297-24694300 - ENSMUSG00000085576.3 ENSMUST00000133010.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_24694297_ATAT/-/ATATAT chr9:24694297-24694300 ATATAT ENSMUSG00000085576.3 ENSMUST00000133010.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_25524607_GAGA/- chr9:25524607-25524610 - ENSMUSG00000036611.5 ENSMUST00000040677.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_25602508_C/T chr9:25602508 T ENSMUSG00000036611.5 ENSMUST00000040677.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_25602518_A/C chr9:25602518 C ENSMUSG00000036611.5 ENSMUST00000040677.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_25758748_C/T chr9:25758748 T ENSMUSG00000111416.1 ENSMUST00000215068.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=923;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26417747_A/G chr9:26417747 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_26632381_A/G chr9:26632381 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_26660009_A/T chr9:26660009 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_26823361_A/G chr9:26823361 G ENSMUSG00000031966.7 ENSMUST00000034448.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26823361_A/G chr9:26823361 G ENSMUSG00000031966.7 ENSMUST00000209592.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2366;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26823361_A/G chr9:26823361 G ENSMUSG00000031966.7 ENSMUST00000210274.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26823361_A/G chr9:26823361 G ENSMUSG00000031966.7 ENSMUST00000211353.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26852068_A/T chr9:26852068 T ENSMUSG00000031966.7 ENSMUST00000034448.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26852068_A/T chr9:26852068 T ENSMUSG00000031966.7 ENSMUST00000210274.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26858277_AA/-/A chr9:26858277-26858278 - ENSMUSG00000031966.7 ENSMUST00000034448.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26858277_AA/-/A chr9:26858277-26858278 A ENSMUSG00000031966.7 ENSMUST00000034448.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26858277_AA/-/A chr9:26858277-26858278 - ENSMUSG00000031966.7 ENSMUST00000210274.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26858277_AA/-/A chr9:26858277-26858278 A ENSMUSG00000031966.7 ENSMUST00000210274.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26888643_TGTG/- chr9:26888643-26888646 - ENSMUSG00000079644.2 ENSMUST00000115261.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26888643_TGTG/- chr9:26888643-26888646 - ENSMUSG00000079644.2 ENSMUST00000214847.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_26888643_TGTG/- chr9:26888643-26888646 - ENSMUSG00000079644.2 ENSMUST00000217197.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_27364201_TATC/- chr9:27364201-27364204 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_27388833_ATAT/-/ATATAT chr9:27388833-27388836 - ENSMUSG00000110920.1 ENSMUST00000215351.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2216;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_27388833_ATAT/-/ATATAT chr9:27388833-27388836 ATATAT ENSMUSG00000110920.1 ENSMUST00000215351.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2216;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_27472906_-/T chr9:27472905-27472906 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_27553759_ACAC/- chr9:27553759-27553762 - ENSMUSG00000111694.1 ENSMUST00000214666.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_27583993_TTTC/- chr9:27583993-27583996 - ENSMUSG00000110892.1 ENSMUST00000215197.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=601;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_27599423_TT/- chr9:27599423-27599424 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_28481888_C/T chr9:28481888 T ENSMUSG00000062257.13 ENSMUST00000073822.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_28481888_C/T chr9:28481888 T ENSMUSG00000062257.13 ENSMUST00000115243.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_28481888_C/T chr9:28481888 T ENSMUSG00000062257.13 ENSMUST00000126673.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_28481888_C/T chr9:28481888 T ENSMUSG00000062257.13 ENSMUST00000150098.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000075069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000115236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000115237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000124119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000126044.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000140118.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3115;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000148606.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29017374_TTTT/- chr9:29017374-29017377 - ENSMUSG00000059974.10 ENSMUST00000155308.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3115;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29084484_T/C chr9:29084484 C ENSMUSG00000059974.10 ENSMUST00000075069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29084484_T/C chr9:29084484 C ENSMUSG00000059974.10 ENSMUST00000115236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29084484_T/C chr9:29084484 C ENSMUSG00000059974.10 ENSMUST00000115237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29084484_T/C chr9:29084484 C ENSMUSG00000059974.10 ENSMUST00000124119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29084484_T/C chr9:29084484 C ENSMUSG00000059974.10 ENSMUST00000126044.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29084484_T/C chr9:29084484 C ENSMUSG00000059974.10 ENSMUST00000148606.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29232808_C/A chr9:29232808 A ENSMUSG00000059974.10 ENSMUST00000075069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29232808_C/A chr9:29232808 A ENSMUSG00000059974.10 ENSMUST00000115236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29232808_C/A chr9:29232808 A ENSMUSG00000059974.10 ENSMUST00000115237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29232808_C/A chr9:29232808 A ENSMUSG00000059974.10 ENSMUST00000124119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29232808_C/A chr9:29232808 A ENSMUSG00000059974.10 ENSMUST00000152513.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29298803_A/T chr9:29298803 T ENSMUSG00000059974.10 ENSMUST00000075069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29298803_A/T chr9:29298803 T ENSMUSG00000059974.10 ENSMUST00000115236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29298803_A/T chr9:29298803 T ENSMUSG00000059974.10 ENSMUST00000115237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29298803_A/T chr9:29298803 T ENSMUSG00000059974.10 ENSMUST00000124119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29298803_A/T chr9:29298803 T ENSMUSG00000059974.10 ENSMUST00000152513.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29313683_-/TC chr9:29313682-29313683 TC ENSMUSG00000059974.10 ENSMUST00000075069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29313683_-/TC chr9:29313682-29313683 TC ENSMUSG00000059974.10 ENSMUST00000115236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29313683_-/TC chr9:29313682-29313683 TC ENSMUSG00000059974.10 ENSMUST00000115237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29313683_-/TC chr9:29313682-29313683 TC ENSMUSG00000059974.10 ENSMUST00000124119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29313683_-/TC chr9:29313682-29313683 TC ENSMUSG00000059974.10 ENSMUST00000152513.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29380286_-/AGAA chr9:29380285-29380286 AGAA ENSMUSG00000059974.10 ENSMUST00000075069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29380286_-/AGAA chr9:29380285-29380286 AGAA ENSMUSG00000059974.10 ENSMUST00000115236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29380286_-/AGAA chr9:29380285-29380286 AGAA ENSMUSG00000059974.10 ENSMUST00000115237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29380286_-/AGAA chr9:29380285-29380286 AGAA ENSMUSG00000059974.10 ENSMUST00000124119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29380286_-/AGAA chr9:29380285-29380286 AGAA ENSMUSG00000059974.10 ENSMUST00000152513.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29453688_-/AGAA chr9:29453687-29453688 AGAA ENSMUSG00000059974.10 ENSMUST00000075069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29453688_-/AGAA chr9:29453687-29453688 AGAA ENSMUSG00000059974.10 ENSMUST00000124119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29453688_-/AGAA chr9:29453687-29453688 AGAA ENSMUSG00000059974.10 ENSMUST00000146651.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_29453688_-/AGAA chr9:29453687-29453688 AGAA ENSMUSG00000059974.10 ENSMUST00000152513.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_30087373_TT/- chr9:30087373-30087374 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_30232679_TT/- chr9:30232679-30232680 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_30509859_AAGA/- chr9:30509859-30509862 - ENSMUSG00000111438.1 ENSMUST00000214262.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3078;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_30587116_A/C chr9:30587116 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_30587123_G/C chr9:30587123 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_30616950_G/T chr9:30616950 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_30627140_-/TCT chr9:30627139-30627140 TCT ENSMUSG00000111413.1 ENSMUST00000216883.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31355674_-/AAAG chr9:31355673-31355674 AAAG ENSMUSG00000042496.18 ENSMUST00000074510.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31355674_-/AAAG chr9:31355673-31355674 AAAG ENSMUSG00000042496.18 ENSMUST00000215499.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31355674_-/AAAG chr9:31355673-31355674 AAAG ENSMUSG00000042496.18 ENSMUST00000215847.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31416319_-/TT chr9:31416318-31416319 TT ENSMUSG00000042185.14 ENSMUST00000086167.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31416319_-/TT chr9:31416318-31416319 TT ENSMUSG00000042185.14 ENSMUST00000128375.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31416319_-/TT chr9:31416318-31416319 TT ENSMUSG00000042185.14 ENSMUST00000132329.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31416319_-/TT chr9:31416318-31416319 TT ENSMUSG00000042185.14 ENSMUST00000152593.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31504375_T/G chr9:31504375 G ENSMUSG00000111655.1 ENSMUST00000214381.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_31544048_-/TTTTTTTTTT chr9:31544047-31544048 TTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_32353237_-/TTCT chr9:32353236-32353237 TTCT ENSMUSG00000111056.1 ENSMUST00000213360.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_32353237_-/TTCT chr9:32353236-32353237 TTCT ENSMUSG00000111056.1 ENSMUST00000214720.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_32555309_T/G chr9:32555309 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_32917777_ACAC/-/AC chr9:32917777-32917780 - ENSMUSG00000099025.1 ENSMUST00000185169.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_32917777_ACAC/-/AC chr9:32917777-32917780 AC ENSMUSG00000099025.1 ENSMUST00000185169.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_32963311_-/ATTT chr9:32963310-32963311 ATTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_33040739_C/T chr9:33040739 T ENSMUSG00000098519.1 ENSMUST00000184476.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_33135150_G/T chr9:33135150 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_33694160_-/A chr9:33694159-33694160 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_33694161_-/AGA chr9:33694160-33694161 AGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_34636621_GTGT/- chr9:34636621-34636624 - ENSMUSG00000032036.15 ENSMUST00000045091.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34636621_GTGT/- chr9:34636621-34636624 - ENSMUSG00000032036.15 ENSMUST00000115148.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34636621_GTGT/- chr9:34636621-34636624 - ENSMUSG00000032036.15 ENSMUST00000187182.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34636621_GTGT/- chr9:34636621-34636624 - ENSMUSG00000032036.15 ENSMUST00000187625.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34636621_GTGT/- chr9:34636621-34636624 - ENSMUSG00000032036.15 ENSMUST00000188933.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34636621_GTGT/- chr9:34636621-34636624 - ENSMUSG00000032036.15 ENSMUST00000190549.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34899660_ACAC/- chr9:34899660-34899663 - ENSMUSG00000032036.15 ENSMUST00000045091.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34899660_ACAC/- chr9:34899660-34899663 - ENSMUSG00000032036.15 ENSMUST00000115148.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34899660_ACAC/- chr9:34899660-34899663 - ENSMUSG00000032036.15 ENSMUST00000187182.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34899660_ACAC/- chr9:34899660-34899663 - ENSMUSG00000032036.15 ENSMUST00000187625.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34899660_ACAC/- chr9:34899660-34899663 - ENSMUSG00000032036.15 ENSMUST00000188933.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34899660_ACAC/- chr9:34899660-34899663 - ENSMUSG00000032036.15 ENSMUST00000190549.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34919469_-/AGAT chr9:34919468-34919469 AGAT ENSMUSG00000032036.15 ENSMUST00000045091.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34919469_-/AGAT chr9:34919468-34919469 AGAT ENSMUSG00000053889.5 ENSMUST00000066604.3 Transcript non_coding_transcript_exon_variant 2563-2564 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34919469_-/AGAT chr9:34919468-34919469 AGAT ENSMUSG00000032036.15 ENSMUST00000115148.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34919469_-/AGAT chr9:34919468-34919469 AGAT ENSMUSG00000032036.15 ENSMUST00000187182.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34919469_-/AGAT chr9:34919468-34919469 AGAT ENSMUSG00000032036.15 ENSMUST00000187625.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34919469_-/AGAT chr9:34919468-34919469 AGAT ENSMUSG00000032036.15 ENSMUST00000188933.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_34919469_-/AGAT chr9:34919468-34919469 AGAT ENSMUSG00000032036.15 ENSMUST00000190549.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000034537.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000213526.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000214526.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000215089.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000215638.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000216557.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000217149.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35062032_-/A chr9:35062031-35062032 A ENSMUSG00000032038.7 ENSMUST00000217542.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35624269_C/T chr9:35624269 T ENSMUSG00000074452.13 ENSMUST00000098906.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_35624269_C/T chr9:35624269 T ENSMUSG00000074452.13 ENSMUST00000137309.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_36181427_AG/- chr9:36181427-36181428 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_36430834_TTG/- chr9:36430834-36430836 - ENSMUSG00000023093.7 ENSMUST00000041537.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1048;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_36440320_GTGT/- chr9:36440320-36440323 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_36568910_A/G chr9:36568910 G ENSMUSG00000110880.1 ENSMUST00000214753.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=941;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 - ENSMUSG00000034303.7 ENSMUST00000037275.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 T ENSMUSG00000034303.7 ENSMUST00000037275.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 - ENSMUSG00000034303.7 ENSMUST00000213633.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 T ENSMUSG00000034303.7 ENSMUST00000213633.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 - ENSMUSG00000034303.7 ENSMUST00000215116.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 T ENSMUSG00000034303.7 ENSMUST00000215116.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 - ENSMUSG00000034303.7 ENSMUST00000216042.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 T ENSMUSG00000034303.7 ENSMUST00000216042.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 - ENSMUSG00000034303.7 ENSMUST00000216060.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 T ENSMUSG00000034303.7 ENSMUST00000216060.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 - ENSMUSG00000034303.7 ENSMUST00000217238.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37343662_TT/-/T chr9:37343662-37343663 T ENSMUSG00000034303.7 ENSMUST00000217238.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_37965148_C/T chr9:37965148 T ENSMUSG00000110535.1 ENSMUST00000212344.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3207;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_38069721_CTTT/- chr9:38069721-38069724 - ENSMUSG00000110602.1 ENSMUST00000212395.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_38158696_TGTG/-/TG chr9:38158696-38158699 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_38158696_TGTG/-/TG chr9:38158696-38158699 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_38186796_GGAGAGATAGT/- chr9:38186796-38186806 - ENSMUSG00000098147.1 ENSMUST00000182282.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=969;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_38186796_GGAGAGATAGT/- chr9:38186796-38186806 - ENSMUSG00000110431.1 ENSMUST00000211998.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2921;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_38630904_T/G chr9:38630904 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_39566449_TGTGTG/-/TGTG chr9:39566449-39566454 - ENSMUSG00000059366.3 ENSMUST00000215194.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2929;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_39566449_TGTGTG/-/TGTG chr9:39566449-39566454 TGTG ENSMUSG00000059366.3 ENSMUST00000215194.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2929;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_39566449_TGTGTG/-/TGTG chr9:39566449-39566454 - ENSMUSG00000059366.3 ENSMUST00000216298.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2929;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_39566449_TGTGTG/-/TGTG chr9:39566449-39566454 TGTG ENSMUSG00000059366.3 ENSMUST00000216298.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2929;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_39650326_-/TTTC chr9:39650325-39650326 TTTC ENSMUSG00000059106.5 ENSMUST00000076548.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2653;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_39650326_-/TTTC chr9:39650325-39650326 TTTC ENSMUSG00000059106.5 ENSMUST00000219295.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=769;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_40567742_ATG/- chr9:40567742-40567744 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_40705078_G/A chr9:40705078 A ENSMUSG00000032024.10 ENSMUST00000034522.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_40705078_G/A chr9:40705078 A ENSMUSG00000032024.10 ENSMUST00000139577.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_40705078_G/A chr9:40705078 A ENSMUSG00000032024.10 ENSMUST00000141759.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_40810417_TT/- chr9:40810417-40810418 - ENSMUSG00000015656.17 ENSMUST00000215526.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=330;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_40963514_AAA/- chr9:40963514-40963516 - ENSMUSG00000032023.7 ENSMUST00000034521.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_40963514_AAA/- chr9:40963514-40963516 - ENSMUSG00000032023.7 ENSMUST00000160120.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1181;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41212570_TACCTCTCCTCTCCCCTCCCCCCT/- chr9:41212570-41212593 - ENSMUSG00000100837.7 ENSMUST00000185590.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41212570_TACCTCTCCTCTCCCCTCCCCCCT/- chr9:41212570-41212593 - ENSMUSG00000100837.7 ENSMUST00000188499.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4355;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41212570_TACCTCTCCTCTCCCCTCCCCCCT/- chr9:41212570-41212593 - ENSMUSG00000100837.7 ENSMUST00000191461.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41212570_TACCTCTCCTCTCCCCTCCCCCCT/- chr9:41212570-41212593 - ENSMUSG00000100837.7 ENSMUST00000213914.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41212570_TACCTCTCCTCTCCCCTCCCCCCT/- chr9:41212570-41212593 - ENSMUSG00000100837.7 ENSMUST00000214568.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41700414_CTCT/- chr9:41700414-41700417 - ENSMUSG00000110862.1 ENSMUST00000214447.1 Transcript non_coding_transcript_exon_variant 790-793 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41700414_CTCT/- chr9:41700414-41700417 - ENSMUSG00000110862.1 ENSMUST00000216984.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41700414_CTCT/- chr9:41700414-41700417 - ENSMUSG00000074415.14 ENSMUST00000233927.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_41936552_ATAT/- chr9:41936552-41936555 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_42795187_T/C chr9:42795187 C ENSMUSG00000032017.14 ENSMUST00000034515.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_42795187_T/C chr9:42795187 C ENSMUSG00000032017.14 ENSMUST00000114865.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_43341306_T/G chr9:43341306 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_43386508_T/G chr9:43386508 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_43515312_G/A chr9:43515312 A ENSMUSG00000111110.1 ENSMUST00000215241.1 Transcript non_coding_transcript_exon_variant 1071 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_43515312_G/A chr9:43515312 A ENSMUSG00000111110.1 ENSMUST00000216439.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=51;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_43515312_G/A chr9:43515312 A ENSMUSG00000111110.1 ENSMUST00000216660.1 Transcript non_coding_transcript_exon_variant 521 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_43848726_GAGA/-/GA/GAGAGA chr9:43848726-43848729 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_43848726_GAGA/-/GA/GAGAGA chr9:43848726-43848729 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_43848726_GAGA/-/GA/GAGAGA chr9:43848726-43848729 GAGAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 - ENSMUSG00000032010.15 ENSMUST00000034508.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 A ENSMUSG00000032010.15 ENSMUST00000034508.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 AAA ENSMUSG00000032010.15 ENSMUST00000034508.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 - ENSMUSG00000032010.15 ENSMUST00000114830.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3709;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 A ENSMUSG00000032010.15 ENSMUST00000114830.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3709;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 AAA ENSMUSG00000032010.15 ENSMUST00000114830.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3709;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 - ENSMUSG00000111409.1 ENSMUST00000162126.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 A ENSMUSG00000111409.1 ENSMUST00000162126.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 AAA ENSMUSG00000111409.1 ENSMUST00000162126.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 - ENSMUSG00000032010.15 ENSMUST00000177054.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 A ENSMUSG00000032010.15 ENSMUST00000177054.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 AAA ENSMUSG00000032010.15 ENSMUST00000177054.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 - ENSMUSG00000111409.1 ENSMUST00000185479.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 A ENSMUSG00000111409.1 ENSMUST00000185479.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 AAA ENSMUSG00000111409.1 ENSMUST00000185479.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 - ENSMUSG00000111415.1 ENSMUST00000216448.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1032;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 A ENSMUSG00000111415.1 ENSMUST00000216448.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1032;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44065733_AA/-/A/AAA chr9:44065733-44065734 AAA ENSMUSG00000111415.1 ENSMUST00000216448.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1032;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44132215_AA/- chr9:44132215-44132216 - ENSMUSG00000032135.15 ENSMUST00000034650.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2346;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44132215_AA/- chr9:44132215-44132216 - ENSMUSG00000032135.15 ENSMUST00000098852.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2442;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44132215_AA/- chr9:44132215-44132216 - ENSMUSG00000032135.15 ENSMUST00000132490.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4645;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44132215_AA/- chr9:44132215-44132216 - ENSMUSG00000032135.15 ENSMUST00000147836.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4328;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44132215_AA/- chr9:44132215-44132216 - ENSMUSG00000032135.15 ENSMUST00000149241.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2253;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44132215_AA/- chr9:44132215-44132216 - ENSMUSG00000097617.2 ENSMUST00000180670.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44132215_AA/- chr9:44132215-44132216 - ENSMUSG00000032135.15 ENSMUST00000216002.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2445;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44346867_TTT/- chr9:44346867-44346869 - ENSMUSG00000032127.9 ENSMUST00000034644.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=880;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44346867_TTT/- chr9:44346867-44346869 - ENSMUSG00000032126.16 ENSMUST00000077353.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2639;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44346867_TTT/- chr9:44346867-44346869 - ENSMUSG00000032126.16 ENSMUST00000097558.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4486;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44346867_TTT/- chr9:44346867-44346869 - ENSMUSG00000032127.9 ENSMUST00000214510.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1059;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44346867_TTT/- chr9:44346867-44346869 - ENSMUSG00000032126.16 ENSMUST00000215091.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4562;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44346867_TTT/- chr9:44346867-44346869 - ENSMUSG00000032126.16 ENSMUST00000215934.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4560;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44346867_TTT/- chr9:44346867-44346869 - ENSMUSG00000032126.16 ENSMUST00000216852.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4562;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44525972_A/- chr9:44525972 - ENSMUSG00000047880.15 ENSMUST00000062215.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44525972_A/- chr9:44525972 - ENSMUSG00000047880.15 ENSMUST00000179828.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44525972_A/- chr9:44525972 - ENSMUSG00000047880.15 ENSMUST00000215293.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44525972_A/- chr9:44525972 - ENSMUSG00000047880.15 ENSMUST00000215661.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000032098.13 ENSMUST00000034609.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2787;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000032098.13 ENSMUST00000034609.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2787;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000034611.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000034611.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000032098.13 ENSMUST00000071219.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2787;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000032098.13 ENSMUST00000071219.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2787;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000128326.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000128326.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000129806.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000129806.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000134465.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000134465.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000135436.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000135436.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000138356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000138356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000032098.13 ENSMUST00000139389.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2788;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000032098.13 ENSMUST00000139389.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2788;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000144251.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000144251.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000147495.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000147495.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000148344.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000148344.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000032098.13 ENSMUST00000150822.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3076;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000032098.13 ENSMUST00000150822.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3076;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 - ENSMUSG00000048537.16 ENSMUST00000156918.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44689092_AA/-/AAA chr9:44689092-44689093 AAA ENSMUSG00000048537.16 ENSMUST00000156918.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44742757_-/A chr9:44742756-44742757 A ENSMUSG00000032096.16 ENSMUST00000034607.9 Transcript 3_prime_UTR_variant 2879-2880 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_44742760_T/A chr9:44742760 A ENSMUSG00000032096.16 ENSMUST00000034607.9 Transcript 3_prime_UTR_variant 2876 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000032091.15 ENSMUST00000034599.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=950;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000032091.15 ENSMUST00000034599.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=950;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000032091.15 ENSMUST00000163237.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1529;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000032091.15 ENSMUST00000163237.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1529;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000032091.15 ENSMUST00000163945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3021;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000032091.15 ENSMUST00000163945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3021;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000032091.15 ENSMUST00000165263.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1529;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000032091.15 ENSMUST00000165263.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1529;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000091659.1 ENSMUST00000166780.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000091659.1 ENSMUST00000166780.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000032091.15 ENSMUST00000170069.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=951;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000032091.15 ENSMUST00000170069.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=951;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000111811.1 ENSMUST00000213594.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000111811.1 ENSMUST00000213594.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 - ENSMUSG00000111811.1 ENSMUST00000215874.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45171775_TT/-/T chr9:45171775-45171776 T ENSMUSG00000111811.1 ENSMUST00000215874.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 - ENSMUSG00000097074.2 ENSMUST00000181230.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 AC ENSMUSG00000097074.2 ENSMUST00000181230.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 - ENSMUSG00000032087.10 ENSMUST00000213919.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 AC ENSMUSG00000032087.10 ENSMUST00000213919.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 - ENSMUSG00000032087.10 ENSMUST00000216340.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2028;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 AC ENSMUSG00000032087.10 ENSMUST00000216340.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2028;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 - ENSMUSG00000032087.10 ENSMUST00000217335.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1435;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 AC ENSMUSG00000032087.10 ENSMUST00000217335.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1435;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 - ENSMUSG00000032087.10 ENSMUST00000217538.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45425190_ACAC/-/AC chr9:45425190-45425193 AC ENSMUSG00000032087.10 ENSMUST00000217538.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45730117_C/T chr9:45730117 T ENSMUSG00000032087.10 ENSMUST00000034592.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_45730117_C/T chr9:45730117 T ENSMUSG00000032087.10 ENSMUST00000216685.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_46097814_GC/- chr9:46097814-46097815 - ENSMUSG00000034135.15 ENSMUST00000120247.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_46097814_GC/- chr9:46097814-46097815 - ENSMUSG00000034135.15 ENSMUST00000120463.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_46097814_GC/- chr9:46097814-46097815 - ENSMUSG00000034135.15 ENSMUST00000126865.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_46595934_C/T chr9:46595934 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_47066595_GTGT/- chr9:47066595-47066598 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_47221080_CTCACACACACACTCACACACACACT/- chr9:47221080-47221105 - ENSMUSG00000111669.1 ENSMUST00000217115.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 - ENSMUSG00000109844.2 ENSMUST00000209388.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 TA ENSMUSG00000109844.2 ENSMUST00000209388.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 - ENSMUSG00000109844.2 ENSMUST00000209591.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 TA ENSMUSG00000109844.2 ENSMUST00000209591.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 - ENSMUSG00000109844.2 ENSMUST00000209906.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 TA ENSMUSG00000109844.2 ENSMUST00000209906.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 - ENSMUSG00000109844.2 ENSMUST00000210151.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 TA ENSMUSG00000109844.2 ENSMUST00000210151.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 - ENSMUSG00000109844.2 ENSMUST00000210492.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47317203_TATA/-/TA chr9:47317203-47317206 TA ENSMUSG00000109844.2 ENSMUST00000210492.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000034581.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000085909.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000114547.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000114548.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000124073.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000143026.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000148925.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000151624.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000152459.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_47667115_TGTGTG/- chr9:47667115-47667120 - ENSMUSG00000032076.19 ENSMUST00000214542.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48248589_GTGT/- chr9:48248589-48248592 - ENSMUSG00000044229.9 ENSMUST00000215780.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48248589_GTGT/- chr9:48248589-48248592 - ENSMUSG00000044229.9 ENSMUST00000216998.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48264085_ACAC/-/AC chr9:48264085-48264088 - ENSMUSG00000044229.9 ENSMUST00000215780.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48264085_ACAC/-/AC chr9:48264085-48264088 AC ENSMUSG00000044229.9 ENSMUST00000215780.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48264085_ACAC/-/AC chr9:48264085-48264088 - ENSMUSG00000044229.9 ENSMUST00000216998.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48264085_ACAC/-/AC chr9:48264085-48264088 AC ENSMUSG00000044229.9 ENSMUST00000216998.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48780654_ACAC/-/AC chr9:48780654-48780657 - ENSMUSG00000066687.5 ENSMUST00000093852.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48780654_ACAC/-/AC chr9:48780654-48780657 AC ENSMUSG00000066687.5 ENSMUST00000093852.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48780654_ACAC/-/AC chr9:48780654-48780657 - ENSMUSG00000066687.5 ENSMUST00000216150.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_48780654_ACAC/-/AC chr9:48780654-48780657 AC ENSMUSG00000066687.5 ENSMUST00000216150.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_49126587_T/C chr9:49126587 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_49126607_T/C chr9:49126607 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_49325875_T/C chr9:49325875 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_49487619_-/CCCCCCCC chr9:49487618-49487619 CCCCCCCC ENSMUSG00000040219.4 ENSMUST00000055096.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1393;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_49487619_-/CCCCCCCC chr9:49487618-49487619 CCCCCCCC ENSMUSG00000040219.4 ENSMUST00000146666.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1403;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50379816_TT/- chr9:50379816-50379817 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_50384201_AGG/CCC chr9:50384201-50384203 CCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000034560.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1935;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000114437.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1948;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000174555.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000174628.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1935;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000175640.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1977;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000175645.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1968;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000175926.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1990;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000176349.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1974;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50854988_AA/- chr9:50854988-50854989 - ENSMUSG00000032058.14 ENSMUST00000176798.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1975;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50985163_TT/- chr9:50985163-50985164 - ENSMUSG00000037112.16 ENSMUST00000041375.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50985163_TT/- chr9:50985163-50985164 - ENSMUSG00000037112.16 ENSMUST00000068484.15 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50985163_TT/- chr9:50985163-50985164 - ENSMUSG00000037112.16 ENSMUST00000176491.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50985163_TT/- chr9:50985163-50985164 - ENSMUSG00000037112.16 ENSMUST00000176663.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50985163_TT/- chr9:50985163-50985164 - ENSMUSG00000037112.16 ENSMUST00000176824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50985163_TT/- chr9:50985163-50985164 - ENSMUSG00000037112.16 ENSMUST00000177203.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_50985163_TT/- chr9:50985163-50985164 - ENSMUSG00000037112.16 ENSMUST00000177346.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_51321501_AGAG/-/AG chr9:51321501-51321504 - ENSMUSG00000036027.11 ENSMUST00000039959.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_51321501_AGAG/-/AG chr9:51321501-51321504 AG ENSMUSG00000036027.11 ENSMUST00000039959.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_51353234_GTGTGT/- chr9:51353234-51353239 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_51518233_GAGAGGGAGAGAGAGAGAGAGAGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGG/- chr9:51518233-51518296 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_51975570_TGTG/- chr9:51975570-51975573 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_52631815_CACA/- chr9:52631815-52631818 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_54537430_AGAG/-/AG chr9:54537430-54537433 - ENSMUSG00000046460.14 ENSMUST00000060242.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1551;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_54537430_AGAG/-/AG chr9:54537430-54537433 AG ENSMUSG00000046460.14 ENSMUST00000060242.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1551;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_54537430_AGAG/-/AG chr9:54537430-54537433 - ENSMUSG00000046460.14 ENSMUST00000118413.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1555;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_54537430_AGAG/-/AG chr9:54537430-54537433 AG ENSMUSG00000046460.14 ENSMUST00000118413.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1555;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_54537430_AGAG/-/AG chr9:54537430-54537433 - ENSMUSG00000087801.1 ENSMUST00000157176.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=28;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_54537430_AGAG/-/AG chr9:54537430-54537433 AG ENSMUSG00000087801.1 ENSMUST00000157176.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=28;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_54841807_CTCT/-/CT chr9:54841807-54841810 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_54841807_CTCT/-/CT chr9:54841807-54841810 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_55709033_-/ACACACACACAC chr9:55709032-55709033 ACACACACACAC ENSMUSG00000034007.10 ENSMUST00000037408.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55709033_-/ACACACACACAC chr9:55709032-55709033 ACACACACACAC ENSMUSG00000034007.10 ENSMUST00000214747.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55709033_-/ACACACACACAC chr9:55709032-55709033 ACACACACACAC ENSMUSG00000034007.10 ENSMUST00000216595.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55709033_-/ACACACACACAC chr9:55709032-55709033 ACACACACACAC ENSMUSG00000034007.10 ENSMUST00000217647.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55774240_C/T chr9:55774240 T ENSMUSG00000034007.10 ENSMUST00000037408.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55774240_C/T chr9:55774240 T ENSMUSG00000034007.10 ENSMUST00000214747.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55774240_C/T chr9:55774240 T ENSMUSG00000034007.10 ENSMUST00000215323.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55774240_C/T chr9:55774240 T ENSMUSG00000034007.10 ENSMUST00000216595.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_55774240_C/T chr9:55774240 T ENSMUSG00000034007.10 ENSMUST00000217647.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_56645846_T/C/TTC chr9:56645846 C ENSMUSG00000049556.5 ENSMUST00000053568.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_56645846_T/C/TTC chr9:56645846 TTC ENSMUSG00000049556.5 ENSMUST00000053568.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_56645846_T/C/TTC chr9:56645846 C ENSMUSG00000049556.5 ENSMUST00000114247.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_56645846_T/C/TTC chr9:56645846 TTC ENSMUSG00000049556.5 ENSMUST00000114247.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_56645846_T/C/TTC chr9:56645846 C ENSMUSG00000049556.5 ENSMUST00000210032.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_56645846_T/C/TTC chr9:56645846 TTC ENSMUSG00000049556.5 ENSMUST00000210032.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_57969814_G/A chr9:57969814 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_58238528_-/TTTTTTTTTTT chr9:58238527-58238528 TTTTTTTTTTT ENSMUSG00000036986.16 ENSMUST00000085673.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_58238528_-/TTTTTTTTTTT chr9:58238527-58238528 TTTTTTTTTTT ENSMUSG00000036986.16 ENSMUST00000114136.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_58238528_-/TTTTTTTTTTT chr9:58238527-58238528 TTTTTTTTTTT ENSMUSG00000036986.16 ENSMUST00000124063.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_58238528_-/TTTTTTTTTTT chr9:58238527-58238528 TTTTTTTTTTT ENSMUSG00000036986.16 ENSMUST00000126690.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_58238528_-/TTTTTTTTTTT chr9:58238527-58238528 TTTTTTTTTTT ENSMUSG00000036986.16 ENSMUST00000135310.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_58238528_-/TTTTTTTTTTT chr9:58238527-58238528 TTTTTTTTTTT ENSMUSG00000036986.16 ENSMUST00000148301.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_58238528_-/TTTTTTTTTTT chr9:58238527-58238528 TTTTTTTTTTT ENSMUSG00000036986.16 ENSMUST00000153820.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59171206_TGTG/-/TG chr9:59171206-59171209 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_59171206_TGTG/-/TG chr9:59171206-59171209 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_59283746_GTGT/- chr9:59283746-59283749 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_59382267_G/T chr9:59382267 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_59465105_AA/- chr9:59465105-59465106 - ENSMUSG00000025234.11 ENSMUST00000026264.11 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59465105_AA/- chr9:59465105-59465106 - ENSMUSG00000025234.11 ENSMUST00000165322.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59465105_AA/- chr9:59465105-59465106 - ENSMUSG00000025234.11 ENSMUST00000168497.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59465105_AA/- chr9:59465105-59465106 - ENSMUSG00000025234.11 ENSMUST00000168982.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59465105_AA/- chr9:59465105-59465106 - ENSMUSG00000025234.11 ENSMUST00000171975.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59508420_GGGGGAGGGGGA/- chr9:59508420-59508431 - ENSMUSG00000111852.1 ENSMUST00000217109.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59523438_CTCT/-/CT chr9:59523438-59523441 - ENSMUSG00000049526.8 ENSMUST00000055345.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59523438_CTCT/-/CT chr9:59523438-59523441 CT ENSMUSG00000049526.8 ENSMUST00000055345.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59523438_CTCT/-/CT chr9:59523438-59523441 - ENSMUSG00000049526.8 ENSMUST00000214580.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59523438_CTCT/-/CT chr9:59523438-59523441 CT ENSMUSG00000049526.8 ENSMUST00000214580.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59523438_CTCT/-/CT chr9:59523438-59523441 - ENSMUSG00000049526.8 ENSMUST00000216061.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1277;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59523438_CTCT/-/CT chr9:59523438-59523441 CT ENSMUSG00000049526.8 ENSMUST00000216061.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1277;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59594686_GTGT/- chr9:59594686-59594689 - ENSMUSG00000032297.11 ENSMUST00000034840.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59594686_GTGT/- chr9:59594686-59594689 - ENSMUSG00000032297.11 ENSMUST00000118164.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59594686_GTGT/- chr9:59594686-59594689 - ENSMUSG00000032297.11 ENSMUST00000118549.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59594686_GTGT/- chr9:59594686-59594689 - ENSMUSG00000032297.11 ENSMUST00000121266.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59594686_GTGT/- chr9:59594686-59594689 - ENSMUSG00000032297.11 ENSMUST00000129357.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_59594686_GTGT/- chr9:59594686-59594689 - ENSMUSG00000032297.11 ENSMUST00000143916.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60172145_CA/- chr9:60172145-60172146 - ENSMUSG00000032289.15 ENSMUST00000098660.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60172145_CA/- chr9:60172145-60172146 - ENSMUSG00000032289.15 ENSMUST00000171654.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60444771_CACA/- chr9:60444771-60444774 - ENSMUSG00000032289.15 ENSMUST00000098660.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60444771_CACA/- chr9:60444771-60444774 - ENSMUSG00000032289.15 ENSMUST00000140824.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60444771_CACA/- chr9:60444771-60444774 - ENSMUSG00000032289.15 ENSMUST00000171654.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60659182_ATAT/- chr9:60659182-60659185 - ENSMUSG00000047766.15 ENSMUST00000065603.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60659182_ATAT/- chr9:60659182-60659185 - ENSMUSG00000047766.15 ENSMUST00000114032.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60659182_ATAT/- chr9:60659182-60659185 - ENSMUSG00000047766.15 ENSMUST00000114034.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60659182_ATAT/- chr9:60659182-60659185 - ENSMUSG00000047766.15 ENSMUST00000128877.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60659182_ATAT/- chr9:60659182-60659185 - ENSMUSG00000047766.15 ENSMUST00000150060.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60659182_ATAT/- chr9:60659182-60659185 - ENSMUSG00000047766.15 ENSMUST00000166168.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876057_-/ACACACACACACACACACACACACAG chr9:60876056-60876057 ACACACACACACACACACACACACAG ENSMUSG00000034485.10 ENSMUST00000050183.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876057_-/ACACACACACACACACACACACACAG chr9:60876056-60876057 ACACACACACACACACACACACACAG ENSMUSG00000034485.10 ENSMUST00000214354.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876057_-/ACACACACACACACACACACACACAG chr9:60876056-60876057 ACACACACACACACACACACACACAG ENSMUSG00000034485.10 ENSMUST00000214997.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876057_-/ACACACACACACACACACACACACAG chr9:60876056-60876057 ACACACACACACACACACACACACAG ENSMUSG00000034485.10 ENSMUST00000217656.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876084_G/C chr9:60876084 C ENSMUSG00000034485.10 ENSMUST00000050183.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876084_G/C chr9:60876084 C ENSMUSG00000034485.10 ENSMUST00000214354.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876084_G/C chr9:60876084 C ENSMUSG00000034485.10 ENSMUST00000214997.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_60876084_G/C chr9:60876084 C ENSMUSG00000034485.10 ENSMUST00000217656.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_61321416_GTGTGT/-/GTGT/GTGTGTGT chr9:61321416-61321421 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_61321416_GTGTGT/-/GTGT/GTGTGTGT chr9:61321416-61321421 GTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_61321416_GTGTGT/-/GTGT/GTGTGTGT chr9:61321416-61321421 GTGTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_61574521_GGGG/-/GG chr9:61574521-61574524 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_61574521_GGGG/-/GG chr9:61574521-61574524 GG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_62538239_G/C chr9:62538239 C ENSMUSG00000041729.15 ENSMUST00000048043.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_62538239_G/C chr9:62538239 C ENSMUSG00000041729.15 ENSMUST00000123379.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1279;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_62941895_ACAC/- chr9:62941895-62941898 - ENSMUSG00000032405.10 ENSMUST00000098651.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_62941895_ACAC/- chr9:62941895-62941898 - ENSMUSG00000032405.10 ENSMUST00000214830.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_62941895_ACAC/- chr9:62941895-62941898 - ENSMUSG00000032405.10 ENSMUST00000215455.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_62941895_ACAC/- chr9:62941895-62941898 - ENSMUSG00000032405.10 ENSMUST00000216209.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_62990780_-/T chr9:62990779-62990780 T ENSMUSG00000032405.10 ENSMUST00000216209.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2855;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_63263574_ACAC/- chr9:63263574-63263577 - ENSMUSG00000058444.8 ENSMUST00000034920.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_63263574_ACAC/- chr9:63263574-63263577 - ENSMUSG00000058444.8 ENSMUST00000213604.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_63851813_AA/-/A chr9:63851813-63851814 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_63851813_AA/-/A chr9:63851813-63851814 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_63881981_GTGT/-/GT chr9:63881981-63881984 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_63881981_GTGT/-/GT chr9:63881981-63881984 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000122091.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000124301.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4631;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000130127.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3343;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000138075.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2548;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000148428.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2300;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000176299.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000176378.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3320;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000176794.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64158051_-/A chr9:64158050-64158051 A ENSMUSG00000032400.18 ENSMUST00000177045.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_64271680_CACA/- chr9:64271680-64271683 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_65139878_GTGTGT/- chr9:65139878-65139883 - ENSMUSG00000032394.6 ENSMUST00000034961.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1306;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65139878_GTGTGT/- chr9:65139878-65139883 - ENSMUSG00000032816.15 ENSMUST00000035499.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1938;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65139878_GTGTGT/- chr9:65139878-65139883 - ENSMUSG00000032816.15 ENSMUST00000077696.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1938;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65139878_GTGTGT/- chr9:65139878-65139883 - ENSMUSG00000032816.15 ENSMUST00000166273.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4298;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65139878_GTGTGT/- chr9:65139878-65139883 - ENSMUSG00000032816.15 ENSMUST00000213533.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1938;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65139878_GTGTGT/- chr9:65139878-65139883 - ENSMUSG00000032394.6 ENSMUST00000217371.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1329;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65669983_G/C chr9:65669983 C ENSMUSG00000040652.16 ENSMUST00000128928.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65669983_G/C chr9:65669983 C ENSMUSG00000040652.16 ENSMUST00000154502.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000040204.6 ENSMUST00000045802.6 Transcript 3_prime_UTR_variant 2004-2005 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000065301.1 ENSMUST00000083367.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2774;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000032386.15 ENSMUST00000119245.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000032386.15 ENSMUST00000126517.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000032386.15 ENSMUST00000133747.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000032386.15 ENSMUST00000134338.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000032386.15 ENSMUST00000139346.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000032386.15 ENSMUST00000143864.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_65903082_TT/- chr9:65903082-65903083 - ENSMUSG00000032386.15 ENSMUST00000179395.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_66961838_CACA/- chr9:66961838-66961841 - ENSMUSG00000032370.8 ENSMUST00000034929.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_66961838_CACA/- chr9:66961838-66961841 - ENSMUSG00000032370.8 ENSMUST00000215172.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_67515909_TT/- chr9:67515909-67515910 - ENSMUSG00000052698.15 ENSMUST00000039662.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_67515909_TT/- chr9:67515909-67515910 - ENSMUSG00000052698.15 ENSMUST00000040025.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_67515909_TT/- chr9:67515909-67515910 - ENSMUSG00000052698.15 ENSMUST00000215784.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_67566347_-/AC chr9:67566346-67566347 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_67920651_-/T chr9:67920650-67920651 T ENSMUSG00000035284.10 ENSMUST00000077879.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_68051157_G/A chr9:68051157 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_68156600_G/T chr9:68156600 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_68173766_CC/- chr9:68173766-68173767 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_68185418_G/A chr9:68185418 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_68275745_GAGAGA/- chr9:68275745-68275750 - ENSMUSG00000088810.1 ENSMUST00000158185.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4824;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_69256145_A/G chr9:69256145 G ENSMUSG00000032238.17 ENSMUST00000034766.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_69256145_A/G chr9:69256145 G ENSMUSG00000032238.17 ENSMUST00000174296.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_69283883_AAAAA/- chr9:69283883-69283887 - ENSMUSG00000032238.17 ENSMUST00000034766.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_69283883_AAAAA/- chr9:69283883-69283887 - ENSMUSG00000032238.17 ENSMUST00000174296.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_69775072_A/C chr9:69775072 C ENSMUSG00000097623.7 ENSMUST00000180488.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_69775072_A/C chr9:69775072 C ENSMUSG00000097623.7 ENSMUST00000180914.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_70500173_GGGGGAA/- chr9:70500173-70500179 - ENSMUSG00000032217.13 ENSMUST00000034739.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_70500173_GGGGGAA/- chr9:70500173-70500179 - ENSMUSG00000032217.13 ENSMUST00000113595.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_70500173_GGGGGAA/- chr9:70500173-70500179 - ENSMUSG00000032217.13 ENSMUST00000213647.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_70500173_GGGGGAA/- chr9:70500173-70500179 - ENSMUSG00000032217.13 ENSMUST00000213694.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_70500173_GGGGGAA/- chr9:70500173-70500179 - ENSMUSG00000032217.13 ENSMUST00000215848.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71054216_T/C chr9:71054216 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_71189671_A/T chr9:71189671 T ENSMUSG00000111429.1 ENSMUST00000214960.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71189671_A/T chr9:71189671 T ENSMUSG00000111429.1 ENSMUST00000217021.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71346721_CACA/- chr9:71346721-71346724 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_71718120_T/A chr9:71718120 A ENSMUSG00000032232.14 ENSMUST00000072899.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71718120_T/A chr9:71718120 A ENSMUSG00000032232.14 ENSMUST00000121322.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71718120_T/A chr9:71718120 A ENSMUSG00000032232.14 ENSMUST00000122065.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71746887_GTGT/- chr9:71746887-71746890 - ENSMUSG00000032232.14 ENSMUST00000072899.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71746887_GTGT/- chr9:71746887-71746890 - ENSMUSG00000032232.14 ENSMUST00000121322.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71746887_GTGT/- chr9:71746887-71746890 - ENSMUSG00000032232.14 ENSMUST00000122065.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000034755.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000034755.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000183404.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000183404.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000183492.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000183492.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000183594.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000183594.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000183647.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000183647.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000099313.1 ENSMUST00000183828.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3369;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000099313.1 ENSMUST00000183828.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3369;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000183992.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000183992.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000184072.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000184072.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000184107.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000184107.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000184196.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000184196.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000184416.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000184416.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000184523.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000184523.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000184783.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000184783.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000184867.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000184867.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000032228.16 ENSMUST00000185117.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000032228.16 ENSMUST00000185117.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 - ENSMUSG00000104107.1 ENSMUST00000193112.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3924;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_71945509_AA/-/A chr9:71945509-71945510 A ENSMUSG00000104107.1 ENSMUST00000193112.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3924;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000098576.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000183400.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000183410.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000184036.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000184053.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000184399.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000184517.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000184639.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_72283309_TTT/- chr9:72283309-72283311 - ENSMUSG00000038535.17 ENSMUST00000184968.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063258_AT/- chr9:73063258-73063259 - ENSMUSG00000032202.11 ENSMUST00000034722.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063258_AT/- chr9:73063258-73063259 - ENSMUSG00000032202.11 ENSMUST00000184146.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063258_AT/- chr9:73063258-73063259 - ENSMUSG00000098468.1 ENSMUST00000184223.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2001;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063258_AT/- chr9:73063258-73063259 - ENSMUSG00000032202.11 ENSMUST00000184575.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063284_ATACACACACAT/- chr9:73063284-73063295 - ENSMUSG00000032202.11 ENSMUST00000034722.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063284_ATACACACACAT/- chr9:73063284-73063295 - ENSMUSG00000032202.11 ENSMUST00000184146.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063284_ATACACACACAT/- chr9:73063284-73063295 - ENSMUSG00000098468.1 ENSMUST00000184223.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2027;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73063284_ATACACACACAT/- chr9:73063284-73063295 - ENSMUSG00000032202.11 ENSMUST00000184575.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73824753_C/T chr9:73824753 T ENSMUSG00000062151.13 ENSMUST00000075245.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73824753_C/T chr9:73824753 T ENSMUSG00000062151.13 ENSMUST00000184666.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_73961949_GAGA/- chr9:73961949-73961952 - ENSMUSG00000062151.13 ENSMUST00000184666.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_74573049_-/TAGA chr9:74573048-74573049 TAGA ENSMUSG00000098748.1 ENSMUST00000184119.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4621;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_74599422_ACAC/-/AC chr9:74599422-74599425 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_74599422_ACAC/-/AC chr9:74599422-74599425 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_74710823_AGGAAGGAAGGAAAGAAAGAAGGAAAGAGAGAGAAGGAAAGAGAAAG/- chr9:74710823-74710869 - ENSMUSG00000098272.1 ENSMUST00000184030.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1255;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75294590_ACAC/- chr9:75294590-75294593 - ENSMUSG00000033590.8 ENSMUST00000036555.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75294590_ACAC/- chr9:75294590-75294593 - ENSMUSG00000033590.8 ENSMUST00000213424.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=566;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75294590_ACAC/- chr9:75294590-75294593 - ENSMUSG00000033590.8 ENSMUST00000215620.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75680961_TT/- chr9:75680961-75680962 - ENSMUSG00000032181.7 ENSMUST00000034699.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75680961_TT/- chr9:75680961-75680962 - ENSMUSG00000032181.7 ENSMUST00000213324.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75680961_TT/- chr9:75680961-75680962 - ENSMUSG00000032181.7 ENSMUST00000213637.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1039;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75680961_TT/- chr9:75680961-75680962 - ENSMUSG00000032181.7 ENSMUST00000214176.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1103;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75680961_TT/- chr9:75680961-75680962 - ENSMUSG00000032181.7 ENSMUST00000214244.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1057;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75680961_TT/- chr9:75680961-75680962 - ENSMUSG00000032181.7 ENSMUST00000215603.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_75680961_TT/- chr9:75680961-75680962 - ENSMUSG00000032181.7 ENSMUST00000215722.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_76484676_CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT/- chr9:76484676-76484727 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_78003921_AA/- chr9:78003921-78003922 - ENSMUSG00000111610.1 ENSMUST00000213816.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1668;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_78003921_AA/- chr9:78003921-78003922 - ENSMUSG00000111610.1 ENSMUST00000216017.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1660;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_78390815_G/T chr9:78390815 T ENSMUSG00000070291.4 ENSMUST00000113367.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_78390815_G/T chr9:78390815 T ENSMUSG00000083032.1 ENSMUST00000119091.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1348;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_78390815_G/T chr9:78390815 T ENSMUSG00000090724.1 ENSMUST00000171096.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4141;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_79856331_G/T chr9:79856331 T ENSMUSG00000034898.16 ENSMUST00000093811.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_79856331_G/T chr9:79856331 T ENSMUSG00000034898.16 ENSMUST00000172973.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_79953179_CACA/- chr9:79953179-79953182 - ENSMUSG00000034898.16 ENSMUST00000093811.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_79953179_CACA/- chr9:79953179-79953182 - ENSMUSG00000034898.16 ENSMUST00000172973.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_79953179_CACA/- chr9:79953179-79953182 - ENSMUSG00000034898.16 ENSMUST00000217264.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000035889.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000076140.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000113266.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000113268.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000127779.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000139981.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1249;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000156199.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=382;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80285031_AA/- chr9:80285031-80285032 - ENSMUSG00000033577.18 ENSMUST00000184480.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80627868_C/A chr9:80627868 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_80856708_G/- chr9:80856708 - ENSMUSG00000098685.1 ENSMUST00000184749.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_80903485_T/G chr9:80903485 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_81146735_-/TG chr9:81146734-81146735 TG ENSMUSG00000097655.3 ENSMUST00000181827.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_81965756_-/CTAT chr9:81965755-81965756 CTAT ENSMUSG00000043289.12 ENSMUST00000057067.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_81965756_-/CTAT chr9:81965755-81965756 CTAT ENSMUSG00000043289.12 ENSMUST00000189391.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_81965756_-/CTAT chr9:81965755-81965756 CTAT ENSMUSG00000043289.12 ENSMUST00000189832.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_81978562_-/GATA chr9:81978561-81978562 GATA ENSMUSG00000043289.12 ENSMUST00000057067.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_81978562_-/GATA chr9:81978561-81978562 GATA ENSMUSG00000043289.12 ENSMUST00000189391.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_81978562_-/GATA chr9:81978561-81978562 GATA ENSMUSG00000043289.12 ENSMUST00000189832.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_82269120_AA/- chr9:82269120-82269121 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_83143972_TG/- chr9:83143972-83143973 - ENSMUSG00000066456.14 ENSMUST00000161796.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83143972_TG/- chr9:83143972-83143973 - ENSMUSG00000066456.14 ENSMUST00000162246.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83143972_TG/- chr9:83143972-83143973 - ENSMUSG00000066456.14 ENSMUST00000185315.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83143972_TG/- chr9:83143972-83143973 - ENSMUSG00000066456.14 ENSMUST00000187193.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83143972_TG/- chr9:83143972-83143973 - ENSMUSG00000101144.2 ENSMUST00000187589.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1973;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83143972_TG/- chr9:83143972-83143973 - ENSMUSG00000066456.14 ENSMUST00000190154.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83143972_TG/- chr9:83143972-83143973 - ENSMUSG00000101144.2 ENSMUST00000194148.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1942;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83315784_GT/- chr9:83315784-83315785 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_83664965_G/T chr9:83664965 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_83688123_A/G chr9:83688123 G ENSMUSG00000100155.1 ENSMUST00000189326.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3352;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_83688123_A/G chr9:83688123 G ENSMUSG00000111820.1 ENSMUST00000214393.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=598;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_84263363_-/TTCT chr9:84263362-84263363 TTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_85235257_-/A chr9:85235256-85235257 A ENSMUSG00000111822.1 ENSMUST00000213613.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3651;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_85235257_-/A chr9:85235256-85235257 A ENSMUSG00000111281.1 ENSMUST00000216158.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=674;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86208303_GGGAGGGAGGGAGGAACGGAGGCAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA/- chr9:86208303-86208358 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_86697811_CACACA/- chr9:86697811-86697816 - ENSMUSG00000032418.15 ENSMUST00000034989.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1858;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86697811_CACACA/- chr9:86697811-86697816 - ENSMUSG00000087466.3 ENSMUST00000150367.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86697811_CACACA/- chr9:86697811-86697816 - ENSMUSG00000093074.1 ENSMUST00000175333.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1227;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 - ENSMUSG00000033419.15 ENSMUST00000036347.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 AA ENSMUSG00000033419.15 ENSMUST00000036347.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 - ENSMUSG00000033419.15 ENSMUST00000074468.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 AA ENSMUSG00000033419.15 ENSMUST00000074468.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 - ENSMUSG00000033419.15 ENSMUST00000074501.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 AA ENSMUSG00000033419.15 ENSMUST00000074501.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 - ENSMUSG00000033419.15 ENSMUST00000098495.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 AA ENSMUSG00000033419.15 ENSMUST00000098495.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 - ENSMUSG00000033419.15 ENSMUST00000189762.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 AA ENSMUSG00000033419.15 ENSMUST00000189762.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 - ENSMUSG00000033419.15 ENSMUST00000190388.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2045;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_86810786_AAA/-/AA chr9:86810786-86810788 AA ENSMUSG00000033419.15 ENSMUST00000190388.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2045;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_87011320_CGTGCG/- chr9:87011320-87011325 - ENSMUSG00000047897.10 ENSMUST00000058846.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4212;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_87011320_CGTGCG/- chr9:87011320-87011325 - ENSMUSG00000047897.10 ENSMUST00000188187.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4311;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_87277158_C/A chr9:87277158 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_87521912_TGTG/- chr9:87521912-87521915 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_87716668_TGTG/- chr9:87716668-87716671 - ENSMUSG00000032419.8 ENSMUST00000034991.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_88230479_A/T chr9:88230479 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_88672541_G/A chr9:88672541 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_88822617_C/G chr9:88822617 G ENSMUSG00000101698.1 ENSMUST00000190113.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4905;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_88822617_C/G chr9:88822617 G ENSMUSG00000103837.1 ENSMUST00000195645.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000085256.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000117314.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000127438.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000127868.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000144930.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000147644.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000149688.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000185894.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000186009.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235470_A/G chr9:89235470 G ENSMUSG00000066442.17 ENSMUST00000187362.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000085256.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000117314.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000127438.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000127868.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000144930.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000147644.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000149688.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000185894.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000186009.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89235485_T/C chr9:89235485 C ENSMUSG00000066442.17 ENSMUST00000187362.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89290484_GT/- chr9:89290484-89290485 - ENSMUSG00000066442.17 ENSMUST00000186009.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89480326_AA/- chr9:89480326-89480327 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_89594667_TCTC/-/TC chr9:89594667-89594670 - ENSMUSG00000039313.14 ENSMUST00000044491.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89594667_TCTC/-/TC chr9:89594667-89594670 TC ENSMUSG00000039313.14 ENSMUST00000044491.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89594667_TCTC/-/TC chr9:89594667-89594670 - ENSMUSG00000039313.14 ENSMUST00000191465.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89594667_TCTC/-/TC chr9:89594667-89594670 TC ENSMUSG00000039313.14 ENSMUST00000191465.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89645913_AGAAGA/- chr9:89645913-89645918 - ENSMUSG00000111274.1 ENSMUST00000214211.1 Transcript non_coding_transcript_exon_variant 544-549 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_89692411_-/TGTGTGTGTGTG chr9:89692410-89692411 TGTGTGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000085248.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000169860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000096976.1 ENSMUST00000181611.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=104;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000187771.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000188905.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1879;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000189089.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=104;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000189420.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000190345.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1879;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000190377.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000191189.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90096006_TT/- chr9:90096006-90096007 - ENSMUSG00000062270.14 ENSMUST00000191353.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1401;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90124290_GG/- chr9:90124290-90124291 - ENSMUSG00000096647.2 ENSMUST00000178436.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4483;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_90149156_AA/- chr9:90149156-90149157 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_91314068_-/A chr9:91314067-91314068 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_91316200_A/- chr9:91316200 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_91971963_-/TTTTTTT chr9:91971962-91971963 TTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_92400592_A/C chr9:92400592 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_92678310_TGTG/- chr9:92678310-92678313 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93045806_AA/-/A/AAA chr9:93045806-93045807 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93045806_AA/-/A/AAA chr9:93045806-93045807 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93045806_AA/-/A/AAA chr9:93045806-93045807 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93351504_GTGT/-/GT chr9:93351504-93351507 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93351504_GTGT/-/GT chr9:93351504-93351507 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93495717_T/A chr9:93495717 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93683751_G/C chr9:93683751 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93760668_A/- chr9:93760668 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93911023_G/T chr9:93911023 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93999980_TATA/-/TATATA chr9:93999980-93999983 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_93999980_TATA/-/TATATA chr9:93999980-93999983 TATATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_94097999_TTT/- chr9:94097999-94098001 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_94190149_AGAG/-/AG chr9:94190149-94190152 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_94190149_AGAG/-/AG chr9:94190149-94190152 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_95292096_A/G chr9:95292096 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_95292134_G/A chr9:95292134 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_97049512_TGTGTG/- chr9:97049512-97049517 - ENSMUSG00000101365.1 ENSMUST00000186238.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_97925740_AA/- chr9:97925740-97925741 - ENSMUSG00000032452.12 ENSMUST00000035027.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_97925740_AA/- chr9:97925740-97925741 - ENSMUSG00000032452.12 ENSMUST00000162295.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_97925740_AA/- chr9:97925740-97925741 - ENSMUSG00000104462.1 ENSMUST00000191863.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2865;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_98377718_C/T chr9:98377718 T ENSMUSG00000032456.13 ENSMUST00000112935.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_98377718_C/T chr9:98377718 T ENSMUSG00000032456.13 ENSMUST00000112937.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_98377718_C/T chr9:98377718 T ENSMUSG00000032456.13 ENSMUST00000112938.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_98377718_C/T chr9:98377718 T ENSMUSG00000032456.13 ENSMUST00000134253.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_98828707_TCTC/- chr9:98828707-98828710 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_98937183_CACA/- chr9:98937183-98937186 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_99209270_AAA/-/AA chr9:99209270-99209272 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_99209270_AAA/-/AA chr9:99209270-99209272 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_99301439_GTGT/- chr9:99301439-99301442 - ENSMUSG00000056267.14 ENSMUST00000093795.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1035;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_99301439_GTGT/- chr9:99301439-99301442 - ENSMUSG00000056267.14 ENSMUST00000191335.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3454;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_99301439_GTGT/- chr9:99301439-99301442 - ENSMUSG00000100281.1 ENSMUST00000191492.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_99447812_AGAGAGAGAG/-/AGAGAGAG chr9:99447812-99447821 - ENSMUSG00000046242.8 ENSMUST00000163199.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3654;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_99447812_AGAGAGAGAG/-/AGAGAGAG chr9:99447812-99447821 AGAGAGAG ENSMUSG00000046242.8 ENSMUST00000163199.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3654;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_99967406_CACA/- chr9:99967406-99967409 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_99996777_T/- chr9:99996777 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_100095333_AA/-/A chr9:100095333-100095334 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_100095333_AA/-/A chr9:100095333-100095334 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_100481247_AA/-/A chr9:100481247-100481248 - ENSMUSG00000044244.18 ENSMUST00000098458.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100481247_AA/-/A chr9:100481247-100481248 A ENSMUSG00000044244.18 ENSMUST00000098458.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100481247_AA/-/A chr9:100481247-100481248 - ENSMUSG00000044244.18 ENSMUST00000122880.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100481247_AA/-/A chr9:100481247-100481248 A ENSMUSG00000044244.18 ENSMUST00000122880.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100873544_C/A chr9:100873544 A ENSMUSG00000037286.15 ENSMUST00000041418.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100873544_C/A chr9:100873544 A ENSMUSG00000037286.15 ENSMUST00000123302.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100873544_C/A chr9:100873544 A ENSMUSG00000037286.15 ENSMUST00000129269.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100873544_C/A chr9:100873544 A ENSMUSG00000037286.15 ENSMUST00000146934.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100873544_C/A chr9:100873544 A ENSMUSG00000037286.15 ENSMUST00000149771.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100873544_C/A chr9:100873544 A ENSMUSG00000037286.15 ENSMUST00000155108.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_100873544_C/A chr9:100873544 A ENSMUSG00000103624.1 ENSMUST00000193413.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3547;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_101040868_AA/- chr9:101040868-101040869 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_101427587_G/T chr9:101427587 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_102402190_ACAC/- chr9:102402190-102402193 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_102424450_ACAC/- chr9:102424450-102424453 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_103128507_TAGA/- chr9:103128507-103128510 - ENSMUSG00000032549.7 ENSMUST00000035155.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_103128507_TAGA/- chr9:103128507-103128510 - ENSMUSG00000032549.7 ENSMUST00000189134.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_103298316_CA/AG chr9:103298316-103298317 AG ENSMUSG00000033688.10 ENSMUST00000142540.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_103808600_AA/-/A chr9:103808600-103808601 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_103808600_AA/-/A chr9:103808600-103808601 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_103892406_T/A chr9:103892406 A ENSMUSG00000100266.2 ENSMUST00000187540.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3989;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_103892406_T/A chr9:103892406 A ENSMUSG00000099722.3 ENSMUST00000217020.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_105136150_AA/- chr9:105136150-105136151 - ENSMUSG00000032565.9 ENSMUST00000035179.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4326;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_105136150_AA/- chr9:105136150-105136151 - ENSMUSG00000032565.9 ENSMUST00000185533.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4838;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_105136150_AA/- chr9:105136150-105136151 - ENSMUSG00000032565.9 ENSMUST00000186925.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4377;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_105136150_AA/- chr9:105136150-105136151 - ENSMUSG00000032565.9 ENSMUST00000186933.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4331;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_105136150_AA/- chr9:105136150-105136151 - ENSMUSG00000032565.9 ENSMUST00000190375.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4370;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_105861508_CACACA/- chr9:105861508-105861513 - ENSMUSG00000091345.9 ENSMUST00000165165.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_105861508_CACACA/- chr9:105861508-105861513 - ENSMUSG00000091345.9 ENSMUST00000190193.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106163946_AA/-/A chr9:106163946-106163947 - ENSMUSG00000086296.2 ENSMUST00000143956.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4241;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106163946_AA/-/A chr9:106163946-106163947 A ENSMUSG00000086296.2 ENSMUST00000143956.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4241;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106163946_AA/-/A chr9:106163946-106163947 - ENSMUSG00000086296.2 ENSMUST00000150953.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4195;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106163946_AA/-/A chr9:106163946-106163947 A ENSMUSG00000086296.2 ENSMUST00000150953.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4195;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106163946_AA/-/A chr9:106163946-106163947 - ENSMUSG00000086296.2 ENSMUST00000160569.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3745;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106163946_AA/-/A chr9:106163946-106163947 A ENSMUSG00000086296.2 ENSMUST00000160569.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3745;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000024047.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1899;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000187647.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4469;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000187944.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4937;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000188650.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1901;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000189708.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1903;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000216348.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2890;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000216541.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2412;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000216850.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2865;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106217288_TCAT/- chr9:106217288-106217291 - ENSMUSG00000023277.13 ENSMUST00000217523.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2309;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106539109_-/AC chr9:106539108-106539109 AC ENSMUSG00000023577.15 ENSMUST00000062917.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4277;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106539109_-/AC chr9:106539108-106539109 AC ENSMUSG00000023577.15 ENSMUST00000186668.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4686;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106539109_-/AC chr9:106539108-106539109 AC ENSMUSG00000023577.15 ENSMUST00000189866.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106539109_-/AC chr9:106539108-106539109 AC ENSMUSG00000023577.15 ENSMUST00000215525.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_106731817_-/AAGA chr9:106731816-106731817 AAGA ENSMUSG00000040661.6 ENSMUST00000046502.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_107138444_C/T chr9:107138444 T ENSMUSG00000039716.12 ENSMUST00000044532.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_107138444_C/T chr9:107138444 T ENSMUSG00000039716.12 ENSMUST00000165182.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_107138444_C/T chr9:107138444 T ENSMUSG00000039716.12 ENSMUST00000167053.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_107138444_C/T chr9:107138444 T ENSMUSG00000039716.12 ENSMUST00000169164.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_107925164_G/T chr9:107925164 T ENSMUSG00000032584.12 ENSMUST00000035203.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4781;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_107925164_G/T chr9:107925164 T ENSMUSG00000066368.1 ENSMUST00000085073.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3305;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_107925164_G/T chr9:107925164 T ENSMUSG00000032584.12 ENSMUST00000195617.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108308219_A/- chr9:108308219 - ENSMUSG00000007815.13 ENSMUST00000007959.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108308219_A/- chr9:108308219 - ENSMUSG00000039461.12 ENSMUST00000044725.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2229;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108308219_A/- chr9:108308219 - ENSMUSG00000039461.12 ENSMUST00000192886.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2059;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108308219_A/- chr9:108308219 - ENSMUSG00000007815.13 ENSMUST00000193490.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108308219_A/- chr9:108308219 - ENSMUSG00000007815.13 ENSMUST00000193619.1 Transcript non_coding_transcript_exon_variant 1781 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108308219_A/- chr9:108308219 - ENSMUSG00000007815.13 ENSMUST00000194701.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108308219_A/- chr9:108308219 - ENSMUSG00000039461.12 ENSMUST00000195615.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2271;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 - ENSMUSG00000007815.13 ENSMUST00000007959.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4262;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 AG ENSMUSG00000007815.13 ENSMUST00000007959.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4262;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 - ENSMUSG00000063856.7 ENSMUST00000082429.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1853;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 AG ENSMUSG00000063856.7 ENSMUST00000082429.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1853;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 - ENSMUSG00000063856.7 ENSMUST00000191997.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1946;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 AG ENSMUSG00000063856.7 ENSMUST00000191997.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1946;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 - ENSMUSG00000104208.1 ENSMUST00000192053.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3923;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 AG ENSMUSG00000104208.1 ENSMUST00000192053.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3923;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 - ENSMUSG00000063856.7 ENSMUST00000192401.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2394;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 AG ENSMUSG00000063856.7 ENSMUST00000192401.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2394;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 - ENSMUSG00000063856.7 ENSMUST00000193987.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1946;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_108342196_AGAG/-/AG chr9:108342196-108342199 AG ENSMUSG00000063856.7 ENSMUST00000193987.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1946;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109044966_TCTTTCTT/- chr9:109044966-109044973 - ENSMUSG00000025647.16 ENSMUST00000026737.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109044966_TCTTTCTT/- chr9:109044966-109044973 - ENSMUSG00000025647.16 ENSMUST00000112059.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109044966_TCTTTCTT/- chr9:109044966-109044973 - ENSMUSG00000025647.16 ENSMUST00000197099.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109044966_TCTTTCTT/- chr9:109044966-109044973 - ENSMUSG00000025647.16 ENSMUST00000198281.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109044966_TCTTTCTT/- chr9:109044966-109044973 - ENSMUSG00000025647.16 ENSMUST00000198639.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109337796_AGAG/- chr9:109337796-109337799 - ENSMUSG00000054087.11 ENSMUST00000112039.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109337796_AGAG/- chr9:109337796-109337799 - ENSMUSG00000054087.11 ENSMUST00000112040.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109337796_AGAG/- chr9:109337796-109337799 - ENSMUSG00000054087.11 ENSMUST00000196351.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109337796_AGAG/- chr9:109337796-109337799 - ENSMUSG00000054087.11 ENSMUST00000200156.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109733824_-/AAAAAAAAAAAA chr9:109733823-109733824 AAAAAAAAAAAA ENSMUSG00000059547.3 ENSMUST00000071917.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_109916719_-/A chr9:109916718-109916719 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_109918943_TCGT/- chr9:109918943-109918946 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_110418677_AAAA/- chr9:110418677-110418680 - ENSMUSG00000032484.8 ENSMUST00000035061.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1067;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_110911617_GTGTGT/- chr9:110911617-110911622 - ENSMUSG00000096393.1 ENSMUST00000177678.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3117;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111105306_CT/- chr9:111105306-111105307 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000035078.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000035078.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000035078.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000098340.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000098340.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000098340.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000196981.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000196981.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000196981.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000197241.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000197241.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000197241.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000197256.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000197256.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000197256.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000197540.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000197540.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000197540.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000198127.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000198127.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000198127.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000198986.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000198986.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000198986.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000200094.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000200094.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000200094.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000216430.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000216430.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000216430.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000217117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000217117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000217117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 - ENSMUSG00000032497.17 ENSMUST00000217341.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 T ENSMUSG00000032497.17 ENSMUST00000217341.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111200399_TT/-/T/TTT chr9:111200399-111200400 TTT ENSMUSG00000032497.17 ENSMUST00000217341.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111548188_ACAC/-/AC chr9:111548188-111548191 - ENSMUSG00000106647.1 ENSMUST00000199378.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_111548188_ACAC/-/AC chr9:111548188-111548191 AC ENSMUSG00000106647.1 ENSMUST00000199378.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_113145693_ATG/A/GTG chr9:113145693-113145695 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_113145693_ATG/A/GTG chr9:113145693-113145695 GTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_113364242_AA/-/AAA chr9:113364242-113364243 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_113364242_AA/-/AAA chr9:113364242-113364243 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_113570197_AGAGAG/- chr9:113570197-113570202 - ENSMUSG00000109890.2 ENSMUST00000209241.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_113570197_AGAGAG/- chr9:113570197-113570202 - ENSMUSG00000109890.2 ENSMUST00000209897.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114037239_CTCT/-/CT chr9:114037239-114037242 - ENSMUSG00000032507.15 ENSMUST00000141832.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114037239_CTCT/-/CT chr9:114037239-114037242 CT ENSMUSG00000032507.15 ENSMUST00000141832.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114380754_ATAT/- chr9:114380754-114380757 - ENSMUSG00000032431.6 ENSMUST00000084881.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114380754_ATAT/- chr9:114380754-114380757 - ENSMUSG00000074039.10 ENSMUST00000124664.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3525;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114380754_ATAT/- chr9:114380754-114380757 - ENSMUSG00000074039.10 ENSMUST00000147689.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4308;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114380754_ATAT/- chr9:114380754-114380757 - ENSMUSG00000032431.6 ENSMUST00000151377.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2533;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114418664_T/C chr9:114418664 C ENSMUSG00000045594.10 ENSMUST00000063042.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_114418664_T/C chr9:114418664 C ENSMUSG00000045594.10 ENSMUST00000217583.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_115065285_T/C chr9:115065285 C ENSMUSG00000040875.12 ENSMUST00000046627.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1994;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_115065285_T/C chr9:115065285 C ENSMUSG00000040875.12 ENSMUST00000182199.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_115065285_T/C chr9:115065285 C ENSMUSG00000040875.12 ENSMUST00000182384.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_115065285_T/C chr9:115065285 C ENSMUSG00000040875.12 ENSMUST00000182920.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_115065285_T/C chr9:115065285 C ENSMUSG00000040875.12 ENSMUST00000183104.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_115065285_T/C chr9:115065285 C ENSMUSG00000040875.12 ENSMUST00000183141.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116145158_TG/CA chr9:116145158-116145159 CA ENSMUSG00000032440.13 ENSMUST00000035014.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116145158_TG/CA chr9:116145158-116145159 CA ENSMUSG00000032440.13 ENSMUST00000061101.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116145174_TG/CA chr9:116145174-116145175 CA ENSMUSG00000032440.13 ENSMUST00000035014.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116145174_TG/CA chr9:116145174-116145175 CA ENSMUSG00000032440.13 ENSMUST00000061101.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116241068_-/ACAC chr9:116241067-116241068 ACAC ENSMUSG00000111324.1 ENSMUST00000217302.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116550419_TGTG/- chr9:116550419-116550422 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000044901.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000068962.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000069095.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000111772.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000111773.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000164018.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000172469.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000173429.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116780562_G/C chr9:116780562 C ENSMUSG00000039607.15 ENSMUST00000174868.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000044901.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000068962.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000069095.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000084824.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000111772.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000111773.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000164018.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000172564.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000174276.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116969289_CACA/- chr9:116969289-116969292 - ENSMUSG00000039607.15 ENSMUST00000174868.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000044901.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000068962.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000069095.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000084824.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000111772.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000111773.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000164018.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000172564.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000174276.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_116988556_C/T chr9:116988556 T ENSMUSG00000039607.15 ENSMUST00000174868.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000044901.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000044901.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000068962.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000068962.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000069095.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000069095.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000084824.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000084824.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000111772.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000111772.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000111773.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000111773.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000164018.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000164018.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000172564.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000172564.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000174276.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000174276.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 - ENSMUSG00000039607.15 ENSMUST00000174868.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117212535_TGTG/-/TG chr9:117212535-117212538 TG ENSMUSG00000039607.15 ENSMUST00000174868.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117479564_AA/- chr9:117479564-117479565 - ENSMUSG00000039607.15 ENSMUST00000164018.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117487177_C/T chr9:117487177 T ENSMUSG00000039607.15 ENSMUST00000164018.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_117788846_TCTCTC/- chr9:117788846-117788851 - ENSMUSG00000110408.1 ENSMUST00000210659.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_118290894_G/A chr9:118290894 A ENSMUSG00000084608.1 ENSMUST00000122659.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2802;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_118858811_A/C chr9:118858811 C ENSMUSG00000039115.13 ENSMUST00000044165.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_118858811_A/C chr9:118858811 C ENSMUSG00000039115.13 ENSMUST00000124360.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_118858811_A/C chr9:118858811 C ENSMUSG00000039115.13 ENSMUST00000124422.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119094072_G/T chr9:119094072 T ENSMUSG00000010660.3 ENSMUST00000010804.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119094072_G/T chr9:119094072 T ENSMUSG00000010660.3 ENSMUST00000213464.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119187196_ACAC/-/AC chr9:119187196-119187199 - ENSMUSG00000070280.13 ENSMUST00000093775.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119187196_ACAC/-/AC chr9:119187196-119187199 AC ENSMUSG00000070280.13 ENSMUST00000093775.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119187196_ACAC/-/AC chr9:119187196-119187199 - ENSMUSG00000070280.13 ENSMUST00000127794.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119187196_ACAC/-/AC chr9:119187196-119187199 AC ENSMUSG00000070280.13 ENSMUST00000127794.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119187196_ACAC/-/AC chr9:119187196-119187199 - ENSMUSG00000070280.13 ENSMUST00000170400.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119187196_ACAC/-/AC chr9:119187196-119187199 AC ENSMUSG00000070280.13 ENSMUST00000170400.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119332229_AA/- chr9:119332229-119332230 - ENSMUSG00000032508.8 ENSMUST00000035092.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3704;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119332229_AA/- chr9:119332229-119332230 - ENSMUSG00000032508.8 ENSMUST00000150837.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3716;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_119332229_AA/- chr9:119332229-119332230 - ENSMUSG00000070280.13 ENSMUST00000170400.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032518.6 ENSMUST00000035105.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=132;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032519.11 ENSMUST00000035106.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3053;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000064380.1 ENSMUST00000082446.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1794;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000064925.1 ENSMUST00000082991.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2858;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000065041.1 ENSMUST00000083107.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1223;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032519.11 ENSMUST00000144768.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3906;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032518.6 ENSMUST00000215568.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1249;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032518.6 ENSMUST00000216813.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=245;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032518.6 ENSMUST00000217317.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032518.6 ENSMUST00000217352.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2561;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120127557_T/C chr9:120127557 C ENSMUSG00000032518.6 ENSMUST00000217356.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=232;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120455474_CACA/-/CA chr9:120455474-120455477 - ENSMUSG00000041794.13 ENSMUST00000048121.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_120455474_CACA/-/CA chr9:120455474-120455477 CA ENSMUSG00000041794.13 ENSMUST00000048121.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000032526.11 ENSMUST00000035113.10 Transcript 5_prime_UTR_variant 57-58 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000061536.13 ENSMUST00000154978.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4895;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000032526.11 ENSMUST00000213768.1 Transcript non_coding_transcript_exon_variant 1-2 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000032526.11 ENSMUST00000214535.1 Transcript non_coding_transcript_exon_variant 21-22 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000061536.13 ENSMUST00000214595.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4920;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000032526.11 ENSMUST00000215104.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=14;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000032526.11 ENSMUST00000215833.1 Transcript 5_prime_UTR_variant 14-15 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000032526.11 ENSMUST00000215966.1 Transcript 5_prime_UTR_variant 40-41 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_121710386_-/T chr9:121710385-121710386 T ENSMUSG00000032526.11 ENSMUST00000217579.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=81;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122024984_A/G chr9:122024984 G ENSMUSG00000111389.1 ENSMUST00000213810.1 Transcript non_coding_transcript_exon_variant 4357 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122024984_A/G chr9:122024984 G ENSMUSG00000111389.1 ENSMUST00000215177.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122024992_C/G chr9:122024992 G ENSMUSG00000111389.1 ENSMUST00000213810.1 Transcript non_coding_transcript_exon_variant 4349 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122024992_C/G chr9:122024992 G ENSMUSG00000111389.1 ENSMUST00000215177.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122151269_TTTTTT/- chr9:122151269-122151274 - ENSMUSG00000038145.17 ENSMUST00000118886.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122151269_TTTTTT/- chr9:122151269-122151274 - ENSMUSG00000038145.17 ENSMUST00000119215.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122151269_TTTTTT/- chr9:122151269-122151274 - ENSMUSG00000038145.17 ENSMUST00000120173.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122151269_TTTTTT/- chr9:122151269-122151274 - ENSMUSG00000038145.17 ENSMUST00000134949.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122151269_TTTTTT/- chr9:122151269-122151274 - ENSMUSG00000038145.17 ENSMUST00000217631.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122584280_G/A chr9:122584280 A ENSMUSG00000097736.8 ENSMUST00000181107.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3633;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122584280_G/A chr9:122584280 A ENSMUSG00000097736.8 ENSMUST00000181682.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122584280_G/A chr9:122584280 A ENSMUSG00000097736.8 ENSMUST00000181719.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_122584280_G/A chr9:122584280 A ENSMUSG00000097736.8 ENSMUST00000215759.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr9_123926236_A/G chr9:123926236 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr9_123926238_A/G chr9:123926238 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_4026959_A/G chr10:4026959 G ENSMUSG00000040675.17 ENSMUST00000043735.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4026959_A/G chr10:4026959 G ENSMUSG00000040675.17 ENSMUST00000117291.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4026959_A/G chr10:4026959 G ENSMUSG00000040675.17 ENSMUST00000120585.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4396461_GAGA/- chr10:4396461-4396464 - ENSMUSG00000095123.1 ENSMUST00000178920.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=37;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4769738_TCTA/- chr10:4769738-4769741 - ENSMUSG00000019768.16 ENSMUST00000067086.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4769738_TCTA/- chr10:4769738-4769741 - ENSMUSG00000019768.16 ENSMUST00000105588.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4769738_TCTA/- chr10:4769738-4769741 - ENSMUSG00000019768.16 ENSMUST00000105589.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4769738_TCTA/- chr10:4769738-4769741 - ENSMUSG00000019768.16 ENSMUST00000105590.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4769738_TCTA/- chr10:4769738-4769741 - ENSMUSG00000019768.16 ENSMUST00000127145.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4769738_TCTA/- chr10:4769738-4769741 - ENSMUSG00000019768.16 ENSMUST00000138828.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_4769738_TCTA/- chr10:4769738-4769741 - ENSMUSG00000019768.16 ENSMUST00000149195.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_5009947_ACAC/- chr10:5009947-5009950 - ENSMUSG00000019768.16 ENSMUST00000105590.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4333;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_5183937_GTGT/- chr10:5183937-5183940 - ENSMUSG00000096054.3 ENSMUST00000215295.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_5183937_GTGT/- chr10:5183937-5183940 - ENSMUSG00000096054.3 ENSMUST00000215467.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_5183937_GTGT/- chr10:5183937-5183940 - ENSMUSG00000096054.3 ENSMUST00000217592.1 Transcript non_coding_transcript_exon_variant 1587-1590 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_5500821_TCTC/- chr10:5500821-5500824 - ENSMUSG00000096054.3 ENSMUST00000041639.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_5500821_TCTC/- chr10:5500821-5500824 - ENSMUSG00000096054.3 ENSMUST00000214945.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_5500821_TCTC/- chr10:5500821-5500824 - ENSMUSG00000096054.3 ENSMUST00000215295.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6140915_TT/-/T chr10:6140915-6140916 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_6140915_TT/-/T chr10:6140915-6140916 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000000783.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000000783.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000052751.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000052751.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000056385.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000056385.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000063036.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000063036.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000078634.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2568;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000078634.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2568;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000092729.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000092729.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000092731.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000092731.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000092734.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000092734.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105597.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105597.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105601.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105601.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105602.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4916;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105602.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4916;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105603.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2762;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105603.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2762;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105604.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105604.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105605.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105605.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105607.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105607.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105611.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105611.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000105615.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000105615.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000123861.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000123861.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000129221.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000129221.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000129954.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000129954.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000135502.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000135502.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000141897.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000141897.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000144264.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000144264.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000147171.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000147171.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000148625.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000148625.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000150374.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000150374.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000152674.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000152674.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000154906.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000154906.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 - ENSMUSG00000000766.18 ENSMUST00000154941.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6835555_TGTG/-/TG chr10:6835555-6835558 TG ENSMUSG00000000766.18 ENSMUST00000154941.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000052751.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000063036.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000064065.15 ENSMUST00000078070.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000105601.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000105611.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000105615.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000064065.15 ENSMUST00000105617.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000123861.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000129221.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000129954.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000135502.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000141897.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000144264.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000147171.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_6896062_CTCT/- chr10:6896062-6896065 - ENSMUSG00000000766.18 ENSMUST00000154941.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_7117138_AA/- chr10:7117138-7117139 - ENSMUSG00000015202.13 ENSMUST00000015346.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1924;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_7117138_AA/- chr10:7117138-7117139 - ENSMUSG00000015202.13 ENSMUST00000150282.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1924;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_7198720_GT/- chr10:7198720-7198721 - ENSMUSG00000015202.13 ENSMUST00000015346.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8144559_A/T chr10:8144559 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_8269529_CACACA/-/CACA chr10:8269529-8269534 - ENSMUSG00000047712.8 ENSMUST00000061601.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8269529_CACACA/-/CACA chr10:8269529-8269534 CACA ENSMUSG00000047712.8 ENSMUST00000061601.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8269529_CACACA/-/CACA chr10:8269529-8269534 - ENSMUSG00000047712.8 ENSMUST00000219116.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8269529_CACACA/-/CACA chr10:8269529-8269534 CACA ENSMUSG00000047712.8 ENSMUST00000219116.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8407302_TGTG/- chr10:8407302-8407305 - ENSMUSG00000047712.8 ENSMUST00000061601.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8726826_TT/-/T chr10:8726826-8726827 - ENSMUSG00000015305.6 ENSMUST00000015449.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8726826_TT/-/T chr10:8726826-8726827 T ENSMUSG00000015305.6 ENSMUST00000015449.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8796727_GTGT/-/GT chr10:8796727-8796730 - ENSMUSG00000015305.6 ENSMUST00000015449.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_8796727_GTGT/-/GT chr10:8796727-8796730 GT ENSMUSG00000015305.6 ENSMUST00000015449.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_9075486_TCTC/-/TC chr10:9075486-9075489 - ENSMUSG00000111077.1 ENSMUST00000216441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4011;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_9075486_TCTC/-/TC chr10:9075486-9075489 TC ENSMUSG00000111077.1 ENSMUST00000216441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4011;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_9209681_-/TGTGTGTG chr10:9209680-9209681 TGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_11042847_AA/-/AAA chr10:11042847-11042848 - ENSMUSG00000019828.13 ENSMUST00000044306.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11042847_AA/-/AAA chr10:11042847-11042848 AAA ENSMUSG00000019828.13 ENSMUST00000044306.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11042847_AA/-/AAA chr10:11042847-11042848 - ENSMUSG00000019828.13 ENSMUST00000105560.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11042847_AA/-/AAA chr10:11042847-11042848 AAA ENSMUSG00000019828.13 ENSMUST00000105560.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11042847_AA/-/AAA chr10:11042847-11042848 - ENSMUSG00000019828.13 ENSMUST00000105561.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11042847_AA/-/AAA chr10:11042847-11042848 AAA ENSMUSG00000019828.13 ENSMUST00000105561.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11045479_C/G chr10:11045479 G ENSMUSG00000019828.13 ENSMUST00000044306.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11045479_C/G chr10:11045479 G ENSMUSG00000019828.13 ENSMUST00000105560.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_11045479_C/G chr10:11045479 G ENSMUSG00000019828.13 ENSMUST00000105561.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_12380307_-/A chr10:12380306-12380307 A ENSMUSG00000019820.11 ENSMUST00000076817.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1881;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_12380307_-/A chr10:12380306-12380307 A ENSMUSG00000019820.11 ENSMUST00000217994.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3881;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_12380307_-/A chr10:12380306-12380307 A ENSMUSG00000019820.11 ENSMUST00000218635.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3073;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_12380307_-/A chr10:12380306-12380307 A ENSMUSG00000019820.11 ENSMUST00000219003.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1883;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_12908908_AAAA/- chr10:12908908-12908911 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_12918953_-/T chr10:12918952-12918953 T ENSMUSG00000097378.8 ENSMUST00000180529.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_12918953_-/T chr10:12918952-12918953 T ENSMUSG00000097378.8 ENSMUST00000181073.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_13003791_G/A chr10:13003791 A ENSMUSG00000078348.4 ENSMUST00000105139.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1552;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_13475801_T/A chr10:13475801 A ENSMUSG00000062866.16 ENSMUST00000105545.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1389;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_13893140_T/G chr10:13893140 G ENSMUSG00000096790.1 ENSMUST00000179670.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4497;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_13893140_T/G chr10:13893140 G ENSMUSG00000098048.1 ENSMUST00000182754.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1487;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_14450418_-/TTATTA chr10:14450417-14450418 TTATTA ENSMUSG00000039116.6 ENSMUST00000041168.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_14450418_-/TTATTA chr10:14450417-14450418 TTATTA ENSMUSG00000039116.6 ENSMUST00000208429.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_14495246_G/T chr10:14495246 T ENSMUSG00000039116.6 ENSMUST00000041168.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_14495246_G/T chr10:14495246 T ENSMUSG00000039116.6 ENSMUST00000208429.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_14495246_G/T chr10:14495246 T ENSMUSG00000039116.6 ENSMUST00000208905.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_16208007_TCTC/- chr10:16208007-16208010 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_16217797_AA/-/A/AAA chr10:16217797-16217798 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_16217797_AA/-/A/AAA chr10:16217797-16217798 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_16217797_AA/-/A/AAA chr10:16217797-16217798 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_16454458_TCTC/- chr10:16454458-16454461 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_17079383_CACA/- chr10:17079383-17079386 - ENSMUSG00000101969.2 ENSMUST00000185722.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_17079383_CACA/- chr10:17079383-17079386 - ENSMUSG00000101969.2 ENSMUST00000207720.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_17079383_CACA/- chr10:17079383-17079386 - ENSMUSG00000101969.2 ENSMUST00000208005.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_17079383_CACA/- chr10:17079383-17079386 - ENSMUSG00000101969.2 ENSMUST00000208596.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_17079383_CACA/- chr10:17079383-17079386 - ENSMUSG00000101969.2 ENSMUST00000208870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 - ENSMUSG00000071369.11 ENSMUST00000095806.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CA ENSMUSG00000071369.11 ENSMUST00000095806.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CACACA ENSMUSG00000071369.11 ENSMUST00000095806.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 - ENSMUSG00000071369.11 ENSMUST00000120259.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CA ENSMUSG00000071369.11 ENSMUST00000120259.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CACACA ENSMUSG00000071369.11 ENSMUST00000120259.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 - ENSMUSG00000071369.11 ENSMUST00000129437.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CA ENSMUSG00000071369.11 ENSMUST00000129437.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CACACA ENSMUSG00000071369.11 ENSMUST00000129437.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 - ENSMUSG00000071369.11 ENSMUST00000152533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CA ENSMUSG00000071369.11 ENSMUST00000152533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_19996092_CACA/-/CA/CACACA chr10:19996092-19996095 CACACA ENSMUSG00000071369.11 ENSMUST00000152533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000043881.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000092678.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000069713.2 ENSMUST00000092680.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1077;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000185800.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000186100.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000187338.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000190156.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000215262.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2582;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20313371_TT/- chr10:20313371-20313372 - ENSMUSG00000037608.16 ENSMUST00000216560.1 Transcript non_coding_transcript_exon_variant 840-841 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20404002_TT/- chr10:20404002-20404003 - ENSMUSG00000019990.15 ENSMUST00000020165.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20404002_TT/- chr10:20404002-20404003 - ENSMUSG00000019990.15 ENSMUST00000164195.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3084;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20404002_TT/- chr10:20404002-20404003 - ENSMUSG00000019990.15 ENSMUST00000169016.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20404002_TT/- chr10:20404002-20404003 - ENSMUSG00000019990.15 ENSMUST00000169404.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_20404002_TT/- chr10:20404002-20404003 - ENSMUSG00000019990.15 ENSMUST00000170265.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_21276725_AAAG/- chr10:21276725-21276728 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_21477078_T/A chr10:21477078 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_21886869_CACA/- chr10:21886869-21886872 - ENSMUSG00000019970.15 ENSMUST00000120509.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_21886869_CACA/- chr10:21886869-21886872 - ENSMUSG00000019970.15 ENSMUST00000143094.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_22219966_C/T chr10:22219966 T ENSMUSG00000075297.10 ENSMUST00000105522.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_22219966_C/T chr10:22219966 T ENSMUSG00000053219.15 ENSMUST00000178026.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_22219966_C/T chr10:22219966 T ENSMUSG00000097705.1 ENSMUST00000180456.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_22219966_C/T chr10:22219966 T ENSMUSG00000097053.1 ENSMUST00000181606.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_22219966_C/T chr10:22219966 T ENSMUSG00000097108.1 ENSMUST00000181953.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2725;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_22392788_A/C chr10:22392788 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_22556355_C/T chr10:22556355 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_22564407_C/G chr10:22564407 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_23419890_-/A chr10:23419889-23419890 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_24432056_CACA/- chr10:24432056-24432059 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_24753462_-/A chr10:24753461-24753462 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_24753463_-/AGA chr10:24753462-24753463 AGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_24805646_C/T chr10:24805646 T ENSMUSG00000019989.8 ENSMUST00000020169.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24805646_C/T chr10:24805646 T ENSMUSG00000019989.8 ENSMUST00000217903.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2505;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24805646_C/T chr10:24805646 T ENSMUSG00000019989.8 ENSMUST00000218619.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24805646_C/T chr10:24805646 T ENSMUSG00000019989.8 ENSMUST00000219342.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2505;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24924036_C/T chr10:24924036 T ENSMUSG00000019987.9 ENSMUST00000020161.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24924036_C/T chr10:24924036 T ENSMUSG00000112758.1 ENSMUST00000219852.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3583;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24924036_C/T chr10:24924036 T ENSMUSG00000019987.9 ENSMUST00000220186.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24927808_A/G chr10:24927808 G ENSMUSG00000019987.9 ENSMUST00000020161.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=324;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24927808_A/G chr10:24927808 G ENSMUSG00000112758.1 ENSMUST00000219852.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_24927808_A/G chr10:24927808 G ENSMUSG00000019987.9 ENSMUST00000220186.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=371;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25168758_GG/- chr10:25168758-25168759 - ENSMUSG00000039166.16 ENSMUST00000041984.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1363;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25168758_GG/- chr10:25168758-25168759 - ENSMUSG00000039166.16 ENSMUST00000100012.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=331;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25168758_GG/- chr10:25168758-25168759 - ENSMUSG00000039166.16 ENSMUST00000175979.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=331;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25168758_GG/- chr10:25168758-25168759 - ENSMUSG00000039166.16 ENSMUST00000220347.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1168;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25181123_A/G chr10:25181123 G ENSMUSG00000039166.16 ENSMUST00000041984.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25181123_A/G chr10:25181123 G ENSMUSG00000039166.16 ENSMUST00000100012.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25181123_A/G chr10:25181123 G ENSMUSG00000039166.16 ENSMUST00000175979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25181123_A/G chr10:25181123 G ENSMUSG00000039166.16 ENSMUST00000220347.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25194076_CTCTCT/- chr10:25194076-25194081 - ENSMUSG00000039166.16 ENSMUST00000041984.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25194076_CTCTCT/- chr10:25194076-25194081 - ENSMUSG00000039166.16 ENSMUST00000100012.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25194076_CTCTCT/- chr10:25194076-25194081 - ENSMUSG00000039166.16 ENSMUST00000175979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25194076_CTCTCT/- chr10:25194076-25194081 - ENSMUSG00000039166.16 ENSMUST00000220347.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25201765_-/ATTAT chr10:25201764-25201765 ATTAT ENSMUSG00000039166.16 ENSMUST00000041984.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25201765_-/ATTAT chr10:25201764-25201765 ATTAT ENSMUSG00000039166.16 ENSMUST00000100012.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25201765_-/ATTAT chr10:25201764-25201765 ATTAT ENSMUSG00000039166.16 ENSMUST00000175979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25201765_-/ATTAT chr10:25201764-25201765 ATTAT ENSMUSG00000039166.16 ENSMUST00000220347.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25282317_-/ATGC chr10:25282316-25282317 ATGC ENSMUSG00000039166.16 ENSMUST00000041984.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25282317_-/ATGC chr10:25282316-25282317 ATGC ENSMUSG00000039166.16 ENSMUST00000095779.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25282317_-/ATGC chr10:25282316-25282317 ATGC ENSMUSG00000089048.1 ENSMUST00000158423.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=464;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25282317_-/ATGC chr10:25282316-25282317 ATGC ENSMUSG00000039166.16 ENSMUST00000176231.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1707;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25282317_-/ATGC chr10:25282316-25282317 ATGC ENSMUSG00000039166.16 ENSMUST00000176258.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_25282317_-/ATGC chr10:25282316-25282317 ATGC ENSMUSG00000039166.16 ENSMUST00000177124.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_27360400_G/A chr10:27360400 A ENSMUSG00000019899.16 ENSMUST00000092639.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_27360400_G/A chr10:27360400 A ENSMUSG00000019899.16 ENSMUST00000185839.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_27360400_G/A chr10:27360400 A ENSMUSG00000019899.16 ENSMUST00000186965.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_27360400_G/A chr10:27360400 A ENSMUSG00000019899.16 ENSMUST00000189575.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_27938207_-/AGAT chr10:27938206-27938207 AGAT ENSMUSG00000064208.6 ENSMUST00000077776.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1381;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28559016_G/A chr10:28559016 A ENSMUSG00000019889.10 ENSMUST00000166468.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28559016_G/A chr10:28559016 A ENSMUSG00000019889.10 ENSMUST00000218276.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28559016_G/A chr10:28559016 A ENSMUSG00000019889.10 ENSMUST00000218359.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28559016_G/A chr10:28559016 A ENSMUSG00000019889.10 ENSMUST00000219478.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28559016_G/A chr10:28559016 A ENSMUSG00000019889.10 ENSMUST00000219621.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1135;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28646107_GAGA/- chr10:28646107-28646110 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_28783483_GTGT/- chr10:28783483-28783486 - ENSMUSG00000049109.15 ENSMUST00000056097.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28783483_GTGT/- chr10:28783483-28783486 - ENSMUSG00000049109.15 ENSMUST00000060409.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28783483_GTGT/- chr10:28783483-28783486 - ENSMUSG00000049109.15 ENSMUST00000105516.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28783483_GTGT/- chr10:28783483-28783486 - ENSMUSG00000049109.15 ENSMUST00000159927.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28783483_GTGT/- chr10:28783483-28783486 - ENSMUSG00000049109.15 ENSMUST00000161345.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1437;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28915047_AAAA/-/AAA chr10:28915047-28915050 - ENSMUSG00000090126.1 ENSMUST00000159347.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_28915047_AAAA/-/AAA chr10:28915047-28915050 AAA ENSMUSG00000090126.1 ENSMUST00000159347.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_29041530_GTGT/- chr10:29041530-29041533 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_29061142_TT/- chr10:29061142-29061143 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_29759958_A/- chr10:29759958 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_33077804_AA/- chr10:33077804-33077805 - ENSMUSG00000019787.9 ENSMUST00000219982.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2749;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_33217998_AA/- chr10:33217998-33217999 - ENSMUSG00000019787.9 ENSMUST00000095762.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_33217998_AA/- chr10:33217998-33217999 - ENSMUSG00000112707.1 ENSMUST00000217716.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4346;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_33217998_AA/- chr10:33217998-33217999 - ENSMUSG00000019787.9 ENSMUST00000219211.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_33217998_AA/- chr10:33217998-33217999 - ENSMUSG00000019787.9 ENSMUST00000219665.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_33217998_AA/- chr10:33217998-33217999 - ENSMUSG00000019787.9 ENSMUST00000219931.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_34525634_AA/- chr10:34525634-34525635 - ENSMUSG00000019779.15 ENSMUST00000019913.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_34525634_AA/- chr10:34525634-34525635 - ENSMUSG00000019779.15 ENSMUST00000170771.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_34525634_AA/- chr10:34525634-34525635 - ENSMUSG00000019779.15 ENSMUST00000215594.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_35692521_A/G chr10:35692521 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_36162954_C/A chr10:36162954 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_36246739_AGT/A/TGT chr10:36246739-36246741 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_36246739_AGT/A/TGT chr10:36246739-36246741 TGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_36374906_GG/- chr10:36374906-36374907 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_36411320_ATAT/- chr10:36411320-36411323 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_36537738_TT/-/TTT chr10:36537738-36537739 - ENSMUSG00000044499.11 ENSMUST00000058738.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 TTT ENSMUSG00000044499.11 ENSMUST00000058738.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 - ENSMUSG00000044499.11 ENSMUST00000167191.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 TTT ENSMUSG00000044499.11 ENSMUST00000167191.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 - ENSMUSG00000044499.11 ENSMUST00000168572.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 TTT ENSMUSG00000044499.11 ENSMUST00000168572.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 - ENSMUSG00000044499.11 ENSMUST00000171521.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 TTT ENSMUSG00000044499.11 ENSMUST00000171521.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 - ENSMUSG00000044499.11 ENSMUST00000172357.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36537738_TT/-/TTT chr10:36537738-36537739 TTT ENSMUSG00000044499.11 ENSMUST00000172357.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36554652_ACAC/- chr10:36554652-36554655 - ENSMUSG00000044499.11 ENSMUST00000058738.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36554652_ACAC/- chr10:36554652-36554655 - ENSMUSG00000044499.11 ENSMUST00000167191.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36554652_ACAC/- chr10:36554652-36554655 - ENSMUSG00000044499.11 ENSMUST00000168572.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36554652_ACAC/- chr10:36554652-36554655 - ENSMUSG00000044499.11 ENSMUST00000171521.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_36554652_ACAC/- chr10:36554652-36554655 - ENSMUSG00000044499.11 ENSMUST00000172357.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_37287625_C/T chr10:37287625 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_38064511_TGTG/- chr10:38064511-38064514 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_38835405_-/GTGTGTGTGTGTGTGTGTGTGTGTGTGT chr10:38835404-38835405 GTGTGTGTGTGTGTGTGTGTGTGTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_39109851_C/T chr10:39109851 T ENSMUSG00000019846.11 ENSMUST00000019992.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_39109851_C/T chr10:39109851 T ENSMUSG00000019846.11 ENSMUST00000163036.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_39197244_CTCT/- chr10:39197244-39197247 - ENSMUSG00000111877.1 ENSMUST00000217098.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1291;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_40201313_TT/-/T chr10:40201313-40201314 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_40201313_TT/-/T chr10:40201313-40201314 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_40466231_A/G chr10:40466231 G ENSMUSG00000038481.13 ENSMUST00000044672.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_40466231_A/G chr10:40466231 G ENSMUSG00000038481.13 ENSMUST00000095743.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_40466231_A/G chr10:40466231 G ENSMUSG00000038481.13 ENSMUST00000214659.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_40466231_A/G chr10:40466231 G ENSMUSG00000038481.13 ENSMUST00000215000.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_40466231_A/G chr10:40466231 G ENSMUSG00000038481.13 ENSMUST00000216736.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_40814417_G/A chr10:40814417 A ENSMUSG00000045555.3 ENSMUST00000058747.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3334;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_41407111_TGTGTG/- chr10:41407111-41407116 - ENSMUSG00000091415.5 ENSMUST00000173494.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_41407111_TGTGTG/- chr10:41407111-41407116 - ENSMUSG00000098818.1 ENSMUST00000183534.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1057;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_41407111_TGTGTG/- chr10:41407111-41407116 - ENSMUSG00000111315.1 ENSMUST00000214384.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3280;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_41695593_C/T chr10:41695593 T ENSMUSG00000075225.14 ENSMUST00000019955.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_41695593_C/T chr10:41695593 T ENSMUSG00000075225.14 ENSMUST00000099932.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_41695593_C/T chr10:41695593 T ENSMUSG00000075225.14 ENSMUST00000189488.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_41695593_C/T chr10:41695593 T ENSMUSG00000075225.14 ENSMUST00000190522.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1106;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 - ENSMUSG00000048756.11 ENSMUST00000056974.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 CA ENSMUSG00000048756.11 ENSMUST00000056974.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 - ENSMUSG00000048756.11 ENSMUST00000105501.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 CA ENSMUSG00000048756.11 ENSMUST00000105501.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 - ENSMUSG00000048756.11 ENSMUST00000105502.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 CA ENSMUSG00000048756.11 ENSMUST00000105502.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 - ENSMUSG00000048756.11 ENSMUST00000175881.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 CA ENSMUSG00000048756.11 ENSMUST00000175881.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 - ENSMUSG00000048756.11 ENSMUST00000177542.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42252091_CACA/-/CA chr10:42252091-42252094 CA ENSMUSG00000048756.11 ENSMUST00000177542.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_42296247_A/T chr10:42296247 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_42296273_A/C chr10:42296273 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_43254396_AAGG/- chr10:43254396-43254399 - ENSMUSG00000038240.13 ENSMUST00000095725.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_43254396_AAGG/- chr10:43254396-43254399 - ENSMUSG00000038240.13 ENSMUST00000159139.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_43254396_AAGG/- chr10:43254396-43254399 - ENSMUSG00000038240.13 ENSMUST00000160108.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_43254396_AAGG/- chr10:43254396-43254399 - ENSMUSG00000038240.13 ENSMUST00000160823.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_43254396_AAGG/- chr10:43254396-43254399 - ENSMUSG00000038240.13 ENSMUST00000162758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_43547668_T/A chr10:43547668 A ENSMUSG00000111368.1 ENSMUST00000216546.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_44157856_ACAC/- chr10:44157856-44157859 - ENSMUSG00000111122.1 ENSMUST00000213468.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2966;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_44900669_TATA/-/TA chr10:44900669-44900672 - ENSMUSG00000110898.1 ENSMUST00000216422.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1886;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_44900669_TATA/-/TA chr10:44900669-44900672 TA ENSMUSG00000110898.1 ENSMUST00000216422.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1886;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_44905740_C/T chr10:44905740 T ENSMUSG00000110898.1 ENSMUST00000216422.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45096955_C/A chr10:45096955 A ENSMUSG00000019849.11 ENSMUST00000099858.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45096955_C/A chr10:45096955 A ENSMUSG00000077082.1 ENSMUST00000103894.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1247;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45243834_TGTGTG/- chr10:45243834-45243839 - ENSMUSG00000098418.1 ENSMUST00000157398.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3248;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45243834_TGTGTG/- chr10:45243834-45243839 - ENSMUSG00000019848.14 ENSMUST00000175658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45297641_AA/- chr10:45297641-45297642 - ENSMUSG00000019848.14 ENSMUST00000019994.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45297641_AA/- chr10:45297641-45297642 - ENSMUSG00000019848.14 ENSMUST00000161803.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45297641_AA/- chr10:45297641-45297642 - ENSMUSG00000019848.14 ENSMUST00000175658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45297641_AA/- chr10:45297641-45297642 - ENSMUSG00000111526.1 ENSMUST00000213575.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=167;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45474143_AAAAA/- chr10:45474143-45474147 - ENSMUSG00000063804.8 ENSMUST00000079390.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3942;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45474143_AAAAA/- chr10:45474143-45474147 - ENSMUSG00000063804.8 ENSMUST00000214555.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45474143_AAAAA/- chr10:45474143-45474147 - ENSMUSG00000063804.8 ENSMUST00000215708.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45605233_TG/- chr10:45605233-45605234 - ENSMUSG00000038822.15 ENSMUST00000037044.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45605233_TG/- chr10:45605233-45605234 - ENSMUSG00000038822.15 ENSMUST00000131568.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45605233_TG/- chr10:45605233-45605234 - ENSMUSG00000038822.15 ENSMUST00000136905.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_45605233_TG/- chr10:45605233-45605234 - ENSMUSG00000038822.15 ENSMUST00000142956.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_46094466_TT/- chr10:46094466-46094467 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_46405655_GG/-/G/GGG chr10:46405655-46405656 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_46405655_GG/-/G/GGG chr10:46405655-46405656 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_46405655_GG/-/G/GGG chr10:46405655-46405656 GGG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_46647134_GTGTGT/-/GTGT chr10:46647134-46647139 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_46647134_GTGTGT/-/GTGT chr10:46647134-46647139 GTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_47938091_C/A chr10:47938091 A ENSMUSG00000112917.1 ENSMUST00000218293.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3750;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_47971858_T/C chr10:47971858 C ENSMUSG00000111911.1 ENSMUST00000218907.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1573;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_47971863_T/C chr10:47971863 C ENSMUSG00000111911.1 ENSMUST00000218907.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1568;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_48103353_C/T chr10:48103353 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_48949686_-/A chr10:48949685-48949686 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 - ENSMUSG00000056073.16 ENSMUST00000079751.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 TCTC ENSMUSG00000056073.16 ENSMUST00000079751.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 - ENSMUSG00000056073.16 ENSMUST00000105484.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 TCTC ENSMUSG00000056073.16 ENSMUST00000105484.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 - ENSMUSG00000056073.16 ENSMUST00000218441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4509;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 TCTC ENSMUSG00000056073.16 ENSMUST00000218441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4509;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 - ENSMUSG00000111934.1 ENSMUST00000218448.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=904;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 TCTC ENSMUSG00000111934.1 ENSMUST00000218448.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=904;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 - ENSMUSG00000056073.16 ENSMUST00000218598.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 TCTC ENSMUSG00000056073.16 ENSMUST00000218598.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 - ENSMUSG00000056073.16 ENSMUST00000218823.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 TCTC ENSMUSG00000056073.16 ENSMUST00000218823.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 - ENSMUSG00000056073.16 ENSMUST00000220263.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_49787918_TCTCTC/-/TCTC chr10:49787918-49787923 TCTC ENSMUSG00000056073.16 ENSMUST00000220263.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50304519_ATAT/-/ATATAT chr10:50304519-50304522 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_50304519_ATAT/-/ATATAT chr10:50304519-50304522 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_50666268_TT/- chr10:50666268-50666269 - ENSMUSG00000038774.9 ENSMUST00000035606.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50679396_A/C chr10:50679396 C ENSMUSG00000038774.9 ENSMUST00000035606.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50757738_AA/-/A chr10:50757738-50757739 - ENSMUSG00000038774.9 ENSMUST00000035606.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50757738_AA/-/A chr10:50757738-50757739 A ENSMUSG00000038774.9 ENSMUST00000035606.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50757738_AA/-/A chr10:50757738-50757739 - ENSMUSG00000038774.9 ENSMUST00000219172.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50757738_AA/-/A chr10:50757738-50757739 A ENSMUSG00000038774.9 ENSMUST00000219172.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50757738_AA/-/A chr10:50757738-50757739 - ENSMUSG00000112918.1 ENSMUST00000220079.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=445;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50757738_AA/-/A chr10:50757738-50757739 A ENSMUSG00000112918.1 ENSMUST00000220079.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=445;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50960341_TC/T/CC chr10:50960341-50960342 T ENSMUSG00000019913.4 ENSMUST00000020071.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_50960341_TC/T/CC chr10:50960341-50960342 CC ENSMUSG00000019913.4 ENSMUST00000020071.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_51192889_-/AC chr10:51192888-51192889 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_52214110_A/- chr10:52214110 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_52285203_AGAG/- chr10:52285203-52285206 - ENSMUSG00000019891.15 ENSMUST00000069004.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52285203_AGAG/- chr10:52285203-52285206 - ENSMUSG00000019891.15 ENSMUST00000218278.1 Transcript non_coding_transcript_exon_variant 1517-1520 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52285203_AGAG/- chr10:52285203-52285206 - ENSMUSG00000019891.15 ENSMUST00000218582.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52293170_TA/T/AA chr10:52293170-52293171 T ENSMUSG00000019891.15 ENSMUST00000069004.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52293170_TA/T/AA chr10:52293170-52293171 AA ENSMUSG00000019891.15 ENSMUST00000069004.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52293170_TA/T/AA chr10:52293170-52293171 T ENSMUSG00000019891.15 ENSMUST00000218278.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52293170_TA/T/AA chr10:52293170-52293171 AA ENSMUSG00000019891.15 ENSMUST00000218278.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4625;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52293170_TA/T/AA chr10:52293170-52293171 T ENSMUSG00000019891.15 ENSMUST00000218582.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52293170_TA/T/AA chr10:52293170-52293171 AA ENSMUSG00000019891.15 ENSMUST00000218582.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52318586_TCTC/- chr10:52318586-52318589 - ENSMUSG00000019891.15 ENSMUST00000069004.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52318586_TCTC/- chr10:52318586-52318589 - ENSMUSG00000019891.15 ENSMUST00000218582.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52865398_-/TG chr10:52865397-52865398 TG ENSMUSG00000038602.7 ENSMUST00000105473.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_52951027_C/T chr10:52951027 T ENSMUSG00000038602.7 ENSMUST00000105473.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_53401861_-/TAGA chr10:53401860-53401861 TAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_53844192_TCTC/- chr10:53844192-53844195 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_53878578_GA/TT chr10:53878578-53878579 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_54868134_A/C chr10:54868134 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_55514984_A/- chr10:55514984 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_55763807_GAC/ATT chr10:55763807-55763809 ATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_55763828_C/T chr10:55763828 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_56203142_T/C chr10:56203142 C ENSMUSG00000038122.9 ENSMUST00000099739.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_56203142_T/C chr10:56203142 C ENSMUSG00000038122.9 ENSMUST00000219385.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_56589859_TCTC/- chr10:56589859-56589862 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_56860301_G/T chr10:56860301 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_57048689_T/A chr10:57048689 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_57277927_GTGT/- chr10:57277927-57277930 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_57565844_-/AC chr10:57565843-57565844 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000066028.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000075992.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000095668.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000175852.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000176354.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2870;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000177325.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000177438.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_57725111_-/AC chr10:57725110-57725111 AC ENSMUSG00000019876.15 ENSMUST00000177473.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_59033355_G/A chr10:59033355 A ENSMUSG00000037990.18 ENSMUST00000135526.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_59033355_G/A chr10:59033355 A ENSMUSG00000037990.18 ENSMUST00000153031.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_59899022_TT/- chr10:59899022-59899023 - ENSMUSG00000020109.13 ENSMUST00000020309.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=501;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_59899022_TT/- chr10:59899022-59899023 - ENSMUSG00000020109.13 ENSMUST00000131810.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1008;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_59899022_TT/- chr10:59899022-59899023 - ENSMUSG00000020109.13 ENSMUST00000142819.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2247;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_59899022_TT/- chr10:59899022-59899023 - ENSMUSG00000020109.13 ENSMUST00000146590.7 Transcript 3_prime_UTR_variant 2796-2797 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_59899022_TT/- chr10:59899022-59899023 - ENSMUSG00000020109.13 ENSMUST00000147914.7 Transcript 3_prime_UTR_variant 2761-2762 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_60133097_-/GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr10:60133096-60133097 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA ENSMUSG00000058297.16 ENSMUST00000121820.8 Transcript 3_prime_UTR_variant 3136-3137 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_60133097_-/GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA chr10:60133096-60133097 GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA ENSMUSG00000058297.16 ENSMUST00000165024.2 Transcript 3_prime_UTR_variant 2887-2888 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_60292830_T/- chr10:60292830 - ENSMUSG00000004207.14 ENSMUST00000004316.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_60292830_T/- chr10:60292830 - ENSMUSG00000004207.14 ENSMUST00000105465.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_60292830_T/- chr10:60292830 - ENSMUSG00000004207.14 ENSMUST00000165878.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_60292830_T/- chr10:60292830 - ENSMUSG00000004207.14 ENSMUST00000177779.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_60292830_T/- chr10:60292830 - ENSMUSG00000004207.14 ENSMUST00000179238.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_61396503_-/CTTC chr10:61396502-61396503 CTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000116238.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000130091.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000132926.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000133429.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000134447.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000134877.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000135317.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000136548.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000140383.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000143236.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62368408_C/T chr10:62368408 T ENSMUSG00000037012.18 ENSMUST00000154489.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62395996_-/TT chr10:62395995-62395996 TT ENSMUSG00000020080.8 ENSMUST00000020277.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62395996_-/TT chr10:62395995-62395996 TT ENSMUSG00000020080.8 ENSMUST00000159493.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62412968_CACACA/- chr10:62412968-62412973 - ENSMUSG00000020080.8 ENSMUST00000020277.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62412968_CACACA/- chr10:62412968-62412973 - ENSMUSG00000020080.8 ENSMUST00000159454.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1164;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62412968_CACACA/- chr10:62412968-62412973 - ENSMUSG00000020080.8 ENSMUST00000159579.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3410;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62690522_G/A chr10:62690522 A ENSMUSG00000036923.12 ENSMUST00000126979.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62690522_G/A chr10:62690522 A ENSMUSG00000036923.12 ENSMUST00000133371.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62690522_G/A chr10:62690522 A ENSMUSG00000036923.12 ENSMUST00000148720.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000020074.7 ENSMUST00000020268.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000020074.7 ENSMUST00000020268.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000080469.1 ENSMUST00000116819.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4169;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000080469.1 ENSMUST00000116819.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4169;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000020074.7 ENSMUST00000217940.1 Transcript non_coding_transcript_exon_variant 3177-3178 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000020074.7 ENSMUST00000217940.1 Transcript non_coding_transcript_exon_variant 3177-3178 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000020074.7 ENSMUST00000218437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4615;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000020074.7 ENSMUST00000218437.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4615;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000020074.7 ENSMUST00000218552.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000020074.7 ENSMUST00000218552.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000020074.7 ENSMUST00000218945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000020074.7 ENSMUST00000218945.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000020074.7 ENSMUST00000219441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2685;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000020074.7 ENSMUST00000219441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2685;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 - ENSMUSG00000020074.7 ENSMUST00000219527.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_62769809_TT/-/T chr10:62769809-62769810 T ENSMUSG00000020074.7 ENSMUST00000219527.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63343131_T/A chr10:63343131 A ENSMUSG00000020063.16 ENSMUST00000020257.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4099;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63343131_T/A chr10:63343131 A ENSMUSG00000020063.16 ENSMUST00000105442.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4096;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63343131_T/A chr10:63343131 A ENSMUSG00000020063.16 ENSMUST00000120239.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63343131_T/A chr10:63343131 A ENSMUSG00000020063.16 ENSMUST00000177694.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4099;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63974868_TGTG/- chr10:63974868-63974871 - ENSMUSG00000060843.11 ENSMUST00000075099.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63974868_TGTG/- chr10:63974868-63974871 - ENSMUSG00000042846.8 ENSMUST00000105439.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63974868_TGTG/- chr10:63974868-63974871 - ENSMUSG00000060843.11 ENSMUST00000105440.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63974868_TGTG/- chr10:63974868-63974871 - ENSMUSG00000060843.11 ENSMUST00000105441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63974868_TGTG/- chr10:63974868-63974871 - ENSMUSG00000042846.8 ENSMUST00000131945.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63974868_TGTG/- chr10:63974868-63974871 - ENSMUSG00000060843.11 ENSMUST00000135474.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63990051_T/A chr10:63990051 A ENSMUSG00000060843.11 ENSMUST00000075099.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63990051_T/A chr10:63990051 A ENSMUSG00000042846.8 ENSMUST00000105439.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63990051_T/A chr10:63990051 A ENSMUSG00000060843.11 ENSMUST00000105440.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63990051_T/A chr10:63990051 A ENSMUSG00000060843.11 ENSMUST00000105441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63990051_T/A chr10:63990051 A ENSMUSG00000042846.8 ENSMUST00000131945.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_63990051_T/A chr10:63990051 A ENSMUSG00000060843.11 ENSMUST00000135474.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_64480676_-/TCTT chr10:64480675-64480676 TCTT ENSMUSG00000060843.11 ENSMUST00000075099.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_64480676_-/TCTT chr10:64480675-64480676 TCTT ENSMUSG00000060843.11 ENSMUST00000105440.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_64480676_-/TCTT chr10:64480675-64480676 TCTT ENSMUSG00000060843.11 ENSMUST00000105441.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_65521410_-/CTTTT chr10:65521409-65521410 CTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_65938134_T/C chr10:65938134 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_65938137_C/G chr10:65938137 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_66072671_A/G chr10:66072671 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_66121030_C/T chr10:66121030 T ENSMUSG00000100000.6 ENSMUST00000186036.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_66121030_C/T chr10:66121030 T ENSMUSG00000100000.6 ENSMUST00000188279.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_66121030_C/T chr10:66121030 T ENSMUSG00000100000.6 ENSMUST00000189619.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_66121030_C/T chr10:66121030 T ENSMUSG00000100000.6 ENSMUST00000190260.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_66121030_C/T chr10:66121030 T ENSMUSG00000100000.6 ENSMUST00000191223.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_66490375_-/TC chr10:66490374-66490375 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_66626509_-/TAGA chr10:66626508-66626509 TAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_66806429_-/GATA chr10:66806428-66806429 GATA ENSMUSG00000112425.1 ENSMUST00000220426.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3411;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_66903283_-/TA chr10:66903282-66903283 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_67264008_AAAGA/- chr10:67264008-67264012 - ENSMUSG00000075000.11 ENSMUST00000077839.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2677;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_67264008_AAAGA/- chr10:67264008-67264012 - ENSMUSG00000075000.11 ENSMUST00000159002.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_67520718_ACATAT/- chr10:67520718-67520723 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_67757563_AGAG/- chr10:67757563-67757566 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_67852322_TCTA/- chr10:67852322-67852325 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_68555656_TT/-/T/TTT chr10:68555656-68555657 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_68555656_TT/-/T/TTT chr10:68555656-68555657 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_68555656_TT/-/T/TTT chr10:68555656-68555657 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_69302575_-/AAGA chr10:69302574-69302575 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_70099610_CTCT/- chr10:70099610-70099613 - ENSMUSG00000048701.13 ENSMUST00000147545.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_70400508_AGAG/- chr10:70400508-70400511 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_70769752_ATAG/- chr10:70769752-70769755 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_71077035_T/G chr10:71077035 G ENSMUSG00000014329.14 ENSMUST00000014473.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_71077035_T/G chr10:71077035 G ENSMUSG00000014329.14 ENSMUST00000131445.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_71077035_T/G chr10:71077035 G ENSMUSG00000014329.14 ENSMUST00000143791.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_71669600_G/T chr10:71669600 T ENSMUSG00000112126.1 ENSMUST00000218434.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_71669600_G/T chr10:71669600 T ENSMUSG00000112126.1 ENSMUST00000218514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_71669600_G/T chr10:71669600 T ENSMUSG00000112126.1 ENSMUST00000219004.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=978;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_72183199_GTGT/- chr10:72183199-72183202 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_72249942_A/T/AT chr10:72249942 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_72249942_A/T/AT chr10:72249942 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_73601811_A/G chr10:73601811 G ENSMUSG00000052613.16 ENSMUST00000123398.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_73601811_A/G chr10:73601811 G ENSMUSG00000052613.16 ENSMUST00000148572.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_73803928_-/TCTT chr10:73803927-73803928 TCTT ENSMUSG00000052613.16 ENSMUST00000123398.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000064562.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000092420.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000105424.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000105426.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000105429.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000123398.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000124046.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000125006.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000125055.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000125517.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000126920.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000129404.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000131321.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000131724.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000134009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000136096.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000144302.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000146682.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000147189.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000149977.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000151116.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000152655.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000152819.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000155701.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000177107.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000177420.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000191709.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000191854.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000193174.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000193361.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000193739.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74243422_C/A chr10:74243422 A ENSMUSG00000052613.16 ENSMUST00000195531.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74982047_CTCCCCTCCCCTCCCCTCCCCTCCC/- chr10:74982047-74982071 - ENSMUSG00000009070.14 ENSMUST00000009214.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74982047_CTCCCCTCCCCTCCCCTCCCCTCCC/- chr10:74982047-74982071 - ENSMUSG00000040009.6 ENSMUST00000037813.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74982047_CTCCCCTCCCCTCCCCTCCCCTCCC/- chr10:74982047-74982071 - ENSMUSG00000009070.14 ENSMUST00000160072.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74982047_CTCCCCTCCCCTCCCCTCCCCTCCC/- chr10:74982047-74982071 - ENSMUSG00000040009.6 ENSMUST00000160421.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74982047_CTCCCCTCCCCTCCCCTCCCCTCCC/- chr10:74982047-74982071 - ENSMUSG00000009070.14 ENSMUST00000160450.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74982047_CTCCCCTCCCCTCCCCTCCCCTCCC/- chr10:74982047-74982071 - ENSMUSG00000009070.14 ENSMUST00000166088.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_74982047_CTCCCCTCCCCTCCCCTCCCCTCCC/- chr10:74982047-74982071 - ENSMUSG00000009070.14 ENSMUST00000179546.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75448577_GTGT/- chr10:75448577-75448580 - ENSMUSG00000033416.15 ENSMUST00000145890.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75448577_GTGT/- chr10:75448577-75448580 - ENSMUSG00000033416.15 ENSMUST00000153125.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75660102_TC/- chr10:75660102-75660103 - ENSMUSG00000020196.10 ENSMUST00000001712.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75660102_TC/- chr10:75660102-75660103 - ENSMUSG00000020196.10 ENSMUST00000217664.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75660102_TC/- chr10:75660102-75660103 - ENSMUSG00000020196.10 ENSMUST00000218814.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75669163_ACAC/- chr10:75669163-75669166 - ENSMUSG00000020196.10 ENSMUST00000001712.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75669163_ACAC/- chr10:75669163-75669166 - ENSMUSG00000020196.10 ENSMUST00000217664.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1069;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75669163_ACAC/- chr10:75669163-75669166 - ENSMUSG00000020196.10 ENSMUST00000218814.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1331;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75791324_G/A chr10:75791324 A ENSMUSG00000001663.10 ENSMUST00000001713.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75791324_G/A chr10:75791324 A ENSMUSG00000001663.10 ENSMUST00000120177.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75791324_G/A chr10:75791324 A ENSMUSG00000001663.10 ENSMUST00000139724.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_75883621_C/T chr10:75883621 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_76101515_CC/- chr10:76101515-76101516 - ENSMUSG00000020226.9 ENSMUST00000120757.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_76428966_G/T chr10:76428966 T ENSMUSG00000001151.10 ENSMUST00000001179.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_76428966_G/T chr10:76428966 T ENSMUSG00000001151.10 ENSMUST00000217838.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_76949316_-/A chr10:76949315-76949316 A ENSMUSG00000001120.15 ENSMUST00000001148.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_76949316_-/A chr10:76949315-76949316 A ENSMUSG00000001120.15 ENSMUST00000105411.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_77171419_CACA/- chr10:77171419-77171422 - ENSMUSG00000001435.15 ENSMUST00000081654.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4871;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_77438763_GG/CC chr10:77438763-77438764 CC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_78014179_A/G chr10:78014179 G ENSMUSG00000020277.10 ENSMUST00000020522.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4372;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78014179_A/G chr10:78014179 G ENSMUSG00000020277.10 ENSMUST00000145716.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4096;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78014179_A/G chr10:78014179 G ENSMUSG00000020277.10 ENSMUST00000218383.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4452;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78014179_A/G chr10:78014179 G ENSMUSG00000020277.10 ENSMUST00000220304.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4443;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78014189_T/C chr10:78014189 C ENSMUSG00000020277.10 ENSMUST00000020522.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4382;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78014189_T/C chr10:78014189 C ENSMUSG00000020277.10 ENSMUST00000145716.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4106;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78014189_T/C chr10:78014189 C ENSMUSG00000020277.10 ENSMUST00000218383.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4462;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78014189_T/C chr10:78014189 C ENSMUSG00000020277.10 ENSMUST00000220304.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4453;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000001240.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000105387.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1644;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000105388.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000105389.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000105390.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000138035.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000139282.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000146899.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000150828.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000001211.15 ENSMUST00000166360.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78297039_-/G chr10:78297038-78297039 G ENSMUSG00000112442.1 ENSMUST00000219008.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1276;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78320272_C/T chr10:78320272 T ENSMUSG00000001211.15 ENSMUST00000001240.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78320272_C/T chr10:78320272 T ENSMUSG00000001211.15 ENSMUST00000105388.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78320272_C/T chr10:78320272 T ENSMUSG00000001211.15 ENSMUST00000105390.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78320272_C/T chr10:78320272 T ENSMUSG00000001211.15 ENSMUST00000138035.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78320272_C/T chr10:78320272 T ENSMUSG00000001211.15 ENSMUST00000139282.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78320272_C/T chr10:78320272 T ENSMUSG00000001211.15 ENSMUST00000146899.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_78320272_C/T chr10:78320272 T ENSMUSG00000001211.15 ENSMUST00000166360.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79238081_G/A chr10:79238081 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035773.6 ENSMUST00000045529.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2738;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000045628.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000171416.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000095023.1 ENSMUST00000178620.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4932;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000097854.1 ENSMUST00000181321.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3093;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000217976.1 Transcript frameshift_variant,NMD_transcript_variant 120 85 29 L/X Cta/ta - IMPACT=HIGH;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000218750.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000218970.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000219206.1 Transcript non_coding_transcript_exon_variant 2695 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000219358.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1546;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035773.6 ENSMUST00000219745.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4441;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035781.14 ENSMUST00000219867.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_79914233_G/- chr10:79914233 - ENSMUSG00000035773.6 ENSMUST00000219883.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2738;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80110995_-/CTTT chr10:80110994-80110995 CTTT ENSMUSG00000003068.16 ENSMUST00000003152.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4808;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80110995_-/CTTT chr10:80110994-80110995 CTTT ENSMUSG00000003068.16 ENSMUST00000144883.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4808;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 A ENSMUSG00000020156.16 ENSMUST00000020365.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 GA ENSMUSG00000020156.16 ENSMUST00000020365.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 A ENSMUSG00000020156.16 ENSMUST00000125784.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 GA ENSMUSG00000020156.16 ENSMUST00000125784.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 A ENSMUSG00000020156.16 ENSMUST00000130260.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 GA ENSMUSG00000020156.16 ENSMUST00000130260.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 A ENSMUSG00000020156.16 ENSMUST00000139431.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 GA ENSMUSG00000020156.16 ENSMUST00000139431.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 A ENSMUSG00000020156.16 ENSMUST00000141962.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80228673_G/A/GA chr10:80228673 GA ENSMUSG00000020156.16 ENSMUST00000141962.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80376425_TT/- chr10:80376425-80376426 - ENSMUSG00000048696.11 ENSMUST00000105350.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3929;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80376425_TT/- chr10:80376425-80376426 - ENSMUSG00000048696.11 ENSMUST00000123141.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4028;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80376425_TT/- chr10:80376425-80376426 - ENSMUSG00000087432.1 ENSMUST00000138988.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3993;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80376425_TT/- chr10:80376425-80376426 - ENSMUSG00000085712.1 ENSMUST00000142053.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3209;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80376425_TT/- chr10:80376425-80376426 - ENSMUSG00000112648.1 ENSMUST00000218129.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=741;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80461947_GAGA/- chr10:80461947-80461950 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_80552119_GTGTGT/- chr10:80552119-80552124 - ENSMUSG00000047417.17 ENSMUST00000057910.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80552119_GTGTGT/- chr10:80552119-80552124 - ENSMUSG00000047417.17 ENSMUST00000182260.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4198;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80552119_GTGTGT/- chr10:80552119-80552124 - ENSMUSG00000047417.17 ENSMUST00000183073.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2657;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_80552119_GTGTGT/- chr10:80552119-80552124 - ENSMUSG00000047417.17 ENSMUST00000183139.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2659;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_81017027_GTGT/- chr10:81017027-81017030 - ENSMUSG00000043670.4 ENSMUST00000055125.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2559;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_81017027_GTGT/- chr10:81017027-81017030 - ENSMUSG00000048240.14 ENSMUST00000092285.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2102;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_81017027_GTGT/- chr10:81017027-81017030 - ENSMUSG00000048240.14 ENSMUST00000117805.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2082;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_81017027_GTGT/- chr10:81017027-81017030 - ENSMUSG00000048240.14 ENSMUST00000126317.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2114;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_82251236_CT/AC chr10:82251236-82251237 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_82251268_G/A chr10:82251268 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_82805918_T/A chr10:82805918 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_82895277_ACAC/- chr10:82895277-82895280 - ENSMUSG00000020250.10 ENSMUST00000020484.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_82895277_ACAC/- chr10:82895277-82895280 - ENSMUSG00000020250.10 ENSMUST00000218724.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_82895277_ACAC/- chr10:82895277-82895280 - ENSMUSG00000020250.10 ENSMUST00000219368.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_82895277_ACAC/- chr10:82895277-82895280 - ENSMUSG00000020250.10 ENSMUST00000219442.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_82895277_ACAC/- chr10:82895277-82895280 - ENSMUSG00000020250.10 ENSMUST00000219962.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83363560_A/T chr10:83363560 T ENSMUSG00000020255.8 ENSMUST00000020488.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83363566_C/G chr10:83363566 G ENSMUSG00000020255.8 ENSMUST00000020488.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83517794_-/TCTT chr10:83517793-83517794 TCTT ENSMUSG00000020256.14 ENSMUST00000020497.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83517794_-/TCTT chr10:83517793-83517794 TCTT ENSMUSG00000020256.14 ENSMUST00000125193.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4073;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83517794_-/TCTT chr10:83517793-83517794 TCTT ENSMUSG00000020256.14 ENSMUST00000138858.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83517794_-/TCTT chr10:83517793-83517794 TCTT ENSMUSG00000020256.14 ENSMUST00000146640.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83815196_TT/- chr10:83815196-83815197 - ENSMUSG00000112077.1 ENSMUST00000218819.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3631;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_83832524_A/C chr10:83832524 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_84274115_G/A chr10:84274115 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_84350604_G/T chr10:84350604 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_84565324_A/C chr10:84565324 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_84565327_A/C chr10:84565327 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_84661258_T/- chr10:84661258 - ENSMUSG00000034453.8 ENSMUST00000077175.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_84661258_T/- chr10:84661258 - ENSMUSG00000034453.8 ENSMUST00000215853.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_84822819_TCCCCGT/- chr10:84822819-84822825 - ENSMUSG00000020037.15 ENSMUST00000060397.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86094092_TT/- chr10:86094092-86094093 - ENSMUSG00000059602.14 ENSMUST00000120638.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86094092_TT/- chr10:86094092-86094093 - ENSMUSG00000059602.14 ENSMUST00000145864.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86094092_TT/- chr10:86094092-86094093 - ENSMUSG00000112493.1 ENSMUST00000218077.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1766;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86156022_-/CTT chr10:86156021-86156022 CTT ENSMUSG00000059602.14 ENSMUST00000120638.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86156022_-/CTT chr10:86156021-86156022 CTT ENSMUSG00000059602.14 ENSMUST00000145864.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86284270_C/A chr10:86284270 A ENSMUSG00000059602.14 ENSMUST00000120638.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86284270_C/A chr10:86284270 A ENSMUSG00000059602.14 ENSMUST00000145864.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86601447_AGG/- chr10:86601447-86601449 - ENSMUSG00000112010.1 ENSMUST00000218018.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=5;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86601447_AGG/- chr10:86601447-86601449 - ENSMUSG00000112834.1 ENSMUST00000219346.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=332;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86601447_AGG/- chr10:86601447-86601449 - ENSMUSG00000112638.1 ENSMUST00000219676.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=119;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86601447_AGG/- chr10:86601447-86601449 - ENSMUSG00000112078.1 ENSMUST00000219709.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2843;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86601447_AGG/- chr10:86601447-86601449 - ENSMUSG00000111998.1 ENSMUST00000219908.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1559;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86731626_AAAC/- chr10:86731626-86731629 - ENSMUSG00000056366.5 ENSMUST00000070435.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=358;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86731626_AAAC/- chr10:86731626-86731629 - ENSMUSG00000044937.15 ENSMUST00000075632.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_86731626_AAAC/- chr10:86731626-86731629 - ENSMUSG00000044937.15 ENSMUST00000219108.1 Transcript 3_prime_UTR_variant 2181-2184 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88257234_T/G chr10:88257234 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_88347936_-/ATAG chr10:88347935-88347936 ATAG ENSMUSG00000020057.2 ENSMUST00000020249.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88347936_-/ATAG chr10:88347935-88347936 ATAG ENSMUSG00000020057.2 ENSMUST00000138159.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88347936_-/ATAG chr10:88347935-88347936 ATAG ENSMUSG00000020057.2 ENSMUST00000156097.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 - ENSMUSG00000060002.14 ENSMUST00000020253.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 TTT ENSMUSG00000060002.14 ENSMUST00000020253.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 - ENSMUSG00000060002.14 ENSMUST00000073783.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 TTT ENSMUSG00000060002.14 ENSMUST00000073783.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 - ENSMUSG00000060002.14 ENSMUST00000117440.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 TTT ENSMUSG00000060002.14 ENSMUST00000117440.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 - ENSMUSG00000060002.14 ENSMUST00000117579.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 TTT ENSMUSG00000060002.14 ENSMUST00000117579.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 - ENSMUSG00000060002.14 ENSMUST00000126074.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 TTT ENSMUSG00000060002.14 ENSMUST00000126074.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 - ENSMUSG00000060002.14 ENSMUST00000139109.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 TTT ENSMUSG00000060002.14 ENSMUST00000139109.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 - ENSMUSG00000060002.14 ENSMUST00000143108.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88497567_TTTT/-/TTT chr10:88497567-88497570 TTT ENSMUSG00000060002.14 ENSMUST00000143108.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 - ENSMUSG00000060904.14 ENSMUST00000080379.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1792;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 A ENSMUSG00000060904.14 ENSMUST00000080379.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1792;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 AAA ENSMUSG00000060904.14 ENSMUST00000080379.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1792;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 - ENSMUSG00000069540.4 ENSMUST00000092231.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=234;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 A ENSMUSG00000069540.4 ENSMUST00000092231.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=234;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 AAA ENSMUSG00000069540.4 ENSMUST00000092231.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=234;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 - ENSMUSG00000060904.14 ENSMUST00000116234.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=982;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 A ENSMUSG00000060904.14 ENSMUST00000116234.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=982;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 AAA ENSMUSG00000060904.14 ENSMUST00000116234.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=982;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 - ENSMUSG00000069540.4 ENSMUST00000168843.1 Transcript non_coding_transcript_exon_variant 1016-1017 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 A ENSMUSG00000069540.4 ENSMUST00000168843.1 Transcript non_coding_transcript_exon_variant 1016-1017 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 AAA ENSMUSG00000069540.4 ENSMUST00000168843.1 Transcript non_coding_transcript_exon_variant 1016-1017 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 - ENSMUSG00000060904.14 ENSMUST00000170137.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=772;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 A ENSMUSG00000060904.14 ENSMUST00000170137.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=772;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_88730085_AA/-/A/AAA chr10:88730085-88730086 AAA ENSMUSG00000060904.14 ENSMUST00000170137.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=772;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_89283400_ACAC/- chr10:89283400-89283403 - ENSMUSG00000035189.16 ENSMUST00000182419.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_89283400_ACAC/- chr10:89283400-89283403 - ENSMUSG00000035189.16 ENSMUST00000182624.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_89898190_TT/- chr10:89898190-89898191 - ENSMUSG00000058589.14 ENSMUST00000099368.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_89898190_TT/- chr10:89898190-89898191 - ENSMUSG00000058589.14 ENSMUST00000182907.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_89898190_TT/- chr10:89898190-89898191 - ENSMUSG00000058589.14 ENSMUST00000182936.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_89898190_TT/- chr10:89898190-89898191 - ENSMUSG00000058589.14 ENSMUST00000183156.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90144185_TT/- chr10:90144185-90144186 - ENSMUSG00000058589.14 ENSMUST00000099368.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90144185_TT/- chr10:90144185-90144186 - ENSMUSG00000058589.14 ENSMUST00000182907.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90144185_TT/- chr10:90144185-90144186 - ENSMUSG00000058589.14 ENSMUST00000182936.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90144185_TT/- chr10:90144185-90144186 - ENSMUSG00000058589.14 ENSMUST00000183156.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000099364.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182053.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182113.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182284.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182427.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182430.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182550.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182595.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182786.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182907.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000182960.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000183136.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90790762_T/G chr10:90790762 G ENSMUSG00000058589.14 ENSMUST00000183156.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000099364.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000099364.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000179337.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000179337.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000179694.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000179694.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182053.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182053.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182113.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182113.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182192.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182192.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182284.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182284.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182427.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182427.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182430.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182430.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182550.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182550.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182595.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182595.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182632.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182632.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182786.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182786.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182907.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182907.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182960.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182960.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000182966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000182966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000183051.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000183051.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000183136.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000183136.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000183145.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000183145.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 - ENSMUSG00000058589.14 ENSMUST00000183156.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90863279_ACAC/-/AC chr10:90863279-90863282 AC ENSMUSG00000058589.14 ENSMUST00000183156.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000099364.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000179337.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000179694.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182053.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182113.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182192.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182284.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182356.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182427.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182430.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182550.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182595.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182632.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182786.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182907.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182960.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000182966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000183051.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000183136.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000183145.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_90868116_ACCCCAT/- chr10:90868116-90868122 - ENSMUSG00000058589.14 ENSMUST00000183156.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_91089704_GTGT/- chr10:91089704-91089707 - ENSMUSG00000019975.12 ENSMUST00000020149.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_91089704_GTGT/- chr10:91089704-91089707 - ENSMUSG00000019975.12 ENSMUST00000020150.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_91089704_GTGT/- chr10:91089704-91089707 - ENSMUSG00000019975.12 ENSMUST00000128371.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_91089704_GTGT/- chr10:91089704-91089707 - ENSMUSG00000019975.12 ENSMUST00000135152.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_91866146_C/G chr10:91866146 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_91866156_C/G chr10:91866156 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_92446866_-/TT chr10:92446865-92446866 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_92811924_TATTTATT/-/TATT chr10:92811924-92811931 - ENSMUSG00000020014.17 ENSMUST00000163209.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811924_TATTTATT/-/TATT chr10:92811924-92811931 TATT ENSMUSG00000020014.17 ENSMUST00000163209.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811924_TATTTATT/-/TATT chr10:92811924-92811931 - ENSMUSG00000020014.17 ENSMUST00000168110.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811924_TATTTATT/-/TATT chr10:92811924-92811931 TATT ENSMUSG00000020014.17 ENSMUST00000168110.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811924_TATTTATT/-/TATT chr10:92811924-92811931 - ENSMUSG00000020014.17 ENSMUST00000212902.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811924_TATTTATT/-/TATT chr10:92811924-92811931 TATT ENSMUSG00000020014.17 ENSMUST00000212902.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811931_T/G chr10:92811931 G ENSMUSG00000020014.17 ENSMUST00000163209.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811931_T/G chr10:92811931 G ENSMUSG00000020014.17 ENSMUST00000168110.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_92811931_T/G chr10:92811931 G ENSMUSG00000020014.17 ENSMUST00000212902.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93392186_G/T chr10:93392186 T ENSMUSG00000111316.1 ENSMUST00000214319.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4904;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93572953_GA/- chr10:93572953-93572954 - ENSMUSG00000036168.15 ENSMUST00000092215.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93572953_GA/- chr10:93572953-93572954 - ENSMUSG00000036168.15 ENSMUST00000128786.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93572953_GA/- chr10:93572953-93572954 - ENSMUSG00000036168.15 ENSMUST00000132214.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93746398_GG/- chr10:93746398-93746399 - ENSMUSG00000020019.4 ENSMUST00000020204.4 Transcript 3_prime_UTR_variant 2837-2838 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000047910.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2762;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000180375.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2962;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000180688.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2762;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000180739.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2282;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000097689.1 ENSMUST00000180815.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4582;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000180840.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1374;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000181091.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2801;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000181104.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2815;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000181217.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2792;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000181236.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2848;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000181434.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000181740.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1447;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93892576_G/T chr10:93892576 T ENSMUSG00000036112.15 ENSMUST00000215642.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2768;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_93924712_TT/- chr10:93924712-93924713 - ENSMUSG00000114757.1 ENSMUST00000225546.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_94507972_ACAC/-/AC chr10:94507972-94507975 - ENSMUSG00000020023.18 ENSMUST00000132743.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_94507972_ACAC/-/AC chr10:94507972-94507975 AC ENSMUSG00000020023.18 ENSMUST00000132743.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_94548974_A/C chr10:94548974 C ENSMUSG00000020023.18 ENSMUST00000065060.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_94548974_A/C chr10:94548974 C ENSMUSG00000020023.18 ENSMUST00000117460.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1898;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_94548974_A/C chr10:94548974 C ENSMUSG00000020023.18 ENSMUST00000132743.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_94548974_A/C chr10:94548974 C ENSMUSG00000020023.18 ENSMUST00000148823.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_94548974_A/C chr10:94548974 C ENSMUSG00000020023.18 ENSMUST00000148910.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1878;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_95134917_T/- chr10:95134917 - ENSMUSG00000112501.1 ENSMUST00000217798.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_95134917_T/- chr10:95134917 - ENSMUSG00000112481.1 ENSMUST00000220248.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_95198308_CACACA/- chr10:95198308-95198313 - ENSMUSG00000045867.10 ENSMUST00000053594.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_95198308_CACACA/- chr10:95198308-95198313 - ENSMUSG00000045867.10 ENSMUST00000217809.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_95198308_CACACA/- chr10:95198308-95198313 - ENSMUSG00000045867.10 ENSMUST00000220279.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_95469559_-/CACA chr10:95469558-95469559 CACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_95471525_GTGTGTGTGT/- chr10:95471525-95471534 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_96642065_C/T chr10:96642065 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_96708209_G/A chr10:96708209 A ENSMUSG00000112362.1 ENSMUST00000219424.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3598;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_96963444_C/- chr10:96963444 - ENSMUSG00000112488.1 ENSMUST00000219918.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4573;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_96963446_GTTTC/- chr10:96963446-96963450 - ENSMUSG00000112488.1 ENSMUST00000219918.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4575;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_97100886_GAGAGA/- chr10:97100886-97100891 - ENSMUSG00000112631.1 ENSMUST00000219874.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4602;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_97736544_GAGA/- chr10:97736544-97736547 - ENSMUSG00000112497.1 ENSMUST00000217919.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_97736544_GAGA/- chr10:97736544-97736547 - ENSMUSG00000074776.4 ENSMUST00000220233.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_97929139_G/T chr10:97929139 T ENSMUSG00000074776.4 ENSMUST00000220233.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_98135796_A/G chr10:98135796 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_98280023_ACAC/-/AC/ACACAC chr10:98280023-98280026 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_98280023_ACAC/-/AC/ACACAC chr10:98280023-98280026 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_98280023_ACAC/-/AC/ACACAC chr10:98280023-98280026 ACACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_98353582_AGGAAGGAAGGAAGGA/- chr10:98353582-98353597 - ENSMUSG00000112896.1 ENSMUST00000218457.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1708;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_98392920_TGTG/-/TG chr10:98392920-98392923 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_98392920_TGTG/-/TG chr10:98392920-98392923 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_98444830_-/AA chr10:98444829-98444830 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_98715514_TGTG/- chr10:98715514-98715517 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_99194356_A/C chr10:99194356 C ENSMUSG00000019952.15 ENSMUST00000020113.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99194356_A/C chr10:99194356 C ENSMUSG00000019952.15 ENSMUST00000159043.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1567;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99194356_A/C chr10:99194356 C ENSMUSG00000019952.15 ENSMUST00000159228.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99194356_A/C chr10:99194356 C ENSMUSG00000019952.15 ENSMUST00000159990.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99194356_A/C chr10:99194356 C ENSMUSG00000019952.15 ENSMUST00000162704.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99194356_A/C chr10:99194356 C ENSMUSG00000019952.15 ENSMUST00000162847.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99194356_A/C chr10:99194356 C ENSMUSG00000019952.15 ENSMUST00000219884.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99262011_CC/- chr10:99262011-99262012 - ENSMUSG00000019960.8 ENSMUST00000020118.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1219;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99262011_CC/- chr10:99262011-99262012 - ENSMUSG00000019960.8 ENSMUST00000219988.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2265;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99262011_CC/- chr10:99262011-99262012 - ENSMUSG00000019960.8 ENSMUST00000220218.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3629;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99262011_CC/- chr10:99262011-99262012 - ENSMUSG00000019960.8 ENSMUST00000220291.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1219;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99281485_TCTA/- chr10:99281485-99281488 - ENSMUSG00000112544.1 ENSMUST00000217893.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2401;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99281485_TCTA/- chr10:99281485-99281488 - ENSMUSG00000112544.1 ENSMUST00000218105.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2412;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99281485_TCTA/- chr10:99281485-99281488 - ENSMUSG00000112544.1 ENSMUST00000219440.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4299;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99757776_-/CCCCCCCC chr10:99757775-99757776 CCCCCCCC ENSMUSG00000046934.5 ENSMUST00000056085.5 Transcript 3_prime_UTR_variant 1883-1884 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99757776_-/CCCCCCCC chr10:99757775-99757776 CCCCCCCC ENSMUSG00000112304.1 ENSMUST00000217945.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1730;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_99757776_-/CCCCCCCC chr10:99757775-99757776 CCCCCCCC ENSMUSG00000113032.1 ENSMUST00000222959.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_100642826_A/C chr10:100642826 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_100991492_GTGT/- chr10:100991492-100991495 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_101616657_-/ATATATAT chr10:101616656-101616657 ATATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_101641367_CACA/- chr10:101641367-101641370 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_101833142_-/C chr10:101833141-101833142 C ENSMUSG00000019888.16 ENSMUST00000127504.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_101833142_-/C chr10:101833141-101833142 C ENSMUSG00000019888.16 ENSMUST00000134930.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_101833142_-/C chr10:101833141-101833142 C ENSMUSG00000019888.16 ENSMUST00000146230.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_101833142_-/C chr10:101833141-101833142 C ENSMUSG00000019888.16 ENSMUST00000156751.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_101833142_-/C chr10:101833141-101833142 C ENSMUSG00000019888.16 ENSMUST00000179929.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_101833142_-/C chr10:101833141-101833142 C ENSMUSG00000019888.16 ENSMUST00000219195.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_104493653_GAGCCCCGGGCTACCTTGCCAGCAGAGTCTTGCCCAACACCCGCAAGGGTCCACACGGGACTCCCCACGGGACCCTAAGACCTCTGGTGAGTGGACCACAGTGCCTGCCCCAATCCAATCGCGCGGAACTTGAGACTGCGGTACATAGGGAAGCAGGCTACCCGGGCCTGATCTGGGGCACAAGTCCCTTCCGCTCGACTCGAGACTT/- chr10:104493653-104493860 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_105344529_G/A chr10:105344529 A ENSMUSG00000036019.8 ENSMUST00000061506.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105344529_G/A chr10:105344529 A ENSMUSG00000036019.8 ENSMUST00000143691.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105344529_G/A chr10:105344529 A ENSMUSG00000112193.1 ENSMUST00000219067.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2215;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105558723_G/A chr10:105558723 A ENSMUSG00000036019.8 ENSMUST00000061506.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105558723_G/A chr10:105558723 A ENSMUSG00000036019.8 ENSMUST00000143691.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105558727_G/A chr10:105558727 A ENSMUSG00000036019.8 ENSMUST00000061506.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105558727_G/A chr10:105558727 A ENSMUSG00000036019.8 ENSMUST00000143691.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105773344_AG/- chr10:105773344-105773345 - ENSMUSG00000036009.16 ENSMUST00000046638.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_105773344_AG/- chr10:105773344-105773345 - ENSMUSG00000036009.16 ENSMUST00000176924.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_106427113_-/CTTCT chr10:106427112-106427113 CTTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_106524219_TCA/ACA/T chr10:106524219-106524221 ACA ENSMUSG00000053825.15 ENSMUST00000029404.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_106524219_TCA/ACA/T chr10:106524219-106524221 T ENSMUSG00000053825.15 ENSMUST00000029404.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_106524219_TCA/ACA/T chr10:106524219-106524221 ACA ENSMUSG00000053825.15 ENSMUST00000169303.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_106524219_TCA/ACA/T chr10:106524219-106524221 T ENSMUSG00000053825.15 ENSMUST00000169303.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_106524219_TCA/ACA/T chr10:106524219-106524221 ACA ENSMUSG00000053825.15 ENSMUST00000217854.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_106524219_TCA/ACA/T chr10:106524219-106524221 T ENSMUSG00000053825.15 ENSMUST00000217854.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107102537_C/T chr10:107102537 T ENSMUSG00000035948.13 ENSMUST00000044668.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107102537_C/T chr10:107102537 T ENSMUSG00000035948.13 ENSMUST00000065567.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3456;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107102537_C/T chr10:107102537 T ENSMUSG00000035948.13 ENSMUST00000165067.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107102549_G/A chr10:107102549 A ENSMUSG00000035948.13 ENSMUST00000044668.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107102549_G/A chr10:107102549 A ENSMUSG00000035948.13 ENSMUST00000065567.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3444;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107102549_G/A chr10:107102549 A ENSMUSG00000035948.13 ENSMUST00000165067.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107299849_TATC/- chr10:107299849-107299852 - ENSMUSG00000019906.15 ENSMUST00000020057.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107299849_TATC/- chr10:107299849-107299852 - ENSMUSG00000019906.15 ENSMUST00000105280.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107299849_TATC/- chr10:107299849-107299852 - ENSMUSG00000019906.15 ENSMUST00000218031.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107357812_GGGAGGGAGGGAGGGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr10:107357812-107357856 - ENSMUSG00000019906.15 ENSMUST00000020057.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107357812_GGGAGGGAGGGAGGGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr10:107357812-107357856 - ENSMUSG00000019906.15 ENSMUST00000105280.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107357812_GGGAGGGAGGGAGGGAGGTAGGGAGGGAGGGAGGGAGGGAGGGAG/- chr10:107357812-107357856 - ENSMUSG00000019906.15 ENSMUST00000218031.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107462694_C/- chr10:107462694 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_107972987_GGG/-/GG chr10:107972987-107972989 - ENSMUSG00000112910.1 ENSMUST00000219670.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_107972987_GGG/-/GG chr10:107972987-107972989 GG ENSMUSG00000112910.1 ENSMUST00000219670.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108413485_GTGT/-/GT chr10:108413485-108413488 - ENSMUSG00000035873.8 ENSMUST00000095313.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108413485_GTGT/-/GT chr10:108413485-108413488 GT ENSMUSG00000035873.8 ENSMUST00000095313.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108413485_GTGT/-/GT chr10:108413485-108413488 - ENSMUSG00000112532.1 ENSMUST00000217857.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3763;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108413485_GTGT/-/GT chr10:108413485-108413488 GT ENSMUSG00000112532.1 ENSMUST00000217857.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3763;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108413485_GTGT/-/GT chr10:108413485-108413488 - ENSMUSG00000035873.8 ENSMUST00000218332.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108413485_GTGT/-/GT chr10:108413485-108413488 GT ENSMUSG00000035873.8 ENSMUST00000218332.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108774651_T/- chr10:108774651 - ENSMUSG00000035864.14 ENSMUST00000064054.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108774651_T/- chr10:108774651 - ENSMUSG00000035864.14 ENSMUST00000105276.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108774651_T/- chr10:108774651 - ENSMUSG00000035864.14 ENSMUST00000156979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108774651_T/- chr10:108774651 - ENSMUSG00000111910.1 ENSMUST00000219164.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3660;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 - ENSMUSG00000035864.14 ENSMUST00000064054.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 TG ENSMUSG00000035864.14 ENSMUST00000064054.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 - ENSMUSG00000035864.14 ENSMUST00000105276.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 TG ENSMUSG00000035864.14 ENSMUST00000105276.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 - ENSMUSG00000035864.14 ENSMUST00000126278.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 TG ENSMUSG00000035864.14 ENSMUST00000126278.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 - ENSMUSG00000035864.14 ENSMUST00000146618.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 TG ENSMUSG00000035864.14 ENSMUST00000146618.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 - ENSMUSG00000035864.14 ENSMUST00000156979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_108928798_TGTG/-/TG chr10:108928798-108928801 TG ENSMUSG00000035864.14 ENSMUST00000156979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_109602996_GAGAGA/- chr10:109602996-109603001 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_109930420_AACACGCACACATG/- chr10:109930420-109930433 - ENSMUSG00000020181.16 ENSMUST00000032719.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_109930420_AACACGCACACATG/- chr10:109930420-109930433 - ENSMUSG00000020181.16 ENSMUST00000160159.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_109930441_ACACACACACAGAGACACACACACATGCACATGCATGCATGCACACACAGAT/- chr10:109930441-109930492 - ENSMUSG00000020181.16 ENSMUST00000032719.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_109930441_ACACACACACAGAGACACACACACATGCACATGCATGCATGCACACACAGAT/- chr10:109930441-109930492 - ENSMUSG00000020181.16 ENSMUST00000160159.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110093811_T/C chr10:110093811 C ENSMUSG00000020181.16 ENSMUST00000160159.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110288070_GTGTGT/-/GTGT chr10:110288070-110288075 - ENSMUSG00000020181.16 ENSMUST00000160159.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110288070_GTGTGT/-/GTGT chr10:110288070-110288075 GTGT ENSMUSG00000020181.16 ENSMUST00000160159.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000073781.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000172574.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2441;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000173294.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3675;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000173471.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000173634.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000173948.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2511;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000174810.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_110751821_T/- chr10:110751821 - ENSMUSG00000020185.16 ENSMUST00000174857.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_112252759_AAAGCA/- chr10:112252759-112252764 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_112768165_TT/- chr10:112768165-112768166 - ENSMUSG00000100314.6 ENSMUST00000187828.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_112768165_TT/- chr10:112768165-112768166 - ENSMUSG00000100314.6 ENSMUST00000189116.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_112907813_-/GACA chr10:112907812-112907813 GACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_113128404_G/A chr10:113128404 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_113390456_AGAG/-/AG chr10:113390456-113390459 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_113390456_AGAG/-/AG chr10:113390456-113390459 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_114849714_AAA/-/AA chr10:114849714-114849716 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_114849714_AAA/-/AA chr10:114849714-114849716 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_114852522_-/TGTG chr10:114852521-114852522 TGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000092170.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=30;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000217848.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=335;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000217884.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000217887.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=50;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000218009.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=40;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000218731.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=66;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000219597.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=100;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000219890.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=73;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362297_T/C chr10:115362297 C ENSMUSG00000069520.6 ENSMUST00000220336.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000092170.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=35;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000217848.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=340;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000217884.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000217887.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=55;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000218009.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=45;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000218731.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=71;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000219597.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=105;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000219890.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=78;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115362302_GCCCTCGGA/- chr10:115362302-115362310 - ENSMUSG00000069520.6 ENSMUST00000220336.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115392001_TGTG/-/TG chr10:115392001-115392004 - ENSMUSG00000034163.10 ENSMUST00000036044.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115392001_TGTG/-/TG chr10:115392001-115392004 TG ENSMUSG00000034163.10 ENSMUST00000036044.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115392001_TGTG/-/TG chr10:115392001-115392004 - ENSMUSG00000112822.1 ENSMUST00000218674.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2746;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115392001_TGTG/-/TG chr10:115392001-115392004 TG ENSMUSG00000112822.1 ENSMUST00000218674.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2746;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 - ENSMUSG00000020140.15 ENSMUST00000020350.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 TG ENSMUSG00000020140.15 ENSMUST00000020350.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 - ENSMUSG00000020140.15 ENSMUST00000105272.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 TG ENSMUSG00000020140.15 ENSMUST00000105272.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 - ENSMUSG00000020140.15 ENSMUST00000149008.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2704;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 TG ENSMUSG00000020140.15 ENSMUST00000149008.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2704;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 - ENSMUSG00000020140.15 ENSMUST00000172806.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 TG ENSMUSG00000020140.15 ENSMUST00000172806.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 - ENSMUSG00000020140.15 ENSMUST00000173740.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115470668_TGTG/-/TG chr10:115470668-115470671 TG ENSMUSG00000020140.15 ENSMUST00000173740.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115816752_-/TT chr10:115816751-115816752 TT ENSMUSG00000034127.15 ENSMUST00000035563.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=532;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115816752_-/TT chr10:115816751-115816752 TT ENSMUSG00000034127.15 ENSMUST00000080630.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=519;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115816752_-/TT chr10:115816751-115816752 TT ENSMUSG00000034127.15 ENSMUST00000179196.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=531;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115816752_-/TT chr10:115816751-115816752 TT ENSMUSG00000034127.15 ENSMUST00000217900.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=80;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_115816752_-/TT chr10:115816751-115816752 TT ENSMUSG00000112513.1 ENSMUST00000220081.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_116138571_CTCTCT/-/CTCTCTCT chr10:116138571-116138576 - ENSMUSG00000020151.16 ENSMUST00000063470.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_116138571_CTCTCT/-/CTCTCTCT chr10:116138571-116138576 CTCTCTCT ENSMUSG00000020151.16 ENSMUST00000063470.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_116849625_CACA/-/CA chr10:116849625-116849628 - ENSMUSG00000034057.8 ENSMUST00000048229.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_116849625_CACA/-/CA chr10:116849625-116849628 CA ENSMUSG00000034057.8 ENSMUST00000048229.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_117463475_TT/- chr10:117463475-117463476 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_117541542_AGAG/-/AG chr10:117541542-117541545 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_117541542_AGAG/-/AG chr10:117541542-117541545 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_117632878_TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTATGTGTGTGTGTATGTATGTGTGTGTGTATGTGTGTGTATGTGTGTGTATGTGTGTGTACGTGTATGCGTGTATATGTGTGTGTGTGTATGTGTGTGTGTATGTGTATATGTGTGTGTATGTGTG/- chr10:117632878-117633063 - ENSMUSG00000020183.11 ENSMUST00000020399.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_117632878_TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTATGTGTGTGTGTATGTATGTGTGTGTGTATGTGTGTGTATGTGTGTGTATGTGTGTGTACGTGTATGCGTGTATATGTGTGTGTGTGTATGTGTGTGTGTATGTGTATATGTGTGTGTATGTGTG/- chr10:117632878-117633063 - ENSMUSG00000020183.11 ENSMUST00000123374.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_117632878_TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTATGTGTGTGTGTATGTATGTGTGTGTGTATGTGTGTGTATGTGTGTGTATGTGTGTGTACGTGTATGCGTGTATATGTGTGTGTGTGTATGTGTGTGTGTATGTGTATATGTGTGTGTATGTGTG/- chr10:117632878-117633063 - ENSMUSG00000020183.11 ENSMUST00000138020.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_118015109_T/G chr10:118015109 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_118627713_A/T chr10:118627713 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_119590956_TGTG/- chr10:119590956-119590959 - ENSMUSG00000034813.17 ENSMUST00000041962.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119590956_TGTG/- chr10:119590956-119590959 - ENSMUSG00000034813.17 ENSMUST00000077871.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119590956_TGTG/- chr10:119590956-119590959 - ENSMUSG00000034813.17 ENSMUST00000147356.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000041962.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000077871.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000105262.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000138410.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000139352.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000144825.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000144959.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000147356.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000147454.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000147598.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_119893532_C/A chr10:119893532 A ENSMUSG00000034813.17 ENSMUST00000148954.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120129837_GG/- chr10:120129837-120129838 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_120719094_T/A chr10:120719094 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_120781870_G/T chr10:120781870 T ENSMUSG00000044544.4 ENSMUST00000056994.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2984;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120781870_G/T chr10:120781870 T ENSMUSG00000051236.13 ENSMUST00000092143.11 Transcript 3_prime_UTR_variant 3069 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120781870_G/T chr10:120781870 T ENSMUSG00000051236.13 ENSMUST00000130950.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2024;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120781870_G/T chr10:120781870 T ENSMUSG00000051236.13 ENSMUST00000139961.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1882;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 - ENSMUSG00000044544.4 ENSMUST00000056994.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4429;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 A ENSMUSG00000044544.4 ENSMUST00000056994.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4429;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 AAA ENSMUSG00000044544.4 ENSMUST00000056994.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4429;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 - ENSMUSG00000051236.13 ENSMUST00000092143.11 Transcript 3_prime_UTR_variant 1623-1624 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 A ENSMUSG00000051236.13 ENSMUST00000092143.11 Transcript 3_prime_UTR_variant 1623-1624 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 AAA ENSMUSG00000051236.13 ENSMUST00000092143.11 Transcript 3_prime_UTR_variant 1623-1624 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 - ENSMUSG00000051236.13 ENSMUST00000130950.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=578;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 A ENSMUSG00000051236.13 ENSMUST00000130950.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=578;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 AAA ENSMUSG00000051236.13 ENSMUST00000130950.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=578;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 - ENSMUSG00000051236.13 ENSMUST00000139961.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=436;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 A ENSMUSG00000051236.13 ENSMUST00000139961.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=436;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120783315_AA/-/A/AAA chr10:120783315-120783316 AAA ENSMUSG00000051236.13 ENSMUST00000139961.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=436;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120964305_AGGGGGAGAGAGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGA/- chr10:120964305-120964375 - ENSMUSG00000048661.14 ENSMUST00000119093.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_120964305_AGGGGGAGAGAGAGAGAGAGAGAGGGGGAGAGAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGAGAGA/- chr10:120964305-120964375 - ENSMUSG00000048661.14 ENSMUST00000119944.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121045050_CACA/- chr10:121045050-121045053 - ENSMUSG00000020218.11 ENSMUST00000020439.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121045050_CACA/- chr10:121045050-121045053 - ENSMUSG00000020218.11 ENSMUST00000175867.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121062577_TT/- chr10:121062577-121062578 - ENSMUSG00000020218.11 ENSMUST00000020439.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121062577_TT/- chr10:121062577-121062578 - ENSMUSG00000020218.11 ENSMUST00000175867.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121098855_-/AGAT chr10:121098854-121098855 AGAT ENSMUSG00000020218.11 ENSMUST00000020439.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121098855_-/AGAT chr10:121098854-121098855 AGAT ENSMUSG00000020218.11 ENSMUST00000145691.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121098855_-/AGAT chr10:121098854-121098855 AGAT ENSMUSG00000020218.11 ENSMUST00000175867.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121397581_G/C chr10:121397581 C ENSMUSG00000034707.7 ENSMUST00000040344.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=336;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121397581_G/C chr10:121397581 C ENSMUSG00000112209.1 ENSMUST00000218038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3132;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121397581_G/C chr10:121397581 C ENSMUSG00000034707.7 ENSMUST00000219216.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=332;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121397583_T/C chr10:121397583 C ENSMUSG00000034707.7 ENSMUST00000040344.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=338;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121397583_T/C chr10:121397583 C ENSMUSG00000112209.1 ENSMUST00000218038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3130;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121397583_T/C chr10:121397583 C ENSMUSG00000034707.7 ENSMUST00000219216.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=334;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121593194_AA/- chr10:121593194-121593195 - ENSMUSG00000034667.8 ENSMUST00000039810.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121593194_AA/- chr10:121593194-121593195 - ENSMUSG00000034667.8 ENSMUST00000218004.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121593194_AA/- chr10:121593194-121593195 - ENSMUSG00000034667.8 ENSMUST00000219334.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121840556_T/C chr10:121840556 C ENSMUSG00000020121.15 ENSMUST00000020322.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_121840556_T/C chr10:121840556 C ENSMUSG00000020121.15 ENSMUST00000081688.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122142115_A/G chr10:122142115 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_122409793_AGAGAG/-/AGAG chr10:122409793-122409798 - ENSMUSG00000112873.1 ENSMUST00000218285.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122409793_AGAGAG/-/AGAG chr10:122409793-122409798 AGAG ENSMUSG00000112873.1 ENSMUST00000218285.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122409793_AGAGAG/-/AGAG chr10:122409793-122409798 - ENSMUSG00000112774.1 ENSMUST00000218971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122409793_AGAGAG/-/AGAG chr10:122409793-122409798 AGAG ENSMUSG00000112774.1 ENSMUST00000218971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122899672_-/GT chr10:122899671-122899672 GT ENSMUSG00000034613.12 ENSMUST00000067918.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122899672_-/GT chr10:122899671-122899672 GT ENSMUSG00000034613.12 ENSMUST00000161065.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122899672_-/GT chr10:122899671-122899672 GT ENSMUSG00000034613.12 ENSMUST00000161487.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122899672_-/GT chr10:122899671-122899672 GT ENSMUSG00000034613.12 ENSMUST00000162969.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122900824_TTT/- chr10:122900824-122900826 - ENSMUSG00000034613.12 ENSMUST00000067918.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122900824_TTT/- chr10:122900824-122900826 - ENSMUSG00000034613.12 ENSMUST00000161065.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122900824_TTT/- chr10:122900824-122900826 - ENSMUSG00000034613.12 ENSMUST00000161487.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_122900824_TTT/- chr10:122900824-122900826 - ENSMUSG00000034613.12 ENSMUST00000162969.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059600_-/CCCCCCCCCCCC chr10:123059599-123059600 CCCCCCCCCCCC ENSMUSG00000034602.15 ENSMUST00000037557.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059600_-/CCCCCCCCCCCC chr10:123059599-123059600 CCCCCCCCCCCC ENSMUSG00000034602.15 ENSMUST00000073792.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059600_-/CCCCCCCCCCCC chr10:123059599-123059600 CCCCCCCCCCCC ENSMUSG00000034602.15 ENSMUST00000170935.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059600_-/CCCCCCCCCCCC chr10:123059599-123059600 CCCCCCCCCCCC ENSMUSG00000034602.15 ENSMUST00000219203.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059607_G/C chr10:123059607 C ENSMUSG00000034602.15 ENSMUST00000037557.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059607_G/C chr10:123059607 C ENSMUSG00000034602.15 ENSMUST00000073792.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059607_G/C chr10:123059607 C ENSMUSG00000034602.15 ENSMUST00000170935.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123059607_G/C chr10:123059607 C ENSMUSG00000034602.15 ENSMUST00000219203.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123108591_CACA/- chr10:123108591-123108594 - ENSMUSG00000020124.10 ENSMUST00000020334.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3142;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123108591_CACA/- chr10:123108591-123108594 - ENSMUSG00000020124.10 ENSMUST00000219937.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4634;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123108591_CACA/- chr10:123108591-123108594 - ENSMUSG00000020124.10 ENSMUST00000220377.1 Transcript 3_prime_UTR_variant 7937-7940 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123325358_CC/- chr10:123325358-123325359 - ENSMUSG00000044071.8 ENSMUST00000050756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123325358_CC/- chr10:123325358-123325359 - ENSMUSG00000044071.8 ENSMUST00000218926.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123325358_CC/- chr10:123325358-123325359 - ENSMUSG00000044071.8 ENSMUST00000219723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123472412_C/T chr10:123472412 T ENSMUSG00000044071.8 ENSMUST00000050756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123472412_C/T chr10:123472412 T ENSMUSG00000044071.8 ENSMUST00000218926.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123472412_C/T chr10:123472412 T ENSMUSG00000044071.8 ENSMUST00000219723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123572989_C/A chr10:123572989 A ENSMUSG00000044071.8 ENSMUST00000050756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123572989_C/A chr10:123572989 A ENSMUSG00000044071.8 ENSMUST00000218926.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123572989_C/A chr10:123572989 A ENSMUSG00000044071.8 ENSMUST00000219723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123657472_ACTACT/-/ACT chr10:123657472-123657477 - ENSMUSG00000044071.8 ENSMUST00000050756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123657472_ACTACT/-/ACT chr10:123657472-123657477 ACT ENSMUSG00000044071.8 ENSMUST00000050756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123657472_ACTACT/-/ACT chr10:123657472-123657477 - ENSMUSG00000044071.8 ENSMUST00000218926.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123657472_ACTACT/-/ACT chr10:123657472-123657477 ACT ENSMUSG00000044071.8 ENSMUST00000218926.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123657472_ACTACT/-/ACT chr10:123657472-123657477 - ENSMUSG00000044071.8 ENSMUST00000219723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123657472_ACTACT/-/ACT chr10:123657472-123657477 ACT ENSMUSG00000044071.8 ENSMUST00000219723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123694386_-/TATC chr10:123694385-123694386 TATC ENSMUSG00000044071.8 ENSMUST00000050756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123694386_-/TATC chr10:123694385-123694386 TATC ENSMUSG00000044071.8 ENSMUST00000218926.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_123694386_-/TATC chr10:123694385-123694386 TATC ENSMUSG00000044071.8 ENSMUST00000219723.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_124345970_ACAC/- chr10:124345970-124345973 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_124394706_TT/-/TTT chr10:124394706-124394707 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_124394706_TT/-/TTT chr10:124394706-124394707 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_126092907_C/T chr10:126092907 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_126284632_T/C chr10:126284632 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_126481033_-/AAGAAAGG chr10:126481032-126481033 AAGAAAGG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_126850237_-/ATAG chr10:126850236-126850237 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_127970966_AG/- chr10:127970966-127970967 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_128289084_GTGT/- chr10:128289084-128289087 - ENSMUSG00000040033.16 ENSMUST00000085708.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128289084_GTGT/- chr10:128289084-128289087 - ENSMUSG00000040033.16 ENSMUST00000105238.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128289084_GTGT/- chr10:128289084-128289087 - ENSMUSG00000040033.16 ENSMUST00000218862.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128289084_GTGT/- chr10:128289084-128289087 - ENSMUSG00000040033.16 ENSMUST00000220277.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000025374.13 ENSMUST00000026439.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000039878.13 ENSMUST00000042666.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2132;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000025374.13 ENSMUST00000164199.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000025374.13 ENSMUST00000164664.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000014498.9 ENSMUST00000166577.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000025374.13 ENSMUST00000166608.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000025374.13 ENSMUST00000167456.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000039878.13 ENSMUST00000167859.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2895;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000025374.13 ENSMUST00000172238.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4801;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000025374.13 ENSMUST00000172348.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000094650.1 ENSMUST00000179358.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=528;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000039878.13 ENSMUST00000218858.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2895;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000039878.13 ENSMUST00000219131.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2844;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128403361_AA/- chr10:128403361-128403362 - ENSMUSG00000039878.13 ENSMUST00000219222.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2151;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128726307_T/A chr10:128726307 A ENSMUSG00000025357.8 ENSMUST00000026414.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128726307_T/A chr10:128726307 A ENSMUSG00000025357.8 ENSMUST00000217957.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2547;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_128726307_T/A chr10:128726307 A ENSMUSG00000025357.8 ENSMUST00000219834.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_129594039_A/T chr10:129594039 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr10_129680233_G/A chr10:129680233 A ENSMUSG00000093866.3 ENSMUST00000074713.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1566;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_129680233_G/A chr10:129680233 A ENSMUSG00000093866.3 ENSMUST00000203785.2 Transcript 3_prime_UTR_variant 2985 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_129680233_G/A chr10:129680233 A ENSMUSG00000093866.3 ENSMUST00000217576.1 Transcript 3_prime_UTR_variant 2747 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_129763868_CTCT/- chr10:129763868-129763871 - ENSMUSG00000049894.3 ENSMUST00000060636.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3627;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_129763868_CTCT/- chr10:129763868-129763871 - ENSMUSG00000049894.3 ENSMUST00000203236.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1611;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_130038857_TT/- chr10:130038857-130038858 - ENSMUSG00000044897.3 ENSMUST00000054364.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4297;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_130038857_TT/- chr10:130038857-130038858 - ENSMUSG00000044897.3 ENSMUST00000205181.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3786;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr10_130038857_TT/- chr10:130038857-130038858 - ENSMUSG00000044897.3 ENSMUST00000214177.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3786;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3122528_C/G chr11:3122528 G ENSMUSG00000082286.10 ENSMUST00000119128.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3478;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3122528_C/G chr11:3122528 G ENSMUSG00000082286.10 ENSMUST00000132408.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3122528_C/G chr11:3122528 G ENSMUSG00000082286.10 ENSMUST00000145164.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3376;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000066391.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000081318.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000101655.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000132893.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000138126.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000140846.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000141422.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000142315.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000143442.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000144359.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000144778.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000153425.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000155763.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3169920_-/TTTT chr11:3169919-3169920 TTTT ENSMUSG00000023764.18 ENSMUST00000156655.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034570.12 ENSMUST00000044507.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034570.12 ENSMUST00000044507.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034579.17 ENSMUST00000044682.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034579.17 ENSMUST00000044682.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034579.17 ENSMUST00000064265.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2268;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034579.17 ENSMUST00000064265.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2268;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034570.12 ENSMUST00000110018.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034570.12 ENSMUST00000110018.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034570.12 ENSMUST00000110019.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034570.12 ENSMUST00000110019.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034570.12 ENSMUST00000148939.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034570.12 ENSMUST00000148939.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034579.17 ENSMUST00000151860.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2271;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034579.17 ENSMUST00000151860.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2271;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034570.12 ENSMUST00000154756.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034570.12 ENSMUST00000154756.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 - ENSMUSG00000034570.12 ENSMUST00000183684.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2515;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3496434_AA/-/A chr11:3496434-3496435 A ENSMUSG00000034570.12 ENSMUST00000183684.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2515;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3583754_AAAT/- chr11:3583754-3583757 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_3744426_GAGA/- chr11:3744426-3744429 - ENSMUSG00000020435.17 ENSMUST00000070552.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3744426_GAGA/- chr11:3744426-3744429 - ENSMUSG00000020435.17 ENSMUST00000127371.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3744426_GAGA/- chr11:3744426-3744429 - ENSMUSG00000020435.17 ENSMUST00000135250.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3744426_GAGA/- chr11:3744426-3744429 - ENSMUSG00000020435.17 ENSMUST00000155197.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 - ENSMUSG00000020435.17 ENSMUST00000070552.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTG ENSMUSG00000020435.17 ENSMUST00000070552.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTGTGTG ENSMUSG00000020435.17 ENSMUST00000070552.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 - ENSMUSG00000020435.17 ENSMUST00000127371.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTG ENSMUSG00000020435.17 ENSMUST00000127371.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTGTGTG ENSMUSG00000020435.17 ENSMUST00000127371.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 - ENSMUSG00000020435.17 ENSMUST00000135250.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTG ENSMUSG00000020435.17 ENSMUST00000135250.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTGTGTG ENSMUSG00000020435.17 ENSMUST00000135250.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 - ENSMUSG00000020435.17 ENSMUST00000155197.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTG ENSMUSG00000020435.17 ENSMUST00000155197.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3759459_TGTGTG/-/TGTG/TGTGTGTG chr11:3759459-3759464 TGTGTGTG ENSMUSG00000020435.17 ENSMUST00000155197.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3925247_C/T chr11:3925247 T ENSMUSG00000020432.12 ENSMUST00000020710.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3925247_C/T chr11:3925247 T ENSMUSG00000020432.12 ENSMUST00000109988.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3925247_C/T chr11:3925247 T ENSMUSG00000020432.12 ENSMUST00000109989.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3925247_C/T chr11:3925247 T ENSMUSG00000020432.12 ENSMUST00000109990.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3925247_C/T chr11:3925247 T ENSMUSG00000020432.12 ENSMUST00000109991.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3925247_C/T chr11:3925247 T ENSMUSG00000020432.12 ENSMUST00000109992.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_3925247_C/T chr11:3925247 T ENSMUSG00000020432.12 ENSMUST00000109993.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4109803_TCTC/- chr11:4109803-4109806 - ENSMUSG00000003585.13 ENSMUST00000003681.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4109803_TCTC/- chr11:4109803-4109806 - ENSMUSG00000082364.1 ENSMUST00000119801.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1579;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4109803_TCTC/- chr11:4109803-4109806 - ENSMUSG00000003585.13 ENSMUST00000123901.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4109803_TCTC/- chr11:4109803-4109806 - ENSMUSG00000003585.13 ENSMUST00000132421.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=542;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4109803_TCTC/- chr11:4109803-4109806 - ENSMUSG00000003585.13 ENSMUST00000133631.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=792;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4109803_TCTC/- chr11:4109803-4109806 - ENSMUSG00000003585.13 ENSMUST00000145173.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1351;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4307718_GTGT/- chr11:4307718-4307721 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_4909105_CGA/TTT chr11:4909105-4909107 TTT ENSMUSG00000034274.11 ENSMUST00000038237.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4909105_CGA/TTT chr11:4909105-4909107 TTT ENSMUSG00000034274.11 ENSMUST00000101615.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4909105_CGA/TTT chr11:4909105-4909107 TTT ENSMUSG00000034274.11 ENSMUST00000142543.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4909105_CGA/TTT chr11:4909105-4909107 TTT ENSMUSG00000034274.11 ENSMUST00000144371.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_4909105_CGA/TTT chr11:4909105-4909107 TTT ENSMUSG00000034274.11 ENSMUST00000148117.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4640;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5374276_CACA/-/CA chr11:5374276-5374279 - ENSMUSG00000041961.14 ENSMUST00000109867.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5374276_CACA/-/CA chr11:5374276-5374279 CA ENSMUSG00000041961.14 ENSMUST00000109867.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5374276_CACA/-/CA chr11:5374276-5374279 - ENSMUSG00000041961.14 ENSMUST00000143746.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5374276_CACA/-/CA chr11:5374276-5374279 CA ENSMUSG00000041961.14 ENSMUST00000143746.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5374276_CACA/-/CA chr11:5374276-5374279 - ENSMUSG00000041961.14 ENSMUST00000172492.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5374276_CACA/-/CA chr11:5374276-5374279 CA ENSMUSG00000041961.14 ENSMUST00000172492.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5684321_AGAG/- chr11:5684321-5684324 - ENSMUSG00000020481.15 ENSMUST00000109856.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5907867_C/T chr11:5907867 T ENSMUSG00000041798.15 ENSMUST00000102920.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5907867_C/T chr11:5907867 T ENSMUSG00000041798.15 ENSMUST00000109822.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_5907867_C/T chr11:5907867 T ENSMUSG00000041798.15 ENSMUST00000109823.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000002817.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000019133.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000066431.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000090443.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000093355.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000101585.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000101586.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000109812.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000109813.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000109815.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000123391.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6006417_C/T chr11:6006417 T ENSMUSG00000057897.14 ENSMUST00000154197.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000002817.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000002817.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000019133.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000019133.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000066431.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000066431.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000090443.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000090443.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000093355.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000093355.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000101585.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000101585.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000101586.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000101586.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000109812.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000109812.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000109813.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000109813.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000109815.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000109815.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000123391.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000123391.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000129098.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000129098.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 - ENSMUSG00000057897.14 ENSMUST00000154197.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6049863_CACA/-/CA chr11:6049863-6049866 CA ENSMUSG00000057897.14 ENSMUST00000154197.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 - ENSMUSG00000053838.14 ENSMUST00000066496.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 AAA ENSMUSG00000053838.14 ENSMUST00000066496.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 - ENSMUSG00000083022.1 ENSMUST00000117476.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4915;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 AAA ENSMUSG00000083022.1 ENSMUST00000117476.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4915;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 - ENSMUSG00000053838.14 ENSMUST00000135631.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 AAA ENSMUSG00000053838.14 ENSMUST00000135631.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 - ENSMUSG00000053838.14 ENSMUST00000140700.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_6167728_AA/-/AAA chr11:6167728-6167729 AAA ENSMUSG00000053838.14 ENSMUST00000140700.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_7927363_T/C chr11:7927363 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_7941840_TT/-/T chr11:7941840-7941841 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_7941840_TT/-/T chr11:7941840-7941841 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_8896140_-/G chr11:8896139-8896140 G ENSMUSG00000046634.12 ENSMUST00000154153.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_8896140_-/G chr11:8896139-8896140 G ENSMUSG00000046634.12 ENSMUST00000178195.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_8980886_ACTCT/A/TCTCT chr11:8980886-8980890 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_8980886_ACTCT/A/TCTCT chr11:8980886-8980890 TCTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_9572489_AGAG/- chr11:9572489-9572492 - ENSMUSG00000004668.14 ENSMUST00000042740.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_9624791_TCTC/- chr11:9624791-9624794 - ENSMUSG00000004668.14 ENSMUST00000042740.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_9874992_C/A chr11:9874992 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_10650271_AAAA/- chr11:10650271-10650274 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_10723695_C/G chr11:10723695 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_10934094_C/A chr11:10934094 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_11244042_CTCT/- chr11:11244042-11244045 - ENSMUSG00000050830.17 ENSMUST00000056344.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11244042_CTCT/- chr11:11244042-11244045 - ENSMUSG00000050830.17 ENSMUST00000109681.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11244042_CTCT/- chr11:11244042-11244045 - ENSMUSG00000050830.17 ENSMUST00000129670.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000035455.12 ENSMUST00000047689.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=542;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000035455.12 ENSMUST00000047689.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=542;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000020182.16 ENSMUST00000066237.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4598;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000020182.16 ENSMUST00000066237.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4598;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000020182.16 ENSMUST00000109659.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4600;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000020182.16 ENSMUST00000109659.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4600;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000035455.12 ENSMUST00000109664.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=569;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000035455.12 ENSMUST00000109664.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=569;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000020182.16 ENSMUST00000136810.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4600;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000020182.16 ENSMUST00000136810.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4600;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000035455.12 ENSMUST00000150714.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=553;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000035455.12 ENSMUST00000150714.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=553;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000035455.12 ENSMUST00000152345.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=576;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000035455.12 ENSMUST00000152345.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=576;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000035455.12 ENSMUST00000171080.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000035455.12 ENSMUST00000171080.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000035455.12 ENSMUST00000171938.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000035455.12 ENSMUST00000171938.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 - ENSMUSG00000020182.16 ENSMUST00000178704.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4598;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_11809501_TTT/-/TT chr11:11809501-11809503 TT ENSMUSG00000020182.16 ENSMUST00000178704.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4598;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_12922154_TTCCT/- chr11:12922154-12922158 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_13193350_T/C chr11:13193350 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_14010780_-/AAAAAAAAAAAAAAAA chr11:14010779-14010780 AAAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_14257682_CACA/-/CACACA chr11:14257682-14257685 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_14257682_CACA/-/CACACA chr11:14257682-14257685 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_15495853_GTGT/- chr11:15495853-15495856 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_15970482_-/TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr11:15970481-15970482 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_17198198_C/A chr11:17198198 A ENSMUSG00000020116.7 ENSMUST00000020317.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=5000;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_17198198_C/A chr11:17198198 A ENSMUSG00000033953.10 ENSMUST00000102880.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_17198198_C/A chr11:17198198 A ENSMUSG00000078970.5 ENSMUST00000151431.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_17198198_C/A chr11:17198198 A ENSMUSG00000033953.10 ENSMUST00000154425.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3089;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_18082643_G/C chr11:18082643 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_18550566_AA/- chr11:18550566-18550567 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_18772190_TGTGTG/- chr11:18772190-18772195 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_19066801_TT/- chr11:19066801-19066802 - ENSMUSG00000086025.1 ENSMUST00000144854.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_19609076_AA/- chr11:19609076-19609077 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_19748834_A/-/AA chr11:19748834 - ENSMUSG00000083601.1 ENSMUST00000118065.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_19748834_A/-/AA chr11:19748834 AA ENSMUSG00000083601.1 ENSMUST00000118065.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_20055099_TTTT/- chr11:20055099-20055102 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_20582266_C/A chr11:20582266 A ENSMUSG00000049800.13 ENSMUST00000093292.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_20582266_C/A chr11:20582266 A ENSMUSG00000049800.13 ENSMUST00000145328.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_20582298_C/A chr11:20582298 A ENSMUSG00000049800.13 ENSMUST00000093292.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_20582298_C/A chr11:20582298 A ENSMUSG00000049800.13 ENSMUST00000145328.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_21022321_-/CTTT chr11:21022320-21022321 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_21057166_AC/- chr11:21057166-21057167 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_21327079_TTT/- chr11:21327079-21327081 - ENSMUSG00000001891.16 ENSMUST00000060895.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_21327079_TTT/- chr11:21327079-21327081 - ENSMUSG00000001891.16 ENSMUST00000102875.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_21327079_TTT/- chr11:21327079-21327081 - ENSMUSG00000001891.16 ENSMUST00000133343.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_21327079_TTT/- chr11:21327079-21327081 - ENSMUSG00000001891.16 ENSMUST00000143890.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3577;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_21586903_G/- chr11:21586903 - ENSMUSG00000020319.9 ENSMUST00000020568.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_21586903_G/- chr11:21586903 - ENSMUSG00000020319.9 ENSMUST00000131135.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_21586903_G/- chr11:21586903 - ENSMUSG00000020319.9 ENSMUST00000149757.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_23328796_A/C chr11:23328796 C ENSMUSG00000056342.16 ENSMUST00000137823.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_23328796_A/C chr11:23328796 C ENSMUSG00000056342.16 ENSMUST00000180046.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_23751437_T/- chr11:23751437 - ENSMUSG00000020275.9 ENSMUST00000102864.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_24018436_T/G chr11:24018436 G ENSMUSG00000104783.1 ENSMUST00000199670.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3677;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_24882176_T/C chr11:24882176 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_24882181_A/G chr11:24882181 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_25253147_T/A chr11:25253147 A ENSMUSG00000033015.16 ENSMUST00000191131.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26467607_C/T chr11:26467607 T ENSMUSG00000004018.9 ENSMUST00000004120.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26467607_C/T chr11:26467607 T ENSMUSG00000064090.14 ENSMUST00000078362.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3797;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26467607_C/T chr11:26467607 T ENSMUSG00000064090.14 ENSMUST00000109504.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3715;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26467607_C/T chr11:26467607 T ENSMUSG00000004018.9 ENSMUST00000109509.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26467607_C/T chr11:26467607 T ENSMUSG00000004018.9 ENSMUST00000134445.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=728;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26467607_C/T chr11:26467607 T ENSMUSG00000004018.9 ENSMUST00000143471.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26548888_GTGT/- chr11:26548888-26548891 - ENSMUSG00000064090.14 ENSMUST00000078362.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26548888_GTGT/- chr11:26548888-26548891 - ENSMUSG00000064090.14 ENSMUST00000109504.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26548888_GTGT/- chr11:26548888-26548891 - ENSMUSG00000064090.14 ENSMUST00000124294.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26548888_GTGT/- chr11:26548888-26548891 - ENSMUSG00000064090.14 ENSMUST00000133487.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26548888_GTGT/- chr11:26548888-26548891 - ENSMUSG00000064090.14 ENSMUST00000155728.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26548888_GTGT/- chr11:26548888-26548891 - ENSMUSG00000064090.14 ENSMUST00000156264.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_26618887_AA/- chr11:26618887-26618888 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_27654786_C/A chr11:27654786 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_27753504_CC/- chr11:27753504-27753505 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_28164394_AA/- chr11:28164394-28164395 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_28996437_ATATATAT/-/ATATAT chr11:28996437-28996444 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_28996437_ATATATAT/-/ATATAT chr11:28996437-28996444 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_29099275_CAA/C/AAA chr11:29099275-29099277 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_29099275_CAA/C/AAA chr11:29099275-29099277 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_29112059_AA/- chr11:29112059-29112060 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_29961881_G/A chr11:29961881 A ENSMUSG00000044072.14 ENSMUST00000058902.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_30414033_CT/TC chr11:30414033-30414034 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_30576750_A/C chr11:30576750 C ENSMUSG00000060923.5 ENSMUST00000074613.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_30576750_A/C chr11:30576750 C ENSMUSG00000081887.1 ENSMUST00000121523.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2296;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_31753054_CACA/-/CA/CACACA chr11:31753054-31753057 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_31753054_CACA/-/CA/CACACA chr11:31753054-31753057 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_31753054_CACA/-/CA/CACACA chr11:31753054-31753057 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_32152554_AA/-/A chr11:32152554-32152555 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_32152554_AA/-/A chr11:32152554-32152555 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_32191366_C/A chr11:32191366 A ENSMUSG00000020279.10 ENSMUST00000020518.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32191366_C/A chr11:32191366 A ENSMUSG00000020279.10 ENSMUST00000128311.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32191366_C/A chr11:32191366 A ENSMUSG00000020279.10 ENSMUST00000131979.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3302;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32191366_C/A chr11:32191366 A ENSMUSG00000020279.10 ENSMUST00000142396.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32191366_C/A chr11:32191366 A ENSMUSG00000020279.10 ENSMUST00000145401.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32390562_AA/- chr11:32390562-32390563 - ENSMUSG00000040711.7 ENSMUST00000038753.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32390562_AA/- chr11:32390562-32390563 - ENSMUSG00000040711.7 ENSMUST00000138771.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=262;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32521059_T/A chr11:32521059 A ENSMUSG00000044949.4 ENSMUST00000051053.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4372;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32521059_T/A chr11:32521059 A ENSMUSG00000044056.3 ENSMUST00000054327.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1692;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32521059_T/A chr11:32521059 A ENSMUSG00000044056.3 ENSMUST00000109377.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2281;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_32636419_TTTTTT/- chr11:32636419-32636424 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_33348305_TCCCCT/- chr11:33348305-33348310 - ENSMUSG00000040594.19 ENSMUST00000102815.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33348305_TCCCCT/- chr11:33348305-33348310 - ENSMUSG00000040594.19 ENSMUST00000129179.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33348305_TCCCCT/- chr11:33348305-33348310 - ENSMUSG00000040594.19 ENSMUST00000207401.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33348315_T/C chr11:33348315 C ENSMUSG00000040594.19 ENSMUST00000102815.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33348315_T/C chr11:33348315 C ENSMUSG00000040594.19 ENSMUST00000129179.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33348315_T/C chr11:33348315 C ENSMUSG00000040594.19 ENSMUST00000207401.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33459963_GG/-/G chr11:33459963-33459964 - ENSMUSG00000040594.19 ENSMUST00000102815.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33459963_GG/-/G chr11:33459963-33459964 G ENSMUSG00000040594.19 ENSMUST00000102815.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33459963_GG/-/G chr11:33459963-33459964 - ENSMUSG00000040594.19 ENSMUST00000129179.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33459963_GG/-/G chr11:33459963-33459964 G ENSMUSG00000040594.19 ENSMUST00000129179.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33778997_-/ACAC chr11:33778996-33778997 ACAC ENSMUSG00000053519.15 ENSMUST00000065970.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33778997_-/ACAC chr11:33778996-33778997 ACAC ENSMUSG00000053519.15 ENSMUST00000101368.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33778997_-/ACAC chr11:33778996-33778997 ACAC ENSMUSG00000053519.15 ENSMUST00000109340.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33778997_-/ACAC chr11:33778996-33778997 ACAC ENSMUSG00000053519.15 ENSMUST00000135034.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_33778997_-/ACAC chr11:33778996-33778997 ACAC ENSMUSG00000053519.15 ENSMUST00000154760.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_35053045_T/A chr11:35053045 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_35521061_ACACAC/- chr11:35521061-35521066 - ENSMUSG00000056427.10 ENSMUST00000069837.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_35725240_GGGGGAGGGGGAGGGGGAGGGGGA/- chr11:35725240-35725263 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_36089354_TT/- chr11:36089354-36089355 - ENSMUSG00000049336.16 ENSMUST00000057207.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_36089354_TT/- chr11:36089354-36089355 - ENSMUSG00000049336.16 ENSMUST00000102801.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_36089354_TT/- chr11:36089354-36089355 - ENSMUSG00000049336.16 ENSMUST00000163524.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_36522487_A/G chr11:36522487 G ENSMUSG00000049336.16 ENSMUST00000057207.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_36522487_A/G chr11:36522487 G ENSMUSG00000049336.16 ENSMUST00000102801.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_36522487_A/G chr11:36522487 G ENSMUSG00000049336.16 ENSMUST00000146113.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_36522487_A/G chr11:36522487 G ENSMUSG00000049336.16 ENSMUST00000149787.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_36522487_A/G chr11:36522487 G ENSMUSG00000049336.16 ENSMUST00000163524.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_37834874_G/C chr11:37834874 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_37893992_AA/- chr11:37893992-37893993 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_37934044_GTGT/- chr11:37934044-37934047 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_38909423_TC/CT chr11:38909423-38909424 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39025222_TT/-/TTT chr11:39025222-39025223 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39025222_TT/-/TTT chr11:39025222-39025223 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39202605_AAA/- chr11:39202605-39202607 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39383037_AAA/-/AA chr11:39383037-39383039 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39383037_AAA/-/AA chr11:39383037-39383039 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39454149_TTT/- chr11:39454149-39454151 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39510388_-/ATAG chr11:39510387-39510388 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39598330_ACAC/-/AC chr11:39598330-39598333 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_39598330_ACAC/-/AC chr11:39598330-39598333 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_41380920_T/A chr11:41380920 A ENSMUSG00000081112.1 ENSMUST00000121214.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2299;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_41429211_GAGAGA/- chr11:41429211-41429216 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_41811030_AA/- chr11:41811030-41811031 - ENSMUSG00000087306.7 ENSMUST00000155032.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_42420667_T/C chr11:42420667 C ENSMUSG00000007653.12 ENSMUST00000007797.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_42420667_T/C chr11:42420667 C ENSMUSG00000007653.12 ENSMUST00000136050.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=612;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_42420667_T/C chr11:42420667 C ENSMUSG00000007653.12 ENSMUST00000140463.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_42420667_T/C chr11:42420667 C ENSMUSG00000007653.12 ENSMUST00000143626.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=643;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_42420667_T/C chr11:42420667 C ENSMUSG00000007653.12 ENSMUST00000192403.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=683;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_43482397_AC/- chr11:43482397-43482398 - ENSMUSG00000046491.10 ENSMUST00000057679.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_43482397_AC/- chr11:43482397-43482398 - ENSMUSG00000046491.10 ENSMUST00000151912.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_43482397_AC/- chr11:43482397-43482398 - ENSMUSG00000046491.10 ENSMUST00000173002.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_43776849_CACACA/- chr11:43776849-43776854 - ENSMUSG00000050541.14 ENSMUST00000067258.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_43776849_CACACA/- chr11:43776849-43776854 - ENSMUSG00000050541.14 ENSMUST00000124306.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_43776849_CACACA/- chr11:43776849-43776854 - ENSMUSG00000050541.14 ENSMUST00000139906.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_43776849_CACACA/- chr11:43776849-43776854 - ENSMUSG00000050541.14 ENSMUST00000167574.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_44735549_AC/- chr11:44735549-44735550 - ENSMUSG00000057098.14 ENSMUST00000081265.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_44735549_AC/- chr11:44735549-44735550 - ENSMUSG00000057098.14 ENSMUST00000101326.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_44735549_AC/- chr11:44735549-44735550 - ENSMUSG00000057098.14 ENSMUST00000109268.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_45122934_GTGT/-/GT chr11:45122934-45122937 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_45122934_GTGT/-/GT chr11:45122934-45122937 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_45367827_A/T chr11:45367827 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_45443295_GTGT/-/GTGTGT chr11:45443295-45443298 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_45443295_GTGT/-/GTGTGT chr11:45443295-45443298 GTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_45724547_C/T chr11:45724547 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_45920042_A/T chr11:45920042 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 - ENSMUSG00000040405.13 ENSMUST00000047568.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3020;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 AAAAAAAAA ENSMUSG00000040405.13 ENSMUST00000047568.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3020;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 - ENSMUSG00000040405.13 ENSMUST00000081819.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 AAAAAAAAA ENSMUSG00000040405.13 ENSMUST00000081819.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 - ENSMUSG00000040405.13 ENSMUST00000109223.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2363;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 AAAAAAAAA ENSMUSG00000040405.13 ENSMUST00000109223.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2363;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 - ENSMUSG00000040405.13 ENSMUST00000109224.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46748147_AA/-/AAAAAAAAA chr11:46748147-46748148 AAAAAAAAA ENSMUSG00000040405.13 ENSMUST00000109224.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_46910914_C/A chr11:46910914 A ENSMUSG00000020354.15 ENSMUST00000109220.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_47150520_TCTC/- chr11:47150520-47150523 - ENSMUSG00000020354.15 ENSMUST00000077221.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_47150520_TCTC/- chr11:47150520-47150523 - ENSMUSG00000020354.15 ENSMUST00000109220.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_47913816_TT/-/T chr11:47913816-47913817 - ENSMUSG00000065804.1 ENSMUST00000083870.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1271;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_47913816_TT/-/T chr11:47913816-47913817 T ENSMUSG00000065804.1 ENSMUST00000083870.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1271;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_47913816_TT/-/T chr11:47913816-47913817 - ENSMUSG00000020354.15 ENSMUST00000128558.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_47913816_TT/-/T chr11:47913816-47913817 T ENSMUSG00000020354.15 ENSMUST00000128558.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48052293_T/- chr11:48052293 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_48052305_C/T chr11:48052305 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_48074067_-/AGAG chr11:48074066-48074067 AGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_48832467_TT/- chr11:48832467-48832468 - ENSMUSG00000040350.16 ENSMUST00000046903.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4997;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48832467_TT/- chr11:48832467-48832468 - ENSMUSG00000040350.16 ENSMUST00000109213.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48868103_CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT/- chr11:48868103-48868150 - ENSMUSG00000046879.7 ENSMUST00000049519.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48868103_CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT/- chr11:48868103-48868150 - ENSMUSG00000046879.7 ENSMUST00000097271.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48868103_CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT/- chr11:48868103-48868150 - ENSMUSG00000046879.7 ENSMUST00000147151.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48994329_C/G chr11:48994329 G ENSMUSG00000040328.15 ENSMUST00000056759.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48994329_C/G chr11:48994329 G ENSMUSG00000048852.13 ENSMUST00000059930.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2103;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48994329_C/G chr11:48994329 G ENSMUSG00000078922.9 ENSMUST00000068063.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2071;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48994329_C/G chr11:48994329 G ENSMUSG00000084153.2 ENSMUST00000119050.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2345;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48994329_C/G chr11:48994329 G ENSMUSG00000078922.9 ENSMUST00000132745.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1439;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48994329_C/G chr11:48994329 G ENSMUSG00000078922.9 ENSMUST00000146439.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=157;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_48994329_C/G chr11:48994329 G ENSMUSG00000040328.15 ENSMUST00000179282.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49652866_A/C chr11:49652866 C ENSMUSG00000020357.3 ENSMUST00000020617.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=127;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49939760_CTCT/-/CT chr11:49939760-49939763 - ENSMUSG00000020374.16 ENSMUST00000063444.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49939760_CTCT/-/CT chr11:49939760-49939763 CT ENSMUSG00000020374.16 ENSMUST00000063444.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49939760_CTCT/-/CT chr11:49939760-49939763 - ENSMUSG00000020374.16 ENSMUST00000093141.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49939760_CTCT/-/CT chr11:49939760-49939763 CT ENSMUSG00000020374.16 ENSMUST00000093141.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49939760_CTCT/-/CT chr11:49939760-49939763 - ENSMUSG00000020374.16 ENSMUST00000093142.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49939760_CTCT/-/CT chr11:49939760-49939763 CT ENSMUSG00000020374.16 ENSMUST00000093142.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 - ENSMUSG00000020374.16 ENSMUST00000063444.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 AC ENSMUSG00000020374.16 ENSMUST00000063444.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 - ENSMUSG00000020374.16 ENSMUST00000093141.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 AC ENSMUSG00000020374.16 ENSMUST00000093141.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 - ENSMUSG00000020374.16 ENSMUST00000093142.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 AC ENSMUSG00000020374.16 ENSMUST00000093142.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 - ENSMUSG00000020374.16 ENSMUST00000109172.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2908;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_49960874_ACAC/-/AC chr11:49960874-49960877 AC ENSMUSG00000020374.16 ENSMUST00000109172.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2908;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_50485281_T/A chr11:50485281 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_51318682_TGTG/-/TG chr11:51318682-51318685 - ENSMUSG00000063564.13 ENSMUST00000102765.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_51318682_TGTG/-/TG chr11:51318682-51318685 TG ENSMUSG00000063564.13 ENSMUST00000102765.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_51330412_TTTTT/-/TTTT chr11:51330412-51330416 - ENSMUSG00000063564.13 ENSMUST00000102765.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_51330412_TTTTT/-/TTTT chr11:51330412-51330416 TTTT ENSMUSG00000063564.13 ENSMUST00000102765.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_51487527_GGG/- chr11:51487527-51487529 - ENSMUSG00000063564.13 ENSMUST00000102765.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_51487531_GGGAGGGAGGGAGGGAGGGAAGAGGAAGGAGGGAGGAAGAGAAGGAAGGAGACAGGGAGGGAGGCAGGAAAAGAGGGAGGGAGGGAGGGAG/- chr11:51487531-51487621 - ENSMUSG00000063564.13 ENSMUST00000102765.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000063303.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000063321.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000109076.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3124;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000109077.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000109078.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2805;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000109079.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000109080.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000109081.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000120374.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000121591.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000128853.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000136021.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2839;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000143228.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000147874.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000150736.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000154701.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1759;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000097219.1 ENSMUST00000181262.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030688_C/T chr11:52030688 T ENSMUSG00000020389.19 ENSMUST00000207272.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2842;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000063303.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000063321.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000109076.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3129;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000109077.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000109078.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2810;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000109079.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000109080.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000109081.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000120374.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000121591.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000128853.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000136021.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2834;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000143228.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000147874.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000150736.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1669;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000154701.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1754;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000097219.1 ENSMUST00000181262.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52030693_G/A chr11:52030693 A ENSMUSG00000020389.19 ENSMUST00000207272.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2837;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52162018_C/T chr11:52162018 T ENSMUSG00000097219.1 ENSMUST00000181262.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52162018_C/T chr11:52162018 T ENSMUSG00000108218.2 ENSMUST00000203403.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_52429058_A/C chr11:52429058 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_52429062_ATT/CCC chr11:52429062-52429064 CCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_52576430_AGAG/- chr11:52576430-52576433 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_53012017_TGAGA/T/AGAGA chr11:53012017-53012021 T ENSMUSG00000036264.9 ENSMUST00000036796.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_53012017_TGAGA/T/AGAGA chr11:53012017-53012021 AGAGA ENSMUSG00000036264.9 ENSMUST00000036796.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 - ENSMUSG00000037533.19 ENSMUST00000094536.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 TTT ENSMUSG00000037533.19 ENSMUST00000094536.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 - ENSMUSG00000037533.19 ENSMUST00000101206.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 TTT ENSMUSG00000037533.19 ENSMUST00000101206.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 - ENSMUSG00000037533.19 ENSMUST00000102743.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 TTT ENSMUSG00000037533.19 ENSMUST00000102743.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 - ENSMUSG00000037533.19 ENSMUST00000108894.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 TTT ENSMUSG00000037533.19 ENSMUST00000108894.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 - ENSMUSG00000037533.19 ENSMUST00000207429.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54679128_TT/-/TTT chr11:54679128-54679129 TTT ENSMUSG00000037533.19 ENSMUST00000207429.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 - ENSMUSG00000052298.12 ENSMUST00000064104.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 CA ENSMUSG00000052298.12 ENSMUST00000064104.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 - ENSMUSG00000052298.12 ENSMUST00000135903.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 CA ENSMUSG00000052298.12 ENSMUST00000135903.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 - ENSMUSG00000052298.12 ENSMUST00000136059.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 CA ENSMUSG00000052298.12 ENSMUST00000136059.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 - ENSMUSG00000052298.12 ENSMUST00000153209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54777855_CACA/-/CA chr11:54777855-54777858 CA ENSMUSG00000052298.12 ENSMUST00000153209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 T ENSMUSG00000052298.12 ENSMUST00000064104.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 AA ENSMUSG00000052298.12 ENSMUST00000064104.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 T ENSMUSG00000052298.12 ENSMUST00000135903.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 AA ENSMUSG00000052298.12 ENSMUST00000135903.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 T ENSMUSG00000052298.12 ENSMUST00000136059.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 AA ENSMUSG00000052298.12 ENSMUST00000136059.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 T ENSMUSG00000052298.12 ENSMUST00000153209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54780074_TA/T/AA chr11:54780074-54780075 AA ENSMUSG00000052298.12 ENSMUST00000153209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54992944_TCCCTCCCCTGCACCTTCACACCTCTGCACCTCCATACCCCTGCACCAGC/- chr11:54992944-54992993 - ENSMUSG00000018340.13 ENSMUST00000102727.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54992944_TCCCTCCCCTGCACCTTCACACCTCTGCACCTCCATACCCCTGCACCAGC/- chr11:54992944-54992993 - ENSMUSG00000018340.13 ENSMUST00000108883.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_54992944_TCCCTCCCCTGCACCTTCACACCTCTGCACCTCCATACCCCTGCACCAGC/- chr11:54992944-54992993 - ENSMUSG00000018340.13 ENSMUST00000148298.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_55089180_T/- chr11:55089180 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_55621084_CACA/- chr11:55621084-55621087 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_55748945_C/- chr11:55748945 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_55748971_CA/TT chr11:55748971-55748972 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56032803_C/A chr11:56032803 A ENSMUSG00000037393.2 ENSMUST00000037682.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_56032803_C/A chr11:56032803 A ENSMUSG00000086020.1 ENSMUST00000134285.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_56183470_A/T chr11:56183470 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56183474_A/T chr11:56183474 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56186032_A/G chr11:56186032 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56232972_G/T chr11:56232972 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56294352_G/T chr11:56294352 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56587408_ACAC/- chr11:56587408-56587411 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56709289_A/- chr11:56709289 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56819220_T/G chr11:56819220 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56885812_A/G chr11:56885812 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56898356_TATATATA/-/TA chr11:56898356-56898363 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_56898356_TATATATA/-/TA chr11:56898356-56898363 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_57711677_GTGT/-/GT chr11:57711677-57711680 - ENSMUSG00000020520.14 ENSMUST00000066987.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_57711677_GTGT/-/GT chr11:57711677-57711680 GT ENSMUSG00000020520.14 ENSMUST00000066987.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_57711677_GTGT/-/GT chr11:57711677-57711680 - ENSMUSG00000020520.14 ENSMUST00000108846.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_57711677_GTGT/-/GT chr11:57711677-57711680 GT ENSMUSG00000020520.14 ENSMUST00000108846.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_57956463_CC/- chr11:57956463-57956464 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_57956467_CCCTCC/- chr11:57956467-57956472 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_58629580_TT/-/T chr11:58629580-58629581 - ENSMUSG00000043880.5 ENSMUST00000070804.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3536;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_58629580_TT/-/T chr11:58629580-58629581 T ENSMUSG00000043880.5 ENSMUST00000070804.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3536;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_58629580_TT/-/T chr11:58629580-58629581 - ENSMUSG00000043880.5 ENSMUST00000203173.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_58629580_TT/-/T chr11:58629580-58629581 T ENSMUSG00000043880.5 ENSMUST00000203173.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_58629580_TT/-/T chr11:58629580-58629581 - ENSMUSG00000043880.5 ENSMUST00000214132.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_58629580_TT/-/T chr11:58629580-58629581 T ENSMUSG00000043880.5 ENSMUST00000214132.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_59153068_GA/AC chr11:59153068-59153069 AC ENSMUSG00000049287.5 ENSMUST00000054523.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2300;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_59153085_C/- chr11:59153085 - ENSMUSG00000049287.5 ENSMUST00000054523.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2284;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_59708910_TCTTCT/- chr11:59708910-59708915 - ENSMUSG00000005417.17 ENSMUST00000066330.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_59708910_TCTTCT/- chr11:59708910-59708915 - ENSMUSG00000005417.17 ENSMUST00000072031.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_59708910_TCTTCT/- chr11:59708910-59708915 - ENSMUSG00000005417.17 ENSMUST00000108751.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_59708910_TCTTCT/- chr11:59708910-59708915 - ENSMUSG00000005417.17 ENSMUST00000116371.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_59708910_TCTTCT/- chr11:59708910-59708915 - ENSMUSG00000005417.17 ENSMUST00000138234.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_60543071_TT/- chr11:60543071-60543072 - ENSMUSG00000042650.3 ENSMUST00000044250.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_60543071_TT/- chr11:60543071-60543072 - ENSMUSG00000042650.3 ENSMUST00000134770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61008591_ACACAC/- chr11:61008591-61008596 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_61059307_TT/- chr11:61059307-61059308 - ENSMUSG00000042529.14 ENSMUST00000089184.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61197385_TGTG/- chr11:61197385-61197388 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_61297943_AGAGAG/-/AGAG chr11:61297943-61297948 - ENSMUSG00000069855.9 ENSMUST00000093029.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3683;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61297943_AGAGAG/-/AGAG chr11:61297943-61297948 AGAG ENSMUSG00000069855.9 ENSMUST00000093029.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3683;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61341092_CTCT/- chr11:61341092-61341095 - ENSMUSG00000010122.14 ENSMUST00000010267.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2306;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61341092_CTCT/- chr11:61341092-61341095 - ENSMUSG00000069855.9 ENSMUST00000093029.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61341092_CTCT/- chr11:61341092-61341095 - ENSMUSG00000010122.14 ENSMUST00000131723.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2307;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61341092_CTCT/- chr11:61341092-61341095 - ENSMUSG00000069855.9 ENSMUST00000134423.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61341092_CTCT/- chr11:61341092-61341095 - ENSMUSG00000069855.9 ENSMUST00000147450.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61588963_ACAC/-/AC chr11:61588963-61588966 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_61588963_ACAC/-/AC chr11:61588963-61588966 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_61750167_A/C chr11:61750167 C ENSMUSG00000020528.14 ENSMUST00000004955.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61750167_A/C chr11:61750167 C ENSMUSG00000020528.14 ENSMUST00000151966.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61750167_A/C chr11:61750167 C ENSMUSG00000020528.14 ENSMUST00000168115.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61750175_A/C chr11:61750175 C ENSMUSG00000020528.14 ENSMUST00000004955.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61750175_A/C chr11:61750175 C ENSMUSG00000020528.14 ENSMUST00000151966.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_61750175_A/C chr11:61750175 C ENSMUSG00000020528.14 ENSMUST00000168115.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 - ENSMUSG00000014245.8 ENSMUST00000014389.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 TA ENSMUSG00000014245.8 ENSMUST00000014389.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 TATATA ENSMUSG00000014245.8 ENSMUST00000014389.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 - ENSMUSG00000014245.8 ENSMUST00000147918.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 TA ENSMUSG00000014245.8 ENSMUST00000147918.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 TATATA ENSMUSG00000014245.8 ENSMUST00000147918.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 - ENSMUSG00000086310.1 ENSMUST00000153718.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 TA ENSMUSG00000086310.1 ENSMUST00000153718.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62498174_TATA/-/TA/TATATA chr11:62498174-62498177 TATATA ENSMUSG00000086310.1 ENSMUST00000153718.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62827513_ACAC/- chr11:62827513-62827516 - ENSMUSG00000047821.16 ENSMUST00000055006.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62827513_ACAC/- chr11:62827513-62827516 - ENSMUSG00000047821.16 ENSMUST00000072639.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62827513_ACAC/- chr11:62827513-62827516 - ENSMUSG00000047821.16 ENSMUST00000108703.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 A ENSMUSG00000090173.8 ENSMUST00000036085.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 CC ENSMUSG00000090173.8 ENSMUST00000036085.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 A ENSMUSG00000047821.16 ENSMUST00000072639.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2701;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 CC ENSMUSG00000047821.16 ENSMUST00000072639.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2701;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 A ENSMUSG00000090173.8 ENSMUST00000150989.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 CC ENSMUSG00000090173.8 ENSMUST00000150989.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 A ENSMUSG00000090173.8 ENSMUST00000175804.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2194;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 CC ENSMUSG00000090173.8 ENSMUST00000175804.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2194;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 A ENSMUSG00000090173.8 ENSMUST00000176577.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 CC ENSMUSG00000090173.8 ENSMUST00000176577.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 A ENSMUSG00000090173.8 ENSMUST00000177336.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_62853509_AC/A/CC chr11:62853509-62853510 CC ENSMUSG00000090173.8 ENSMUST00000177336.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_63193398_G/T chr11:63193398 T ENSMUSG00000085532.1 ENSMUST00000123420.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4944;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_63378062_GTGT/-/GT chr11:63378062-63378065 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_63378062_GTGT/-/GT chr11:63378062-63378065 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_63504695_TGTG/- chr11:63504695-63504698 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_63805550_C/T chr11:63805550 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_63928105_TT/- chr11:63928105-63928106 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_64363257_-/CTAT chr11:64363256-64363257 CTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_64679451_CACA/-/CACACA chr11:64679451-64679454 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_64679451_CACA/-/CACACA chr11:64679451-64679454 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_65081094_CACA/- chr11:65081094-65081097 - ENSMUSG00000033389.16 ENSMUST00000047463.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_65081094_CACA/- chr11:65081094-65081097 - ENSMUSG00000033389.16 ENSMUST00000093001.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_65081094_CACA/- chr11:65081094-65081097 - ENSMUSG00000033389.16 ENSMUST00000093002.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_65504313_AA/-/A chr11:65504313-65504314 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_65504313_AA/-/A chr11:65504313-65504314 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_66002797_ACACAC/- chr11:66002797-66002802 - ENSMUSG00000056752.16 ENSMUST00000080665.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_66002797_ACACAC/- chr11:66002797-66002802 - ENSMUSG00000056752.16 ENSMUST00000152386.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_67431140_T/C chr11:67431140 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_67877412_CTCT/- chr11:67877412-67877415 - ENSMUSG00000020905.11 ENSMUST00000021288.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_67877412_CTCT/- chr11:67877412-67877415 - ENSMUSG00000020905.11 ENSMUST00000108677.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_67877412_CTCT/- chr11:67877412-67877415 - ENSMUSG00000020905.11 ENSMUST00000129961.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=793;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_68357449_ATC/A/CTC chr11:68357449-68357451 A ENSMUSG00000020902.12 ENSMUST00000021284.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_68357449_ATC/A/CTC chr11:68357449-68357451 CTC ENSMUSG00000020902.12 ENSMUST00000021284.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_68357449_ATC/A/CTC chr11:68357449-68357451 A ENSMUSG00000020902.12 ENSMUST00000108674.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_68357449_ATC/A/CTC chr11:68357449-68357451 CTC ENSMUSG00000020902.12 ENSMUST00000108674.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 - ENSMUSG00000032782.19 ENSMUST00000092973.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 TG ENSMUSG00000032782.19 ENSMUST00000092973.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 - ENSMUSG00000032782.19 ENSMUST00000123176.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 TG ENSMUSG00000032782.19 ENSMUST00000123176.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 - ENSMUSG00000032782.19 ENSMUST00000130780.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3092;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 TG ENSMUSG00000032782.19 ENSMUST00000130780.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3092;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 - ENSMUSG00000087003.1 ENSMUST00000132834.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1129;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 TG ENSMUSG00000087003.1 ENSMUST00000132834.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1129;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 - ENSMUSG00000032782.19 ENSMUST00000156175.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4908;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 TG ENSMUSG00000032782.19 ENSMUST00000156175.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4908;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 - ENSMUSG00000032782.19 ENSMUST00000156671.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 TG ENSMUSG00000032782.19 ENSMUST00000156671.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2878;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 - ENSMUSG00000032782.19 ENSMUST00000176938.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2931;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69296606_TGTG/-/TG chr11:69296606-69296609 TG ENSMUSG00000032782.19 ENSMUST00000176938.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2931;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69388896_AAAAA/-/AAA chr11:69388896-69388900 - ENSMUSG00000044795.12 ENSMUST00000051620.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4712;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69388896_AAAAA/-/AAA chr11:69388896-69388900 AAA ENSMUSG00000044795.12 ENSMUST00000051620.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4712;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69388896_AAAAA/-/AAA chr11:69388896-69388900 - ENSMUSG00000044795.12 ENSMUST00000108660.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4363;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69388896_AAAAA/-/AAA chr11:69388896-69388900 AAA ENSMUSG00000044795.12 ENSMUST00000108660.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4363;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69388896_AAAAA/-/AAA chr11:69388896-69388900 - ENSMUSG00000044795.12 ENSMUST00000134903.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3025;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69388896_AAAAA/-/AAA chr11:69388896-69388900 AAA ENSMUSG00000044795.12 ENSMUST00000134903.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3025;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 - ENSMUSG00000044795.12 ENSMUST00000051620.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2986;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 TTT ENSMUSG00000044795.12 ENSMUST00000051620.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2986;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 - ENSMUSG00000044795.12 ENSMUST00000108660.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2637;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 TTT ENSMUSG00000044795.12 ENSMUST00000108660.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2637;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 - ENSMUSG00000044795.12 ENSMUST00000134903.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1299;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 TTT ENSMUSG00000044795.12 ENSMUST00000134903.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1299;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 - ENSMUSG00000059278.9 ENSMUST00000142126.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4861;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_69390623_TTTT/-/TTT chr11:69390623-69390626 TTT ENSMUSG00000059278.9 ENSMUST00000142126.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4861;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_70382370_GG/-/G chr11:70382370-70382371 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_70382370_GG/-/G chr11:70382370-70382371 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_71208420_C/T chr11:71208420 T ENSMUSG00000070390.12 ENSMUST00000094046.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_71208420_C/T chr11:71208420 T ENSMUSG00000070390.12 ENSMUST00000108516.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_71208420_C/T chr11:71208420 T ENSMUSG00000070390.12 ENSMUST00000136493.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_71325381_A/-/AA chr11:71325381 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_71325381_A/-/AA chr11:71325381 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_71942227_CTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCTTCTTCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTTCTGCTGCTGCTTCTGGTTCCTCATCTTTCTCTTTCTCCACCTGCTCCTTGTCCTCTCCCTCCTTTTCCTTCTCCTCCTCCTCCCCCTCCTT/- chr11:71942227-71942418 - ENSMUSG00000085528.1 ENSMUST00000128489.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2105;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_71973188_ACAC/- chr11:71973188-71973191 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_72754905_GAGA/- chr11:72754905-72754908 - ENSMUSG00000020790.14 ENSMUST00000102548.10 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_72754905_GAGA/- chr11:72754905-72754908 - ENSMUSG00000020790.14 ENSMUST00000127610.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_72754905_GAGA/- chr11:72754905-72754908 - ENSMUSG00000020790.14 ENSMUST00000155998.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_73033386_AGG/CCC chr11:73033386-73033388 CCC ENSMUSG00000020785.17 ENSMUST00000092937.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_73033386_AGG/CCC chr11:73033386-73033388 CCC ENSMUSG00000020785.17 ENSMUST00000145834.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_73033386_AGG/CCC chr11:73033386-73033388 CCC ENSMUSG00000020785.17 ENSMUST00000155720.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_73548988_TTT/-/TT chr11:73548988-73548990 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_73548988_TTT/-/TT chr11:73548988-73548990 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_73789899_TT/- chr11:73789899-73789900 - ENSMUSG00000069818.6 ENSMUST00000092919.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2024;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_73789899_TT/- chr11:73789899-73789900 - ENSMUSG00000069818.6 ENSMUST00000120081.2 Transcript 3_prime_UTR_variant 3057-3058 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_73789899_TT/- chr11:73789899-73789900 - ENSMUSG00000069818.6 ENSMUST00000206815.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2493;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_73789899_TT/- chr11:73789899-73789900 - ENSMUSG00000069818.6 ENSMUST00000215161.1 Transcript 3_prime_UTR_variant 3193-3194 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_74192270_CTCT/- chr11:74192270-74192273 - ENSMUSG00000070378.3 ENSMUST00000076675.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3232;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_74192270_CTCT/- chr11:74192270-74192273 - ENSMUSG00000070378.3 ENSMUST00000206114.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_74192270_CTCT/- chr11:74192270-74192273 - ENSMUSG00000070378.3 ENSMUST00000206247.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_74878322_-/TT chr11:74878321-74878322 TT ENSMUSG00000038351.14 ENSMUST00000057631.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_74878322_-/TT chr11:74878321-74878322 TT ENSMUSG00000038351.14 ENSMUST00000081799.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 - ENSMUSG00000078789.9 ENSMUST00000044949.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 AAAAAAAAAAAAAAAAGAAAAAAAAAAA ENSMUSG00000078789.9 ENSMUST00000044949.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 - ENSMUSG00000078789.9 ENSMUST00000139958.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 AAAAAAAAAAAAAAAAGAAAAAAAAAAA ENSMUSG00000078789.9 ENSMUST00000139958.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 - ENSMUSG00000078789.9 ENSMUST00000148944.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3538;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 AAAAAAAAAAAAAAAAGAAAAAAAAAAA ENSMUSG00000078789.9 ENSMUST00000148944.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3538;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 - ENSMUSG00000078789.9 ENSMUST00000156489.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3730;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75187053_A/-/AAAAAAAAAAAAAAAAGAAAAAAAAAAA chr11:75187053 AAAAAAAAAAAAAAAAGAAAAAAAAAAA ENSMUSG00000078789.9 ENSMUST00000156489.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3730;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 - ENSMUSG00000020849.13 ENSMUST00000067664.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 T ENSMUSG00000020849.13 ENSMUST00000067664.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 - ENSMUSG00000020849.13 ENSMUST00000131398.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 T ENSMUSG00000020849.13 ENSMUST00000131398.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 - ENSMUSG00000020849.13 ENSMUST00000134745.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 T ENSMUSG00000020849.13 ENSMUST00000134745.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 - ENSMUSG00000020849.13 ENSMUST00000153038.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 T ENSMUSG00000020849.13 ENSMUST00000153038.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 - ENSMUSG00000020849.13 ENSMUST00000155057.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2233;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 T ENSMUSG00000020849.13 ENSMUST00000155057.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2233;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 - ENSMUSG00000097051.1 ENSMUST00000181056.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_75749370_TT/-/T chr11:75749370-75749371 T ENSMUSG00000097051.1 ENSMUST00000181056.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76224534_TT/- chr11:76224534-76224535 - ENSMUSG00000017286.15 ENSMUST00000017430.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76224534_TT/- chr11:76224534-76224535 - ENSMUSG00000017286.15 ENSMUST00000169532.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76224534_TT/- chr11:76224534-76224535 - ENSMUSG00000017286.15 ENSMUST00000169701.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76224534_TT/- chr11:76224534-76224535 - ENSMUSG00000017286.15 ENSMUST00000170017.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76224534_TT/- chr11:76224534-76224535 - ENSMUSG00000017286.15 ENSMUST00000170710.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76604638_AAAA/- chr11:76604638-76604641 - ENSMUSG00000024205.7 ENSMUST00000136893.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3009;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76604638_AAAA/- chr11:76604638-76604641 - ENSMUSG00000017631.18 ENSMUST00000155035.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76604638_AAAA/- chr11:76604638-76604641 - ENSMUSG00000017631.18 ENSMUST00000176024.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_76638425_CTTT/- chr11:76638425-76638428 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_77080595_TCA/ACA/T chr11:77080595-77080597 ACA ENSMUSG00000065518.2 ENSMUST00000083584.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2423;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77080595_TCA/ACA/T chr11:77080595-77080597 T ENSMUSG00000065518.2 ENSMUST00000083584.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2423;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77080595_TCA/ACA/T chr11:77080595-77080597 ACA ENSMUSG00000037958.13 ENSMUST00000102494.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2160;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77080595_TCA/ACA/T chr11:77080595-77080597 T ENSMUSG00000037958.13 ENSMUST00000102494.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2160;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77080595_TCA/ACA/T chr11:77080595-77080597 ACA ENSMUSG00000037958.13 ENSMUST00000127758.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2558;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77080595_TCA/ACA/T chr11:77080595-77080597 T ENSMUSG00000037958.13 ENSMUST00000127758.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2558;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77080595_TCA/ACA/T chr11:77080595-77080597 ACA ENSMUSG00000037958.13 ENSMUST00000134685.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2160;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77080595_TCA/ACA/T chr11:77080595-77080597 T ENSMUSG00000037958.13 ENSMUST00000134685.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2160;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77095480_T/C chr11:77095480 C ENSMUSG00000050944.14 ENSMUST00000108400.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77095480_T/C chr11:77095480 C ENSMUSG00000050944.14 ENSMUST00000130901.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77095480_T/C chr11:77095480 C ENSMUSG00000050944.14 ENSMUST00000151731.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77889870_GAGGGGAGGGGAGGGGAGGG/- chr11:77889870-77889889 - ENSMUSG00000017453.4 ENSMUST00000017597.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77988309_AA/- chr11:77988309-77988310 - ENSMUSG00000037791.15 ENSMUST00000049167.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_77988309_AA/- chr11:77988309-77988310 - ENSMUSG00000037791.15 ENSMUST00000108360.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_78336062_TT/-/T/TTT chr11:78336062-78336063 - ENSMUSG00000041958.10 ENSMUST00000048073.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_78336062_TT/-/T/TTT chr11:78336062-78336063 T ENSMUSG00000041958.10 ENSMUST00000048073.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_78336062_TT/-/T/TTT chr11:78336062-78336063 TTT ENSMUSG00000041958.10 ENSMUST00000048073.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_78874149_GTGT/- chr11:78874149-78874152 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 - ENSMUSG00000020716.16 ENSMUST00000071325.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 TAT ENSMUSG00000020716.16 ENSMUST00000071325.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 - ENSMUSG00000070354.13 ENSMUST00000093983.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 TAT ENSMUSG00000070354.13 ENSMUST00000093983.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 - ENSMUSG00000020716.16 ENSMUST00000108251.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 TAT ENSMUSG00000020716.16 ENSMUST00000108251.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 - ENSMUSG00000070354.13 ENSMUST00000170422.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 TAT ENSMUSG00000070354.13 ENSMUST00000170422.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 - ENSMUSG00000093938.2 ENSMUST00000179322.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3866;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_79511185_TATTAT/-/TAT chr11:79511185-79511190 TAT ENSMUSG00000093938.2 ENSMUST00000179322.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3866;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_80043194_TT/- chr11:80043194-80043195 - ENSMUSG00000017561.16 ENSMUST00000061283.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3298;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_80043194_TT/- chr11:80043194-80043195 - ENSMUSG00000017561.16 ENSMUST00000103233.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3298;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_80043194_TT/- chr11:80043194-80043195 - ENSMUSG00000017561.16 ENSMUST00000177825.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4286;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_80043194_TT/- chr11:80043194-80043195 - ENSMUSG00000017561.16 ENSMUST00000178893.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4286;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_80318985_CC/- chr11:80318985-80318986 - ENSMUSG00000017692.8 ENSMUST00000017836.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_80318985_CC/- chr11:80318985-80318986 - ENSMUSG00000017692.8 ENSMUST00000138846.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=704;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_81273711_GG/- chr11:81273711-81273712 - ENSMUSG00000020704.13 ENSMUST00000066197.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_81456662_AGAG/- chr11:81456662-81456665 - ENSMUSG00000020704.13 ENSMUST00000066197.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_82009647_GA/- chr11:82009647-82009648 - ENSMUSG00000109297.1 ENSMUST00000207942.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_82475980_-/TCCCC chr11:82475979-82475980 TCCCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_82475987_T/C chr11:82475987 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_82589706_T/A chr11:82589706 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_82608878_A/T chr11:82608878 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_82657036_G/C chr11:82657036 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_83590481_G/C chr11:83590481 C ENSMUSG00000018927.3 ENSMUST00000019071.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_83590481_G/C chr11:83590481 C ENSMUSG00000051832.7 ENSMUST00000125626.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_83590481_G/C chr11:83590481 C ENSMUSG00000018927.3 ENSMUST00000138145.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_83590481_G/C chr11:83590481 C ENSMUSG00000051832.7 ENSMUST00000141082.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_83590481_G/C chr11:83590481 C ENSMUSG00000018927.3 ENSMUST00000150243.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 - ENSMUSG00000020532.18 ENSMUST00000103201.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 GT ENSMUSG00000020532.18 ENSMUST00000103201.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 - ENSMUSG00000020532.18 ENSMUST00000130012.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 GT ENSMUSG00000020532.18 ENSMUST00000130012.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 - ENSMUSG00000020532.18 ENSMUST00000133811.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 GT ENSMUSG00000020532.18 ENSMUST00000133811.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 - ENSMUSG00000020532.18 ENSMUST00000136463.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 GT ENSMUSG00000020532.18 ENSMUST00000136463.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 - ENSMUSG00000020532.18 ENSMUST00000137500.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 GT ENSMUSG00000020532.18 ENSMUST00000137500.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 - ENSMUSG00000020532.18 ENSMUST00000183548.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84182306_GTGT/-/GT chr11:84182306-84182309 GT ENSMUSG00000020532.18 ENSMUST00000183548.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_84414751_AAAA/-/AA chr11:84414751-84414754 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_84414751_AAAA/-/AA chr11:84414751-84414754 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_84921730_T/C chr11:84921730 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_86087003_-/A chr11:86087002-86087003 A ENSMUSG00000034329.16 ENSMUST00000044423.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_86314262_-/AAAT chr11:86314261-86314262 AAAT ENSMUSG00000034297.14 ENSMUST00000043624.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_86450439_TTT/-/TT/TTTT chr11:86450439-86450441 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_86450439_TTT/-/TT/TTTT chr11:86450439-86450441 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_86450439_TTT/-/TT/TTTT chr11:86450439-86450441 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_86645417_T/- chr11:86645417 - ENSMUSG00000018171.9 ENSMUST00000018315.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_86645417_T/- chr11:86645417 - ENSMUSG00000018171.9 ENSMUST00000127267.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87270758_AA/-/AAA chr11:87270758-87270759 - ENSMUSG00000046442.4 ENSMUST00000055438.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87270758_AA/-/AAA chr11:87270758-87270759 AAA ENSMUSG00000046442.4 ENSMUST00000055438.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87270758_AA/-/AAA chr11:87270758-87270759 - ENSMUSG00000046442.4 ENSMUST00000155154.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87270758_AA/-/AAA chr11:87270758-87270759 AAA ENSMUSG00000046442.4 ENSMUST00000155154.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87371304_-/TATA chr11:87371303-87371304 TATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_87467446_C/A chr11:87467446 A ENSMUSG00000010342.16 ENSMUST00000060835.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87467446_C/A chr11:87467446 A ENSMUSG00000083894.1 ENSMUST00000118342.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=233;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87467446_C/A chr11:87467446 A ENSMUSG00000010342.16 ENSMUST00000156483.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87467446_C/A chr11:87467446 A ENSMUSG00000098641.1 ENSMUST00000184171.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4946;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87467446_C/A chr11:87467446 A ENSMUSG00000098925.1 ENSMUST00000185073.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3922;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87467446_C/A chr11:87467446 A ENSMUSG00000105115.1 ENSMUST00000196353.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3922;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_87467446_C/A chr11:87467446 A ENSMUSG00000104896.1 ENSMUST00000199460.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4945;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88195663_AT/- chr11:88195663-88195664 - ENSMUSG00000018378.13 ENSMUST00000018522.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88195663_AT/- chr11:88195663-88195664 - ENSMUSG00000018378.13 ENSMUST00000125297.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2659;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88195663_AT/- chr11:88195663-88195664 - ENSMUSG00000018378.13 ENSMUST00000154812.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88195666_-/CA chr11:88195665-88195666 CA ENSMUSG00000018378.13 ENSMUST00000018522.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1525;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88195666_-/CA chr11:88195665-88195666 CA ENSMUSG00000018378.13 ENSMUST00000125297.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2661;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88195666_-/CA chr11:88195665-88195666 CA ENSMUSG00000018378.13 ENSMUST00000154812.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1525;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88754097_G/A chr11:88754097 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_88774589_ACAC/-/AC chr11:88774589-88774592 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_88774589_ACAC/-/AC chr11:88774589-88774592 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_88802167_AAAAA/-/AAAAAA chr11:88802167-88802171 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_88802167_AAAAA/-/AAAAAA chr11:88802167-88802171 AAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_88813624_G/A chr11:88813624 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_88922316_C/A chr11:88922316 A ENSMUSG00000000278.10 ENSMUST00000000287.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1704;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88922316_C/A chr11:88922316 A ENSMUSG00000087338.2 ENSMUST00000139592.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88922321_C/G chr11:88922321 G ENSMUSG00000000278.10 ENSMUST00000000287.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1699;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_88922321_C/G chr11:88922321 G ENSMUSG00000087338.2 ENSMUST00000139592.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_90572832_TGTG/- chr11:90572832-90572835 - ENSMUSG00000020546.14 ENSMUST00000020858.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_90572832_TGTG/- chr11:90572832-90572835 - ENSMUSG00000020546.14 ENSMUST00000143203.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_90873019_CACA/-/CA chr11:90873019-90873022 - ENSMUSG00000085940.1 ENSMUST00000142521.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_90873019_CACA/-/CA chr11:90873019-90873022 CA ENSMUSG00000085940.1 ENSMUST00000142521.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_90993266_-/TCTA chr11:90993265-90993266 TCTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_91167490_A/G chr11:91167490 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_92054375_CACA/-/CA chr11:92054375-92054378 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_92054375_CACA/-/CA chr11:92054375-92054378 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_92370183_-/AGAGAGAGAGAGAGAGAGAGAGAGAG chr11:92370182-92370183 AGAGAGAGAGAGAGAGAGAGAGAGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_92453870_CACA/- chr11:92453870-92453873 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_93044039_ACACAC/-/ACAC chr11:93044039-93044044 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_93044039_ACACAC/-/ACAC chr11:93044039-93044044 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 - ENSMUSG00000056158.14 ENSMUST00000042943.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 TCTCTC ENSMUSG00000056158.14 ENSMUST00000042943.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 - ENSMUSG00000056158.14 ENSMUST00000107858.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 TCTCTC ENSMUSG00000056158.14 ENSMUST00000107858.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 - ENSMUSG00000056158.14 ENSMUST00000107861.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 TCTCTC ENSMUSG00000056158.14 ENSMUST00000107861.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 - ENSMUSG00000056158.14 ENSMUST00000107863.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93432311_TCTC/-/TCTCTC chr11:93432311-93432314 TCTCTC ENSMUSG00000056158.14 ENSMUST00000107863.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93954746_-/T chr11:93954745-93954746 T ENSMUSG00000020857.11 ENSMUST00000021217.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93954746_-/T chr11:93954745-93954746 T ENSMUSG00000037601.11 ENSMUST00000021220.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4726;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93954746_-/T chr11:93954745-93954746 T ENSMUSG00000020857.11 ENSMUST00000072566.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93954746_-/T chr11:93954745-93954746 T ENSMUSG00000037601.11 ENSMUST00000135884.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2233;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93954746_-/T chr11:93954745-93954746 T ENSMUSG00000091228.1 ENSMUST00000170303.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_93978098_AA/- chr11:93978098-93978099 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000021226.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000021226.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000021226.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000107820.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000107820.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000107820.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000107821.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000107821.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000107821.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000107822.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000107822.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000107822.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000132623.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000132623.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000132623.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000135311.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1919;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000135311.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1919;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000135311.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1919;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000138369.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1871;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000138369.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1871;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000138369.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1871;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000165620.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1960;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000165620.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1960;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000165620.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1960;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000166312.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000166312.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000166312.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 - ENSMUSG00000020863.15 ENSMUST00000171033.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1911;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AA ENSMUSG00000020863.15 ENSMUST00000171033.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1911;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94295094_AAA/-/AA/AAAA chr11:94295094-94295096 AAAA ENSMUSG00000020863.15 ENSMUST00000171033.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1911;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94305299_AA/- chr11:94305299-94305300 - ENSMUSG00000020863.15 ENSMUST00000021226.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94305299_AA/- chr11:94305299-94305300 - ENSMUSG00000020863.15 ENSMUST00000107820.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94305299_AA/- chr11:94305299-94305300 - ENSMUSG00000020863.15 ENSMUST00000107821.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94305299_AA/- chr11:94305299-94305300 - ENSMUSG00000020863.15 ENSMUST00000107822.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94305299_AA/- chr11:94305299-94305300 - ENSMUSG00000020863.15 ENSMUST00000166312.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000021234.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000100561.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000103166.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107785.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107786.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107788.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107789.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107790.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107791.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107792.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000107793.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000133000.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=66;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000142190.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=828;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94425171_TCTC/- chr11:94425171-94425174 - ENSMUSG00000020866.17 ENSMUST00000152811.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1778;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94479735_CACA/- chr11:94479735-94479738 - ENSMUSG00000020867.13 ENSMUST00000041705.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94479735_CACA/- chr11:94479735-94479738 - ENSMUSG00000020867.13 ENSMUST00000125310.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4870;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94479735_CACA/- chr11:94479735-94479738 - ENSMUSG00000020867.13 ENSMUST00000134332.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94479735_CACA/- chr11:94479735-94479738 - ENSMUSG00000020867.13 ENSMUST00000136362.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3615;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94479735_CACA/- chr11:94479735-94479738 - ENSMUSG00000020867.13 ENSMUST00000151707.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3348;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000010080.15 ENSMUST00000010224.13 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000039110.14 ENSMUST00000040692.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000039110.14 ENSMUST00000093945.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000039110.14 ENSMUST00000123496.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000010080.15 ENSMUST00000127305.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000039110.14 ENSMUST00000139432.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000010080.15 ENSMUST00000142992.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1388;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000039110.14 ENSMUST00000149872.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3368;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94499638_A/C chr11:94499638 C ENSMUSG00000010080.15 ENSMUST00000150526.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=518;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94603552_GA/TT chr11:94603552-94603553 TT ENSMUSG00000076435.3 ENSMUST00000103164.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1681;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94603552_GA/TT chr11:94603552-94603553 TT ENSMUSG00000082945.1 ENSMUST00000117457.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3849;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94603552_GA/TT chr11:94603552-94603553 TT ENSMUSG00000076435.3 ENSMUST00000155122.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_94909578_T/A chr11:94909578 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_95049820_-/A chr11:95049819-95049820 A ENSMUSG00000001507.16 ENSMUST00000001548.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_95049820_-/A chr11:95049819-95049820 A ENSMUSG00000001507.16 ENSMUST00000107739.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_95049820_-/A chr11:95049819-95049820 A ENSMUSG00000001507.16 ENSMUST00000120375.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_95049820_-/A chr11:95049819-95049820 A ENSMUSG00000001507.16 ENSMUST00000141693.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3405;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_95100405_TGTG/- chr11:95100405-95100408 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_95790248_CACA/- chr11:95790248-95790251 - ENSMUSG00000075595.9 ENSMUST00000133070.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_95972983_GTGTGT/- chr11:95972983-95972988 - ENSMUSG00000013415.9 ENSMUST00000013559.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_95972983_GTGTGT/- chr11:95972983-95972988 - ENSMUSG00000013415.9 ENSMUST00000146586.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=991;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_95972983_GTGTGT/- chr11:95972983-95972988 - ENSMUSG00000013415.9 ENSMUST00000152896.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=156;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96298844_GAGAGAGAGAGA/- chr11:96298844-96298855 - ENSMUSG00000000690.5 ENSMUST00000000704.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=316;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96298844_GAGAGAGAGAGA/- chr11:96298844-96298855 - ENSMUSG00000038700.4 ENSMUST00000049272.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4657;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96298844_GAGAGAGAGAGA/- chr11:96298844-96298855 - ENSMUSG00000085645.1 ENSMUST00000140952.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96298844_GAGAGAGAGAGA/- chr11:96298844-96298855 - ENSMUSG00000085645.1 ENSMUST00000150698.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96298844_GAGAGAGAGAGA/- chr11:96298844-96298855 - ENSMUSG00000000690.5 ENSMUST00000173432.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96298844_GAGAGAGAGAGA/- chr11:96298844-96298855 - ENSMUSG00000038700.4 ENSMUST00000190470.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4481;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96446222_T/C chr11:96446222 C ENSMUSG00000075586.4 ENSMUST00000153012.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2101;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96726200_TCTC/- chr11:96726200-96726203 - ENSMUSG00000057058.16 ENSMUST00000071510.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96726200_TCTC/- chr11:96726200-96726203 - ENSMUSG00000057058.16 ENSMUST00000100521.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96726200_TCTC/- chr11:96726200-96726203 - ENSMUSG00000057058.16 ENSMUST00000103154.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96726200_TCTC/- chr11:96726200-96726203 - ENSMUSG00000057058.16 ENSMUST00000136836.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96726200_TCTC/- chr11:96726200-96726203 - ENSMUSG00000097289.1 ENSMUST00000181758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96925387_-/TGTG chr11:96925386-96925387 TGTG ENSMUSG00000047040.9 ENSMUST00000054311.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3915;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96925387_-/TGTG chr11:96925386-96925387 TGTG ENSMUSG00000047040.9 ENSMUST00000062172.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4007;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96925387_-/TGTG chr11:96925386-96925387 TGTG ENSMUSG00000047040.9 ENSMUST00000107636.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3937;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96925387_-/TGTG chr11:96925386-96925387 TGTG ENSMUSG00000078700.10 ENSMUST00000131501.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96925387_-/TGTG chr11:96925386-96925387 TGTG ENSMUSG00000047040.9 ENSMUST00000132865.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2717;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_96925387_-/TGTG chr11:96925386-96925387 TGTG ENSMUSG00000085307.1 ENSMUST00000134436.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2893;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000001441.13 ENSMUST00000001480.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1933;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000086680.2 ENSMUST00000133160.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000001441.13 ENSMUST00000154917.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2101;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000001441.13 ENSMUST00000163950.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2017;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000001441.13 ENSMUST00000165216.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2139;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000001441.13 ENSMUST00000167806.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2085;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000001441.13 ENSMUST00000168743.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2163;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97282571_C/T chr11:97282571 T ENSMUSG00000001441.13 ENSMUST00000172108.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2001;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97304467_AA/-/AAA chr11:97304467-97304468 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_97304467_AA/-/AAA chr11:97304467-97304468 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_97557084_G/A chr11:97557084 A ENSMUSG00000038453.16 ENSMUST00000107590.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97557084_G/A chr11:97557084 A ENSMUSG00000038453.16 ENSMUST00000107593.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97557084_G/A chr11:97557084 A ENSMUSG00000038453.16 ENSMUST00000107596.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97557084_G/A chr11:97557084 A ENSMUSG00000038453.16 ENSMUST00000126287.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97557084_G/A chr11:97557084 A ENSMUSG00000038453.16 ENSMUST00000142123.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97557084_G/A chr11:97557084 A ENSMUSG00000038453.16 ENSMUST00000207653.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97948574_ACAC/- chr11:97948574-97948577 - ENSMUSG00000017417.14 ENSMUST00000017561.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97948574_ACAC/- chr11:97948574-97948577 - ENSMUSG00000017417.14 ENSMUST00000107565.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_97948574_ACAC/- chr11:97948574-97948577 - ENSMUSG00000017417.14 ENSMUST00000141708.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98348046_A/C chr11:98348046 C ENSMUSG00000061718.12 ENSMUST00000078694.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=358;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98348046_A/C chr11:98348046 C ENSMUSG00000061718.12 ENSMUST00000132443.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2809;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98348046_A/C chr11:98348046 C ENSMUSG00000061718.12 ENSMUST00000133700.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3443;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98348046_A/C chr11:98348046 C ENSMUSG00000061718.12 ENSMUST00000137634.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1950;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98348046_A/C chr11:98348046 C ENSMUSG00000085944.1 ENSMUST00000141929.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2672;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98348046_A/C chr11:98348046 C ENSMUSG00000061718.12 ENSMUST00000147415.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3169;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98348046_A/C chr11:98348046 C ENSMUSG00000061718.12 ENSMUST00000150762.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1950;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98364793_TGTG/- chr11:98364793-98364796 - ENSMUSG00000018167.10 ENSMUST00000018311.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98364793_TGTG/- chr11:98364793-98364796 - ENSMUSG00000018167.10 ENSMUST00000152559.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98364793_TGTG/- chr11:98364793-98364796 - ENSMUSG00000018167.10 ENSMUST00000154960.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98364793_TGTG/- chr11:98364793-98364796 - ENSMUSG00000018167.10 ENSMUST00000155063.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98464477_C/T chr11:98464477 T ENSMUSG00000018168.8 ENSMUST00000103141.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=425;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98464477_C/T chr11:98464477 T ENSMUSG00000018168.8 ENSMUST00000153902.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2781;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98600408_GAGA/- chr11:98600408-98600411 - ENSMUSG00000086545.4 ENSMUST00000142268.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=822;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_98611108_T/A chr11:98611108 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_99331165_TAC/T/CAC chr11:99331165-99331167 T ENSMUSG00000075570.2 ENSMUST00000100482.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99331165_TAC/T/CAC chr11:99331165-99331167 CAC ENSMUSG00000075570.2 ENSMUST00000100482.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99331165_TAC/T/CAC chr11:99331165-99331167 T ENSMUSG00000075570.2 ENSMUST00000148770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99331165_TAC/T/CAC chr11:99331165-99331167 CAC ENSMUSG00000075570.2 ENSMUST00000148770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99337283_TT/- chr11:99337283-99337284 - ENSMUSG00000075570.2 ENSMUST00000100482.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99337283_TT/- chr11:99337283-99337284 - ENSMUSG00000075570.2 ENSMUST00000148770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99508641_GAGA/- chr11:99508641-99508644 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_99581586_TT/- chr11:99581586-99581587 - ENSMUSG00000047253.4 ENSMUST00000054532.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99581586_TT/- chr11:99581586-99581587 - ENSMUSG00000075567.4 ENSMUST00000100479.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1475;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99647320_-/ATTATT chr11:99647319-99647320 ATTATT ENSMUSG00000045109.6 ENSMUST00000055121.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3230;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99647320_-/ATTATT chr11:99647319-99647320 ATTATT ENSMUSG00000078130.4 ENSMUST00000073126.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2340;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_99647320_-/ATTATT chr11:99647319-99647320 ATTATT ENSMUSG00000078130.4 ENSMUST00000104929.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2279;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_100380701_G/- chr11:100380701 - ENSMUSG00000001552.14 ENSMUST00000001592.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_100380701_G/- chr11:100380701 - ENSMUSG00000001552.14 ENSMUST00000107403.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_100380701_G/- chr11:100380701 - ENSMUSG00000001552.14 ENSMUST00000123903.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2703;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_100380701_G/- chr11:100380701 - ENSMUSG00000001552.14 ENSMUST00000128268.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2694;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_100380701_G/- chr11:100380701 - ENSMUSG00000001552.14 ENSMUST00000149798.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=596;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_100380701_G/- chr11:100380701 - ENSMUSG00000001552.14 ENSMUST00000155746.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2614;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000107282.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=590;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000122006.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=404;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000128260.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000129680.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=404;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000138229.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=404;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000149006.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=970;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000149585.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=404;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101248654_T/A chr11:101248654 A ENSMUSG00000001240.13 ENSMUST00000151830.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1018;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101463120_AA/- chr11:101463120-101463121 - ENSMUSG00000010358.13 ENSMUST00000010502.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4422;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101463120_AA/- chr11:101463120-101463121 - ENSMUSG00000034993.7 ENSMUST00000040430.7 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101463120_AA/- chr11:101463120-101463121 - ENSMUSG00000010358.13 ENSMUST00000125958.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4995;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101463120_AA/- chr11:101463120-101463121 - ENSMUSG00000010358.13 ENSMUST00000131024.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4656;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101463120_AA/- chr11:101463120-101463121 - ENSMUSG00000001313.12 ENSMUST00000134980.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2363;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101463120_AA/- chr11:101463120-101463121 - ENSMUSG00000001313.12 ENSMUST00000153185.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1878;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101626283_G/A chr11:101626283 A ENSMUSG00000010362.9 ENSMUST00000010506.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1659;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101626283_G/A chr11:101626283 A ENSMUSG00000065767.1 ENSMUST00000083833.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1083;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101626283_G/A chr11:101626283 A ENSMUSG00000010362.9 ENSMUST00000133727.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2106;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101626283_G/A chr11:101626283 A ENSMUSG00000010362.9 ENSMUST00000139037.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1689;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101626283_G/A chr11:101626283 A ENSMUSG00000010362.9 ENSMUST00000152484.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=912;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101764964_CACACA/- chr11:101764964-101764969 - ENSMUSG00000017724.14 ENSMUST00000017868.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4778;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101764964_CACACA/- chr11:101764964-101764969 - ENSMUSG00000034931.15 ENSMUST00000039152.13 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101764964_CACACA/- chr11:101764964-101764969 - ENSMUSG00000017724.14 ENSMUST00000107176.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4778;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101764964_CACACA/- chr11:101764964-101764969 - ENSMUSG00000034931.15 ENSMUST00000129741.1 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_101764964_CACACA/- chr11:101764964-101764969 - ENSMUSG00000017724.14 ENSMUST00000164750.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102333682_-/AAACCAAACCA chr11:102333681-102333682 AAACCAAACCA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020928.14 ENSMUST00000021302.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=619;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020928.14 ENSMUST00000021302.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=619;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020929.14 ENSMUST00000021306.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2796;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020929.14 ENSMUST00000021306.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2796;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020929.14 ENSMUST00000107060.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2796;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020929.14 ENSMUST00000107060.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2796;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020928.14 ENSMUST00000107072.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=769;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020928.14 ENSMUST00000107072.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=769;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020928.14 ENSMUST00000107073.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=172;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020928.14 ENSMUST00000107073.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=172;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020929.14 ENSMUST00000132543.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3161;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020929.14 ENSMUST00000132543.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3161;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020929.14 ENSMUST00000141273.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4534;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020929.14 ENSMUST00000141273.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4534;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020929.14 ENSMUST00000143323.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020929.14 ENSMUST00000143323.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020929.14 ENSMUST00000172611.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2800;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020929.14 ENSMUST00000172611.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2800;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 - ENSMUSG00000020929.14 ENSMUST00000173679.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3124;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102835674_GTGT/-/GT chr11:102835674-102835677 GT ENSMUSG00000020929.14 ENSMUST00000173679.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3124;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000020929.14 ENSMUST00000021306.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000020929.14 ENSMUST00000107060.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000020929.14 ENSMUST00000123833.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000020929.14 ENSMUST00000138483.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000020929.14 ENSMUST00000147368.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000020929.14 ENSMUST00000148209.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4319;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000020929.14 ENSMUST00000173679.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872645_A/G chr11:102872645 G ENSMUSG00000097410.1 ENSMUST00000181125.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000020929.14 ENSMUST00000021306.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000020929.14 ENSMUST00000107060.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000020929.14 ENSMUST00000123833.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000020929.14 ENSMUST00000138483.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000020929.14 ENSMUST00000147368.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000020929.14 ENSMUST00000148209.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4301;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000020929.14 ENSMUST00000173679.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_102872663_A/G chr11:102872663 G ENSMUSG00000097410.1 ENSMUST00000181125.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_103291857_-/TG chr11:103291856-103291857 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_103842663_A/C chr11:103842663 C ENSMUSG00000034187.18 ENSMUST00000103075.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_103901644_CACA/- chr11:103901644-103901647 - ENSMUSG00000034187.18 ENSMUST00000103075.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_103901644_CACA/- chr11:103901644-103901647 - ENSMUSG00000034187.18 ENSMUST00000145126.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_104069564_-/AAGA chr11:104069563-104069564 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_104500701_TT/- chr11:104500701-104500702 - ENSMUSG00000020687.13 ENSMUST00000093923.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2043;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_104500701_TT/- chr11:104500701-104500702 - ENSMUSG00000020687.13 ENSMUST00000106962.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4235;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_104607221_-/TTTA chr11:104607220-104607221 TTTA ENSMUSG00000020689.4 ENSMUST00000021028.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=779;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_104903716_-/AA chr11:104903715-104903716 AA ENSMUSG00000040838.10 ENSMUST00000212287.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000015107.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000015107.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000092537.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000092537.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000106939.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000106939.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000106941.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000106941.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000126054.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000126054.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000126175.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000126175.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000145048.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000145048.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 - ENSMUSG00000020694.17 ENSMUST00000149459.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105189914_GTGT/-/GT chr11:105189914-105189917 GT ENSMUSG00000020694.17 ENSMUST00000149459.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105272409_CTCT/- chr11:105272409-105272412 - ENSMUSG00000020694.17 ENSMUST00000015107.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105272409_CTCT/- chr11:105272409-105272412 - ENSMUSG00000020694.17 ENSMUST00000092537.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105272409_CTCT/- chr11:105272409-105272412 - ENSMUSG00000020694.17 ENSMUST00000106939.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105272409_CTCT/- chr11:105272409-105272412 - ENSMUSG00000020694.17 ENSMUST00000106941.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105272409_CTCT/- chr11:105272409-105272412 - ENSMUSG00000020694.17 ENSMUST00000126175.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105272409_CTCT/- chr11:105272409-105272412 - ENSMUSG00000020694.17 ENSMUST00000145048.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105272409_CTCT/- chr11:105272409-105272412 - ENSMUSG00000020694.17 ENSMUST00000146910.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1253;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105652065_TGTG/- chr11:105652065-105652068 - ENSMUSG00000053580.16 ENSMUST00000100330.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105652065_TGTG/- chr11:105652065-105652068 - ENSMUSG00000053580.16 ENSMUST00000124367.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_105652065_TGTG/- chr11:105652065-105652068 - ENSMUSG00000053580.16 ENSMUST00000168598.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106079167_AA/-/A chr11:106079167-106079168 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_106079167_AA/-/A chr11:106079167-106079168 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_106146479_TTTTT/-/TTTTTT chr11:106146479-106146483 - ENSMUSG00000020700.11 ENSMUST00000002044.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106146479_TTTTT/-/TTTTTT chr11:106146479-106146483 TTTTTT ENSMUSG00000020700.11 ENSMUST00000002044.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106146479_TTTTT/-/TTTTTT chr11:106146479-106146483 - ENSMUSG00000020700.11 ENSMUST00000129793.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4729;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106146479_TTTTT/-/TTTTTT chr11:106146479-106146483 TTTTTT ENSMUSG00000020700.11 ENSMUST00000129793.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4729;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106999628_T/G chr11:106999628 G ENSMUSG00000018362.14 ENSMUST00000018506.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=87;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106999628_T/G chr11:106999628 G ENSMUSG00000018362.14 ENSMUST00000106768.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=259;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106999628_T/G chr11:106999628 G ENSMUSG00000083356.1 ENSMUST00000119530.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4281;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106999628_T/G chr11:106999628 G ENSMUSG00000018362.14 ENSMUST00000124541.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1141;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106999628_T/G chr11:106999628 G ENSMUSG00000018362.14 ENSMUST00000140362.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=849;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106999628_T/G chr11:106999628 G ENSMUSG00000018362.14 ENSMUST00000144834.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=178;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_106999628_T/G chr11:106999628 G ENSMUSG00000018362.14 ENSMUST00000145331.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=188;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_107311855_CACA/- chr11:107311855-107311858 - ENSMUSG00000040430.18 ENSMUST00000040380.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_107311855_CACA/- chr11:107311855-107311858 - ENSMUSG00000040430.18 ENSMUST00000103064.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_107311855_CACA/- chr11:107311855-107311858 - ENSMUSG00000040430.18 ENSMUST00000134763.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_107399092_C/A chr11:107399092 A ENSMUSG00000040430.18 ENSMUST00000103064.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108183588_TT/-/TTT chr11:108183588-108183589 - ENSMUSG00000050965.14 ENSMUST00000059595.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108183588_TT/-/TTT chr11:108183588-108183589 TTT ENSMUSG00000050965.14 ENSMUST00000059595.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108183588_TT/-/TTT chr11:108183588-108183589 - ENSMUSG00000084978.1 ENSMUST00000153899.1 Transcript non_coding_transcript_exon_variant 193-194 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108183588_TT/-/TTT chr11:108183588-108183589 TTT ENSMUSG00000084978.1 ENSMUST00000153899.1 Transcript non_coding_transcript_exon_variant 193-194 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000061287.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000129814.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000130515.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000133670.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000146912.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000150863.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000182729.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000182735.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_108650755_G/A chr11:108650755 A ENSMUSG00000020728.17 ENSMUST00000183042.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_109545538_GTGT/- chr11:109545538-109545541 - ENSMUSG00000020604.13 ENSMUST00000020928.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_109545538_GTGT/- chr11:109545538-109545541 - ENSMUSG00000020604.13 ENSMUST00000106696.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_109545538_GTGT/- chr11:109545538-109545541 - ENSMUSG00000020604.13 ENSMUST00000106697.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_110359095_C/T chr11:110359095 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_110448727_CACA/- chr11:110448727-110448730 - ENSMUSG00000020623.11 ENSMUST00000020949.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_110448727_CACA/- chr11:110448727-110448730 - ENSMUSG00000020623.11 ENSMUST00000100260.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_110448727_CACA/- chr11:110448727-110448730 - ENSMUSG00000020623.11 ENSMUST00000146084.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_110606570_T/C chr11:110606570 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_110859266_-/C chr11:110859265-110859266 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_111318014_ACAC/- chr11:111318014-111318017 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_111353085_GAGA/-/GA chr11:111353085-111353088 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_111353085_GAGA/-/GA chr11:111353085-111353088 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_111410451_ACAC/- chr11:111410451-111410454 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_111419853_A/C chr11:111419853 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_111661766_CTCT/-/CT chr11:111661766-111661769 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_111661766_CTCT/-/CT chr11:111661766-111661769 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_112288072_TCTC/- chr11:112288072-112288075 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_112385451_-/AG chr11:112385450-112385451 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_112598075_AC/- chr11:112598075-112598076 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 - ENSMUSG00000041654.15 ENSMUST00000042657.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 AT ENSMUSG00000041654.15 ENSMUST00000042657.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 ATATAT ENSMUSG00000041654.15 ENSMUST00000042657.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 - ENSMUSG00000041654.15 ENSMUST00000071539.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 AT ENSMUSG00000041654.15 ENSMUST00000071539.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 ATATAT ENSMUSG00000041654.15 ENSMUST00000071539.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 - ENSMUSG00000041654.15 ENSMUST00000106633.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 AT ENSMUSG00000041654.15 ENSMUST00000106633.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 ATATAT ENSMUSG00000041654.15 ENSMUST00000106633.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 - ENSMUSG00000041654.15 ENSMUST00000125890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 AT ENSMUSG00000041654.15 ENSMUST00000125890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 ATATAT ENSMUSG00000041654.15 ENSMUST00000125890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 - ENSMUSG00000041654.15 ENSMUST00000149034.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 AT ENSMUSG00000041654.15 ENSMUST00000149034.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113495160_ATAT/-/AT/ATATAT chr11:113495160-113495163 ATATAT ENSMUSG00000041654.15 ENSMUST00000149034.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113496936_TT/- chr11:113496936-113496937 - ENSMUSG00000041654.15 ENSMUST00000042657.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113496936_TT/- chr11:113496936-113496937 - ENSMUSG00000041654.15 ENSMUST00000071539.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113496936_TT/- chr11:113496936-113496937 - ENSMUSG00000041654.15 ENSMUST00000106633.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113496936_TT/- chr11:113496936-113496937 - ENSMUSG00000041654.15 ENSMUST00000125890.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113496936_TT/- chr11:113496936-113496937 - ENSMUSG00000041654.15 ENSMUST00000149034.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113809349_TTTT/- chr11:113809349-113809352 - ENSMUSG00000041592.16 ENSMUST00000041627.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113809349_TTTT/- chr11:113809349-113809352 - ENSMUSG00000041592.16 ENSMUST00000125879.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_113809349_TTTT/- chr11:113809349-113809352 - ENSMUSG00000041592.16 ENSMUST00000156955.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_114070633_-/CC chr11:114070632-114070633 CC ENSMUSG00000041592.16 ENSMUST00000041627.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4414;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_114070633_-/CC chr11:114070632-114070633 CC ENSMUSG00000041592.16 ENSMUST00000141943.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4657;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_114070633_-/CC chr11:114070632-114070633 CC ENSMUSG00000041592.16 ENSMUST00000144301.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3603;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_114070633_-/CC chr11:114070632-114070633 CC ENSMUSG00000041592.16 ENSMUST00000155651.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3586;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_114174390_TGTG/- chr11:114174390-114174393 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_114341267_CACA/-/CA chr11:114341267-114341270 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_114341267_CACA/-/CA chr11:114341267-114341270 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_114436359_TGTGTG/- chr11:114436359-114436364 - ENSMUSG00000062391.3 ENSMUST00000148405.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_114982646_GTGTGT/- chr11:114982646-114982651 - ENSMUSG00000034641.2 ENSMUST00000045075.2 Transcript 3_prime_UTR_variant 2268-2273 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115255929_ACAC/-/AC chr11:115255929-115255932 - ENSMUSG00000020734.13 ENSMUST00000003351.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115255929_ACAC/-/AC chr11:115255929-115255932 AC ENSMUSG00000020734.13 ENSMUST00000003351.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115255929_ACAC/-/AC chr11:115255929-115255932 - ENSMUSG00000020734.13 ENSMUST00000106554.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115255929_ACAC/-/AC chr11:115255929-115255932 AC ENSMUSG00000020734.13 ENSMUST00000106554.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115255929_ACAC/-/AC chr11:115255929-115255932 - ENSMUSG00000089544.1 ENSMUST00000158919.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2544;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115255929_ACAC/-/AC chr11:115255929-115255932 AC ENSMUSG00000089544.1 ENSMUST00000158919.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2544;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115313413_GTGT/-/GT chr11:115313413-115313416 - ENSMUSG00000050201.9 ENSMUST00000055490.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115313413_GTGT/-/GT chr11:115313413-115313416 GT ENSMUSG00000050201.9 ENSMUST00000055490.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115313413_GTGT/-/GT chr11:115313413-115313416 - ENSMUSG00000045288.10 ENSMUST00000103037.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1776;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115313413_GTGT/-/GT chr11:115313413-115313416 GT ENSMUSG00000045288.10 ENSMUST00000103037.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1776;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000092445.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=582;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000106532.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=578;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000125251.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=668;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000133636.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1904;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000139318.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1922;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000140567.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1919;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000140739.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000085651.1 ENSMUST00000144230.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=149;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000146500.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1928;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115461893_GTGT/- chr11:115461893-115461896 - ENSMUSG00000045775.15 ENSMUST00000153466.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=610;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_115638339_T/A chr11:115638339 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_115742292_A/T chr11:115742292 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_116027263_TCTT/- chr11:116027263-116027266 - ENSMUSG00000016559.14 ENSMUST00000016703.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2759;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116027263_TCTT/- chr11:116027263-116027266 - ENSMUSG00000020770.13 ENSMUST00000021116.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3056;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116027263_TCTT/- chr11:116027263-116027266 - ENSMUSG00000020770.13 ENSMUST00000106452.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3056;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116027263_TCTT/- chr11:116027263-116027266 - ENSMUSG00000016559.14 ENSMUST00000106454.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116027263_TCTT/- chr11:116027263-116027266 - ENSMUSG00000016559.14 ENSMUST00000139378.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2790;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116027263_TCTT/- chr11:116027263-116027266 - ENSMUSG00000016559.14 ENSMUST00000139623.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2749;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116027263_TCTT/- chr11:116027263-116027266 - ENSMUSG00000020770.13 ENSMUST00000176788.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3057;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020776.18 ENSMUST00000103031.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1556;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020776.18 ENSMUST00000106435.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1557;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020775.13 ENSMUST00000106439.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1860;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020776.18 ENSMUST00000125980.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2513;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020776.18 ENSMUST00000126861.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1556;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020775.13 ENSMUST00000133159.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1939;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020776.18 ENSMUST00000136318.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1556;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020775.13 ENSMUST00000138457.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1863;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_116140728_AC/TG chr11:116140728-116140729 TG ENSMUSG00000020775.13 ENSMUST00000142550.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1953;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_117045209_TCCT/- chr11:117045209-117045212 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_117106510_ACAC/-/AC chr11:117106510-117106513 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_117106510_ACAC/-/AC chr11:117106510-117106513 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_117395850_TGTG/-/TG chr11:117395850-117395853 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_117395850_TGTG/-/TG chr11:117395850-117395853 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_117441817_G/- chr11:117441817 - ENSMUSG00000085336.1 ENSMUST00000151381.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2951;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_117646135_GTGT/- chr11:117646135-117646138 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_118048447_TGTGTG/-/TGTG chr11:118048447-118048452 - ENSMUSG00000033987.16 ENSMUST00000084803.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118048447_TGTGTG/-/TGTG chr11:118048447-118048452 TGTG ENSMUSG00000033987.16 ENSMUST00000084803.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118048447_TGTGTG/-/TGTG chr11:118048447-118048452 - ENSMUSG00000033987.16 ENSMUST00000106308.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118048447_TGTGTG/-/TGTG chr11:118048447-118048452 TGTG ENSMUSG00000033987.16 ENSMUST00000106308.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118048447_TGTGTG/-/TGTG chr11:118048447-118048452 - ENSMUSG00000033987.16 ENSMUST00000132685.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118048447_TGTGTG/-/TGTG chr11:118048447-118048452 TGTG ENSMUSG00000033987.16 ENSMUST00000132685.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118344292_AGAGAG/-/AGAG chr11:118344292-118344297 - ENSMUSG00000017466.9 ENSMUST00000017610.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118344292_AGAGAG/-/AGAG chr11:118344292-118344297 AGAG ENSMUSG00000017466.9 ENSMUST00000017610.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118344292_AGAGAG/-/AGAG chr11:118344292-118344297 - ENSMUSG00000076433.4 ENSMUST00000103024.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1792;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118344292_AGAGAG/-/AGAG chr11:118344292-118344297 AGAG ENSMUSG00000076433.4 ENSMUST00000103024.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1792;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118344292_AGAGAG/-/AGAG chr11:118344292-118344297 - ENSMUSG00000017466.9 ENSMUST00000155707.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_118344292_AGAGAG/-/AGAG chr11:118344292-118344297 AGAG ENSMUSG00000017466.9 ENSMUST00000155707.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119060866_G/C chr11:119060866 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_119236378_A/C chr11:119236378 C ENSMUSG00000039963.18 ENSMUST00000035935.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119236378_A/C chr11:119236378 C ENSMUSG00000039963.18 ENSMUST00000053440.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119236378_A/C chr11:119236378 C ENSMUSG00000039963.18 ENSMUST00000143066.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2340;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119236378_A/C chr11:119236378 C ENSMUSG00000039963.18 ENSMUST00000147037.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4734;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119236378_A/C chr11:119236378 C ENSMUSG00000039963.18 ENSMUST00000150358.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4650;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119330931_A/C chr11:119330931 C ENSMUSG00000013483.14 ENSMUST00000053245.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119330931_A/C chr11:119330931 C ENSMUSG00000013483.14 ENSMUST00000106250.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119330931_A/C chr11:119330931 C ENSMUSG00000013483.14 ENSMUST00000147167.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119330931_A/C chr11:119330931 C ENSMUSG00000013483.14 ENSMUST00000151052.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119385455_AA/-/AAA chr11:119385455-119385456 - ENSMUSG00000039908.14 ENSMUST00000050880.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4376;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119385455_AA/-/AAA chr11:119385455-119385456 AAA ENSMUSG00000039908.14 ENSMUST00000050880.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4376;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119385455_AA/-/AAA chr11:119385455-119385456 - ENSMUSG00000039908.14 ENSMUST00000151612.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4406;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_119385455_AA/-/AAA chr11:119385455-119385456 AAA ENSMUSG00000039908.14 ENSMUST00000151612.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4406;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_120915563_T/A chr11:120915563 A ENSMUSG00000048445.6 ENSMUST00000056781.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121022532_TGGGA/- chr11:121022532-121022536 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr11_121298240_T/C chr11:121298240 C ENSMUSG00000039275.9 ENSMUST00000106113.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121298240_T/C chr11:121298240 C ENSMUSG00000039275.9 ENSMUST00000151492.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=276;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121298240_T/C chr11:121298240 C ENSMUSG00000039275.9 ENSMUST00000153579.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1151;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121360182_T/C chr11:121360182 C ENSMUSG00000025170.13 ENSMUST00000106107.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121360182_T/C chr11:121360182 C ENSMUSG00000025170.13 ENSMUST00000124639.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121360182_T/C chr11:121360182 C ENSMUSG00000025170.13 ENSMUST00000135290.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121360182_T/C chr11:121360182 C ENSMUSG00000025170.13 ENSMUST00000149948.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121538418_AA/- chr11:121538418-121538419 - ENSMUSG00000039230.14 ENSMUST00000103013.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr11_121538418_AA/- chr11:121538418-121538419 - ENSMUSG00000039230.14 ENSMUST00000125167.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3326784_CTCT/- chr12:3326784-3326787 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_3357406_GTGTGTGTGTGTGTGTGTGTGGTGCGCGCGCGCGCGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGCGCGCGTGTGTGTGTGTGTGTGGTGCGCGTGCGCGTGTGTGTGTGTGTGTGTGTGGTGCGCGCGCGCGCGCGCGTGTGTGT/- chr12:3357406-3357594 - ENSMUSG00000097429.1 ENSMUST00000180719.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=253;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000077930.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000101637.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000164578.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000164607.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000168806.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000173199.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000173240.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000173483.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000173524.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000173736.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000173998.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000174109.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000174290.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000174479.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000174547.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000174639.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3588587_G/- chr12:3588587 - ENSMUSG00000071454.13 ENSMUST00000174663.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_3792288_TT/-/TTT chr12:3792288-3792289 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_3792288_TT/-/TTT chr12:3792288-3792289 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_3948534_CTCT/- chr12:3948534-3948537 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_4219371_T/C chr12:4219371 C ENSMUSG00000020652.17 ENSMUST00000020981.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219371_T/C chr12:4219371 C ENSMUSG00000020652.17 ENSMUST00000111169.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219371_T/C chr12:4219371 C ENSMUSG00000020652.17 ENSMUST00000126017.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219371_T/C chr12:4219371 C ENSMUSG00000020652.17 ENSMUST00000128466.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219371_T/C chr12:4219371 C ENSMUSG00000020652.17 ENSMUST00000140975.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219371_T/C chr12:4219371 C ENSMUSG00000020652.17 ENSMUST00000146261.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2825;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219371_T/C chr12:4219371 C ENSMUSG00000020652.17 ENSMUST00000146523.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2865;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219371_T/C chr12:4219371 C ENSMUSG00000112770.1 ENSMUST00000220315.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2731;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000020652.17 ENSMUST00000020981.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000020652.17 ENSMUST00000111169.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000020652.17 ENSMUST00000126017.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000020652.17 ENSMUST00000128466.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000020652.17 ENSMUST00000140975.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000020652.17 ENSMUST00000146261.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2840;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000020652.17 ENSMUST00000146523.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2880;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4219386_A/G chr12:4219386 G ENSMUSG00000112770.1 ENSMUST00000220315.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2716;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4671849_ACACAC/- chr12:4671849-4671854 - ENSMUSG00000020640.10 ENSMUST00000062580.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4671849_ACACAC/- chr12:4671849-4671854 - ENSMUSG00000020640.10 ENSMUST00000217672.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4671849_ACACAC/- chr12:4671849-4671854 - ENSMUSG00000020640.10 ENSMUST00000218985.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4671849_ACACAC/- chr12:4671849-4671854 - ENSMUSG00000020640.10 ENSMUST00000219007.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4671849_ACACAC/- chr12:4671849-4671854 - ENSMUSG00000020640.10 ENSMUST00000219832.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4671849_ACACAC/- chr12:4671849-4671854 - ENSMUSG00000020640.10 ENSMUST00000220311.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000020634.12 ENSMUST00000020962.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2382;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000020634.12 ENSMUST00000020962.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2382;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000037336.14 ENSMUST00000045921.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2290;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000037336.14 ENSMUST00000045921.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2290;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000037336.14 ENSMUST00000085790.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2290;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000037336.14 ENSMUST00000085790.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2290;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000037336.14 ENSMUST00000125344.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000037336.14 ENSMUST00000125344.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000037336.14 ENSMUST00000137337.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2290;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000037336.14 ENSMUST00000137337.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2290;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000020634.12 ENSMUST00000141360.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3740;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000020634.12 ENSMUST00000141360.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3740;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000020634.12 ENSMUST00000142867.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2699;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000020634.12 ENSMUST00000142867.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2699;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000037336.14 ENSMUST00000143446.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2289;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000037336.14 ENSMUST00000143446.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2289;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000037336.14 ENSMUST00000147241.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2289;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000037336.14 ENSMUST00000147241.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2289;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 - ENSMUSG00000037336.14 ENSMUST00000150764.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_4876648_TTT/-/TT chr12:4876648-4876650 TT ENSMUSG00000037336.14 ENSMUST00000150764.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_5058949_A/G chr12:5058949 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_5807101_A/T chr12:5807101 T ENSMUSG00000112404.1 ENSMUST00000219369.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1094;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_5807101_A/T chr12:5807101 T ENSMUSG00000112404.1 ENSMUST00000219472.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1133;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_5807101_A/T chr12:5807101 T ENSMUSG00000112404.1 ENSMUST00000219593.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1109;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_5807101_A/T chr12:5807101 T ENSMUSG00000112404.1 ENSMUST00000220232.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1116;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_6356038_TT/- chr12:6356038-6356039 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_7068935_AAA/- chr12:7068935-7068937 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_7111671_C/A chr12:7111671 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_7172795_ACAC/- chr12:7172795-7172798 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_8113775_ACACAC/- chr12:8113775-8113780 - ENSMUSG00000112694.1 ENSMUST00000217927.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_8996042_T/- chr12:8996042 - ENSMUSG00000066643.12 ENSMUST00000085745.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_8996042_T/- chr12:8996042 - ENSMUSG00000066643.12 ENSMUST00000111113.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_8996042_T/- chr12:8996042 - ENSMUSG00000066643.12 ENSMUST00000159126.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4370;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_8996042_T/- chr12:8996042 - ENSMUSG00000066643.12 ENSMUST00000160329.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4365;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_8996042_T/- chr12:8996042 - ENSMUSG00000066643.12 ENSMUST00000161019.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_9103769_ACAC/- chr12:9103769-9103772 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_9248148_ACAC/- chr12:9248148-9248151 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_9367383_AA/-/A chr12:9367383-9367384 - ENSMUSG00000113913.1 ENSMUST00000223136.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_9367383_AA/-/A chr12:9367383-9367384 A ENSMUSG00000113913.1 ENSMUST00000223136.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_9655282_T/G chr12:9655282 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_9655292_T/G chr12:9655292 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_10120286_GTGT/- chr12:10120286-10120289 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_10656939_G/A chr12:10656939 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_10840542_GAAA/- chr12:10840542-10840545 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_11581876_GAGA/- chr12:11581876-11581879 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_12301074_TGTG/-/TG chr12:12301074-12301077 - ENSMUSG00000020589.17 ENSMUST00000069005.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 TG ENSMUSG00000020589.17 ENSMUST00000069005.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 - ENSMUSG00000020589.17 ENSMUST00000069066.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 TG ENSMUSG00000020589.17 ENSMUST00000069066.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 - ENSMUSG00000020589.17 ENSMUST00000221782.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 TG ENSMUSG00000020589.17 ENSMUST00000221782.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 - ENSMUSG00000020589.17 ENSMUST00000222357.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 TG ENSMUSG00000020589.17 ENSMUST00000222357.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 - ENSMUSG00000020589.17 ENSMUST00000223061.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12301074_TGTG/-/TG chr12:12301074-12301077 TG ENSMUSG00000020589.17 ENSMUST00000223061.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12332639_A/C chr12:12332639 C ENSMUSG00000020589.17 ENSMUST00000069005.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12332639_A/C chr12:12332639 C ENSMUSG00000020589.17 ENSMUST00000069066.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12332639_A/C chr12:12332639 C ENSMUSG00000020589.17 ENSMUST00000221782.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12332639_A/C chr12:12332639 C ENSMUSG00000020589.17 ENSMUST00000222357.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12332639_A/C chr12:12332639 C ENSMUSG00000020589.17 ENSMUST00000223061.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_12530711_CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC/-/CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC chr12:12530711-12530742 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_12530711_CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC/-/CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC chr12:12530711-12530742 CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_12928604_T/G chr12:12928604 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_13685551_ACAC/- chr12:13685551-13685554 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_14479628_TGTG/-/TG chr12:14479628-14479631 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_14479628_TGTG/-/TG chr12:14479628-14479631 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_14970028_AGAG/-/AG chr12:14970028-14970031 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_14970028_AGAG/-/AG chr12:14970028-14970031 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_15191539_T/C chr12:15191539 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_16147417_TGTG/- chr12:16147417-16147420 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_16690398_TGTG/- chr12:16690398-16690401 - ENSMUSG00000036523.16 ENSMUST00000048064.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_16690398_TGTG/- chr12:16690398-16690401 - ENSMUSG00000036523.16 ENSMUST00000159120.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_16690398_TGTG/- chr12:16690398-16690401 - ENSMUSG00000036523.16 ENSMUST00000160755.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_16690398_TGTG/- chr12:16690398-16690401 - ENSMUSG00000036523.16 ENSMUST00000161036.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=130;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_16690398_TGTG/- chr12:16690398-16690401 - ENSMUSG00000036523.16 ENSMUST00000162112.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17076122_-/TTTTTT chr12:17076121-17076122 TTTTTT ENSMUSG00000113447.1 ENSMUST00000221508.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1571;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000020884.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000095820.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000127185.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000140751.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000143131.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000153090.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000221129.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_17316903_G/A chr12:17316903 A ENSMUSG00000020566.19 ENSMUST00000222103.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_18162789_C/T chr12:18162789 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_18179000_C/T chr12:18179000 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_18471004_G/T chr12:18471004 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_19831976_AC/- chr12:19831976-19831977 - ENSMUSG00000113332.1 ENSMUST00000223533.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1604;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_20064145_G/A chr12:20064145 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_20144582_A/T chr12:20144582 T ENSMUSG00000113039.1 ENSMUST00000222981.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_20737110_CACA/-/CA chr12:20737110-20737113 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_20737110_CACA/-/CA chr12:20737110-20737113 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_21033589_TGTG/- chr12:21033589-21033592 - ENSMUSG00000052632.16 ENSMUST00000174530.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21033589_TGTG/- chr12:21033589-21033592 - ENSMUSG00000116627.1 ENSMUST00000232257.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21194633_GTGT/- chr12:21194633-21194636 - ENSMUSG00000052632.16 ENSMUST00000050990.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21194633_GTGT/- chr12:21194633-21194636 - ENSMUSG00000052632.16 ENSMUST00000064595.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21194633_GTGT/- chr12:21194633-21194636 - ENSMUSG00000052632.16 ENSMUST00000090834.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21194633_GTGT/- chr12:21194633-21194636 - ENSMUSG00000052632.16 ENSMUST00000101562.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21194633_GTGT/- chr12:21194633-21194636 - ENSMUSG00000052632.16 ENSMUST00000174530.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21235165_T/- chr12:21235165 - ENSMUSG00000052632.16 ENSMUST00000050990.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21235165_T/- chr12:21235165 - ENSMUSG00000052632.16 ENSMUST00000064595.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21235165_T/- chr12:21235165 - ENSMUSG00000052632.16 ENSMUST00000090834.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21235165_T/- chr12:21235165 - ENSMUSG00000052632.16 ENSMUST00000101562.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21366972_AAGG/- chr12:21366972-21366975 - ENSMUSG00000052593.16 ENSMUST00000064536.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21366972_AAGG/- chr12:21366972-21366975 - ENSMUSG00000052593.16 ENSMUST00000101551.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21366972_AAGG/- chr12:21366972-21366975 - ENSMUSG00000052593.16 ENSMUST00000127974.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21366972_AAGG/- chr12:21366972-21366975 - ENSMUSG00000052593.16 ENSMUST00000142092.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21366972_AAGG/- chr12:21366972-21366975 - ENSMUSG00000052593.16 ENSMUST00000145118.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21366972_AAGG/- chr12:21366972-21366975 - ENSMUSG00000052593.16 ENSMUST00000232107.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21366972_AAGG/- chr12:21366972-21366975 - ENSMUSG00000052593.16 ENSMUST00000232526.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_21435768_CACACA/-/CACA chr12:21435768-21435773 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_21435768_CACACA/-/CACA chr12:21435768-21435773 CACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_22124368_ATAT/- chr12:22124368-22124371 - ENSMUSG00000093846.1 ENSMUST00000172838.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_22198563_TCTC/- chr12:22198563-22198566 - ENSMUSG00000113638.1 ENSMUST00000221269.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4539;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_22889641_C/A chr12:22889641 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_23159589_C/T chr12:23159589 T ENSMUSG00000113085.1 ENSMUST00000220778.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3525;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_23161658_A/G chr12:23161658 G ENSMUSG00000113579.1 ENSMUST00000220883.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4677;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_23477685_T/A chr12:23477685 A ENSMUSG00000096618.2 ENSMUST00000173586.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_23477689_GT/AG chr12:23477689-23477690 AG ENSMUSG00000096618.2 ENSMUST00000173586.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1704;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_23672063_AA/- chr12:23672063-23672064 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_24812677_AA/-/A chr12:24812677-24812678 - ENSMUSG00000113621.1 ENSMUST00000223485.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_24812677_AA/-/A chr12:24812677-24812678 A ENSMUSG00000113621.1 ENSMUST00000223485.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_25437942_ACACACACACACACACACACACACTTAAGACACACAGGTATACCTTCATATATACACATGTGAATACGAACACTCGGACAGACAGTCAGAAAGAAACACAAACACAAACACAT/- chr12:25437942-25438054 - ENSMUSG00000113669.1 ENSMUST00000221270.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_26031711_CTCTCCCTCTCCCTCTCC/- chr12:26031711-26031728 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_26048316_A/G chr12:26048316 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_26100848_ATATAG/- chr12:26100848-26100853 - ENSMUSG00000113550.1 ENSMUST00000223022.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_26441038_GTGT/- chr12:26441038-26441041 - ENSMUSG00000020641.16 ENSMUST00000020970.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1705;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_26441038_GTGT/- chr12:26441038-26441041 - ENSMUSG00000020641.16 ENSMUST00000137792.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1712;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_26441038_GTGT/- chr12:26441038-26441041 - ENSMUSG00000113033.1 ENSMUST00000220508.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4219;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_26777816_AC/- chr12:26777816-26777817 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_27179446_CACA/-/CA chr12:27179446-27179449 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_27179446_CACA/-/CA chr12:27179446-27179449 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_27962492_GTGT/- chr12:27962492-27962495 - ENSMUSG00000113616.1 ENSMUST00000221907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28491769_C/T chr12:28491769 T ENSMUSG00000020633.14 ENSMUST00000185916.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28491769_C/T chr12:28491769 T ENSMUSG00000020633.14 ENSMUST00000189735.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28491769_C/T chr12:28491769 T ENSMUSG00000020633.14 ENSMUST00000221349.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28861066_T/A chr12:28861066 A ENSMUSG00000036613.8 ENSMUST00000035657.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28861066_T/A chr12:28861066 A ENSMUSG00000036613.8 ENSMUST00000220878.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1783;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28861066_T/A chr12:28861066 A ENSMUSG00000036613.8 ENSMUST00000220933.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2268;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28861066_T/A chr12:28861066 A ENSMUSG00000036613.8 ENSMUST00000221555.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28861066_T/A chr12:28861066 A ENSMUSG00000036613.8 ENSMUST00000221574.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_28861066_T/A chr12:28861066 A ENSMUSG00000036613.8 ENSMUST00000221877.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_29910485_-/TT chr12:29910484-29910485 TT ENSMUSG00000061911.15 ENSMUST00000021009.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_29910485_-/TT chr12:29910484-29910485 TT ENSMUSG00000061911.15 ENSMUST00000049784.16 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_29910485_-/TT chr12:29910484-29910485 TT ENSMUSG00000061911.15 ENSMUST00000218583.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_29910485_-/TT chr12:29910484-29910485 TT ENSMUSG00000061911.15 ENSMUST00000219744.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_31386661_C/A chr12:31386661 A ENSMUSG00000001225.12 ENSMUST00000167432.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4210;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_31702384_ACACAC/- chr12:31702384-31702389 - ENSMUSG00000035933.5 ENSMUST00000036862.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_31702384_ACACAC/- chr12:31702384-31702389 - ENSMUSG00000044067.6 ENSMUST00000057783.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4478;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32186131_CC/- chr12:32186131-32186132 - ENSMUSG00000020573.17 ENSMUST00000053215.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32186131_CC/- chr12:32186131-32186132 - ENSMUSG00000020573.17 ENSMUST00000085469.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32186131_CC/- chr12:32186131-32186132 - ENSMUSG00000020573.17 ENSMUST00000156904.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32186131_CC/- chr12:32186131-32186132 - ENSMUSG00000020573.17 ENSMUST00000217915.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32186131_CC/- chr12:32186131-32186132 - ENSMUSG00000020573.17 ENSMUST00000220366.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32208987_GTGT/- chr12:32208987-32208990 - ENSMUSG00000020573.17 ENSMUST00000053215.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=328;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32208987_GTGT/- chr12:32208987-32208990 - ENSMUSG00000020573.17 ENSMUST00000085469.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=517;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32208987_GTGT/- chr12:32208987-32208990 - ENSMUSG00000020573.17 ENSMUST00000156904.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=376;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32208987_GTGT/- chr12:32208987-32208990 - ENSMUSG00000020573.17 ENSMUST00000217915.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3001;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32208987_GTGT/- chr12:32208987-32208990 - ENSMUSG00000020573.17 ENSMUST00000220366.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=649;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32322746_AGAGAG/-/AGAG chr12:32322746-32322751 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_32322746_AGAGAG/-/AGAG chr12:32322746-32322751 AGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_32451126_CTCT/-/CT chr12:32451126-32451129 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_32451126_CTCT/-/CT chr12:32451126-32451129 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_32884745_AA/-/A chr12:32884745-32884746 - ENSMUSG00000112166.1 ENSMUST00000219636.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4334;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_32884745_AA/-/A chr12:32884745-32884746 A ENSMUSG00000112166.1 ENSMUST00000219636.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4334;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_33400643_CACA/-/CA/CACACA chr12:33400643-33400646 - ENSMUSG00000020562.7 ENSMUST00000020878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_33400643_CACA/-/CA/CACACA chr12:33400643-33400646 CA ENSMUSG00000020562.7 ENSMUST00000020878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_33400643_CACA/-/CA/CACACA chr12:33400643-33400646 CACACA ENSMUSG00000020562.7 ENSMUST00000020878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_33400643_CACA/-/CA/CACACA chr12:33400643-33400646 - ENSMUSG00000112094.1 ENSMUST00000219139.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_33400643_CACA/-/CA/CACACA chr12:33400643-33400646 CA ENSMUSG00000112094.1 ENSMUST00000219139.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_33400643_CACA/-/CA/CACACA chr12:33400643-33400646 CACACA ENSMUSG00000112094.1 ENSMUST00000219139.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=719;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_33551412_G/A chr12:33551412 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_33551420_G/C chr12:33551420 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_33750620_A/G chr12:33750620 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_34356178_CACA/-/CA chr12:34356178-34356181 - ENSMUSG00000004698.10 ENSMUST00000209750.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 CA ENSMUSG00000004698.10 ENSMUST00000209750.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 - ENSMUSG00000004698.10 ENSMUST00000209902.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 CA ENSMUSG00000004698.10 ENSMUST00000209902.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 - ENSMUSG00000004698.10 ENSMUST00000209990.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 CA ENSMUSG00000004698.10 ENSMUST00000209990.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 - ENSMUSG00000004698.10 ENSMUST00000210724.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 CA ENSMUSG00000004698.10 ENSMUST00000210724.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 - ENSMUSG00000004698.10 ENSMUST00000211752.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34356178_CACA/-/CA chr12:34356178-34356181 CA ENSMUSG00000004698.10 ENSMUST00000211752.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34761856_C/G chr12:34761856 G ENSMUSG00000004698.10 ENSMUST00000211632.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34761856_C/G chr12:34761856 G ENSMUSG00000004698.10 ENSMUST00000211752.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34858986_AA/-/AAA chr12:34858986-34858987 - ENSMUSG00000004698.10 ENSMUST00000211632.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34858986_AA/-/AAA chr12:34858986-34858987 AAA ENSMUSG00000004698.10 ENSMUST00000211632.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34858986_AA/-/AAA chr12:34858986-34858987 - ENSMUSG00000004698.10 ENSMUST00000211752.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_34858986_AA/-/AAA chr12:34858986-34858987 AAA ENSMUSG00000004698.10 ENSMUST00000211752.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_35644962_A/G chr12:35644962 G ENSMUSG00000113548.1 ENSMUST00000223547.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_36298533_TG/- chr12:36298533-36298534 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_36298536_T/C chr12:36298536 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_37181320_-/TAGA chr12:37181319-37181320 TAGA ENSMUSG00000036144.6 ENSMUST00000041183.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1785;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 - ENSMUSG00000050103.18 ENSMUST00000049874.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 AG ENSMUSG00000050103.18 ENSMUST00000049874.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 - ENSMUSG00000050103.18 ENSMUST00000159998.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 AG ENSMUSG00000050103.18 ENSMUST00000159998.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 - ENSMUSG00000050103.18 ENSMUST00000160158.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 AG ENSMUSG00000050103.18 ENSMUST00000160158.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 - ENSMUSG00000050103.18 ENSMUST00000160390.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_37350922_AGAG/-/AG chr12:37350922-37350925 AG ENSMUSG00000050103.18 ENSMUST00000160390.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38677094_C/A chr12:38677094 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000095767.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000159334.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000160244.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000160701.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000160856.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000161591.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000161980.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000162563.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_38854044_TGTG/- chr12:38854044-38854047 - ENSMUSG00000004151.17 ENSMUST00000162730.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_39010077_TT/-/TTT chr12:39010077-39010078 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_39010077_TT/-/TTT chr12:39010077-39010078 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_39632921_ATAT/- chr12:39632921-39632924 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_39689065_ACACAC/- chr12:39689065-39689070 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_39938521_GTGT/- chr12:39938521-39938524 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_40170313_TTC/- chr12:40170313-40170315 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_40769242_-/GTGTGTGTGTGTGTGT chr12:40769241-40769242 GTGTGTGTGTGTGTGT ENSMUSG00000035954.10 ENSMUST00000037488.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_40769242_-/GTGTGTGTGTGTGTGT chr12:40769241-40769242 GTGTGTGTGTGTGTGT ENSMUSG00000035954.10 ENSMUST00000220912.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_40769242_-/GTGTGTGTGTGTGTGT chr12:40769241-40769242 GTGTGTGTGTGTGTGT ENSMUSG00000035954.10 ENSMUST00000222287.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41607162_TG/- chr12:41607162-41607163 - ENSMUSG00000056899.10 ENSMUST00000132121.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41607162_TG/- chr12:41607162-41607163 - ENSMUSG00000056899.10 ENSMUST00000134965.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41607165_T/A chr12:41607165 A ENSMUSG00000056899.10 ENSMUST00000132121.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41607165_T/A chr12:41607165 A ENSMUSG00000056899.10 ENSMUST00000134965.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41623497_AA/- chr12:41623497-41623498 - ENSMUSG00000056899.10 ENSMUST00000132121.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41623497_AA/- chr12:41623497-41623498 - ENSMUSG00000056899.10 ENSMUST00000134965.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41751343_ATAT/-/ATATAT chr12:41751343-41751346 - ENSMUSG00000056899.10 ENSMUST00000132121.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41751343_ATAT/-/ATATAT chr12:41751343-41751346 ATATAT ENSMUSG00000056899.10 ENSMUST00000132121.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41751343_ATAT/-/ATATAT chr12:41751343-41751346 - ENSMUSG00000056899.10 ENSMUST00000134965.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_41751343_ATAT/-/ATATAT chr12:41751343-41751346 ATATAT ENSMUSG00000056899.10 ENSMUST00000134965.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_42666841_C/T chr12:42666841 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_43175334_T/A chr12:43175334 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_43948097_ACAC/-/AC/ACACAC chr12:43948097-43948100 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_43948097_ACAC/-/AC/ACACAC chr12:43948097-43948100 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_43948097_ACAC/-/AC/ACACAC chr12:43948097-43948100 ACACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_44683919_-/CTTTCTTC chr12:44683918-44683919 CTTTCTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_45185821_GAGA/- chr12:45185821-45185824 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_45389674_TTTTT/- chr12:45389674-45389678 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_45997825_AAA/- chr12:45997825-45997827 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_46020100_TGTGTG/- chr12:46020100-46020105 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_46200707_-/A chr12:46200706-46200707 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_46344696_G/A chr12:46344696 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_46518882_-/AAAG chr12:46518881-46518882 AAAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_46913475_ACTGACT/- chr12:46913475-46913481 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_47288746_ACAC/-/AC chr12:47288746-47288749 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_47288746_ACAC/-/AC chr12:47288746-47288749 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_47598570_TATATA/- chr12:47598570-47598575 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_47807018_G/A chr12:47807018 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_49479179_C/T chr12:49479179 T ENSMUSG00000100844.1 ENSMUST00000187665.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_49649349_ACAC/- chr12:49649349-49649352 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_50214999_T/A chr12:50214999 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_51622858_ACAC/-/AC chr12:51622858-51622861 - ENSMUSG00000020954.16 ENSMUST00000013130.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_51622858_ACAC/-/AC chr12:51622858-51622861 AC ENSMUSG00000020954.16 ENSMUST00000013130.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_51622858_ACAC/-/AC chr12:51622858-51622861 - ENSMUSG00000020954.16 ENSMUST00000169503.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_51622858_ACAC/-/AC chr12:51622858-51622861 AC ENSMUSG00000020954.16 ENSMUST00000169503.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_51736852_TT/- chr12:51736852-51736853 - ENSMUSG00000020955.9 ENSMUST00000021338.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_51736852_TT/- chr12:51736852-51736853 - ENSMUSG00000089346.1 ENSMUST00000158721.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3388;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_51736852_TT/- chr12:51736852-51736853 - ENSMUSG00000020955.9 ENSMUST00000218820.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52098327_TT/-/TTT chr12:52098327-52098328 - ENSMUSG00000035142.18 ENSMUST00000040090.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52098327_TT/-/TTT chr12:52098327-52098328 TTT ENSMUSG00000035142.18 ENSMUST00000040090.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52098327_TT/-/TTT chr12:52098327-52098328 - ENSMUSG00000035142.18 ENSMUST00000159485.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52098327_TT/-/TTT chr12:52098327-52098328 TTT ENSMUSG00000035142.18 ENSMUST00000159485.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52098327_TT/-/TTT chr12:52098327-52098328 - ENSMUSG00000035142.18 ENSMUST00000159708.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52098327_TT/-/TTT chr12:52098327-52098328 TTT ENSMUSG00000035142.18 ENSMUST00000159708.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52436724_A/-/AA chr12:52436724 - ENSMUSG00000112139.1 ENSMUST00000218097.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52436724_A/-/AA chr12:52436724 AA ENSMUSG00000112139.1 ENSMUST00000218097.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52800855_ACAC/-/AC chr12:52800855-52800858 - ENSMUSG00000061603.8 ENSMUST00000095737.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52800855_ACAC/-/AC chr12:52800855-52800858 AC ENSMUSG00000061603.8 ENSMUST00000095737.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52800855_ACAC/-/AC chr12:52800855-52800858 - ENSMUSG00000061603.8 ENSMUST00000219786.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52800855_ACAC/-/AC chr12:52800855-52800858 AC ENSMUSG00000061603.8 ENSMUST00000219786.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52992486_ACACTCACACACACACTCACACACACTCACACACACACATACACAAAGACATACACACACTCACACACACACACATACACAGACACACACACACACTCATACACACACACACACTCACAT/- chr12:52992486-52992605 - ENSMUSG00000061603.8 ENSMUST00000095737.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_52992486_ACACTCACACACACACTCACACACACTCACACACACACATACACAAAGACATACACACACTCACACACACACACATACACAGACACACACACACACTCATACACACACACACACTCACAT/- chr12:52992486-52992605 - ENSMUSG00000061603.8 ENSMUST00000219786.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54056869_AA/- chr12:54056869-54056870 - ENSMUSG00000021010.8 ENSMUST00000101432.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54056869_AA/- chr12:54056869-54056870 - ENSMUSG00000021010.8 ENSMUST00000223057.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54056869_AA/- chr12:54056869-54056870 - ENSMUSG00000021010.8 ENSMUST00000223358.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54120765_TCTCTCTC/-/TCTCTC chr12:54120765-54120772 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_54120765_TCTCTCTC/-/TCTCTC chr12:54120765-54120772 TCTCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_54215254_-/TCT chr12:54215253-54215254 TCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_54771520_-/AA chr12:54771519-54771520 AA ENSMUSG00000005656.9 ENSMUST00000005798.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54771520_-/AA chr12:54771519-54771520 AA ENSMUSG00000005656.9 ENSMUST00000218066.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54771520_-/AA chr12:54771519-54771520 AA ENSMUSG00000005656.9 ENSMUST00000218337.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=537;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54771520_-/AA chr12:54771519-54771520 AA ENSMUSG00000005656.9 ENSMUST00000218934.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54771520_-/AA chr12:54771519-54771520 AA ENSMUSG00000005656.9 ENSMUST00000219781.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54868674_G/A chr12:54868674 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_54892969_TTTT/- chr12:54892969-54892972 - ENSMUSG00000035021.13 ENSMUST00000038926.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=17;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54892969_TTTT/- chr12:54892969-54892972 - ENSMUSG00000035021.13 ENSMUST00000173433.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=579;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_54892969_TTTT/- chr12:54892969-54892972 - ENSMUSG00000035021.13 ENSMUST00000173453.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1201;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55292299_AA/-/AAA chr12:55292299-55292300 - ENSMUSG00000021022.9 ENSMUST00000021410.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55292299_AA/-/AAA chr12:55292299-55292300 AAA ENSMUSG00000021022.9 ENSMUST00000021410.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55292299_AA/-/AAA chr12:55292299-55292300 - ENSMUSG00000021022.9 ENSMUST00000218116.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4432;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55292299_AA/-/AAA chr12:55292299-55292300 AAA ENSMUSG00000021022.9 ENSMUST00000218116.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4432;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55292299_AA/-/AAA chr12:55292299-55292300 - ENSMUSG00000021022.9 ENSMUST00000219809.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=229;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55292299_AA/-/AAA chr12:55292299-55292300 AAA ENSMUSG00000021022.9 ENSMUST00000219809.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=229;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55783320_AAAAA/- chr12:55783320-55783324 - ENSMUSG00000021027.17 ENSMUST00000085385.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55783320_AAAAA/- chr12:55783320-55783324 - ENSMUSG00000021027.17 ENSMUST00000110687.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55783320_AAAAA/- chr12:55783320-55783324 - ENSMUSG00000021027.17 ENSMUST00000219432.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55783320_AAAAA/- chr12:55783320-55783324 - ENSMUSG00000021027.17 ENSMUST00000219529.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55783320_AAAAA/- chr12:55783320-55783324 - ENSMUSG00000021027.17 ENSMUST00000219542.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55783320_AAAAA/- chr12:55783320-55783324 - ENSMUSG00000021027.17 ENSMUST00000220367.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_55783320_AAAAA/- chr12:55783320-55783324 - ENSMUSG00000021027.17 ENSMUST00000226244.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56200826_-/TG chr12:56200825-56200826 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_56708868_T/A chr12:56708868 A ENSMUSG00000001497.18 ENSMUST00000001538.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56708868_T/A chr12:56708868 A ENSMUSG00000035472.14 ENSMUST00000044634.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3766;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56708868_T/A chr12:56708868 A ENSMUSG00000035472.14 ENSMUST00000110680.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4945;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56708868_T/A chr12:56708868 A ENSMUSG00000001497.18 ENSMUST00000152848.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56708868_T/A chr12:56708868 A ENSMUSG00000001497.18 ENSMUST00000153250.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56708868_T/A chr12:56708868 A ENSMUSG00000035472.14 ENSMUST00000217690.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4544;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56807850_-/TTTTTTTTTTTTTTTT chr12:56807849-56807850 TTTTTTTTTTTTTTTT ENSMUSG00000035472.14 ENSMUST00000044634.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56807850_-/TTTTTTTTTTTTTTTT chr12:56807849-56807850 TTTTTTTTTTTTTTTT ENSMUSG00000035472.14 ENSMUST00000110680.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56807850_-/TTTTTTTTTTTTTTTT chr12:56807849-56807850 TTTTTTTTTTTTTTTT ENSMUSG00000035472.14 ENSMUST00000160892.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_56807850_-/TTTTTTTTTTTTTTTT chr12:56807849-56807850 TTTTTTTTTTTTTTTT ENSMUSG00000035472.14 ENSMUST00000217690.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_57547831_-/GTGT chr12:57547830-57547831 GTGT ENSMUSG00000035451.7 ENSMUST00000044380.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_57547831_-/GTGT chr12:57547830-57547831 GTGT ENSMUSG00000035451.7 ENSMUST00000218398.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=914;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_57564887_TT/-/T chr12:57564887-57564888 - ENSMUSG00000046782.14 ENSMUST00000101398.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_57564887_TT/-/T chr12:57564887-57564888 T ENSMUSG00000046782.14 ENSMUST00000101398.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_57565558_TT/- chr12:57565558-57565559 - ENSMUSG00000046782.14 ENSMUST00000101398.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_57916967_A/G chr12:57916967 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_58272353_ACAC/- chr12:58272353-58272356 - ENSMUSG00000045930.3 ENSMUST00000062254.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3063;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_58407941_AGAG/- chr12:58407941-58407944 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_58473697_TT/- chr12:58473697-58473698 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_58542001_-/GAAA chr12:58542000-58542001 GAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_58569887_ACAC/- chr12:58569887-58569890 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_58825091_TGTG/-/TG chr12:58825091-58825094 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_58825091_TGTG/-/TG chr12:58825091-58825094 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_59686249_TGTG/-/TG chr12:59686249-59686252 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_59686249_TGTG/-/TG chr12:59686249-59686252 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_62257773_TT/- chr12:62257773-62257774 - ENSMUSG00000113395.1 ENSMUST00000220734.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=75;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_63691677_A/G chr12:63691677 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_63817454_ACAC/- chr12:63817454-63817457 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_63965214_TG/- chr12:63965214-63965215 - ENSMUSG00000113602.1 ENSMUST00000223393.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2513;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_64407388_TGTG/- chr12:64407388-64407391 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_64489599_AA/-/A/AAA chr12:64489599-64489600 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_64489599_AA/-/A/AAA chr12:64489599-64489600 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_64489599_AA/-/A/AAA chr12:64489599-64489600 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_64969359_TGTG/- chr12:64969359-64969362 - ENSMUSG00000035614.11 ENSMUST00000066296.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_64969359_TGTG/- chr12:64969359-64969362 - ENSMUSG00000035614.11 ENSMUST00000221836.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_64969359_TGTG/- chr12:64969359-64969362 - ENSMUSG00000020948.9 ENSMUST00000221957.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3846;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_64969359_TGTG/- chr12:64969359-64969362 - ENSMUSG00000020948.9 ENSMUST00000222508.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3825;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_64969359_TGTG/- chr12:64969359-64969362 - ENSMUSG00000035614.11 ENSMUST00000223166.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_65022707_G/T chr12:65022707 T ENSMUSG00000035614.11 ENSMUST00000066296.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=134;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_65022707_G/T chr12:65022707 T ENSMUSG00000035614.11 ENSMUST00000222425.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=136;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_65022707_G/T chr12:65022707 T ENSMUSG00000035614.11 ENSMUST00000222473.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1090;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_65022707_G/T chr12:65022707 T ENSMUSG00000035614.11 ENSMUST00000223166.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=134;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_66164995_T/A chr12:66164995 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_66165001_T/C chr12:66165001 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_66274532_ATAT/-/ATATAT chr12:66274532-66274535 - ENSMUSG00000113531.1 ENSMUST00000222565.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4481;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_66274532_ATAT/-/ATATAT chr12:66274532-66274535 ATATAT ENSMUSG00000113531.1 ENSMUST00000222565.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4481;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_66963256_AA/- chr12:66963256-66963257 - ENSMUSG00000034912.17 ENSMUST00000037181.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_66963256_AA/- chr12:66963256-66963257 - ENSMUSG00000034912.17 ENSMUST00000101379.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_66963256_AA/- chr12:66963256-66963257 - ENSMUSG00000034912.17 ENSMUST00000178814.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_66963256_AA/- chr12:66963256-66963257 - ENSMUSG00000034912.17 ENSMUST00000222167.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_66963256_AA/- chr12:66963256-66963257 - ENSMUSG00000034912.17 ENSMUST00000223141.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69230394_AA/- chr12:69230394-69230395 - ENSMUSG00000020974.6 ENSMUST00000021359.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2199;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69230394_AA/- chr12:69230394-69230395 - ENSMUSG00000113190.1 ENSMUST00000220745.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69230394_AA/- chr12:69230394-69230395 - ENSMUSG00000020974.6 ENSMUST00000221411.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2215;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69255415_GAGA/-/GA chr12:69255415-69255418 - ENSMUSG00000051890.13 ENSMUST00000063445.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69255415_GAGA/-/GA chr12:69255415-69255418 GA ENSMUSG00000051890.13 ENSMUST00000063445.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69255415_GAGA/-/GA chr12:69255415-69255418 - ENSMUSG00000051890.13 ENSMUST00000173419.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69255415_GAGA/-/GA chr12:69255415-69255418 GA ENSMUSG00000051890.13 ENSMUST00000173419.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69281145_-/TTGTC chr12:69281144-69281145 TTGTC ENSMUSG00000051890.13 ENSMUST00000063445.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69281145_-/TTGTC chr12:69281144-69281145 TTGTC ENSMUSG00000051890.13 ENSMUST00000173419.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69759623_GCA/- chr12:69759623-69759625 - ENSMUSG00000020990.5 ENSMUST00000021377.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69759623_GCA/- chr12:69759623-69759625 - ENSMUSG00000076065.1 ENSMUST00000102111.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4210;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69759629_GG/- chr12:69759629-69759630 - ENSMUSG00000020990.5 ENSMUST00000021377.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69759629_GG/- chr12:69759629-69759630 - ENSMUSG00000076065.1 ENSMUST00000102111.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4205;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69801877_TT/- chr12:69801877-69801878 - ENSMUSG00000034761.15 ENSMUST00000049239.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1881;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69801877_TT/- chr12:69801877-69801878 - ENSMUSG00000034761.15 ENSMUST00000110567.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1872;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69801877_TT/- chr12:69801877-69801878 - ENSMUSG00000034761.15 ENSMUST00000110570.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1872;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69801877_TT/- chr12:69801877-69801878 - ENSMUSG00000034761.15 ENSMUST00000126584.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1883;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69801877_TT/- chr12:69801877-69801878 - ENSMUSG00000034761.15 ENSMUST00000153712.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1872;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69801877_TT/- chr12:69801877-69801878 - ENSMUSG00000034761.15 ENSMUST00000171211.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1881;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69801877_TT/- chr12:69801877-69801878 - ENSMUSG00000020992.5 ENSMUST00000188608.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69938839_AC/- chr12:69938839-69938840 - ENSMUSG00000021066.9 ENSMUST00000021466.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_69938839_AC/- chr12:69938839-69938840 - ENSMUSG00000021066.9 ENSMUST00000222141.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 - ENSMUSG00000090121.10 ENSMUST00000161541.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1089;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 T ENSMUSG00000090121.10 ENSMUST00000161541.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1089;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 - ENSMUSG00000090121.10 ENSMUST00000162570.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 T ENSMUSG00000090121.10 ENSMUST00000162570.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 - ENSMUSG00000090121.10 ENSMUST00000169156.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 T ENSMUSG00000090121.10 ENSMUST00000169156.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 - ENSMUSG00000090121.10 ENSMUST00000182512.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 T ENSMUSG00000090121.10 ENSMUST00000182512.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 - ENSMUSG00000090121.10 ENSMUST00000182782.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 T ENSMUSG00000090121.10 ENSMUST00000182782.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 - ENSMUSG00000090121.10 ENSMUST00000182927.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70180958_TT/-/T chr12:70180958-70180959 T ENSMUSG00000090121.10 ENSMUST00000182927.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000110520.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000110520.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000110522.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000110522.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000167755.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000167755.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000220557.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000220557.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000221041.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000221041.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000221294.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000221294.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000221370.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000221370.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000222316.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000222316.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 - ENSMUSG00000021071.16 ENSMUST00000223160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70299663_ACAC/-/AC chr12:70299663-70299666 AC ENSMUSG00000021071.16 ENSMUST00000223160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70419514_G/A chr12:70419514 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_70667956_T/A chr12:70667956 A ENSMUSG00000114005.1 ENSMUST00000220504.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70683624_C/T chr12:70683624 T ENSMUSG00000114005.1 ENSMUST00000220504.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70683624_C/T chr12:70683624 T ENSMUSG00000112950.1 ENSMUST00000222630.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1774;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_70810430_-/C chr12:70810429-70810430 C ENSMUSG00000113900.1 ENSMUST00000222338.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_71375825_-/TTC chr12:71375824-71375825 TTC ENSMUSG00000113441.1 ENSMUST00000221650.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_71413199_TGTGTGTG/-/TGTGTG chr12:71413199-71413206 - ENSMUSG00000113441.1 ENSMUST00000221650.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_71413199_TGTGTGTG/-/TGTGTG chr12:71413199-71413206 TGTGTG ENSMUSG00000113441.1 ENSMUST00000221650.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_71547216_CACA/-/CA chr12:71547216-71547219 - ENSMUSG00000113630.1 ENSMUST00000220948.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_71547216_CACA/-/CA chr12:71547216-71547219 CA ENSMUSG00000113630.1 ENSMUST00000220948.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_71547216_CACA/-/CA chr12:71547216-71547219 - ENSMUSG00000113630.1 ENSMUST00000222756.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_71547216_CACA/-/CA chr12:71547216-71547219 CA ENSMUSG00000113630.1 ENSMUST00000222756.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_72291499_ACAC/-/AC chr12:72291499-72291502 - ENSMUSG00000021087.18 ENSMUST00000078505.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_72291499_ACAC/-/AC chr12:72291499-72291502 AC ENSMUSG00000021087.18 ENSMUST00000078505.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_72670655_TGTG/- chr12:72670655-72670658 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_72973619_ACAC/-/AC/ACACAC chr12:72973619-72973622 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_72973619_ACAC/-/AC/ACACAC chr12:72973619-72973622 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_72973619_ACAC/-/AC/ACACAC chr12:72973619-72973622 ACACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_73047598_AAA/- chr12:73047598-73047600 - ENSMUSG00000051367.8 ENSMUST00000050029.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=419;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73047598_AAA/- chr12:73047598-73047600 - ENSMUSG00000051367.8 ENSMUST00000175677.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2307;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73047598_AAA/- chr12:73047598-73047600 - ENSMUSG00000051367.8 ENSMUST00000176091.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73047598_AAA/- chr12:73047598-73047600 - ENSMUSG00000051367.8 ENSMUST00000176310.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73155001_C/T chr12:73155001 T ENSMUSG00000021103.12 ENSMUST00000021523.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73155001_C/T chr12:73155001 T ENSMUSG00000021103.12 ENSMUST00000187549.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73155001_C/T chr12:73155001 T ENSMUSG00000021103.12 ENSMUST00000189644.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73359636_TGTG/-/TG chr12:73359636-73359639 - ENSMUSG00000056359.6 ENSMUST00000070425.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4436;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73359636_TGTG/-/TG chr12:73359636-73359639 TG ENSMUSG00000056359.6 ENSMUST00000070425.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4436;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73359636_TGTG/-/TG chr12:73359636-73359639 - ENSMUSG00000056359.6 ENSMUST00000221180.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4436;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73359636_TGTG/-/TG chr12:73359636-73359639 TG ENSMUSG00000056359.6 ENSMUST00000221180.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4436;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73359636_TGTG/-/TG chr12:73359636-73359639 - ENSMUSG00000113425.1 ENSMUST00000222671.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73359636_TGTG/-/TG chr12:73359636-73359639 TG ENSMUSG00000113425.1 ENSMUST00000222671.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73581195_-/CTTT chr12:73581194-73581195 CTTT ENSMUSG00000021108.18 ENSMUST00000021527.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3602;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73581195_-/CTTT chr12:73581194-73581195 CTTT ENSMUSG00000021108.18 ENSMUST00000119092.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3648;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73581195_-/CTTT chr12:73581194-73581195 CTTT ENSMUSG00000021108.18 ENSMUST00000221153.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3601;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73900522_-/GTGT chr12:73900521-73900522 GTGT ENSMUSG00000021109.13 ENSMUST00000110461.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=853;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_73900522_-/GTGT chr12:73900521-73900522 GTGT ENSMUSG00000087700.2 ENSMUST00000221427.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74185905_CA/C/CAA/AA chr12:74185905-74185906 C ENSMUSG00000044912.10 ENSMUST00000110451.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74185905_CA/C/CAA/AA chr12:74185905-74185906 CAA ENSMUSG00000044912.10 ENSMUST00000110451.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74185905_CA/C/CAA/AA chr12:74185905-74185906 AA ENSMUSG00000044912.10 ENSMUST00000110451.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74185905_CA/C/CAA/AA chr12:74185905-74185906 C ENSMUSG00000044912.10 ENSMUST00000221220.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74185905_CA/C/CAA/AA chr12:74185905-74185906 CAA ENSMUSG00000044912.10 ENSMUST00000221220.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74185905_CA/C/CAA/AA chr12:74185905-74185906 AA ENSMUSG00000044912.10 ENSMUST00000221220.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74314086_TTC/- chr12:74314086-74314088 - ENSMUSG00000079061.3 ENSMUST00000110441.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1022;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74314086_TTC/- chr12:74314086-74314088 - ENSMUSG00000113031.1 ENSMUST00000223381.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=113;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_74694295_CACA/-/CA chr12:74694295-74694298 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_74694295_CACA/-/CA chr12:74694295-74694298 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_75707807_-/ATAG chr12:75707806-75707807 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_76867618_ACAC/-/AC chr12:76867618-76867621 - ENSMUSG00000033373.16 ENSMUST00000041008.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_76867618_ACAC/-/AC chr12:76867618-76867621 AC ENSMUSG00000033373.16 ENSMUST00000041008.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_76867618_ACAC/-/AC chr12:76867618-76867621 - ENSMUSG00000033373.16 ENSMUST00000123887.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_76867618_ACAC/-/AC chr12:76867618-76867621 AC ENSMUSG00000033373.16 ENSMUST00000123887.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_76867618_ACAC/-/AC chr12:76867618-76867621 - ENSMUSG00000033373.16 ENSMUST00000125842.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_76867618_ACAC/-/AC chr12:76867618-76867621 AC ENSMUSG00000033373.16 ENSMUST00000125842.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_76867618_ACAC/-/AC chr12:76867618-76867621 - ENSMUSG00000033373.16 ENSMUST00000137826.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_76867618_ACAC/-/AC chr12:76867618-76867621 AC ENSMUSG00000033373.16 ENSMUST00000137826.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_77664456_GG/-/G chr12:77664456-77664457 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_77664456_GG/-/G chr12:77664456-77664457 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_77937733_TGTG/- chr12:77937733-77937736 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_78951858_-/AGAT chr12:78951857-78951858 AGAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_79114337_A/C chr12:79114337 C ENSMUSG00000112708.1 ENSMUST00000218693.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=313;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_79310401_-/ACAC chr12:79310400-79310401 ACAC ENSMUSG00000059060.15 ENSMUST00000079533.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_79310401_-/ACAC chr12:79310400-79310401 ACAC ENSMUSG00000059060.15 ENSMUST00000171210.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_79310401_-/ACAC chr12:79310400-79310401 ACAC ENSMUSG00000059060.15 ENSMUST00000218039.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_79615206_AAGA/- chr12:79615206-79615209 - ENSMUSG00000059060.15 ENSMUST00000171210.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_79615206_AAGA/- chr12:79615206-79615209 - ENSMUSG00000059060.15 ENSMUST00000218039.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_79615206_AAGA/- chr12:79615206-79615209 - ENSMUSG00000059060.15 ENSMUST00000221257.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80104898_-/AAGG chr12:80104897-80104898 AAGG ENSMUSG00000021127.7 ENSMUST00000021552.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2856;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80104898_-/AAGG chr12:80104897-80104898 AAGG ENSMUSG00000021127.7 ENSMUST00000165114.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3800;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80104898_-/AAGG chr12:80104897-80104898 AAGG ENSMUSG00000097417.1 ENSMUST00000181323.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3136;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80104898_-/AAGG chr12:80104897-80104898 AAGG ENSMUSG00000021127.7 ENSMUST00000218835.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4654;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80104898_-/AAGG chr12:80104897-80104898 AAGG ENSMUSG00000021127.7 ENSMUST00000219642.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3858;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80104898_-/AAGG chr12:80104897-80104898 AAGG ENSMUSG00000112386.1 ENSMUST00000219740.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3725;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80274068_TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC/- chr12:80274068-80274103 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_80466858_AA/-/AAAAAAAAAAAAAAAAAAAAA chr12:80466858-80466859 - ENSMUSG00000032705.9 ENSMUST00000038185.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80466858_AA/-/AAAAAAAAAAAAAAAAAAAAA chr12:80466858-80466859 AAAAAAAAAAAAAAAAAAAAA ENSMUSG00000032705.9 ENSMUST00000038185.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80466858_AA/-/AAAAAAAAAAAAAAAAAAAAA chr12:80466858-80466859 - ENSMUSG00000032705.9 ENSMUST00000219272.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_80466858_AA/-/AAAAAAAAAAAAAAAAAAAAA chr12:80466858-80466859 AAAAAAAAAAAAAAAAAAAAA ENSMUSG00000032705.9 ENSMUST00000219272.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_81456929_AA/- chr12:81456929-81456930 - ENSMUSG00000091803.7 ENSMUST00000110340.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_81456929_AA/- chr12:81456929-81456930 - ENSMUSG00000021139.17 ENSMUST00000164386.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_81456929_AA/- chr12:81456929-81456930 - ENSMUSG00000091803.7 ENSMUST00000166723.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_81694087_-/TT chr12:81694086-81694087 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 - ENSMUSG00000042700.16 ENSMUST00000166429.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 T ENSMUSG00000042700.16 ENSMUST00000166429.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 TTT ENSMUSG00000042700.16 ENSMUST00000166429.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 - ENSMUSG00000042700.16 ENSMUST00000220963.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 T ENSMUSG00000042700.16 ENSMUST00000220963.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 TTT ENSMUSG00000042700.16 ENSMUST00000220963.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 - ENSMUSG00000042700.16 ENSMUST00000222298.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 T ENSMUSG00000042700.16 ENSMUST00000222298.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 TTT ENSMUSG00000042700.16 ENSMUST00000222298.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 - ENSMUSG00000042700.16 ENSMUST00000222714.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 T ENSMUSG00000042700.16 ENSMUST00000222714.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 TTT ENSMUSG00000042700.16 ENSMUST00000222714.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 - ENSMUSG00000042700.16 ENSMUST00000222849.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 T ENSMUSG00000042700.16 ENSMUST00000222849.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82264867_TT/-/T/TTT chr12:82264867-82264868 TTT ENSMUSG00000042700.16 ENSMUST00000222849.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000161801.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000185665.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000186081.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000186309.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000186458.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000186848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000200861.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000200911.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000201271.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000201602.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000201861.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640400_C/G chr12:82640400 G ENSMUSG00000021219.16 ENSMUST00000202210.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000161801.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000185665.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000186081.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000186309.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000186458.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000186848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000200861.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000200911.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000201271.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000201602.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000201861.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82640426_G/A chr12:82640426 A ENSMUSG00000021219.16 ENSMUST00000202210.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000101234.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000161801.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000185665.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000185674.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000186081.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000186309.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000186323.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000186458.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000186848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000191107.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000191311.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000191352.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000200861.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000200911.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000201271.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000201602.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000201861.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_82754994_GTGT/- chr12:82754994-82754997 - ENSMUSG00000021219.16 ENSMUST00000202210.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83706491_AA/- chr12:83706491-83706492 - ENSMUSG00000019969.14 ENSMUST00000041806.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83706491_AA/- chr12:83706491-83706492 - ENSMUSG00000019969.14 ENSMUST00000101225.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83706491_AA/- chr12:83706491-83706492 - ENSMUSG00000019969.14 ENSMUST00000221993.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83706491_AA/- chr12:83706491-83706492 - ENSMUSG00000019969.14 ENSMUST00000223542.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000021647.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000085215.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000110298.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000117217.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000129335.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000135962.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3201;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000136848.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3272;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000154043.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_83804905_T/- chr12:83804905 - ENSMUSG00000021224.15 ENSMUST00000155112.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_84223090_GTGT/-/GT chr12:84223090-84223093 - ENSMUSG00000042507.15 ENSMUST00000046266.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4209;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_84223090_GTGT/-/GT chr12:84223090-84223093 GT ENSMUSG00000042507.15 ENSMUST00000046266.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4209;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_84223090_GTGT/-/GT chr12:84223090-84223093 - ENSMUSG00000042507.15 ENSMUST00000220974.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4209;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_84223090_GTGT/-/GT chr12:84223090-84223093 GT ENSMUSG00000042507.15 ENSMUST00000220974.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4209;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_84765501_TT/- chr12:84765501-84765502 - ENSMUSG00000021242.9 ENSMUST00000021668.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_84765501_TT/- chr12:84765501-84765502 - ENSMUSG00000021242.9 ENSMUST00000221056.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_84765501_TT/- chr12:84765501-84765502 - ENSMUSG00000021242.9 ENSMUST00000223200.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2961;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85361424_G/A chr12:85361424 A ENSMUSG00000021248.9 ENSMUST00000040766.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85361424_G/A chr12:85361424 A ENSMUSG00000113072.1 ENSMUST00000220964.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4247;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85361424_G/A chr12:85361424 A ENSMUSG00000021248.9 ENSMUST00000222585.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85361424_G/A chr12:85361424 A ENSMUSG00000113752.1 ENSMUST00000222887.1 Transcript non_coding_transcript_exon_variant 2222 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85605015_GG/- chr12:85605015-85605016 - ENSMUSG00000034271.16 ENSMUST00000050687.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85605015_GG/- chr12:85605015-85605016 - ENSMUSG00000034271.16 ENSMUST00000171754.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85605015_GG/- chr12:85605015-85605016 - ENSMUSG00000034271.16 ENSMUST00000177587.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_85605015_GG/- chr12:85605015-85605016 - ENSMUSG00000034271.16 ENSMUST00000222689.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86547336_AAAA/- chr12:86547336-86547339 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_86625333_GTGTGTGTGTGAGTGTGTGTGTATGTGTGTGTGAGAGAATGTATGTGTGTATGTGTGTGTGTGAGCGTTGTGTATGTGAGTGTGTGTGAGTGTGTGTGAGTGAGTATGTGTGTGTGTGTGTCTGTGTGTCTGTGTGTGTGT/- chr12:86625333-86625473 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_86660142_-/GAAG chr12:86660141-86660142 GAAG ENSMUSG00000075832.1 ENSMUST00000101884.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4910;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 - ENSMUSG00000059114.8 ENSMUST00000095527.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 TCTC ENSMUSG00000059114.8 ENSMUST00000095527.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 - ENSMUSG00000059114.8 ENSMUST00000222180.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 TCTC ENSMUSG00000059114.8 ENSMUST00000222180.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 - ENSMUSG00000059114.8 ENSMUST00000223197.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 TCTC ENSMUSG00000059114.8 ENSMUST00000223197.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 - ENSMUSG00000059114.8 ENSMUST00000223308.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_86747624_TCTCTC/-/TCTC chr12:86747624-86747629 TCTC ENSMUSG00000059114.8 ENSMUST00000223308.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88741933_TGTG/- chr12:88741933-88741936 - ENSMUSG00000066392.11 ENSMUST00000110138.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88741933_TGTG/- chr12:88741933-88741936 - ENSMUSG00000066392.11 ENSMUST00000163944.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88741933_TGTG/- chr12:88741933-88741936 - ENSMUSG00000066392.11 ENSMUST00000167103.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88741933_TGTG/- chr12:88741933-88741936 - ENSMUSG00000066392.11 ENSMUST00000167734.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88741933_TGTG/- chr12:88741933-88741936 - ENSMUSG00000066392.11 ENSMUST00000190030.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88741933_TGTG/- chr12:88741933-88741936 - ENSMUSG00000066392.11 ENSMUST00000190626.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88777743_C/T chr12:88777743 T ENSMUSG00000066392.11 ENSMUST00000110138.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88777743_C/T chr12:88777743 T ENSMUSG00000066392.11 ENSMUST00000163944.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88777743_C/T chr12:88777743 T ENSMUSG00000066392.11 ENSMUST00000167103.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88777743_C/T chr12:88777743 T ENSMUSG00000066392.11 ENSMUST00000167734.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88777743_C/T chr12:88777743 T ENSMUSG00000066392.11 ENSMUST00000190030.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_88777743_C/T chr12:88777743 T ENSMUSG00000066392.11 ENSMUST00000190626.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89069953_A/C chr12:89069953 C ENSMUSG00000066392.11 ENSMUST00000057634.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89069953_A/C chr12:89069953 C ENSMUSG00000066392.11 ENSMUST00000163134.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89069953_A/C chr12:89069953 C ENSMUSG00000066392.11 ENSMUST00000167103.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89069953_A/C chr12:89069953 C ENSMUSG00000066392.11 ENSMUST00000167734.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89069953_A/C chr12:89069953 C ENSMUSG00000066392.11 ENSMUST00000170533.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89069953_A/C chr12:89069953 C ENSMUSG00000066392.11 ENSMUST00000190626.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89803942_-/AGAGAGAGAGAGAGAGAGAGAGAG chr12:89803941-89803942 AGAGAGAGAGAGAGAGAGAGAGAG ENSMUSG00000066392.11 ENSMUST00000057634.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89803942_-/AGAGAGAGAGAGAGAGAGAGAGAG chr12:89803941-89803942 AGAGAGAGAGAGAGAGAGAGAGAG ENSMUSG00000066392.11 ENSMUST00000163134.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89803942_-/AGAGAGAGAGAGAGAGAGAGAGAG chr12:89803941-89803942 AGAGAGAGAGAGAGAGAGAGAGAG ENSMUSG00000066392.11 ENSMUST00000167103.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89803942_-/AGAGAGAGAGAGAGAGAGAGAGAG chr12:89803941-89803942 AGAGAGAGAGAGAGAGAGAGAGAG ENSMUSG00000066392.11 ENSMUST00000167887.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_89803942_-/AGAGAGAGAGAGAGAGAGAGAGAG chr12:89803941-89803942 AGAGAGAGAGAGAGAGAGAGAGAG ENSMUSG00000066392.11 ENSMUST00000190626.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90015057_AAAA/- chr12:90015057-90015060 - ENSMUSG00000066392.11 ENSMUST00000057634.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90015057_AAAA/- chr12:90015057-90015060 - ENSMUSG00000066392.11 ENSMUST00000110130.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90015057_AAAA/- chr12:90015057-90015060 - ENSMUSG00000066392.11 ENSMUST00000110133.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90015057_AAAA/- chr12:90015057-90015060 - ENSMUSG00000066392.11 ENSMUST00000163134.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90015057_AAAA/- chr12:90015057-90015060 - ENSMUSG00000066392.11 ENSMUST00000167103.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90015057_AAAA/- chr12:90015057-90015060 - ENSMUSG00000066392.11 ENSMUST00000167887.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90015057_AAAA/- chr12:90015057-90015060 - ENSMUSG00000066392.11 ENSMUST00000190626.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90245249_-/C chr12:90245248-90245249 C ENSMUSG00000066392.11 ENSMUST00000057634.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90245249_-/C chr12:90245248-90245249 C ENSMUSG00000066392.11 ENSMUST00000110130.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90245249_-/C chr12:90245248-90245249 C ENSMUSG00000066392.11 ENSMUST00000110133.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90245249_-/C chr12:90245248-90245249 C ENSMUSG00000066392.11 ENSMUST00000163134.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90245249_-/C chr12:90245248-90245249 C ENSMUSG00000066392.11 ENSMUST00000167103.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90245249_-/C chr12:90245248-90245249 C ENSMUSG00000066392.11 ENSMUST00000167887.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90245249_-/C chr12:90245248-90245249 C ENSMUSG00000066392.11 ENSMUST00000190626.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 - ENSMUSG00000097071.2 ENSMUST00000181184.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3283;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 TG ENSMUSG00000097071.2 ENSMUST00000181184.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3283;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 - ENSMUSG00000097157.2 ENSMUST00000181874.1 Transcript non_coding_transcript_exon_variant 2271-2274 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 TG ENSMUSG00000097157.2 ENSMUST00000181874.1 Transcript non_coding_transcript_exon_variant 2271-2274 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 - ENSMUSG00000097157.2 ENSMUST00000220857.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 TG ENSMUSG00000097157.2 ENSMUST00000220857.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2287;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 - ENSMUSG00000097157.2 ENSMUST00000221942.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90749922_TGTG/-/TG chr12:90749922-90749925 TG ENSMUSG00000097157.2 ENSMUST00000221942.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90841368_A/T chr12:90841368 T ENSMUSG00000097071.2 ENSMUST00000181184.1 Transcript non_coding_transcript_exon_variant 502 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90841368_A/T chr12:90841368 T ENSMUSG00000097157.2 ENSMUST00000221942.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90841374_AC/GT chr12:90841374-90841375 GT ENSMUSG00000097071.2 ENSMUST00000181184.1 Transcript non_coding_transcript_exon_variant 495-496 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_90841374_AC/GT chr12:90841374-90841375 GT ENSMUSG00000097157.2 ENSMUST00000221942.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_91419245_GTGT/-/GT chr12:91419245-91419248 - ENSMUSG00000020963.15 ENSMUST00000021343.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_91419245_GTGT/-/GT chr12:91419245-91419248 GT ENSMUSG00000020963.15 ENSMUST00000021343.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_91419245_GTGT/-/GT chr12:91419245-91419248 - ENSMUSG00000020963.15 ENSMUST00000021346.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_91419245_GTGT/-/GT chr12:91419245-91419248 GT ENSMUSG00000020963.15 ENSMUST00000021346.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_91419245_GTGT/-/GT chr12:91419245-91419248 - ENSMUSG00000020963.15 ENSMUST00000221216.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_91419245_GTGT/-/GT chr12:91419245-91419248 GT ENSMUSG00000020963.15 ENSMUST00000221216.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_91634144_A/G chr12:91634144 G ENSMUSG00000020961.15 ENSMUST00000052969.14 Transcript 3_prime_UTR_variant 8761 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_92117209_T/A chr12:92117209 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_92248323_C/- chr12:92248323 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_93397495_AAGA/- chr12:93397495-93397498 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_93421591_-/ATCT chr12:93421590-93421591 ATCT ENSMUSG00000113164.1 ENSMUST00000223202.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_93590867_T/C chr12:93590867 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_93639003_-/A chr12:93639002-93639003 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94017648_A/T chr12:94017648 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94295878_GTGT/-/GT chr12:94295878-94295881 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94295878_GTGT/-/GT chr12:94295878-94295881 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94735056_ATAT/-/AT chr12:94735056-94735059 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94735056_ATAT/-/AT chr12:94735056-94735059 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94771327_TT/-/T chr12:94771327-94771328 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94771327_TT/-/T chr12:94771327-94771328 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_94779016_G/A chr12:94779016 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_95248558_C/T chr12:95248558 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_95558364_C/G chr12:95558364 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_95647384_A/T chr12:95647384 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_95822663_G/A chr12:95822663 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_95822668_G/A chr12:95822668 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_96788041_C/A chr12:96788041 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_97047332_C/T chr12:97047332 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_97241974_TC/- chr12:97241974-97241975 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_97665728_-/AAAAC chr12:97665727-97665728 AAAAC ENSMUSG00000112584.1 ENSMUST00000218347.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1398;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_98316647_CTCT/- chr12:98316647-98316650 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_99018170_TGTG/- chr12:99018170-99018173 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_99165160_-/TTCT chr12:99165159-99165160 TTCT ENSMUSG00000113210.1 ENSMUST00000223511.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2351;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_99527817_GG/- chr12:99527817-99527818 - ENSMUSG00000033713.12 ENSMUST00000176928.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_99527817_GG/- chr12:99527817-99527818 - ENSMUSG00000033713.12 ENSMUST00000221283.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_99527817_GG/- chr12:99527817-99527818 - ENSMUSG00000033713.12 ENSMUST00000222918.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_99527817_GG/- chr12:99527817-99527818 - ENSMUSG00000033713.12 ENSMUST00000223484.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_100009338_TGTGTGGTGTGGTGTGTGTGTAGTGTGTGTGGTGATTGTGGTGGTGTGGTGTATGTGTGGTGTGGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGGTGGTGGTGGTAGTGGTGTGTGTGTGGTGTGGTATATGTGTGGTGTGGTGTGTGTGTGTATGGTGTGTGTGTGTGTGTGTGGTAGTATGGATG/- chr12:100009338-100009527 - ENSMUSG00000045404.16 ENSMUST00000049788.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_100009338_TGTGTGGTGTGGTGTGTGTGTAGTGTGTGTGGTGATTGTGGTGGTGTGGTGTATGTGTGGTGTGGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGGTGGTGGTGGTAGTGGTGTGTGTGTGGTGTGGTATATGTGTGGTGTGGTGTGTGTGTGTATGGTGTGTGTGTGTGTGTGTGGTAGTATGGATG/- chr12:100009338-100009527 - ENSMUSG00000045404.16 ENSMUST00000160413.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_100009338_TGTGTGGTGTGGTGTGTGTGTAGTGTGTGTGGTGATTGTGGTGGTGTGGTGTATGTGTGGTGTGGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGGTGGTGGTGGTAGTGGTGTGTGTGTGGTGTGGTATATGTGTGGTGTGGTGTGTGTGTGTATGGTGTGTGTGTGTGTGTGTGGTAGTATGGATG/- chr12:100009338-100009527 - ENSMUSG00000045404.16 ENSMUST00000177549.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_100172514_-/AA chr12:100172513-100172514 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_101854329_GTGT/-/GT chr12:101854329-101854332 - ENSMUSG00000021188.14 ENSMUST00000021605.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_101854329_GTGT/-/GT chr12:101854329-101854332 GT ENSMUSG00000021188.14 ENSMUST00000021605.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_101854329_GTGT/-/GT chr12:101854329-101854332 - ENSMUSG00000021188.14 ENSMUST00000177183.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_101854329_GTGT/-/GT chr12:101854329-101854332 GT ENSMUSG00000021188.14 ENSMUST00000177183.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_102108288_GGAGGGAGGGAGGGAGGGAGAGATAGAGAT/- chr12:102108288-102108317 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_102117409_TG/- chr12:102117409-102117410 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_102481942_A/- chr12:102481942 - ENSMUSG00000021192.16 ENSMUST00000021609.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_102481942_A/- chr12:102481942 - ENSMUSG00000021192.16 ENSMUST00000179218.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_102481942_A/- chr12:102481942 - ENSMUSG00000021192.16 ENSMUST00000222744.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2515;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103260740_G/C chr12:103260740 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_103637557_TTCC/- chr12:103637557-103637560 - ENSMUSG00000101916.1 ENSMUST00000185363.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3846;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103787847_TGTG/- chr12:103787847-103787850 - ENSMUSG00000071178.11 ENSMUST00000164454.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103787847_TGTG/- chr12:103787847-103787850 - ENSMUSG00000090466.1 ENSMUST00000164621.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103853506_ACAC/-/AC chr12:103853506-103853509 - ENSMUSG00000066366.14 ENSMUST00000072876.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=80;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103853506_ACAC/-/AC chr12:103853506-103853509 AC ENSMUSG00000066366.14 ENSMUST00000072876.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=80;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103853506_ACAC/-/AC chr12:103853506-103853509 - ENSMUSG00000066366.14 ENSMUST00000085056.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=82;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103853506_ACAC/-/AC chr12:103853506-103853509 AC ENSMUSG00000066366.14 ENSMUST00000085056.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=82;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103853506_ACAC/-/AC chr12:103853506-103853509 - ENSMUSG00000066366.14 ENSMUST00000124717.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4255;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_103853506_ACAC/-/AC chr12:103853506-103853509 AC ENSMUSG00000066366.14 ENSMUST00000124717.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4255;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_104013175_ACACACACACACAC/- chr12:104013175-104013188 - ENSMUSG00000058260.2 ENSMUST00000058464.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_104013175_ACACACACACACAC/- chr12:104013175-104013188 - ENSMUSG00000058260.2 ENSMUST00000164023.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_104058285_-/TAGA chr12:104058284-104058285 TAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_105076297_CACA/-/CACACA chr12:105076297-105076300 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_105076297_CACA/-/CACACA chr12:105076297-105076300 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_105171156_GTGT/- chr12:105171156-105171159 - ENSMUSG00000066359.6 ENSMUST00000085043.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4531;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_105171156_GTGT/- chr12:105171156-105171159 - ENSMUSG00000066359.6 ENSMUST00000222342.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4825;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_105292727_CC/-/C chr12:105292727-105292728 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_105292727_CC/-/C chr12:105292727-105292728 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_105757180_AA/GG chr12:105757180-105757181 GG ENSMUSG00000041323.6 ENSMUST00000040876.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_106483558_T/A chr12:106483558 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_106892604_TCTCAGACTCACACACACACACTTACTCACACAATACTCT/- chr12:106892604-106892643 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_107158095_-/GAAGAA chr12:107158094-107158095 GAAGAA ENSMUSG00000086060.1 ENSMUST00000148122.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_107306674_TGTG/-/TG chr12:107306674-107306677 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_107306674_TGTG/-/TG chr12:107306674-107306677 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_107392816_ACACAC/- chr12:107392816-107392821 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_107392866_GAGA/- chr12:107392866-107392869 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_107826704_CTCT/- chr12:107826704-107826707 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_108457459_GTGT/- chr12:108457459-108457462 - ENSMUSG00000058070.14 ENSMUST00000054955.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108457459_GTGT/- chr12:108457459-108457462 - ENSMUSG00000058070.14 ENSMUST00000109857.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108457459_GTGT/- chr12:108457459-108457462 - ENSMUSG00000058070.14 ENSMUST00000109860.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108457459_GTGT/- chr12:108457459-108457462 - ENSMUSG00000058070.14 ENSMUST00000130999.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108457459_GTGT/- chr12:108457459-108457462 - ENSMUSG00000058070.14 ENSMUST00000138456.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108733781_AAA/- chr12:108733781-108733783 - ENSMUSG00000114102.1 ENSMUST00000222878.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3358;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 - ENSMUSG00000040877.16 ENSMUST00000047115.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 TT ENSMUSG00000040877.16 ENSMUST00000047115.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 - ENSMUSG00000040877.16 ENSMUST00000167816.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 TT ENSMUSG00000040877.16 ENSMUST00000167816.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 - ENSMUSG00000040877.16 ENSMUST00000220495.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 TT ENSMUSG00000040877.16 ENSMUST00000220495.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 - ENSMUSG00000040877.16 ENSMUST00000223054.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_108970476_TTT/-/TT chr12:108970476-108970478 TT ENSMUSG00000040877.16 ENSMUST00000223054.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_109113776_-/ATCT chr12:109113775-109113776 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_109206275_TT/-/T/TTT chr12:109206275-109206276 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_109206275_TT/-/T/TTT chr12:109206275-109206276 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_109206275_TT/-/T/TTT chr12:109206275-109206276 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_109860097_GTGT/-/GT chr12:109860097-109860100 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_109860097_GTGT/-/GT chr12:109860097-109860100 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_111177918_-/G chr12:111177917-111177918 G ENSMUSG00000021277.16 ENSMUST00000021706.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_111177918_-/G chr12:111177917-111177918 G ENSMUSG00000021277.16 ENSMUST00000060274.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_111177918_-/G chr12:111177917-111177918 G ENSMUSG00000021277.16 ENSMUST00000117269.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_111177918_-/G chr12:111177917-111177918 G ENSMUSG00000083193.1 ENSMUST00000121608.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_111177918_-/G chr12:111177917-111177918 G ENSMUSG00000021277.16 ENSMUST00000139162.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_113170553_AAA/- chr12:113170553-113170555 - ENSMUSG00000037466.13 ENSMUST00000196755.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4505;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_113170553_AAA/- chr12:113170553-113170555 - ENSMUSG00000105111.1 ENSMUST00000198975.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1932;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_113700244_G/T chr12:113700244 T ENSMUSG00000095429.1 ENSMUST00000103450.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1880;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_114414328_-/TGTGTGTGTGTGTGTG chr12:114414327-114414328 TGTGTGTGTGTGTGTG ENSMUSG00000096407.2 ENSMUST00000179796.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2271;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_114414328_-/TGTGTGTGTGTGTGTG chr12:114414327-114414328 TGTGTGTGTGTGTGTG ENSMUSG00000096407.2 ENSMUST00000193936.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2268;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_114735650_A/G chr12:114735650 G ENSMUSG00000102654.1 ENSMUST00000194856.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4758;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_114735650_A/G chr12:114735650 G ENSMUSG00000102678.1 ENSMUST00000195790.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=595;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115070460_AAATAAAT/- chr12:115070460-115070467 - ENSMUSG00000102364.1 ENSMUST00000194257.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115100005_G/A chr12:115100005 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_115872331_TT/-/T chr12:115872331-115872332 - ENSMUSG00000096326.2 ENSMUST00000163670.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3265;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115872331_TT/-/T chr12:115872331-115872332 T ENSMUSG00000096326.2 ENSMUST00000163670.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3265;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115872331_TT/-/T chr12:115872331-115872332 - ENSMUSG00000096326.2 ENSMUST00000199373.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3104;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115872331_TT/-/T chr12:115872331-115872332 T ENSMUSG00000096326.2 ENSMUST00000199373.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3104;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115936510_C/T chr12:115936510 T ENSMUSG00000106041.1 ENSMUST00000197024.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1606;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115936510_C/T chr12:115936510 T ENSMUSG00000106434.1 ENSMUST00000199231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3019;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_115989168_G/A chr12:115989168 A ENSMUSG00000106239.1 ENSMUST00000199781.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 - ENSMUSG00000021171.8 ENSMUST00000100986.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 TTTT ENSMUSG00000021171.8 ENSMUST00000100986.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 - ENSMUSG00000021171.8 ENSMUST00000220720.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 TTTT ENSMUSG00000021171.8 ENSMUST00000220720.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 - ENSMUSG00000021171.8 ENSMUST00000220816.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 TTTT ENSMUSG00000021171.8 ENSMUST00000220816.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 - ENSMUSG00000021171.8 ENSMUST00000223150.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 TTTT ENSMUSG00000021171.8 ENSMUST00000223150.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 - ENSMUSG00000021171.8 ENSMUST00000223181.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116354465_TTTTT/-/TTTT chr12:116354465-116354469 TTTT ENSMUSG00000021171.8 ENSMUST00000223181.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116726531_T/A chr12:116726531 A ENSMUSG00000056553.14 ENSMUST00000070733.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116726531_T/A chr12:116726531 A ENSMUSG00000056553.14 ENSMUST00000185505.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116726531_T/A chr12:116726531 A ENSMUSG00000056553.14 ENSMUST00000189009.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116726531_T/A chr12:116726531 A ENSMUSG00000056553.14 ENSMUST00000190247.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116726531_T/A chr12:116726531 A ENSMUSG00000056553.14 ENSMUST00000191106.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116889963_TTTG/- chr12:116889963-116889966 - ENSMUSG00000056553.14 ENSMUST00000070733.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116889963_TTTG/- chr12:116889963-116889966 - ENSMUSG00000056553.14 ENSMUST00000189009.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_116889963_TTTG/- chr12:116889963-116889966 - ENSMUSG00000056553.14 ENSMUST00000190247.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_117888135_TT/-/T chr12:117888135-117888136 - ENSMUSG00000018581.15 ENSMUST00000084806.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_117888135_TT/-/T chr12:117888135-117888136 T ENSMUSG00000018581.15 ENSMUST00000084806.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_117888135_TT/-/T chr12:117888135-117888136 - ENSMUSG00000018581.15 ENSMUST00000176756.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_117888135_TT/-/T chr12:117888135-117888136 T ENSMUSG00000018581.15 ENSMUST00000176756.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_118388375_A/T chr12:118388375 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_118811011_-/AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA chr12:118811010-118811011 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_119011807_A/C chr12:119011807 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr12_119317274_TTCT/- chr12:119317274-119317277 - ENSMUSG00000041886.7 ENSMUST00000222784.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr12_119746649_TT/- chr12:119746649-119746650 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_3228674_TT/-/TTT chr13:3228674-3228675 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_3228674_TT/-/TTT chr13:3228674-3228675 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_3435576_AT/- chr13:3435576-3435577 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_3740715_T/A chr13:3740715 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_3980063_-/ATCT chr13:3980062-3980063 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_5080606_A/C chr13:5080606 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_5151276_TTT/-/TT chr13:5151276-5151278 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_5151276_TTT/-/TT chr13:5151276-5151278 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_5246967_G/A chr13:5246967 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_5246970_G/T chr13:5246970 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_5461899_G/A chr13:5461899 A ENSMUSG00000114098.1 ENSMUST00000220493.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_5461899_G/A chr13:5461899 A ENSMUSG00000114098.1 ENSMUST00000220659.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_5461899_G/A chr13:5461899 A ENSMUSG00000114098.1 ENSMUST00000223343.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_5712586_T/C chr13:5712586 C ENSMUSG00000114053.1 ENSMUST00000222871.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_5712586_T/C chr13:5712586 C ENSMUSG00000114053.1 ENSMUST00000223254.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_5712592_T/C chr13:5712592 C ENSMUSG00000114053.1 ENSMUST00000222871.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_5712592_T/C chr13:5712592 C ENSMUSG00000114053.1 ENSMUST00000223254.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_6435775_T/G chr13:6435775 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_7649741_-/AA chr13:7649740-7649741 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_8000466_AA/- chr13:8000466-8000467 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_8023896_A/G chr13:8023896 G ENSMUSG00000113508.1 ENSMUST00000165220.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8344758_CACA/- chr13:8344758-8344761 - ENSMUSG00000052551.16 ENSMUST00000064473.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8344758_CACA/- chr13:8344758-8344761 - ENSMUSG00000052551.16 ENSMUST00000123187.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8344758_CACA/- chr13:8344758-8344761 - ENSMUSG00000052551.16 ENSMUST00000135574.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8344758_CACA/- chr13:8344758-8344761 - ENSMUSG00000052551.16 ENSMUST00000139438.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3888;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8407462_GTGT/- chr13:8407462-8407465 - ENSMUSG00000052551.16 ENSMUST00000064473.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8407462_GTGT/- chr13:8407462-8407465 - ENSMUSG00000052551.16 ENSMUST00000123187.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8407462_GTGT/- chr13:8407462-8407465 - ENSMUSG00000052551.16 ENSMUST00000135574.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8595083_TCTC/-/TC chr13:8595083-8595086 - ENSMUSG00000052551.16 ENSMUST00000064473.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8595083_TCTC/-/TC chr13:8595083-8595086 TC ENSMUSG00000052551.16 ENSMUST00000064473.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8595083_TCTC/-/TC chr13:8595083-8595086 - ENSMUSG00000052551.16 ENSMUST00000123187.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8595083_TCTC/-/TC chr13:8595083-8595086 TC ENSMUSG00000052551.16 ENSMUST00000123187.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8595083_TCTC/-/TC chr13:8595083-8595086 - ENSMUSG00000052551.16 ENSMUST00000135574.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_8595083_TCTC/-/TC chr13:8595083-8595086 TC ENSMUSG00000052551.16 ENSMUST00000135574.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_9067434_ACAC/-/AC chr13:9067434-9067437 - ENSMUSG00000113543.1 ENSMUST00000221672.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_9067434_ACAC/-/AC chr13:9067434-9067437 AC ENSMUSG00000113543.1 ENSMUST00000221672.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_9067434_ACAC/-/AC chr13:9067434-9067437 - ENSMUSG00000113543.1 ENSMUST00000221989.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_9067434_ACAC/-/AC chr13:9067434-9067437 AC ENSMUSG00000113543.1 ENSMUST00000221989.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_9236211_-/AA chr13:9236210-9236211 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_9863999_C/A chr13:9863999 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_10187146_G/A chr13:10187146 A ENSMUSG00000046159.16 ENSMUST00000187510.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10187146_G/A chr13:10187146 A ENSMUSG00000046159.16 ENSMUST00000223242.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10597960_AGAG/- chr13:10597960-10597963 - ENSMUSG00000097009.2 ENSMUST00000180807.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10597960_AGAG/- chr13:10597960-10597963 - ENSMUSG00000097009.2 ENSMUST00000221649.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10597960_AGAG/- chr13:10597960-10597963 - ENSMUSG00000097009.2 ENSMUST00000222066.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10597960_AGAG/- chr13:10597960-10597963 - ENSMUSG00000097009.2 ENSMUST00000222633.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10597960_AGAG/- chr13:10597960-10597963 - ENSMUSG00000097009.2 ENSMUST00000223253.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10699231_TATCTATC/- chr13:10699231-10699238 - ENSMUSG00000097009.2 ENSMUST00000220536.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10699231_TATCTATC/- chr13:10699231-10699238 - ENSMUSG00000114134.1 ENSMUST00000221855.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=923;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_10699231_TATCTATC/- chr13:10699231-10699238 - ENSMUSG00000097009.2 ENSMUST00000222633.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 - ENSMUSG00000021313.16 ENSMUST00000021750.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 AG ENSMUSG00000021313.16 ENSMUST00000021750.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 - ENSMUSG00000021313.16 ENSMUST00000170156.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 AG ENSMUSG00000021313.16 ENSMUST00000170156.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 - ENSMUSG00000021313.16 ENSMUST00000220597.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 AG ENSMUSG00000021313.16 ENSMUST00000220597.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 - ENSMUSG00000021313.16 ENSMUST00000221341.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_11951562_AGAG/-/AG chr13:11951562-11951565 AG ENSMUSG00000021313.16 ENSMUST00000221341.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_12625443_A/C chr13:12625443 C ENSMUSG00000097715.2 ENSMUST00000181570.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_12625443_A/C chr13:12625443 C ENSMUSG00000097715.2 ENSMUST00000220647.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_12625443_A/C chr13:12625443 C ENSMUSG00000097715.2 ENSMUST00000220758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_12625443_A/C chr13:12625443 C ENSMUSG00000097715.2 ENSMUST00000221825.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_12625443_A/C chr13:12625443 C ENSMUSG00000097715.2 ENSMUST00000222019.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1473;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_12625443_A/C chr13:12625443 C ENSMUSG00000097715.2 ENSMUST00000222447.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_12714834_TGTG/-/TG chr13:12714834-12714837 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_12714834_TGTG/-/TG chr13:12714834-12714837 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_13487573_TT/- chr13:13487573-13487574 - ENSMUSG00000005397.8 ENSMUST00000005532.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13487573_TT/- chr13:13487573-13487574 - ENSMUSG00000005397.8 ENSMUST00000222142.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13584012_TTT/- chr13:13584012-13584014 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_13645830_A/T chr13:13645830 T ENSMUSG00000019726.12 ENSMUST00000110559.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13645830_A/T chr13:13645830 T ENSMUSG00000019726.12 ENSMUST00000220937.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13645830_A/T chr13:13645830 T ENSMUSG00000019726.12 ENSMUST00000223527.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2244;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13805895_GA/TC chr13:13805895-13805896 TC ENSMUSG00000021303.14 ENSMUST00000021734.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13805895_GA/TC chr13:13805895-13805896 TC ENSMUSG00000021303.14 ENSMUST00000138783.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13806711_ACACAC/- chr13:13806711-13806716 - ENSMUSG00000021303.14 ENSMUST00000021734.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_13806711_ACACAC/- chr13:13806711-13806716 - ENSMUSG00000021303.14 ENSMUST00000138783.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=598;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_14406938_CACA/- chr13:14406938-14406941 - ENSMUSG00000021301.9 ENSMUST00000110516.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_14406938_CACA/- chr13:14406938-14406941 - ENSMUSG00000021301.9 ENSMUST00000221274.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_14406938_CACA/- chr13:14406938-14406941 - ENSMUSG00000021301.9 ENSMUST00000221863.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_14406938_CACA/- chr13:14406938-14406941 - ENSMUSG00000021301.9 ENSMUST00000222904.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_14406938_CACA/- chr13:14406938-14406941 - ENSMUSG00000021301.9 ENSMUST00000223189.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_14406938_CACA/- chr13:14406938-14406941 - ENSMUSG00000021301.9 ENSMUST00000223317.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_14406938_CACA/- chr13:14406938-14406941 - ENSMUSG00000021301.9 ENSMUST00000223550.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_15128016_TGTG/- chr13:15128016-15128019 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_15310039_AGAT/- chr13:15310039-15310042 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_16220997_-/AGAAA chr13:16220996-16220997 AGAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_16513529_AA/- chr13:16513529-16513530 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_17602047_-/GATAGATA chr13:17602046-17602047 GATAGATA ENSMUSG00000055137.7 ENSMUST00000068545.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_17817643_T/C chr13:17817643 C ENSMUSG00000081285.2 ENSMUST00000118792.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3303;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_18125920_TT/- chr13:18125920-18125921 - ENSMUSG00000009734.18 ENSMUST00000139064.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_18125920_TT/- chr13:18125920-18125921 - ENSMUSG00000009734.18 ENSMUST00000175703.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_18125920_TT/- chr13:18125920-18125921 - ENSMUSG00000009734.18 ENSMUST00000176795.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_18583266_T/- chr13:18583266 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_18614612_-/AC chr13:18614611-18614612 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_18808756_-/TG chr13:18808755-18808756 TG ENSMUSG00000041236.8 ENSMUST00000072961.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_18808756_-/TG chr13:18808755-18808756 TG ENSMUSG00000041236.8 ENSMUST00000222813.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_18934266_G/T chr13:18934266 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_19434821_TT/- chr13:19434821-19434822 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_19578626_T/C chr13:19578626 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_19629629_CACA/-/CA chr13:19629629-19629632 - ENSMUSG00000021319.7 ENSMUST00000002883.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19629629_CACA/-/CA chr13:19629629-19629632 CA ENSMUSG00000021319.7 ENSMUST00000002883.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19629629_CACA/-/CA chr13:19629629-19629632 - ENSMUSG00000021319.7 ENSMUST00000221810.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19629629_CACA/-/CA chr13:19629629-19629632 CA ENSMUSG00000021319.7 ENSMUST00000221810.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19629629_CACA/-/CA chr13:19629629-19629632 - ENSMUSG00000021319.7 ENSMUST00000222464.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19629629_CACA/-/CA chr13:19629629-19629632 CA ENSMUSG00000021319.7 ENSMUST00000222464.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19629629_CACA/-/CA chr13:19629629-19629632 - ENSMUSG00000021319.7 ENSMUST00000222992.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19629629_CACA/-/CA chr13:19629629-19629632 CA ENSMUSG00000021319.7 ENSMUST00000222992.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19728265_T/G chr13:19728265 G ENSMUSG00000047462.9 ENSMUST00000151029.2 Transcript non_coding_transcript_exon_variant 1925 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19824715_TGTG/- chr13:19824715-19824718 - ENSMUSG00000053101.3 ENSMUST00000065335.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19824715_TGTG/- chr13:19824715-19824718 - ENSMUSG00000053101.3 ENSMUST00000221268.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19824715_TGTG/- chr13:19824715-19824718 - ENSMUSG00000053101.3 ENSMUST00000222664.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=488;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19824715_TGTG/- chr13:19824715-19824718 - ENSMUSG00000053101.3 ENSMUST00000222772.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_19824715_TGTG/- chr13:19824715-19824718 - ENSMUSG00000113542.1 ENSMUST00000223330.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3037;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20136324_TGTGTG/-/TGTG chr13:20136324-20136329 - ENSMUSG00000041112.17 ENSMUST00000072519.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20136324_TGTGTG/-/TGTG chr13:20136324-20136329 TGTG ENSMUSG00000041112.17 ENSMUST00000072519.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20136324_TGTGTG/-/TGTG chr13:20136324-20136329 - ENSMUSG00000041112.17 ENSMUST00000180626.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20136324_TGTGTG/-/TGTG chr13:20136324-20136329 TGTG ENSMUSG00000041112.17 ENSMUST00000180626.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20136324_TGTGTG/-/TGTG chr13:20136324-20136329 - ENSMUSG00000041112.17 ENSMUST00000181429.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20136324_TGTGTG/-/TGTG chr13:20136324-20136329 TGTG ENSMUSG00000041112.17 ENSMUST00000181429.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20397976_AA/- chr13:20397976-20397977 - ENSMUSG00000041112.17 ENSMUST00000072519.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20676812_T/C chr13:20676812 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_20839035_-/T chr13:20839034-20839035 T ENSMUSG00000021322.8 ENSMUST00000021757.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_20839035_-/T chr13:20839034-20839035 T ENSMUSG00000021322.8 ENSMUST00000221982.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_22724955_C/G chr13:22724955 G ENSMUSG00000084136.3 ENSMUST00000119931.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=691;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23156213_-/GAAA chr13:23156212-23156213 GAAA ENSMUSG00000061376.2 ENSMUST00000226845.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3099;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23156213_-/GAAA chr13:23156212-23156213 GAAA ENSMUSG00000061376.2 ENSMUST00000227388.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3099;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23156213_-/GAAA chr13:23156212-23156213 GAAA ENSMUSG00000061376.2 ENSMUST00000228113.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4393;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23156213_-/GAAA chr13:23156212-23156213 GAAA ENSMUSG00000061376.2 ENSMUST00000228666.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3099;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23245474_-/CA chr13:23245473-23245474 CA ENSMUSG00000069280.1 ENSMUST00000091719.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3764;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23564687_TT/- chr13:23564687-23564688 - ENSMUSG00000052565.7 ENSMUST00000045301.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4001;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23564687_TT/- chr13:23564687-23564688 - ENSMUSG00000069273.2 ENSMUST00000105107.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2318;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23763069_T/A chr13:23763069 A ENSMUSG00000049539.3 ENSMUST00000055770.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=597;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23763069_T/A chr13:23763069 A ENSMUSG00000069265.2 ENSMUST00000091701.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=683;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_23763069_T/A chr13:23763069 A ENSMUSG00000060093.6 ENSMUST00000102964.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1839;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 A ENSMUSG00000021338.17 ENSMUST00000072889.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 GTG ENSMUSG00000021338.17 ENSMUST00000072889.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 A ENSMUSG00000021338.17 ENSMUST00000110398.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 GTG ENSMUSG00000021338.17 ENSMUST00000110398.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 A ENSMUSG00000021338.17 ENSMUST00000125901.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 GTG ENSMUSG00000021338.17 ENSMUST00000125901.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 A ENSMUSG00000021338.17 ENSMUST00000142171.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=264;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 GTG ENSMUSG00000021338.17 ENSMUST00000142171.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=264;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 A ENSMUSG00000021338.17 ENSMUST00000147261.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3961;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24063280_ATG/A/GTG chr13:24063280-24063282 GTG ENSMUSG00000021338.17 ENSMUST00000147261.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3961;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24256525_C/T chr13:24256525 T ENSMUSG00000021338.17 ENSMUST00000072889.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24256525_C/T chr13:24256525 T ENSMUSG00000021338.17 ENSMUST00000110398.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24256525_C/T chr13:24256525 T ENSMUSG00000021338.17 ENSMUST00000125420.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24256525_C/T chr13:24256525 T ENSMUSG00000021338.17 ENSMUST00000140042.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000038477.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000058009.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000091694.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000110383.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000110384.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000132689.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000134370.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000138547.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24656660_AA/- chr13:24656660-24656661 - ENSMUSG00000036006.19 ENSMUST00000177298.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000038477.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000058009.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000091694.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000110383.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000110384.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000132689.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000134370.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000138547.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000176303.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3624;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_24669315_G/C chr13:24669315 C ENSMUSG00000036006.19 ENSMUST00000177298.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_25156331_G/T chr13:25156331 T ENSMUSG00000035910.15 ENSMUST00000069614.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_25542959_A/T chr13:25542959 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_26032415_-/GAGAGAGA chr13:26032414-26032415 GAGAGAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_26355692_-/TA chr13:26355691-26355692 TA ENSMUSG00000114660.1 ENSMUST00000223914.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3262;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_26768776_AA/-/A chr13:26768776-26768777 - ENSMUSG00000045835.5 ENSMUST00000055915.5 Transcript 3_prime_UTR_variant 1389-1390 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_26768776_AA/-/A chr13:26768776-26768777 A ENSMUSG00000045835.5 ENSMUST00000055915.5 Transcript 3_prime_UTR_variant 1389-1390 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_26768776_AA/-/A chr13:26768776-26768777 - ENSMUSG00000114342.1 ENSMUST00000224024.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=616;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_26768776_AA/-/A chr13:26768776-26768777 A ENSMUSG00000114342.1 ENSMUST00000224024.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=616;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_27035132_GAGAGA/-/GAGA chr13:27035132-27035137 - ENSMUSG00000114646.1 ENSMUST00000223686.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_27035132_GAGAGA/-/GAGA chr13:27035132-27035137 GAGA ENSMUSG00000114646.1 ENSMUST00000223686.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28348619_AA/-/A chr13:28348619-28348620 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_28348619_AA/-/A chr13:28348619-28348620 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_28791390_CACA/-/CACACACA chr13:28791390-28791393 - ENSMUSG00000085936.7 ENSMUST00000125358.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28791390_CACA/-/CACACACA chr13:28791390-28791393 CACACACA ENSMUSG00000085936.7 ENSMUST00000125358.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28791390_CACA/-/CACACACA chr13:28791390-28791393 - ENSMUSG00000085936.7 ENSMUST00000134624.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28791390_CACA/-/CACACACA chr13:28791390-28791393 CACACACA ENSMUSG00000085936.7 ENSMUST00000134624.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28791390_CACA/-/CACACACA chr13:28791390-28791393 - ENSMUSG00000085936.7 ENSMUST00000148885.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28791390_CACA/-/CACACACA chr13:28791390-28791393 CACACACA ENSMUSG00000085936.7 ENSMUST00000148885.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 C ENSMUSG00000085936.7 ENSMUST00000125358.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 GTG ENSMUSG00000085936.7 ENSMUST00000125358.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 CTGTGTG ENSMUSG00000085936.7 ENSMUST00000125358.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 C ENSMUSG00000085936.7 ENSMUST00000134624.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 GTG ENSMUSG00000085936.7 ENSMUST00000134624.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 CTGTGTG ENSMUSG00000085936.7 ENSMUST00000134624.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 C ENSMUSG00000085936.7 ENSMUST00000148885.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 GTG ENSMUSG00000085936.7 ENSMUST00000148885.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_28847066_CTG/C/GTG/CTGTGTG chr13:28847066-28847068 CTGTGTG ENSMUSG00000085936.7 ENSMUST00000148885.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_29255619_A/G chr13:29255619 G ENSMUSG00000006191.17 ENSMUST00000140278.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_30211897_-/TCTT chr13:30211896-30211897 TCTT ENSMUSG00000038732.15 ENSMUST00000047311.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_30211897_-/TCTT chr13:30211896-30211897 TCTT ENSMUSG00000038732.15 ENSMUST00000152798.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_30211897_-/TCTT chr13:30211896-30211897 TCTT ENSMUSG00000038732.15 ENSMUST00000220870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_30216761_-/T chr13:30216760-30216761 T ENSMUSG00000038732.15 ENSMUST00000047311.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_30216761_-/T chr13:30216760-30216761 T ENSMUSG00000038732.15 ENSMUST00000152798.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_30216761_-/T chr13:30216760-30216761 T ENSMUSG00000038732.15 ENSMUST00000220870.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_30267152_-/TC chr13:30267151-30267152 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_30607824_CACA/- chr13:30607824-30607827 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_31563800_-/AGAG chr13:31563799-31563800 AGAG ENSMUSG00000038415.10 ENSMUST00000042118.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2823;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_31563800_-/AGAG chr13:31563799-31563800 AGAG ENSMUSG00000038408.14 ENSMUST00000126138.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3597;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_31563800_-/AGAG chr13:31563799-31563800 AGAG ENSMUSG00000087220.1 ENSMUST00000131539.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=949;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_31563800_-/AGAG chr13:31563799-31563800 AGAG ENSMUSG00000038408.14 ENSMUST00000150418.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1692;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_31563800_-/AGAG chr13:31563799-31563800 AGAG ENSMUSG00000090863.1 ENSMUST00000170573.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4466;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_32394979_TGTG/- chr13:32394979-32394982 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_33250891_TCTC/- chr13:33250891-33250894 - ENSMUSG00000062342.3 ENSMUST00000071873.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_34308639_AAAA/- chr13:34308639-34308642 - ENSMUSG00000038267.15 ENSMUST00000040336.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_34308639_AAAA/- chr13:34308639-34308642 - ENSMUSG00000038267.15 ENSMUST00000143353.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_34308639_AAAA/- chr13:34308639-34308642 - ENSMUSG00000038267.15 ENSMUST00000145038.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_34308639_AAAA/- chr13:34308639-34308642 - ENSMUSG00000038267.15 ENSMUST00000148390.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_35763809_A/T chr13:35763809 T ENSMUSG00000059288.14 ENSMUST00000075220.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_35763809_A/T chr13:35763809 T ENSMUSG00000059288.14 ENSMUST00000163595.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_35763809_A/T chr13:35763809 T ENSMUSG00000059288.14 ENSMUST00000225602.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_35763809_A/T chr13:35763809 T ENSMUSG00000059288.14 ENSMUST00000226071.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_36551030_AGAG/- chr13:36551030-36551033 - ENSMUSG00000021420.13 ENSMUST00000224916.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_36700730_AGAGAG/-/AGAG chr13:36700730-36700735 - ENSMUSG00000021420.13 ENSMUST00000224916.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_36700730_AGAGAG/-/AGAG chr13:36700730-36700735 AGAG ENSMUSG00000021420.13 ENSMUST00000224916.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_37280091_TGTG/- chr13:37280091-37280094 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_37712625_ACAC/-/AC chr13:37712625-37712628 - ENSMUSG00000114732.1 ENSMUST00000224732.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_37712625_ACAC/-/AC chr13:37712625-37712628 AC ENSMUSG00000114732.1 ENSMUST00000224732.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_37712625_ACAC/-/AC chr13:37712625-37712628 - ENSMUSG00000114732.1 ENSMUST00000225448.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_37712625_ACAC/-/AC chr13:37712625-37712628 AC ENSMUSG00000114732.1 ENSMUST00000225448.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_38016058_TGTG/- chr13:38016058-38016061 - ENSMUSG00000044566.15 ENSMUST00000074969.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_38016058_TGTG/- chr13:38016058-38016061 - ENSMUSG00000044566.15 ENSMUST00000089840.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4850;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_38016058_TGTG/- chr13:38016058-38016061 - ENSMUSG00000044566.15 ENSMUST00000110233.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_38093967_ACAC/-/AC chr13:38093967-38093970 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_38093967_ACAC/-/AC chr13:38093967-38093970 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_38250713_GTTGCCT/- chr13:38250713-38250719 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_38387033_AA/- chr13:38387033-38387034 - ENSMUSG00000039004.6 ENSMUST00000171970.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_38589527_AAA/- chr13:38589527-38589529 - ENSMUSG00000038982.10 ENSMUST00000224115.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3313;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_39545120_T/C chr13:39545120 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_39582200_T/A chr13:39582200 A ENSMUSG00000114841.1 ENSMUST00000225217.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_40037951_C/A chr13:40037951 A ENSMUSG00000047094.9 ENSMUST00000054635.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_40037951_C/A chr13:40037951 A ENSMUSG00000047094.9 ENSMUST00000224909.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_40548885_TCCTC/- chr13:40548885-40548889 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_40656865_TT/-/TTT chr13:40656865-40656866 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_40656865_TT/-/TTT chr13:40656865-40656866 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_40747700_TGTG/- chr13:40747700-40747703 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_40761533_AA/- chr13:40761533-40761534 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_40856186_TTT/-/TT chr13:40856186-40856188 - ENSMUSG00000021360.16 ENSMUST00000110191.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3566;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_40856186_TTT/-/TT chr13:40856186-40856188 TT ENSMUSG00000021360.16 ENSMUST00000110191.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3566;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41193058_ACAC/-/AC chr13:41193058-41193061 - ENSMUSG00000021364.16 ENSMUST00000021793.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41193058_ACAC/-/AC chr13:41193058-41193061 AC ENSMUSG00000021364.16 ENSMUST00000021793.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41193058_ACAC/-/AC chr13:41193058-41193061 - ENSMUSG00000021364.16 ENSMUST00000117096.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41193058_ACAC/-/AC chr13:41193058-41193061 AC ENSMUSG00000021364.16 ENSMUST00000117096.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41267010_GTGT/-/GT chr13:41267010-41267013 - ENSMUSG00000091264.3 ENSMUST00000165561.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41267010_GTGT/-/GT chr13:41267010-41267013 GT ENSMUSG00000091264.3 ENSMUST00000165561.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41880958_TCTC/- chr13:41880958-41880961 - ENSMUSG00000113856.1 ENSMUST00000221085.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_41880958_TCTC/- chr13:41880958-41880961 - ENSMUSG00000113856.1 ENSMUST00000221285.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_42023794_G/A chr13:42023794 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_42079553_TT/- chr13:42079553-42079554 - ENSMUSG00000021366.8 ENSMUST00000060148.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_42079553_TT/- chr13:42079553-42079554 - ENSMUSG00000021366.8 ENSMUST00000220525.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_42191827_AGAG/- chr13:42191827-42191830 - ENSMUSG00000021366.8 ENSMUST00000220801.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43040166_C/G chr13:43040166 G ENSMUSG00000054728.16 ENSMUST00000066928.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43040166_C/G chr13:43040166 G ENSMUSG00000054728.16 ENSMUST00000110161.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43040166_C/G chr13:43040166 G ENSMUSG00000054728.16 ENSMUST00000128646.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43040166_C/G chr13:43040166 G ENSMUSG00000054728.16 ENSMUST00000131942.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43040166_C/G chr13:43040166 G ENSMUSG00000054728.16 ENSMUST00000148891.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43040166_C/G chr13:43040166 G ENSMUSG00000054728.16 ENSMUST00000149235.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43083138_CC/- chr13:43083138-43083139 - ENSMUSG00000054728.16 ENSMUST00000066928.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43083138_CC/- chr13:43083138-43083139 - ENSMUSG00000054728.16 ENSMUST00000110161.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43083138_CC/- chr13:43083138-43083139 - ENSMUSG00000054728.16 ENSMUST00000128646.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43083138_CC/- chr13:43083138-43083139 - ENSMUSG00000054728.16 ENSMUST00000131942.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43083138_CC/- chr13:43083138-43083139 - ENSMUSG00000054728.16 ENSMUST00000148891.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43083138_CC/- chr13:43083138-43083139 - ENSMUSG00000054728.16 ENSMUST00000149235.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_43933256_GT/- chr13:43933256-43933257 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_44319421_AA/- chr13:44319421-44319422 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_44332748_GG/- chr13:44332748-44332749 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_44465101_CACA/-/CA chr13:44465101-44465104 - ENSMUSG00000098144.8 ENSMUST00000220639.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44465101_CACA/-/CA chr13:44465101-44465104 CA ENSMUSG00000098144.8 ENSMUST00000220639.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000044608.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000172581.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000172708.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000172830.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000172924.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000172977.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000173246.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000173367.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000173704.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000174068.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000174086.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000174557.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44749048_TTT/- chr13:44749048-44749050 - ENSMUSG00000038518.15 ENSMUST00000174683.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000072329.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000072329.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000110128.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000110128.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000220555.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000220555.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000221393.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000221393.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000221413.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000221413.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000222321.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000222321.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000222583.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000222583.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000222990.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000222990.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 - ENSMUSG00000057531.14 ENSMUST00000223265.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4309;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_44942434_CACA/-/CA chr13:44942434-44942437 CA ENSMUSG00000057531.14 ENSMUST00000223265.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4309;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_45033244_CACA/-/CA chr13:45033244-45033247 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_45033244_CACA/-/CA chr13:45033244-45033247 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_45076830_T/C chr13:45076830 C ENSMUSG00000047061.6 ENSMUST00000054395.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1862;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_45076830_T/C chr13:45076830 C ENSMUSG00000078915.2 ENSMUST00000109187.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1668;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_46032829_CACA/- chr13:46032829-46032832 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_46097591_TATA/-/TATATATATA chr13:46097591-46097594 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_46097591_TATA/-/TATATATATA chr13:46097591-46097594 TATATATATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_47210819_TT/- chr13:47210819-47210820 - ENSMUSG00000038068.15 ENSMUST00000068891.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_47210819_TT/- chr13:47210819-47210820 - ENSMUSG00000038068.15 ENSMUST00000110111.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_47952027_GATA/- chr13:47952027-47952030 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_48343793_G/A chr13:48343793 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_49663104_-/AAAAAAAAAAAAAAAAAA chr13:49663103-49663104 AAAAAAAAAAAAAAAAAA ENSMUSG00000021392.8 ENSMUST00000021824.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_49663104_-/AAAAAAAAAAAAAAAAAA chr13:49663103-49663104 AAAAAAAAAAAAAAAAAA ENSMUSG00000021392.8 ENSMUST00000221083.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1956;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_49663104_-/AAAAAAAAAAAAAAAAAA chr13:49663103-49663104 AAAAAAAAAAAAAAAAAA ENSMUSG00000021392.8 ENSMUST00000221142.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_49663104_-/AAAAAAAAAAAAAAAAAA chr13:49663103-49663104 AAAAAAAAAAAAAAAAAA ENSMUSG00000021392.8 ENSMUST00000222197.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_49663104_-/AAAAAAAAAAAAAAAAAA chr13:49663103-49663104 AAAAAAAAAAAAAAAAAA ENSMUSG00000021392.8 ENSMUST00000222333.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4308;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_49663104_-/AAAAAAAAAAAAAAAAAA chr13:49663103-49663104 AAAAAAAAAAAAAAAAAA ENSMUSG00000021392.8 ENSMUST00000223346.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3413;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_49663104_-/AAAAAAAAAAAAAAAAAA chr13:49663103-49663104 AAAAAAAAAAAAAAAAAA ENSMUSG00000021392.8 ENSMUST00000223467.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_49827858_G/A chr13:49827858 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_49835539_T/C chr13:49835539 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_49905027_G/A chr13:49905027 A ENSMUSG00000093976.2 ENSMUST00000179367.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=430;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_50286651_TGTG/-/TG chr13:50286651-50286654 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_50286651_TGTG/-/TG chr13:50286651-50286654 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_51279122_-/TC chr13:51279121-51279122 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_51342772_GTGT/- chr13:51342772-51342775 - ENSMUSG00000113426.1 ENSMUST00000221253.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3065;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_51342772_GTGT/- chr13:51342772-51342775 - ENSMUSG00000113162.1 ENSMUST00000222986.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_51402692_CACA/-/CA chr13:51402692-51402695 - ENSMUSG00000112959.1 ENSMUST00000220470.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_51402692_CACA/-/CA chr13:51402692-51402695 CA ENSMUSG00000112959.1 ENSMUST00000220470.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_51402692_CACA/-/CA chr13:51402692-51402695 - ENSMUSG00000112959.1 ENSMUST00000222417.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_51402692_CACA/-/CA chr13:51402692-51402695 CA ENSMUSG00000112959.1 ENSMUST00000222417.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_51576979_-/ATATT chr13:51576978-51576979 ATATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52043407_AA/-/AAA chr13:52043407-52043408 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52043407_AA/-/AAA chr13:52043407-52043408 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52068638_AA/- chr13:52068638-52068639 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52167832_TATATA/-/TATA chr13:52167832-52167837 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52167832_TATATA/-/TATA chr13:52167832-52167837 TATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52254776_ATATAT/-/ATATATAT chr13:52254776-52254781 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52254776_ATATAT/-/ATATATAT chr13:52254776-52254781 ATATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_52421604_TCTC/- chr13:52421604-52421607 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_53037683_TGTG/- chr13:53037683-53037686 - ENSMUSG00000112952.1 ENSMUST00000222184.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2593;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_53143942_TGTG/- chr13:53143942-53143945 - ENSMUSG00000021464.14 ENSMUST00000021918.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_53143942_TGTG/- chr13:53143942-53143945 - ENSMUSG00000021464.14 ENSMUST00000130235.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_53143942_TGTG/- chr13:53143942-53143945 - ENSMUSG00000021464.14 ENSMUST00000149299.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_53465945_TTTTT/- chr13:53465945-53465949 - ENSMUSG00000021469.9 ENSMUST00000021922.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=935;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_53795026_CG/- chr13:53795026-53795027 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_54007411_-/C chr13:54007410-54007411 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_54151826_TATA/-/TA chr13:54151826-54151829 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_54151826_TATA/-/TA chr13:54151826-54151829 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 - ENSMUSG00000021488.8 ENSMUST00000099490.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 GT ENSMUSG00000021488.8 ENSMUST00000099490.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 GTGTGT ENSMUSG00000021488.8 ENSMUST00000099490.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 - ENSMUSG00000114359.1 ENSMUST00000224833.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 GT ENSMUSG00000114359.1 ENSMUST00000224833.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 GTGTGT ENSMUSG00000114359.1 ENSMUST00000224833.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 - ENSMUSG00000021488.8 ENSMUST00000224973.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 GT ENSMUSG00000021488.8 ENSMUST00000224973.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55250049_GTGT/-/GT/GTGTGT chr13:55250049-55250052 GTGTGT ENSMUSG00000021488.8 ENSMUST00000224973.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 - ENSMUSG00000021500.17 ENSMUST00000099479.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 T ENSMUSG00000021500.17 ENSMUST00000099479.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 TTT ENSMUSG00000021500.17 ENSMUST00000099479.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 - ENSMUSG00000021500.17 ENSMUST00000172272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 T ENSMUSG00000021500.17 ENSMUST00000172272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 TTT ENSMUSG00000021500.17 ENSMUST00000172272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 - ENSMUSG00000021500.17 ENSMUST00000223736.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 T ENSMUSG00000021500.17 ENSMUST00000223736.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 TTT ENSMUSG00000021500.17 ENSMUST00000223736.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 - ENSMUSG00000021500.17 ENSMUST00000224551.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 T ENSMUSG00000021500.17 ENSMUST00000224551.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55640765_TT/-/T/TTT chr13:55640765-55640766 TTT ENSMUSG00000021500.17 ENSMUST00000224551.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55672341_TT/- chr13:55672341-55672342 - ENSMUSG00000021500.17 ENSMUST00000099479.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55672341_TT/- chr13:55672341-55672342 - ENSMUSG00000021500.17 ENSMUST00000172272.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55672341_TT/- chr13:55672341-55672342 - ENSMUSG00000021500.17 ENSMUST00000223736.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55672341_TT/- chr13:55672341-55672342 - ENSMUSG00000021500.17 ENSMUST00000224551.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2491;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_55672341_TT/- chr13:55672341-55672342 - ENSMUSG00000021500.17 ENSMUST00000231097.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56045463_TT/-/T chr13:56045463-56045464 - ENSMUSG00000114493.1 ENSMUST00000225993.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56045463_TT/-/T chr13:56045463-56045464 T ENSMUSG00000114493.1 ENSMUST00000225993.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 - ENSMUSG00000015937.15 ENSMUST00000016081.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3942;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 CACA ENSMUSG00000015937.15 ENSMUST00000016081.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3942;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 - ENSMUSG00000015937.15 ENSMUST00000045788.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3945;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 CACA ENSMUSG00000015937.15 ENSMUST00000045788.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3945;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 - ENSMUSG00000015937.15 ENSMUST00000137835.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4489;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 CACA ENSMUSG00000015937.15 ENSMUST00000137835.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4489;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 - ENSMUSG00000015937.15 ENSMUST00000141589.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4682;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 CACA ENSMUSG00000015937.15 ENSMUST00000141589.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4682;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 - ENSMUSG00000114493.1 ENSMUST00000225993.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56069672_CACACA/-/CACA chr13:56069672-56069677 CACA ENSMUSG00000114493.1 ENSMUST00000225993.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56623875_AAGAAG/- chr13:56623875-56623880 - ENSMUSG00000035493.10 ENSMUST00000045173.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56623875_AAGAAG/- chr13:56623875-56623880 - ENSMUSG00000035493.10 ENSMUST00000225300.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2222;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56623875_AAGAAG/- chr13:56623875-56623880 - ENSMUSG00000035493.10 ENSMUST00000225600.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56743151_TTTT/- chr13:56743151-56743154 - ENSMUSG00000021540.16 ENSMUST00000069557.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=774;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56743151_TTTT/- chr13:56743151-56743154 - ENSMUSG00000021540.16 ENSMUST00000109874.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2847;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56743151_TTTT/- chr13:56743151-56743154 - ENSMUSG00000021540.16 ENSMUST00000109876.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3191;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56743151_TTTT/- chr13:56743151-56743154 - ENSMUSG00000021540.16 ENSMUST00000136702.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4158;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_56759206_-/CCCCCCCCCCCC chr13:56759205-56759206 CCCCCCCCCCCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_57301822_AGAT/- chr13:57301822-57301825 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_57563163_ACAC/- chr13:57563163-57563166 - ENSMUSG00000056222.15 ENSMUST00000172326.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_57563163_ACAC/- chr13:57563163-57563166 - ENSMUSG00000056222.15 ENSMUST00000185502.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_57563163_ACAC/- chr13:57563163-57563166 - ENSMUSG00000056222.15 ENSMUST00000185905.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_57563163_ACAC/- chr13:57563163-57563166 - ENSMUSG00000056222.15 ENSMUST00000186271.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_57563163_ACAC/- chr13:57563163-57563166 - ENSMUSG00000056222.15 ENSMUST00000187852.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_57563163_ACAC/- chr13:57563163-57563166 - ENSMUSG00000056222.15 ENSMUST00000189373.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58728734_-/AC chr13:58728733-58728734 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000079828.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000109838.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000224259.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000224402.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000225488.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000225583.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000225950.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_58835534_TCTC/- chr13:58835534-58835537 - ENSMUSG00000055254.15 ENSMUST00000226021.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=278;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60179560_GTGT/- chr13:60179560-60179563 - ENSMUSG00000052957.8 ENSMUST00000065086.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60179560_GTGT/- chr13:60179560-60179563 - ENSMUSG00000052957.8 ENSMUST00000223933.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2619;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60179560_GTGT/- chr13:60179560-60179563 - ENSMUSG00000114433.1 ENSMUST00000224063.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60179560_GTGT/- chr13:60179560-60179563 - ENSMUSG00000114433.1 ENSMUST00000224630.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60179560_GTGT/- chr13:60179560-60179563 - ENSMUSG00000114433.1 ENSMUST00000225172.1 Transcript non_coding_transcript_exon_variant 2784-2787 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60372091_GAGA/-/GA chr13:60372091-60372094 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_60372091_GAGA/-/GA chr13:60372091-60372094 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_60580693_ATC/A/CTC chr13:60580693-60580695 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_60580693_ATC/A/CTC chr13:60580693-60580695 CTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_60822726_-/CTTTCT chr13:60822725-60822726 CTTTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_60855968_G/C chr13:60855968 C ENSMUSG00000050345.9 ENSMUST00000091569.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60855968_G/C chr13:60855968 C ENSMUSG00000114487.1 ENSMUST00000225382.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60855968_G/C chr13:60855968 C ENSMUSG00000114635.1 ENSMUST00000225690.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60880179_A/G chr13:60880179 G ENSMUSG00000114487.1 ENSMUST00000225382.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_60880179_A/G chr13:60880179 G ENSMUSG00000114635.1 ENSMUST00000225690.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 A ENSMUSG00000021458.17 ENSMUST00000021911.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 CC ENSMUSG00000021458.17 ENSMUST00000021911.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 A ENSMUSG00000021458.17 ENSMUST00000091560.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 CC ENSMUSG00000021458.17 ENSMUST00000091560.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 A ENSMUSG00000021458.17 ENSMUST00000220863.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 CC ENSMUSG00000021458.17 ENSMUST00000220863.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 A ENSMUSG00000021458.17 ENSMUST00000221676.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1689;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63066425_AC/A/CC chr13:63066425-63066426 CC ENSMUSG00000021458.17 ENSMUST00000221676.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1689;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63725535_C/G chr13:63725535 G ENSMUSG00000114071.1 ENSMUST00000222256.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4614;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63725535_C/G chr13:63725535 G ENSMUSG00000113825.1 ENSMUST00000222372.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63888686_C/A chr13:63888686 A ENSMUSG00000021470.18 ENSMUST00000095724.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63888686_C/A chr13:63888686 A ENSMUSG00000021470.18 ENSMUST00000162086.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2695;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_63993553_TGTG/- chr13:63993553-63993556 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000039318.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000039318.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000109769.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000109769.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000109770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000109770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000221139.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000221139.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000221217.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000221217.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000221437.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1253;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000221437.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1253;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000113804.1 ENSMUST00000221567.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3627;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000113804.1 ENSMUST00000221567.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3627;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000221634.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000221634.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000222713.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000222713.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000222766.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000222766.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 - ENSMUSG00000033102.15 ENSMUST00000223116.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64206893_AGAG/-/AG chr13:64206893-64206896 AG ENSMUSG00000033102.15 ENSMUST00000223116.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000033102.15 ENSMUST00000039318.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000033102.15 ENSMUST00000109770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000097101.3 ENSMUST00000181403.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4633;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000097101.3 ENSMUST00000189419.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4633;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000021482.10 ENSMUST00000221118.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2791;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000033102.15 ENSMUST00000221139.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000021482.10 ENSMUST00000221350.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2828;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000021482.10 ENSMUST00000221399.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000033102.15 ENSMUST00000221437.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000033102.15 ENSMUST00000221634.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000097101.3 ENSMUST00000222277.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=929;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64272781_C/A chr13:64272781 A ENSMUSG00000021482.10 ENSMUST00000222286.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2847;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64550141_TGTG/-/TG chr13:64550141-64550144 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_64550141_TGTG/-/TG chr13:64550141-64550144 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_64651642_C/A chr13:64651642 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_64741879_TGTG/- chr13:64741879-64741882 - ENSMUSG00000033063.8 ENSMUST00000091554.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_64973777_A/G chr13:64973777 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_65274994_AA/- chr13:65274994-65274995 - ENSMUSG00000021514.18 ENSMUST00000125510.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3857;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65274994_AA/- chr13:65274994-65274995 - ENSMUSG00000021514.18 ENSMUST00000126879.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3819;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65274994_AA/- chr13:65274994-65274995 - ENSMUSG00000021514.18 ENSMUST00000130799.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3819;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65274994_AA/- chr13:65274994-65274995 - ENSMUSG00000021514.18 ENSMUST00000155732.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3908;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65279725_TT/- chr13:65279725-65279726 - ENSMUSG00000021514.18 ENSMUST00000125510.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65279725_TT/- chr13:65279725-65279726 - ENSMUSG00000021514.18 ENSMUST00000126879.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65279725_TT/- chr13:65279725-65279726 - ENSMUSG00000021514.18 ENSMUST00000130799.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65279725_TT/- chr13:65279725-65279726 - ENSMUSG00000021514.18 ENSMUST00000155732.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65524273_A/C chr13:65524273 C ENSMUSG00000113618.1 ENSMUST00000222230.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65524273_A/C chr13:65524273 C ENSMUSG00000113468.1 ENSMUST00000223034.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65528242_C/T chr13:65528242 T ENSMUSG00000113618.1 ENSMUST00000222230.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65528242_C/T chr13:65528242 T ENSMUSG00000113468.1 ENSMUST00000223034.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65528244_C/T chr13:65528244 T ENSMUSG00000113618.1 ENSMUST00000222230.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65528244_C/T chr13:65528244 T ENSMUSG00000113468.1 ENSMUST00000223034.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65748350_G/A chr13:65748350 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_65865637_T/A chr13:65865637 A ENSMUSG00000097066.1 ENSMUST00000180834.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_65865671_G/A chr13:65865671 A ENSMUSG00000097066.1 ENSMUST00000180834.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_66497970_A/G chr13:66497970 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_66654535_C/T chr13:66654535 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_67083280_ACAT/- chr13:67083280-67083283 - ENSMUSG00000058883.16 ENSMUST00000109742.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1768;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67083280_ACAT/- chr13:67083280-67083283 - ENSMUSG00000058883.16 ENSMUST00000109743.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67083280_ACAT/- chr13:67083280-67083283 - ENSMUSG00000100235.8 ENSMUST00000185856.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67083280_ACAT/- chr13:67083280-67083283 - ENSMUSG00000100235.8 ENSMUST00000185954.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67083280_ACAT/- chr13:67083280-67083283 - ENSMUSG00000100235.8 ENSMUST00000186303.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67083280_ACAT/- chr13:67083280-67083283 - ENSMUSG00000058883.16 ENSMUST00000190566.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1735;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67083280_ACAT/- chr13:67083280-67083283 - ENSMUSG00000114516.1 ENSMUST00000223904.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 - ENSMUSG00000058900.5 ENSMUST00000021997.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2800;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 ACACAC ENSMUSG00000058900.5 ENSMUST00000021997.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2800;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 - ENSMUSG00000114677.1 ENSMUST00000225091.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1639;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 ACACAC ENSMUSG00000114677.1 ENSMUST00000225091.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1639;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 - ENSMUSG00000058900.5 ENSMUST00000225334.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2817;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 ACACAC ENSMUSG00000058900.5 ENSMUST00000225334.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2817;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 - ENSMUSG00000114677.1 ENSMUST00000225399.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1601;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67170379_ACAC/-/ACACAC chr13:67170379-67170382 ACACAC ENSMUSG00000114677.1 ENSMUST00000225399.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1601;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67588851_A/- chr13:67588851 - ENSMUSG00000058093.13 ENSMUST00000012873.15 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=588;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67588851_A/- chr13:67588851 - ENSMUSG00000058093.13 ENSMUST00000138725.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4578;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67588851_A/- chr13:67588851 - ENSMUSG00000058093.13 ENSMUST00000223599.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1261;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67588851_A/- chr13:67588851 - ENSMUSG00000114923.1 ENSMUST00000224814.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3308;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67588851_A/- chr13:67588851 - ENSMUSG00000114923.1 ENSMUST00000225627.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4484;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67840602_A/- chr13:67840602 - ENSMUSG00000058246.8 ENSMUST00000060609.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67840602_A/- chr13:67840602 - ENSMUSG00000058246.8 ENSMUST00000221266.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67840602_A/- chr13:67840602 - ENSMUSG00000058246.8 ENSMUST00000221620.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67840602_A/- chr13:67840602 - ENSMUSG00000058246.8 ENSMUST00000222626.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67840602_A/- chr13:67840602 - ENSMUSG00000058246.8 ENSMUST00000231606.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_67905610_T/A/TA chr13:67905610 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_67905610_T/A/TA chr13:67905610 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_68735418_-/AAGA chr13:68735417-68735418 AAGA ENSMUSG00000021536.7 ENSMUST00000022013.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_69112632_T/A chr13:69112632 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_69280894_CAAA/C/AAAA/CAAAA chr13:69280894-69280897 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_69280894_CAAA/C/AAAA/CAAAA chr13:69280894-69280897 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_69280894_CAAA/C/AAAA/CAAAA chr13:69280894-69280897 CAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_69524757_G/C chr13:69524757 C ENSMUSG00000034575.13 ENSMUST00000044081.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_69524757_G/C chr13:69524757 C ENSMUSG00000034575.13 ENSMUST00000198607.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_69524757_G/C chr13:69524757 C ENSMUSG00000034575.13 ENSMUST00000222497.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4563;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_69524757_G/C chr13:69524757 C ENSMUSG00000034575.13 ENSMUST00000223344.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_69707017_-/GAGA chr13:69707016-69707017 GAGA ENSMUSG00000052981.6 ENSMUST00000065118.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_69792454_ACAC/- chr13:69792454-69792457 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_70035651_AGAGAG/-/AG chr13:70035651-70035656 - ENSMUSG00000113074.1 ENSMUST00000221404.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_70035651_AGAGAG/-/AG chr13:70035651-70035656 AG ENSMUSG00000113074.1 ENSMUST00000221404.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_70350640_-/TCTC chr13:70350639-70350640 TCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_70479449_CAGCACCCACATGCACAGCACCCACATACACAGCACCCACATGCACAGCACCCATATGCC/- chr13:70479449-70479508 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_70479569_CAGCTCCCACATGCACAGCACCCACATACACAGCACCCACATGCACAGTACCCATATGCG/- chr13:70479569-70479628 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_70543056_ATATATATAT/-/ATAT/ATATATAT chr13:70543056-70543065 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_70543056_ATATATATAT/-/ATAT/ATATATAT chr13:70543056-70543065 ATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_70543056_ATATATATAT/-/ATAT/ATATATAT chr13:70543056-70543065 ATATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_70684018_C/G chr13:70684018 G ENSMUSG00000113796.1 ENSMUST00000222903.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2052;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_71011576_AA/- chr13:71011576-71011577 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_71215153_AA/- chr13:71215153-71215154 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_71269605_AA/- chr13:71269605-71269606 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_71778923_-/AAACA chr13:71778922-71778923 AAACA ENSMUSG00000114038.1 ENSMUST00000222586.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_71778923_-/AAACA chr13:71778922-71778923 AAACA ENSMUSG00000114038.1 ENSMUST00000223183.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4456;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_72392744_C/T chr13:72392744 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_72448115_T/A chr13:72448115 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_72960640_GATGA/- chr13:72960640-72960644 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_74219040_TAC/- chr13:74219040-74219042 - ENSMUSG00000021575.16 ENSMUST00000022059.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74219040_TAC/- chr13:74219040-74219042 - ENSMUSG00000021575.16 ENSMUST00000109640.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74219040_TAC/- chr13:74219040-74219042 - ENSMUSG00000021575.16 ENSMUST00000137538.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74219040_TAC/- chr13:74219040-74219042 - ENSMUSG00000021575.16 ENSMUST00000148438.7 Transcript non_coding_transcript_exon_variant 2124-2126 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74219040_TAC/- chr13:74219040-74219042 - ENSMUSG00000021575.16 ENSMUST00000222649.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3930;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74538863_G/T chr13:74538863 T ENSMUSG00000113660.1 ENSMUST00000222151.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4280;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74575009_AA/-/AAA chr13:74575009-74575010 - ENSMUSG00000113204.1 ENSMUST00000221389.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4348;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74575009_AA/-/AAA chr13:74575009-74575010 AAA ENSMUSG00000113204.1 ENSMUST00000221389.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4348;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74575009_AA/-/AAA chr13:74575009-74575010 - ENSMUSG00000113279.1 ENSMUST00000221881.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4454;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_74575009_AA/-/AAA chr13:74575009-74575010 AAA ENSMUSG00000113279.1 ENSMUST00000221881.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4454;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_75346182_GGGG/- chr13:75346182-75346185 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_76223026_CTTT/- chr13:76223026-76223029 - ENSMUSG00000109228.2 ENSMUST00000208418.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_76223026_CTTT/- chr13:76223026-76223029 - ENSMUSG00000109228.2 ENSMUST00000208586.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_76977513_TTTA/- chr13:76977513-76977516 - ENSMUSG00000021596.16 ENSMUST00000109583.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_76977513_TTTA/- chr13:76977513-76977516 - ENSMUSG00000021596.16 ENSMUST00000122843.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_76977513_TTTA/- chr13:76977513-76977516 - ENSMUSG00000021596.16 ENSMUST00000125209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77148949_ATTT/- chr13:77148949-77148952 - ENSMUSG00000071252.6 ENSMUST00000168779.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77148949_ATTT/- chr13:77148949-77148952 - ENSMUSG00000071252.6 ENSMUST00000225605.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77148949_ATTT/- chr13:77148949-77148952 - ENSMUSG00000071252.6 ENSMUST00000225960.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77148949_ATTT/- chr13:77148949-77148952 - ENSMUSG00000071252.6 ENSMUST00000225992.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77994715_-/CA chr13:77994714-77994715 CA ENSMUSG00000064138.14 ENSMUST00000091459.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77994715_-/CA chr13:77994714-77994715 CA ENSMUSG00000064138.14 ENSMUST00000099358.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77994715_-/CA chr13:77994714-77994715 CA ENSMUSG00000064138.14 ENSMUST00000163257.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_77994715_-/CA chr13:77994714-77994715 CA ENSMUSG00000064138.14 ENSMUST00000224217.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_78160807_GTGT/- chr13:78160807-78160810 - ENSMUSG00000064138.14 ENSMUST00000091459.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_78160807_GTGT/- chr13:78160807-78160810 - ENSMUSG00000064138.14 ENSMUST00000099358.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_78160807_GTGT/- chr13:78160807-78160810 - ENSMUSG00000064138.14 ENSMUST00000163257.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_78160807_GTGT/- chr13:78160807-78160810 - ENSMUSG00000064138.14 ENSMUST00000224217.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_78160807_GTGT/- chr13:78160807-78160810 - ENSMUSG00000114401.1 ENSMUST00000224734.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_78160807_GTGT/- chr13:78160807-78160810 - ENSMUSG00000114401.1 ENSMUST00000225211.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_78390943_G/- chr13:78390943 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_79017578_A/G chr13:79017578 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_79454062_A/- chr13:79454062 - ENSMUSG00000096005.1 ENSMUST00000179499.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=908;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_79772081_TCTC/-/TC chr13:79772081-79772084 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_79772081_TCTC/-/TC chr13:79772081-79772084 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_79815189_ACAC/- chr13:79815189-79815192 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_79997425_CA/C/AA chr13:79997425-79997426 C ENSMUSG00000100168.2 ENSMUST00000187731.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_79997425_CA/C/AA chr13:79997425-79997426 AA ENSMUSG00000100168.2 ENSMUST00000187731.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_80031451_AGAG/- chr13:80031451-80031454 - ENSMUSG00000100168.2 ENSMUST00000187731.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_80915017_CACA/- chr13:80915017-80915020 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_81673055_ACAC/- chr13:81673055-81673058 - ENSMUSG00000035834.11 ENSMUST00000048993.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=785;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_81673055_ACAC/- chr13:81673055-81673058 - ENSMUSG00000035840.7 ENSMUST00000049055.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1871;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_81673055_ACAC/- chr13:81673055-81673058 - ENSMUSG00000035834.11 ENSMUST00000162535.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=822;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_81673055_ACAC/- chr13:81673055-81673058 - ENSMUSG00000035840.7 ENSMUST00000224300.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=184;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_81673055_ACAC/- chr13:81673055-81673058 - ENSMUSG00000035840.7 ENSMUST00000224420.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3168;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_82288393_-/AC chr13:82288392-82288393 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_82430045_-/CTTTCT chr13:82430044-82430045 CTTTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_83265699_ACACAC/- chr13:83265699-83265704 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_83317082_GTGT/- chr13:83317082-83317085 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_83937460_-/CACACACACACACACACACACACA chr13:83937459-83937460 CACACACACACACACACACACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_84162252_A/G chr13:84162252 G ENSMUSG00000114335.1 ENSMUST00000224872.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4201;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_84347956_C/G chr13:84347956 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_86346825_G/A chr13:86346825 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_86396175_A/T chr13:86396175 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_86770122_TT/- chr13:86770122-86770123 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_87910489_A/T chr13:87910489 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_88318271_AA/- chr13:88318271-88318272 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_88565637_AA/-/AAA chr13:88565637-88565638 - ENSMUSG00000114273.1 ENSMUST00000224910.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_88565637_AA/-/AAA chr13:88565637-88565638 AAA ENSMUSG00000114273.1 ENSMUST00000224910.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_88567513_G/A/GA chr13:88567513 A ENSMUSG00000114273.1 ENSMUST00000224910.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_88567513_G/A/GA chr13:88567513 GA ENSMUSG00000114273.1 ENSMUST00000224910.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_88777332_A/C chr13:88777332 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_89054308_T/- chr13:89054308 - ENSMUSG00000034488.14 ENSMUST00000043111.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89054308_T/- chr13:89054308 - ENSMUSG00000034488.14 ENSMUST00000081769.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89054308_T/- chr13:89054308 - ENSMUSG00000034488.14 ENSMUST00000118731.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89054308_T/- chr13:89054308 - ENSMUSG00000034488.14 ENSMUST00000140625.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89054308_T/- chr13:89054308 - ENSMUSG00000034488.14 ENSMUST00000153974.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89181347_TC/T/CC chr13:89181347-89181348 T ENSMUSG00000034488.14 ENSMUST00000043111.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89181347_TC/T/CC chr13:89181347-89181348 CC ENSMUSG00000034488.14 ENSMUST00000043111.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89181347_TC/T/CC chr13:89181347-89181348 T ENSMUSG00000034488.14 ENSMUST00000081769.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89181347_TC/T/CC chr13:89181347-89181348 CC ENSMUSG00000034488.14 ENSMUST00000081769.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89181347_TC/T/CC chr13:89181347-89181348 T ENSMUSG00000034488.14 ENSMUST00000118731.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_89181347_TC/T/CC chr13:89181347-89181348 CC ENSMUSG00000034488.14 ENSMUST00000118731.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_90483165_G/T chr13:90483165 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_90663552_T/C chr13:90663552 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_90663559_A/G chr13:90663559 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_91163742_CTCTCTCT/- chr13:91163742-91163749 - ENSMUSG00000021619.6 ENSMUST00000022119.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_91163742_CTCTCTCT/- chr13:91163742-91163749 - ENSMUSG00000021619.6 ENSMUST00000224449.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_91341236_C/- chr13:91341236 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_91431372_-/A/AA chr13:91431371-91431372 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_91431372_-/A/AA chr13:91431371-91431372 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_93201798_A/T chr13:93201798 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_93201882_C/T chr13:93201882 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_93559884_-/CTATCTAT chr13:93559883-93559884 CTATCTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_94707812_GTGT/- chr13:94707812-94707815 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000022192.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000067082.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000159598.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000159608.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000160957.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000162153.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000162292.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000162328.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000162412.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000162716.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95140148_T/G chr13:95140148 G ENSMUSG00000021684.17 ENSMUST00000172104.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95446616_GGGGAGGGGAGGGGGAG/- chr13:95446616-95446632 - ENSMUSG00000021680.8 ENSMUST00000045583.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1785;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95446616_GGGGAGGGGAGGGGGAG/- chr13:95446616-95446632 - ENSMUSG00000021680.8 ENSMUST00000221025.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1692;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_95503329_TGTG/-/TG chr13:95503329-95503332 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_95503329_TGTG/-/TG chr13:95503329-95503332 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_95917762_TG/- chr13:95917762-95917763 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_95919280_TT/- chr13:95919280-95919281 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_96288125_TT/-/TTT chr13:96288125-96288126 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_96288125_TT/-/TTT chr13:96288125-96288126 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_96330427_TGTGTG/-/TGTG chr13:96330427-96330432 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_96330427_TGTGTG/-/TGTG chr13:96330427-96330432 TGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_96647815_TTTT/- chr13:96647815-96647818 - ENSMUSG00000021670.14 ENSMUST00000022176.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1149;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_96647815_TTTT/- chr13:96647815-96647818 - ENSMUSG00000021670.14 ENSMUST00000168855.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_96647815_TTTT/- chr13:96647815-96647818 - ENSMUSG00000021670.14 ENSMUST00000169202.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_96647815_TTTT/- chr13:96647815-96647818 - ENSMUSG00000021670.14 ENSMUST00000169945.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2625;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_96647815_TTTT/- chr13:96647815-96647818 - ENSMUSG00000021670.14 ENSMUST00000170287.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3536;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_97806954_C/A chr13:97806954 A ENSMUSG00000114348.1 ENSMUST00000224296.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_97941508_AA/- chr13:97941508-97941509 - ENSMUSG00000021662.10 ENSMUST00000109426.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_97941508_AA/- chr13:97941508-97941509 - ENSMUSG00000021662.10 ENSMUST00000225269.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=693;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_97941508_AA/- chr13:97941508-97941509 - ENSMUSG00000021662.10 ENSMUST00000225663.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_97941508_AA/- chr13:97941508-97941509 - ENSMUSG00000021662.10 ENSMUST00000225884.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98185599_A/G chr13:98185599 G ENSMUSG00000021662.10 ENSMUST00000109426.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98185599_A/G chr13:98185599 G ENSMUSG00000021662.10 ENSMUST00000225884.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98336513_A/T chr13:98336513 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_98760075_CC/- chr13:98760075-98760076 - ENSMUSG00000041685.16 ENSMUST00000040340.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98760075_CC/- chr13:98760075-98760076 - ENSMUSG00000041685.16 ENSMUST00000099277.11 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98760075_CC/- chr13:98760075-98760076 - ENSMUSG00000041685.16 ENSMUST00000109403.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98760075_CC/- chr13:98760075-98760076 - ENSMUSG00000041685.16 ENSMUST00000179563.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98760075_CC/- chr13:98760075-98760076 - ENSMUSG00000041685.16 ENSMUST00000224992.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98760075_CC/- chr13:98760075-98760076 - ENSMUSG00000041685.16 ENSMUST00000225094.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_98760075_CC/- chr13:98760075-98760076 - ENSMUSG00000041685.16 ENSMUST00000225840.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4426;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100076553_T/A chr13:100076553 A ENSMUSG00000049658.13 ENSMUST00000038104.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100076553_T/A chr13:100076553 A ENSMUSG00000049658.13 ENSMUST00000109379.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100076553_T/A chr13:100076553 A ENSMUSG00000049658.13 ENSMUST00000167203.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2181;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100161915_G/A chr13:100161915 A ENSMUSG00000078945.10 ENSMUST00000067975.11 Transcript synonymous_variant 1681 1612 538 L Ctg/Ttg - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100161915_G/A chr13:100161915 A ENSMUSG00000078945.10 ENSMUST00000117913.7 Transcript synonymous_variant 1795 1612 538 L Ctg/Ttg - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100161915_G/A chr13:100161915 A ENSMUSG00000078945.10 ENSMUST00000167986.2 Transcript synonymous_variant 1664 1612 538 L Ctg/Ttg - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100691668_A/T chr13:100691668 T ENSMUSG00000048924.14 ENSMUST00000057325.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100691668_A/T chr13:100691668 T ENSMUSG00000048924.14 ENSMUST00000170347.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100835403_GTGT/- chr13:100835403-100835406 - ENSMUSG00000021629.10 ENSMUST00000067246.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100835403_GTGT/- chr13:100835403-100835406 - ENSMUSG00000021629.10 ENSMUST00000225922.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2063;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_100931101_T/- chr13:100931101 - ENSMUSG00000100596.1 ENSMUST00000185979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_101225953_-/TCTT chr13:101225952-101225953 TCTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_101275366_G/T chr13:101275366 T ENSMUSG00000100733.2 ENSMUST00000209771.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_101275366_G/T chr13:101275366 T ENSMUSG00000100733.2 ENSMUST00000210384.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_102601298_A/C chr13:102601298 C ENSMUSG00000114730.1 ENSMUST00000225869.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3235;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_103486412_GAGA/- chr13:103486412-103486415 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_103535774_ACAC/- chr13:103535774-103535777 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_104018116_CACA/-/CA chr13:104018116-104018119 - ENSMUSG00000021710.11 ENSMUST00000109315.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4938;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104018116_CACA/-/CA chr13:104018116-104018119 CA ENSMUSG00000021710.11 ENSMUST00000109315.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4938;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 - ENSMUSG00000021711.16 ENSMUST00000022224.15 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 AG ENSMUSG00000021711.16 ENSMUST00000022224.15 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 - ENSMUSG00000042743.13 ENSMUST00000044385.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2513;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 AG ENSMUSG00000042743.13 ENSMUST00000044385.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2513;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 - ENSMUSG00000021711.16 ENSMUST00000141557.7 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 AG ENSMUSG00000021711.16 ENSMUST00000141557.7 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 - ENSMUSG00000021711.16 ENSMUST00000144060.7 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 AG ENSMUSG00000021711.16 ENSMUST00000144060.7 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 - ENSMUSG00000042743.13 ENSMUST00000159574.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 AG ENSMUSG00000042743.13 ENSMUST00000159574.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4450;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 - ENSMUSG00000021711.16 ENSMUST00000179891.1 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104144248_AGAG/-/AG chr13:104144248-104144251 AG ENSMUSG00000021711.16 ENSMUST00000179891.1 Transcript splice_region_variant,intron_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104350810_-/TT chr13:104350809-104350810 TT ENSMUSG00000046169.10 ENSMUST00000065766.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104350810_-/TT chr13:104350809-104350810 TT ENSMUSG00000046169.10 ENSMUST00000223562.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104350810_-/TT chr13:104350809-104350810 TT ENSMUSG00000046169.10 ENSMUST00000224208.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104350810_-/TT chr13:104350809-104350810 TT ENSMUSG00000046169.10 ENSMUST00000224303.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104350810_-/TT chr13:104350809-104350810 TT ENSMUSG00000046169.10 ENSMUST00000224504.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104350810_-/TT chr13:104350809-104350810 TT ENSMUSG00000046169.10 ENSMUST00000224742.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104350810_-/TT chr13:104350809-104350810 TT ENSMUSG00000046169.10 ENSMUST00000224784.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104429482_AA/- chr13:104429482-104429483 - ENSMUSG00000046169.10 ENSMUST00000065766.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104429482_AA/- chr13:104429482-104429483 - ENSMUSG00000046169.10 ENSMUST00000223562.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104429482_AA/- chr13:104429482-104429483 - ENSMUSG00000046169.10 ENSMUST00000224208.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104429482_AA/- chr13:104429482-104429483 - ENSMUSG00000046169.10 ENSMUST00000224303.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104429482_AA/- chr13:104429482-104429483 - ENSMUSG00000046169.10 ENSMUST00000224742.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_104429482_AA/- chr13:104429482-104429483 - ENSMUSG00000046169.10 ENSMUST00000224784.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_105783127_AT/- chr13:105783127-105783128 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_105988573_A/- chr13:105988573 - ENSMUSG00000114564.1 ENSMUST00000223900.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_106032428_GTGT/-/GT chr13:106032428-106032431 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_106032428_GTGT/-/GT chr13:106032428-106032431 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_106335178_TGTGTG/- chr13:106335178-106335183 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_107249691_TT/- chr13:107249691-107249692 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_107413839_TT/- chr13:107413839-107413840 - ENSMUSG00000049233.7 ENSMUST00000061241.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=304;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107466834_CTCCCTCCCTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCG/- chr13:107466834-107466894 - ENSMUSG00000114780.1 ENSMUST00000223617.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2928;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107466834_CTCCCTCCCTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCG/- chr13:107466834-107466894 - ENSMUSG00000114780.1 ENSMUST00000224171.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2928;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107466834_CTCCCTCCCTCCCTCCCTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCG/- chr13:107466834-107466894 - ENSMUSG00000114780.1 ENSMUST00000225957.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2928;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726408_A/C chr13:107726408 C ENSMUSG00000032846.10 ENSMUST00000105097.2 Transcript non_coding_transcript_exon_variant 3666 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726408_A/C chr13:107726408 C ENSMUSG00000032846.10 ENSMUST00000224719.1 Transcript non_coding_transcript_exon_variant 1522 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726408_A/C chr13:107726408 C ENSMUSG00000032846.10 ENSMUST00000225197.1 Transcript non_coding_transcript_exon_variant 2261 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726408_A/C chr13:107726408 C ENSMUSG00000032846.10 ENSMUST00000225822.1 Transcript non_coding_transcript_exon_variant 3520 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726414_A/C chr13:107726414 C ENSMUSG00000032846.10 ENSMUST00000105097.2 Transcript non_coding_transcript_exon_variant 3660 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726414_A/C chr13:107726414 C ENSMUSG00000032846.10 ENSMUST00000224719.1 Transcript non_coding_transcript_exon_variant 1516 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726414_A/C chr13:107726414 C ENSMUSG00000032846.10 ENSMUST00000225197.1 Transcript non_coding_transcript_exon_variant 2255 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_107726414_A/C chr13:107726414 C ENSMUSG00000032846.10 ENSMUST00000225822.1 Transcript non_coding_transcript_exon_variant 3514 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108405212_TTTT/-/TTTTT chr13:108405212-108405215 - ENSMUSG00000021697.12 ENSMUST00000163307.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108405212_TTTT/-/TTTTT chr13:108405212-108405215 TTTTT ENSMUSG00000021697.12 ENSMUST00000163307.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108562831_GTGT/-/GT/GTGTGT chr13:108562831-108562834 - ENSMUSG00000021699.17 ENSMUST00000133929.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108562831_GTGT/-/GT/GTGTGT chr13:108562831-108562834 GT ENSMUSG00000021699.17 ENSMUST00000133929.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108562831_GTGT/-/GT/GTGTGT chr13:108562831-108562834 GTGTGT ENSMUSG00000021699.17 ENSMUST00000133929.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108562831_GTGT/-/GT/GTGTGT chr13:108562831-108562834 - ENSMUSG00000021699.17 ENSMUST00000151111.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108562831_GTGT/-/GT/GTGTGT chr13:108562831-108562834 GT ENSMUSG00000021699.17 ENSMUST00000151111.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108562831_GTGT/-/GT/GTGTGT chr13:108562831-108562834 GTGTGT ENSMUSG00000021699.17 ENSMUST00000151111.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108974162_ATATATAT/- chr13:108974162-108974169 - ENSMUSG00000021699.17 ENSMUST00000122041.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108974162_ATATATAT/- chr13:108974162-108974169 - ENSMUSG00000021699.17 ENSMUST00000177907.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108995606_G/C chr13:108995606 C ENSMUSG00000021699.17 ENSMUST00000122041.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_108995606_G/C chr13:108995606 C ENSMUSG00000021699.17 ENSMUST00000177907.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_109302088_T/G chr13:109302088 G ENSMUSG00000021699.17 ENSMUST00000120671.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_109302088_T/G chr13:109302088 G ENSMUSG00000021699.17 ENSMUST00000122041.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_109302088_T/G chr13:109302088 G ENSMUSG00000021699.17 ENSMUST00000129374.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_109302088_T/G chr13:109302088 G ENSMUSG00000021699.17 ENSMUST00000138938.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_109302088_T/G chr13:109302088 G ENSMUSG00000021699.17 ENSMUST00000153234.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_109302088_T/G chr13:109302088 G ENSMUSG00000021699.17 ENSMUST00000177907.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_110251863_TT/- chr13:110251863-110251864 - ENSMUSG00000021700.10 ENSMUST00000167824.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_110251863_TT/- chr13:110251863-110251864 - ENSMUSG00000021700.10 ENSMUST00000223922.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_110251863_TT/- chr13:110251863-110251864 - ENSMUSG00000021700.10 ENSMUST00000224180.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_110251863_TT/- chr13:110251863-110251864 - ENSMUSG00000021700.10 ENSMUST00000224287.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_111542887_T/C chr13:111542887 C ENSMUSG00000085634.2 ENSMUST00000132880.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_111542887_T/C chr13:111542887 C ENSMUSG00000116016.1 ENSMUST00000231096.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112020928_CACACGCACACACACACACTTACACCCCGCATACATATACACACATACACACACCACATAGGCTCACACAGGCATATACGTCACACAAATACACCACACACACACACCACCACACACACACACACA/- chr13:112020928-112021053 - ENSMUSG00000086092.1 ENSMUST00000156109.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3596;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112335029_-/ACAT chr13:112335028-112335029 ACAT ENSMUSG00000049985.15 ENSMUST00000022275.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112335029_-/ACAT chr13:112335028-112335029 ACAT ENSMUSG00000049985.15 ENSMUST00000056047.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112335029_-/ACAT chr13:112335028-112335029 ACAT ENSMUSG00000049985.15 ENSMUST00000165593.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112335029_-/ACAT chr13:112335028-112335029 ACAT ENSMUSG00000049985.15 ENSMUST00000168684.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112335029_-/ACAT chr13:112335028-112335029 ACAT ENSMUSG00000049985.15 ENSMUST00000223871.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112335029_-/ACAT chr13:112335028-112335029 ACAT ENSMUSG00000049985.15 ENSMUST00000225329.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_112755339_GTGT/- chr13:112755339-112755342 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_112794715_G/A chr13:112794715 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_113273475_T/C chr13:113273475 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_113738972_T/- chr13:113738972 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_114294920_ACAC/- chr13:114294920-114294923 - ENSMUSG00000021764.8 ENSMUST00000022286.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_114294920_ACAC/- chr13:114294920-114294923 - ENSMUSG00000021764.8 ENSMUST00000225035.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_114294920_ACAC/- chr13:114294920-114294923 - ENSMUSG00000021764.8 ENSMUST00000225707.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_114294920_ACAC/- chr13:114294920-114294923 - ENSMUSG00000021764.8 ENSMUST00000232101.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_114425665_CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC/- chr13:114425665-114425716 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_114530902_TATGTGTGTGTA/- chr13:114530902-114530913 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_114696776_-/ACACACAC chr13:114696775-114696776 ACACACAC ENSMUSG00000051758.6 ENSMUST00000181553.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_115249583_T/A chr13:115249583 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_116648791_ACAC/- chr13:116648791-116648794 - ENSMUSG00000114731.1 ENSMUST00000224048.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_116648791_ACAC/- chr13:116648791-116648794 - ENSMUSG00000114347.1 ENSMUST00000224212.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2654;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_116648791_ACAC/- chr13:116648791-116648794 - ENSMUSG00000114347.1 ENSMUST00000225601.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2783;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_117101430_-/AA chr13:117101429-117101430 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_117695434_-/ATCT chr13:117695433-117695434 ATCT ENSMUSG00000021730.8 ENSMUST00000006991.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_118055930_T/C chr13:118055930 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_118126337_TATC/- chr13:118126337-118126340 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_118394596_ACACAC/- chr13:118394596-118394601 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_119076990_C/A chr13:119076990 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_119325401_A/C chr13:119325401 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr13_119604207_TC/CT chr13:119604207-119604208 CT ENSMUSG00000074634.12 ENSMUST00000099147.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_119604207_TC/CT chr13:119604207-119604208 CT ENSMUSG00000074634.12 ENSMUST00000177361.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_119604207_TC/CT chr13:119604207-119604208 CT ENSMUSG00000074634.12 ENSMUST00000178948.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2442;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_119604207_TC/CT chr13:119604207-119604208 CT ENSMUSG00000074634.12 ENSMUST00000223912.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_120033548_G/C chr13:120033548 C ENSMUSG00000095609.2 ENSMUST00000178618.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1211;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr13_120033548_G/C chr13:120033548 C ENSMUSG00000095609.2 ENSMUST00000224713.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1057;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_3288193_C/T chr14:3288193 T ENSMUSG00000079407.9 ENSMUST00000112812.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_3288193_C/T chr14:3288193 T ENSMUSG00000079407.9 ENSMUST00000179153.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_3288193_C/T chr14:3288193 T ENSMUSG00000079407.9 ENSMUST00000186836.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_3288193_C/T chr14:3288193 T ENSMUSG00000079407.9 ENSMUST00000188883.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_4448496_A/T chr14:4448496 T ENSMUSG00000079392.3 ENSMUST00000112785.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3159;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_4448496_A/T chr14:4448496 T ENSMUSG00000079386.8 ENSMUST00000164603.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_4448496_A/T chr14:4448496 T ENSMUSG00000079386.8 ENSMUST00000166848.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_4448496_A/T chr14:4448496 T ENSMUSG00000091418.2 ENSMUST00000168866.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4657;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_5356451_C/G chr14:5356451 G ENSMUSG00000091713.1 ENSMUST00000172276.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=809;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_6310418_C/T chr14:6310418 T ENSMUSG00000096828.1 ENSMUST00000112726.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_6519661_AGAGAG/- chr14:6519661-6519666 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_6859255_AAAGG/- chr14:6859255-6859259 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_7857135_GAGA/- chr14:7857135-7857138 - ENSMUSG00000025278.9 ENSMUST00000052678.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_8159730_AA/-/A chr14:8159730-8159731 - ENSMUSG00000033885.15 ENSMUST00000036682.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_8159730_AA/-/A chr14:8159730-8159731 A ENSMUSG00000033885.15 ENSMUST00000036682.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_8159730_AA/-/A chr14:8159730-8159731 - ENSMUSG00000033885.15 ENSMUST00000112689.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_8159730_AA/-/A chr14:8159730-8159731 A ENSMUSG00000033885.15 ENSMUST00000112689.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_8159730_AA/-/A chr14:8159730-8159731 - ENSMUSG00000033885.15 ENSMUST00000225653.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_8159730_AA/-/A chr14:8159730-8159731 A ENSMUSG00000033885.15 ENSMUST00000225653.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_8692827_-/TCTA chr14:8692826-8692827 TCTA ENSMUSG00000114764.1 ENSMUST00000225348.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4861;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9529867_TGTG/-/TG chr14:9529867-9529870 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_9529867_TGTG/-/TG chr14:9529867-9529870 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000160340.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000160956.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000161179.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000161302.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000161895.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000162278.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000162817.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_9931681_C/A chr14:9931681 A ENSMUSG00000060579.13 ENSMUST00000179394.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000160340.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000160956.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000161179.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000161302.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000161895.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000162278.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000162817.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10086491_T/G chr14:10086491 G ENSMUSG00000060579.13 ENSMUST00000179394.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000160340.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000160956.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000161179.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000161302.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000161895.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000162278.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000162817.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_10256743_AGAG/- chr14:10256743-10256746 - ENSMUSG00000060579.13 ENSMUST00000179394.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11335051_-/AAAAAAAAAAAAAA chr14:11335050-11335051 AAAAAAAAAAAAAA ENSMUSG00000096758.1 ENSMUST00000103995.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=822;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11335051_-/AAAAAAAAAAAAAA chr14:11335050-11335051 AAAAAAAAAAAAAA ENSMUSG00000097148.2 ENSMUST00000181173.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11559528_A/G chr14:11559528 G ENSMUSG00000021745.14 ENSMUST00000022264.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11559528_A/G chr14:11559528 G ENSMUSG00000021745.14 ENSMUST00000142917.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11559528_A/G chr14:11559528 G ENSMUSG00000021745.14 ENSMUST00000148113.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11685122_ACAC/- chr14:11685122-11685125 - ENSMUSG00000021745.14 ENSMUST00000022264.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11685122_ACAC/- chr14:11685122-11685125 - ENSMUSG00000021745.14 ENSMUST00000142917.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11685122_ACAC/- chr14:11685122-11685125 - ENSMUSG00000021745.14 ENSMUST00000148113.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 - ENSMUSG00000021745.14 ENSMUST00000022264.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 AAA ENSMUSG00000021745.14 ENSMUST00000022264.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 - ENSMUSG00000085883.2 ENSMUST00000136693.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 AAA ENSMUSG00000085883.2 ENSMUST00000136693.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 - ENSMUSG00000021745.14 ENSMUST00000142917.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 AAA ENSMUSG00000021745.14 ENSMUST00000142917.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 - ENSMUSG00000021745.14 ENSMUST00000148113.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4045;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_11968176_AAAA/-/AAA chr14:11968176-11968179 AAA ENSMUSG00000021745.14 ENSMUST00000148113.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4045;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_12598584_CTTCTT/- chr14:12598584-12598589 - ENSMUSG00000054423.14 ENSMUST00000067491.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_12598584_CTTCTT/- chr14:12598584-12598589 - ENSMUSG00000054423.14 ENSMUST00000112657.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_12598584_CTTCTT/- chr14:12598584-12598589 - ENSMUSG00000054423.14 ENSMUST00000112658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_12598584_CTTCTT/- chr14:12598584-12598589 - ENSMUSG00000054423.14 ENSMUST00000177814.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_12598584_CTTCTT/- chr14:12598584-12598589 - ENSMUSG00000054423.14 ENSMUST00000224882.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000070323.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000112656.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000145700.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000147677.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000153954.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000223580.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000223583.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000225636.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13464628_ACAC/- chr14:13464628-13464631 - ENSMUSG00000056296.17 ENSMUST00000226094.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_13694199_A/G chr14:13694199 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_14186498_T/A chr14:14186498 A ENSMUSG00000052417.6 ENSMUST00000206298.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14186498_T/A chr14:14186498 A ENSMUSG00000052417.6 ENSMUST00000216079.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14186498_T/A chr14:14186498 A ENSMUSG00000052417.6 ENSMUST00000217642.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000057015.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000223607.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000223761.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000223981.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000224197.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000224222.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000225175.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000225232.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000225238.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000225496.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000225630.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000225979.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14704032_TTT/- chr14:14704032-14704034 - ENSMUSG00000021733.10 ENSMUST00000226079.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 - ENSMUSG00000042567.20 ENSMUST00000063220.13 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 TG ENSMUSG00000042567.20 ENSMUST00000063220.13 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 - ENSMUSG00000042567.20 ENSMUST00000112630.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 TG ENSMUSG00000042567.20 ENSMUST00000112630.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 - ENSMUSG00000042567.20 ENSMUST00000112631.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 TG ENSMUSG00000042567.20 ENSMUST00000112631.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 - ENSMUSG00000042567.20 ENSMUST00000134866.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 TG ENSMUSG00000042567.20 ENSMUST00000134866.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 - ENSMUSG00000042567.20 ENSMUST00000136826.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 TG ENSMUSG00000042567.20 ENSMUST00000136826.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 - ENSMUSG00000042567.20 ENSMUST00000224491.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_14969267_TGTG/-/TG chr14:14969267-14969270 TG ENSMUSG00000042567.20 ENSMUST00000224491.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_15049870_-/TTCT chr14:15049869-15049870 TTCT ENSMUSG00000114538.1 ENSMUST00000224074.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3443;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_15049870_-/TTCT chr14:15049869-15049870 TTCT ENSMUSG00000114538.1 ENSMUST00000225500.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_15121035_C/A chr14:15121035 A ENSMUSG00000114946.1 ENSMUST00000226077.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=58;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_15121040_T/C chr14:15121040 C ENSMUSG00000114946.1 ENSMUST00000226077.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=63;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_15140229_A/T chr14:15140229 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_15548076_C/T chr14:15548076 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_15800785_AAAA/- chr14:15800785-15800788 - ENSMUSG00000114794.1 ENSMUST00000225006.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_15800785_AAAA/- chr14:15800785-15800788 - ENSMUSG00000114794.1 ENSMUST00000225517.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16288180_-/A chr14:16288179-16288180 A ENSMUSG00000021785.8 ENSMUST00000022310.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16288180_-/A chr14:16288179-16288180 A ENSMUSG00000021785.8 ENSMUST00000143947.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4757;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16288180_-/A chr14:16288179-16288180 A ENSMUSG00000021785.8 ENSMUST00000153109.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4880;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16288180_-/A chr14:16288179-16288180 A ENSMUSG00000021785.8 ENSMUST00000224656.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16456220_TGTG/- chr14:16456220-16456223 - ENSMUSG00000017491.9 ENSMUST00000063750.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16456220_TGTG/- chr14:16456220-16456223 - ENSMUSG00000017491.9 ENSMUST00000223576.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16456220_TGTG/- chr14:16456220-16456223 - ENSMUSG00000017491.9 ENSMUST00000225594.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16456220_TGTG/- chr14:16456220-16456223 - ENSMUSG00000017491.9 ENSMUST00000225921.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16753143_C/T chr14:16753143 T ENSMUSG00000017491.9 ENSMUST00000223976.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_16753143_C/T chr14:16753143 T ENSMUSG00000017491.9 ENSMUST00000225245.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17526741_AA/-/A/AAA chr14:17526741-17526742 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_17526741_AA/-/A/AAA chr14:17526741-17526742 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_17526741_AA/-/A/AAA chr14:17526741-17526742 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_17727216_G/A chr14:17727216 A ENSMUSG00000021779.17 ENSMUST00000022303.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17727216_G/A chr14:17727216 A ENSMUSG00000021779.17 ENSMUST00000091471.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17727216_G/A chr14:17727216 A ENSMUSG00000021779.17 ENSMUST00000224438.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17727216_G/A chr14:17727216 A ENSMUSG00000021779.17 ENSMUST00000224470.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17727216_G/A chr14:17727216 A ENSMUSG00000021779.17 ENSMUST00000224597.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17772164_-/CCCCCC chr14:17772163-17772164 CCCCCC ENSMUSG00000021779.17 ENSMUST00000022303.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17772164_-/CCCCCC chr14:17772163-17772164 CCCCCC ENSMUSG00000021779.17 ENSMUST00000091471.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17772164_-/CCCCCC chr14:17772163-17772164 CCCCCC ENSMUSG00000021779.17 ENSMUST00000224438.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17772164_-/CCCCCC chr14:17772163-17772164 CCCCCC ENSMUSG00000021779.17 ENSMUST00000224470.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17772164_-/CCCCCC chr14:17772163-17772164 CCCCCC ENSMUSG00000021779.17 ENSMUST00000224597.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17772164_-/CCCCCC chr14:17772163-17772164 CCCCCC ENSMUSG00000114281.1 ENSMUST00000225878.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1041;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 - ENSMUSG00000021779.17 ENSMUST00000022303.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 A ENSMUSG00000021779.17 ENSMUST00000022303.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 - ENSMUSG00000021779.17 ENSMUST00000091471.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 A ENSMUSG00000021779.17 ENSMUST00000091471.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 - ENSMUSG00000021779.17 ENSMUST00000224470.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 A ENSMUSG00000021779.17 ENSMUST00000224470.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 - ENSMUSG00000021779.17 ENSMUST00000224597.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_17918330_AA/-/A chr14:17918330-17918331 A ENSMUSG00000021779.17 ENSMUST00000224597.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_19470062_C/T chr14:19470062 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_19678302_A/T chr14:19678302 T ENSMUSG00000090660.1 ENSMUST00000167016.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=642;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20223888_T/-/TT chr14:20223888 - ENSMUSG00000114439.1 ENSMUST00000223732.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2463;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20223888_T/-/TT chr14:20223888 TT ENSMUSG00000114439.1 ENSMUST00000223732.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2463;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000039543.16 ENSMUST00000022348.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3013;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000039543.16 ENSMUST00000022349.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3014;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000039543.16 ENSMUST00000056073.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3014;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000021814.17 ENSMUST00000065504.16 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=24;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000021814.17 ENSMUST00000100844.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=25;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000039543.16 ENSMUST00000141432.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3010;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000021814.17 ENSMUST00000224410.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3556;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000021814.17 ENSMUST00000224975.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=41;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000021814.17 ENSMUST00000225941.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=50;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20455236_T/A chr14:20455236 A ENSMUSG00000021814.17 ENSMUST00000226001.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20655152_-/T chr14:20655151-20655152 T ENSMUSG00000039376.13 ENSMUST00000057090.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3794;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20655152_-/T chr14:20655151-20655152 T ENSMUSG00000068697.7 ENSMUST00000090469.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20655152_-/T chr14:20655151-20655152 T ENSMUSG00000039376.13 ENSMUST00000117386.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4266;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20655152_-/T chr14:20655151-20655152 T ENSMUSG00000039376.13 ENSMUST00000119483.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3796;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20655152_-/T chr14:20655151-20655152 T ENSMUSG00000068697.7 ENSMUST00000224436.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20655152_-/T chr14:20655151-20655152 T ENSMUSG00000068697.7 ENSMUST00000224472.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4433;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_20655152_-/T chr14:20655151-20655152 T ENSMUSG00000068697.7 ENSMUST00000225231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3443;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21307850_C/T chr14:21307850 T ENSMUSG00000039197.10 ENSMUST00000045376.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21307850_C/T chr14:21307850 T ENSMUSG00000039197.10 ENSMUST00000223915.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21307850_C/T chr14:21307850 T ENSMUSG00000039197.10 ENSMUST00000224069.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21307850_C/T chr14:21307850 T ENSMUSG00000039197.10 ENSMUST00000225742.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21393379_AA/- chr14:21393379-21393380 - ENSMUSG00000039197.10 ENSMUST00000045376.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21393379_AA/- chr14:21393379-21393380 - ENSMUSG00000039197.10 ENSMUST00000224069.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21430906_GAGA/- chr14:21430906-21430909 - ENSMUSG00000039197.10 ENSMUST00000045376.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21430906_GAGA/- chr14:21430906-21430909 - ENSMUSG00000039197.10 ENSMUST00000224069.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000069648.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000096222.11 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000112458.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000182405.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000182855.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000182964.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000183055.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21603014_A/T chr14:21603014 T ENSMUSG00000021767.18 ENSMUST00000183201.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21705448_A/-/AA chr14:21705448 - ENSMUSG00000063821.6 ENSMUST00000073870.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21705448_A/-/AA chr14:21705448 AA ENSMUSG00000063821.6 ENSMUST00000073870.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21705448_A/-/AA chr14:21705448 - ENSMUSG00000063821.6 ENSMUST00000224735.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2346;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_21705448_A/-/AA chr14:21705448 AA ENSMUSG00000063821.6 ENSMUST00000224735.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2346;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000065788.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000074983.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000100831.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000112423.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000145596.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000163322.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000172099.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000177634.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000179097.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000179836.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000188210.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000188285.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000188991.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000190044.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000190985.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000212542.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000223655.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000223727.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000223749.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000224025.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000224077.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000224232.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000224285.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000224468.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000224787.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000224812.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000225315.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000225431.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000225471.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000225556.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23408572_AGGGAGGGAGGGAGGGAGAGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG/- chr14:23408572-23408623 - ENSMUSG00000063142.15 ENSMUST00000225794.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000145596.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000188210.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000188285.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000188991.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000190044.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000190985.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000223655.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000223727.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000223749.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000224025.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000224077.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000224232.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000224285.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000224468.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000224787.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000224812.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000225315.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000225431.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000225471.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000225556.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000225794.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_23987265_C/G chr14:23987265 G ENSMUSG00000063142.15 ENSMUST00000226051.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24051602_GTGT/-/GT chr14:24051602-24051605 - ENSMUSG00000114722.1 ENSMUST00000224007.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24051602_GTGT/-/GT chr14:24051602-24051605 GT ENSMUSG00000114722.1 ENSMUST00000224007.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24234388_ACAC/- chr14:24234388-24234391 - ENSMUSG00000021782.14 ENSMUST00000073687.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24234388_ACAC/- chr14:24234388-24234391 - ENSMUSG00000021782.14 ENSMUST00000090398.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24234388_ACAC/- chr14:24234388-24234391 - ENSMUSG00000091079.1 ENSMUST00000163715.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3781;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24234388_ACAC/- chr14:24234388-24234391 - ENSMUSG00000021782.14 ENSMUST00000169880.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24311895_TCTT/- chr14:24311895-24311898 - ENSMUSG00000038925.13 ENSMUST00000161740.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1929;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24311895_TCTT/- chr14:24311895-24311898 - ENSMUSG00000038925.13 ENSMUST00000162224.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1936;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_24311895_TCTT/- chr14:24311895-24311898 - ENSMUSG00000038925.13 ENSMUST00000163055.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3631;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25068217_TGTG/- chr14:25068217-25068220 - ENSMUSG00000114924.1 ENSMUST00000224815.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 - ENSMUSG00000007817.15 ENSMUST00000007961.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 AC ENSMUSG00000007817.15 ENSMUST00000007961.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 - ENSMUSG00000007817.15 ENSMUST00000159766.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 AC ENSMUSG00000007817.15 ENSMUST00000159766.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 - ENSMUSG00000007817.15 ENSMUST00000161766.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 AC ENSMUSG00000007817.15 ENSMUST00000161766.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 - ENSMUSG00000007817.15 ENSMUST00000162645.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 AC ENSMUSG00000007817.15 ENSMUST00000162645.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 - ENSMUSG00000114539.1 ENSMUST00000224666.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1006;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25482111_ACAC/-/AC chr14:25482111-25482114 AC ENSMUSG00000114539.1 ENSMUST00000224666.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1006;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_25675013_GCATGC/- chr14:25675013-25675018 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_26367052_GG/- chr14:26367052-26367053 - ENSMUSG00000021874.12 ENSMUST00000022427.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_26367052_GG/- chr14:26367052-26367053 - ENSMUSG00000021874.12 ENSMUST00000059648.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_26367052_GG/- chr14:26367052-26367053 - ENSMUSG00000021874.12 ENSMUST00000159700.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_26367052_GG/- chr14:26367052-26367053 - ENSMUSG00000021874.12 ENSMUST00000160661.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_26367052_GG/- chr14:26367052-26367053 - ENSMUSG00000021874.12 ENSMUST00000168234.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_26367052_GG/- chr14:26367052-26367053 - ENSMUSG00000021874.12 ENSMUST00000170881.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_26810254_G/T chr14:26810254 T ENSMUSG00000021879.13 ENSMUST00000022433.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27191648_A/C chr14:27191648 C ENSMUSG00000021895.10 ENSMUST00000225949.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27682985_TTTTTTT/- chr14:27682985-27682991 - ENSMUSG00000040640.11 ENSMUST00000090302.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27682985_TTTTTTT/- chr14:27682985-27682991 - ENSMUSG00000040640.11 ENSMUST00000209752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27682985_TTTTTTT/- chr14:27682985-27682991 - ENSMUSG00000040640.11 ENSMUST00000210135.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27682985_TTTTTTT/- chr14:27682985-27682991 - ENSMUSG00000040640.11 ENSMUST00000211087.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27682985_TTTTTTT/- chr14:27682985-27682991 - ENSMUSG00000040640.11 ENSMUST00000211145.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27762666_C/T chr14:27762666 T ENSMUSG00000040640.11 ENSMUST00000090302.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27762666_C/T chr14:27762666 T ENSMUSG00000040640.11 ENSMUST00000209752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27762666_C/T chr14:27762666 T ENSMUSG00000040640.11 ENSMUST00000210135.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27762666_C/T chr14:27762666 T ENSMUSG00000040640.11 ENSMUST00000211087.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27762666_C/T chr14:27762666 T ENSMUSG00000040640.11 ENSMUST00000211145.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27762666_C/T chr14:27762666 T ENSMUSG00000040640.11 ENSMUST00000211627.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 - ENSMUSG00000040640.11 ENSMUST00000090302.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 ACACAC ENSMUSG00000040640.11 ENSMUST00000090302.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 - ENSMUSG00000040640.11 ENSMUST00000209752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 ACACAC ENSMUSG00000040640.11 ENSMUST00000209752.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 - ENSMUSG00000040640.11 ENSMUST00000210135.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 ACACAC ENSMUSG00000040640.11 ENSMUST00000210135.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 - ENSMUSG00000040640.11 ENSMUST00000211145.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 ACACAC ENSMUSG00000040640.11 ENSMUST00000211145.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 - ENSMUSG00000040640.11 ENSMUST00000211627.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_27792566_ACAC/-/ACACAC chr14:27792566-27792569 ACACAC ENSMUSG00000040640.11 ENSMUST00000211627.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_29562344_T/C chr14:29562344 C ENSMUSG00000021991.9 ENSMUST00000022567.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30207510_CACA/- chr14:30207510-30207513 - ENSMUSG00000015968.17 ENSMUST00000112249.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30207510_CACA/- chr14:30207510-30207513 - ENSMUSG00000015968.17 ENSMUST00000112250.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30207510_CACA/- chr14:30207510-30207513 - ENSMUSG00000015968.17 ENSMUST00000223803.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30207510_CACA/- chr14:30207510-30207513 - ENSMUSG00000015968.17 ENSMUST00000224198.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30207510_CACA/- chr14:30207510-30207513 - ENSMUSG00000015968.17 ENSMUST00000224395.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30207510_CACA/- chr14:30207510-30207513 - ENSMUSG00000114650.1 ENSMUST00000224405.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=225;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30207510_CACA/- chr14:30207510-30207513 - ENSMUSG00000015968.17 ENSMUST00000224785.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30252896_GTGTGT/- chr14:30252896-30252901 - ENSMUSG00000015968.17 ENSMUST00000112249.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30252896_GTGTGT/- chr14:30252896-30252901 - ENSMUSG00000015968.17 ENSMUST00000112250.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30252896_GTGTGT/- chr14:30252896-30252901 - ENSMUSG00000015968.17 ENSMUST00000223803.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30252896_GTGTGT/- chr14:30252896-30252901 - ENSMUSG00000015968.17 ENSMUST00000224198.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30252896_GTGTGT/- chr14:30252896-30252901 - ENSMUSG00000015968.17 ENSMUST00000224395.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_30252896_GTGTGT/- chr14:30252896-30252901 - ENSMUSG00000015968.17 ENSMUST00000224785.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_31809462_TCTC/- chr14:31809462-31809465 - ENSMUSG00000014496.8 ENSMUST00000014640.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_31809462_TCTC/- chr14:31809462-31809465 - ENSMUSG00000014496.8 ENSMUST00000228037.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_33230427_CACA/- chr14:33230427-33230430 - ENSMUSG00000063506.14 ENSMUST00000111956.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34272375_ACAC/- chr14:34272375-34272378 - ENSMUSG00000041471.9 ENSMUST00000111917.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34272375_ACAC/- chr14:34272375-34272378 - ENSMUSG00000041471.9 ENSMUST00000227006.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34272375_ACAC/- chr14:34272375-34272378 - ENSMUSG00000041471.9 ENSMUST00000227375.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34272375_ACAC/- chr14:34272375-34272378 - ENSMUSG00000041471.9 ENSMUST00000228132.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1111;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34272375_ACAC/- chr14:34272375-34272378 - ENSMUSG00000041471.9 ENSMUST00000228337.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34272375_ACAC/- chr14:34272375-34272378 - ENSMUSG00000041471.9 ENSMUST00000228626.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34272375_ACAC/- chr14:34272375-34272378 - ENSMUSG00000041471.9 ENSMUST00000228704.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34388730_-/TT chr14:34388729-34388730 TT ENSMUSG00000041445.9 ENSMUST00000111908.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34388730_-/TT chr14:34388729-34388730 TT ENSMUSG00000041445.9 ENSMUST00000227130.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34434320_A/T chr14:34434320 T ENSMUSG00000021796.15 ENSMUST00000049005.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34434320_A/T chr14:34434320 T ENSMUSG00000021796.15 ENSMUST00000165280.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34709432_T/C chr14:34709432 C ENSMUSG00000041408.18 ENSMUST00000048263.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34709432_T/C chr14:34709432 C ENSMUSG00000041408.18 ENSMUST00000090027.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34709432_T/C chr14:34709432 C ENSMUSG00000041408.18 ENSMUST00000111895.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34709432_T/C chr14:34709432 C ENSMUSG00000041408.18 ENSMUST00000169910.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_34709432_T/C chr14:34709432 C ENSMUSG00000041408.18 ENSMUST00000172658.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_35403839_T/C chr14:35403839 C ENSMUSG00000041078.7 ENSMUST00000043349.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_35403885_T/C chr14:35403885 C ENSMUSG00000041078.7 ENSMUST00000043349.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_35715461_A/G chr14:35715461 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_35723342_A/- chr14:35723342 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_35856191_TCTC/- chr14:35856191-35856194 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_36019006_G/A chr14:36019006 A ENSMUSG00000115237.1 ENSMUST00000227667.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3621;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_36130650_TCTC/-/TC chr14:36130650-36130653 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_36130650_TCTC/-/TC chr14:36130650-36130653 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37005095_ACAC/-/AC/ACACAC chr14:37005095-37005098 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37005095_ACAC/-/AC/ACACAC chr14:37005095-37005098 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37005095_ACAC/-/AC/ACACAC chr14:37005095-37005098 ACACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37008656_A/G chr14:37008656 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37184706_TCTC/- chr14:37184706-37184709 - ENSMUSG00000114675.1 ENSMUST00000224221.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1641;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_37261044_A/G chr14:37261044 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37394062_G/C chr14:37394062 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37394080_G/A chr14:37394080 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37837223_G/A chr14:37837223 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37843646_A/T chr14:37843646 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37843847_T/A chr14:37843847 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_37929400_T/A chr14:37929400 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_38085606_ATAT/- chr14:38085606-38085609 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_38313945_ATAT/- chr14:38313945-38313948 - ENSMUSG00000114219.1 ENSMUST00000225614.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3956;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_39412131_AA/- chr14:39412131-39412132 - ENSMUSG00000041014.17 ENSMUST00000166968.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_39412131_AA/- chr14:39412131-39412132 - ENSMUSG00000041014.17 ENSMUST00000168810.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_39412131_AA/- chr14:39412131-39412132 - ENSMUSG00000041014.17 ENSMUST00000173780.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_39412131_AA/- chr14:39412131-39412132 - ENSMUSG00000041014.17 ENSMUST00000176122.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_40941098_A/T chr14:40941098 T ENSMUSG00000037824.6 ENSMUST00000047652.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_41215902_ACAC/-/AC chr14:41215902-41215905 - ENSMUSG00000092055.1 ENSMUST00000166690.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3558;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_41215902_ACAC/-/AC chr14:41215902-41215905 AC ENSMUSG00000092055.1 ENSMUST00000166690.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3558;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_41723761_G/C chr14:41723761 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_41773766_G/T chr14:41773766 T ENSMUSG00000114852.1 ENSMUST00000226078.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1325;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_42442063_TTT/-/TT/TTTT chr14:42442063-42442065 - ENSMUSG00000092148.1 ENSMUST00000167326.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_42442063_TTT/-/TT/TTTT chr14:42442063-42442065 TT ENSMUSG00000092148.1 ENSMUST00000167326.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_42442063_TTT/-/TT/TTTT chr14:42442063-42442065 TTTT ENSMUSG00000092148.1 ENSMUST00000167326.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_42453005_-/G chr14:42453004-42453005 G ENSMUSG00000114402.1 ENSMUST00000224985.1 Transcript non_coding_transcript_exon_variant 100-101 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_42453018_A/C chr14:42453018 C ENSMUSG00000114402.1 ENSMUST00000224985.1 Transcript non_coding_transcript_exon_variant 114 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_42830621_T/G chr14:42830621 G ENSMUSG00000079272.2 ENSMUST00000163570.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2151;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_43208329_C/A chr14:43208329 A ENSMUSG00000090385.1 ENSMUST00000165395.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3580;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_45852550_TT/-/T chr14:45852550-45852551 - ENSMUSG00000085866.1 ENSMUST00000131006.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_45852550_TT/-/T chr14:45852550-45852551 T ENSMUSG00000085866.1 ENSMUST00000131006.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_46084170_A/G chr14:46084170 G ENSMUSG00000044285.8 ENSMUST00000111388.4 Transcript non_coding_transcript_exon_variant 43 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_46084170_A/G chr14:46084170 G ENSMUSG00000044285.8 ENSMUST00000227415.1 Transcript non_coding_transcript_exon_variant 143 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_47940900_TGTG/- chr14:47940900-47940903 - ENSMUSG00000115609.1 ENSMUST00000227343.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48007592_G/A chr14:48007592 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000021846.9 ENSMUST00000073150.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000021846.9 ENSMUST00000081029.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3528;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000021846.9 ENSMUST00000226260.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000021846.9 ENSMUST00000226828.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000021846.9 ENSMUST00000227362.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000115555.1 ENSMUST00000227419.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1572;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000021846.9 ENSMUST00000228456.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48195188_-/T chr14:48195187-48195188 T ENSMUSG00000021846.9 ENSMUST00000228519.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000021846.9 ENSMUST00000073150.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000021846.9 ENSMUST00000073150.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000021846.9 ENSMUST00000081029.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000021846.9 ENSMUST00000081029.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000063885.5 ENSMUST00000181413.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4052;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000063885.5 ENSMUST00000181413.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4052;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000021846.9 ENSMUST00000226260.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000021846.9 ENSMUST00000226260.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000021846.9 ENSMUST00000226828.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000021846.9 ENSMUST00000226828.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000021846.9 ENSMUST00000227362.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000021846.9 ENSMUST00000227362.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000021846.9 ENSMUST00000228456.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000021846.9 ENSMUST00000228456.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 ACA ENSMUSG00000021846.9 ENSMUST00000228519.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48223147_GCA/ACA/G chr14:48223147-48223149 G ENSMUSG00000021846.9 ENSMUST00000228519.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48264861_GG/-/G chr14:48264861-48264862 - ENSMUSG00000021846.9 ENSMUST00000073150.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3973;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48264861_GG/-/G chr14:48264861-48264862 G ENSMUSG00000021846.9 ENSMUST00000073150.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3973;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48264861_GG/-/G chr14:48264861-48264862 - ENSMUSG00000021846.9 ENSMUST00000227362.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48264861_GG/-/G chr14:48264861-48264862 G ENSMUSG00000021846.9 ENSMUST00000227362.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48721566_A/T chr14:48721566 T ENSMUSG00000098682.8 ENSMUST00000183522.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1743;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48721566_A/T chr14:48721566 T ENSMUSG00000098682.8 ENSMUST00000183803.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48721566_A/T chr14:48721566 T ENSMUSG00000098682.8 ENSMUST00000184869.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3804;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48721566_A/T chr14:48721566 T ENSMUSG00000098682.8 ENSMUST00000227221.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48721566_A/T chr14:48721566 T ENSMUSG00000098682.8 ENSMUST00000227424.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48721566_A/T chr14:48721566 T ENSMUSG00000098682.8 ENSMUST00000228153.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48815730_AAGAAAGA/-/AAGA chr14:48815730-48815737 - ENSMUSG00000115130.1 ENSMUST00000226916.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48815730_AAGAAAGA/-/AAGA chr14:48815730-48815737 AAGA ENSMUSG00000115130.1 ENSMUST00000226916.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48815730_AAGAAAGA/-/AAGA chr14:48815730-48815737 - ENSMUSG00000098682.8 ENSMUST00000227221.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48815730_AAGAAAGA/-/AAGA chr14:48815730-48815737 AAGA ENSMUSG00000098682.8 ENSMUST00000227221.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48815730_AAGAAAGA/-/AAGA chr14:48815730-48815737 - ENSMUSG00000098682.8 ENSMUST00000228153.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48815730_AAGAAAGA/-/AAGA chr14:48815730-48815737 AAGA ENSMUSG00000098682.8 ENSMUST00000228153.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_48968029_-/GTAT chr14:48968028-48968029 GTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_49126011_AAA/- chr14:49126011-49126013 - ENSMUSG00000115737.1 ENSMUST00000226439.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3299;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_49126011_AAA/- chr14:49126011-49126013 - ENSMUSG00000115737.1 ENSMUST00000227409.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3309;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_49553867_CTAT/- chr14:49553867-49553870 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_50428070_GTGTGT/- chr14:50428070-50428075 - ENSMUSG00000057903.4 ENSMUST00000075261.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2620;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50428070_GTGTGT/- chr14:50428070-50428075 - ENSMUSG00000057903.4 ENSMUST00000216949.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=182;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50621946_TA/- chr14:50621946-50621947 - ENSMUSG00000053815.5 ENSMUST00000066457.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2681;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50621946_TA/- chr14:50621946-50621947 - ENSMUSG00000053815.5 ENSMUST00000213668.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2107;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50621946_TA/- chr14:50621946-50621947 - ENSMUSG00000053815.5 ENSMUST00000216690.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2107;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50858372_CTG/- chr14:50858372-50858374 - ENSMUSG00000006281.8 ENSMUST00000006444.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50858372_CTG/- chr14:50858372-50858374 - ENSMUSG00000006281.8 ENSMUST00000226789.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50887930_TAGA/- chr14:50887930-50887933 - ENSMUSG00000090799.2 ENSMUST00000164415.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3456;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50887930_TAGA/- chr14:50887930-50887933 - ENSMUSG00000090799.2 ENSMUST00000227271.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=649;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_50973301_TTT/- chr14:50973301-50973303 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_51025516_GTGT/- chr14:51025516-51025519 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_51308005_TT/- chr14:51308005-51308006 - ENSMUSG00000094991.2 ENSMUST00000179170.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4842;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51308005_TT/- chr14:51308005-51308006 - ENSMUSG00000094991.2 ENSMUST00000186974.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3491;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000022438.11 Transcript missense_variant 370 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000159674.3 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000089761.3 ENSMUST00000161565.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000068399.5 ENSMUST00000162998.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000163019.8 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000228139.2 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000232797.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000232951.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000233126.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000233280.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000233394.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000233651.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000233766.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000233848.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51413201_A/G chr14:51413201 G ENSMUSG00000000606.17 ENSMUST00000233920.1 Transcript missense_variant 551 370 124 N/D Aat/Gat - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51433751_AAAT/- chr14:51433751-51433754 - ENSMUSG00000089761.3 ENSMUST00000161565.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1836;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51433751_AAAT/- chr14:51433751-51433754 - ENSMUSG00000115374.1 ENSMUST00000161721.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1708;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51433751_AAAT/- chr14:51433751-51433754 - ENSMUSG00000068399.5 ENSMUST00000162998.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51433751_AAAT/- chr14:51433751-51433754 - ENSMUSG00000115374.1 ENSMUST00000226341.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1708;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51839710_GT/- chr14:51839710-51839711 - ENSMUSG00000091812.1 ENSMUST00000164700.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=249;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_51839710_GT/- chr14:51839710-51839711 - ENSMUSG00000099191.1 ENSMUST00000183799.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2453;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_52190684_-/GAA chr14:52190683-52190684 GAA ENSMUSG00000035726.8 ENSMUST00000046709.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_52251020_AGTATAGTAT/- chr14:52251020-52251029 - ENSMUSG00000053754.14 ENSMUST00000199135.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3366;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_52251020_AGTATAGTAT/- chr14:52251020-52251029 - ENSMUSG00000053754.14 ENSMUST00000200169.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_52733876_T/C chr14:52733876 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_53242669_AATAAATG/- chr14:53242669-53242676 - ENSMUSG00000105467.1 ENSMUST00000164511.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3116;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53242669_AATAAATG/- chr14:53242669-53242676 - ENSMUSG00000093915.2 ENSMUST00000179583.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1425;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53324215_A/C chr14:53324215 C ENSMUSG00000105080.1 ENSMUST00000178100.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=417;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53324215_A/C chr14:53324215 C ENSMUSG00000095370.2 ENSMUST00000179607.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4931;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53626170_AGAG/-/AG chr14:53626170-53626173 - ENSMUSG00000095958.3 ENSMUST00000103657.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3925;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53626170_AGAG/-/AG chr14:53626170-53626173 AG ENSMUSG00000095958.3 ENSMUST00000103657.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3925;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53727323_TT/-/TTT chr14:53727323-53727324 - ENSMUSG00000082663.2 ENSMUST00000117226.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2234;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53727323_TT/-/TTT chr14:53727323-53727324 TTT ENSMUSG00000082663.2 ENSMUST00000117226.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2234;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_53857806_-/AAAT chr14:53857805-53857806 AAAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_54126862_GTGT/- chr14:54126862-54126865 - ENSMUSG00000076870.2 ENSMUST00000103682.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54126862_GTGT/- chr14:54126862-54126865 - ENSMUSG00000096176.1 ENSMUST00000177564.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4621;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54126862_GTGT/- chr14:54126862-54126865 - ENSMUSG00000106112.1 ENSMUST00000196615.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1433;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54126862_GTGT/- chr14:54126862-54126865 - ENSMUSG00000104658.4 ENSMUST00000197620.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1467;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54126862_GTGT/- chr14:54126862-54126865 - ENSMUSG00000104658.4 ENSMUST00000198124.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1520;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 - ENSMUSG00000000958.10 ENSMUST00000000984.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 AAA ENSMUSG00000000958.10 ENSMUST00000000984.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 - ENSMUSG00000000958.10 ENSMUST00000195970.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 AAA ENSMUSG00000000958.10 ENSMUST00000195970.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 - ENSMUSG00000000958.10 ENSMUST00000197440.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 AAA ENSMUSG00000000958.10 ENSMUST00000197440.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 - ENSMUSG00000000958.10 ENSMUST00000197667.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 AAA ENSMUSG00000000958.10 ENSMUST00000197667.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 - ENSMUSG00000000958.10 ENSMUST00000200545.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 AAA ENSMUSG00000000958.10 ENSMUST00000200545.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 - ENSMUSG00000000958.10 ENSMUST00000226753.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 AAA ENSMUSG00000000958.10 ENSMUST00000226753.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 - ENSMUSG00000000958.10 ENSMUST00000228488.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54397680_AAAAA/-/AAA chr14:54397680-54397684 AAA ENSMUSG00000000958.10 ENSMUST00000228488.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54493256_-/AAAAAAAA chr14:54493255-54493256 AAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_54837760_ATTT/- chr14:54837760-54837763 - ENSMUSG00000112858.2 ENSMUST00000218311.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54837760_ATTT/- chr14:54837760-54837763 - ENSMUSG00000112858.2 ENSMUST00000219350.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54837760_ATTT/- chr14:54837760-54837763 - ENSMUSG00000112858.2 ENSMUST00000219496.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=364;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54837760_ATTT/- chr14:54837760-54837763 - ENSMUSG00000112858.2 ENSMUST00000219519.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54837760_ATTT/- chr14:54837760-54837763 - ENSMUSG00000112858.2 ENSMUST00000220122.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54837760_ATTT/- chr14:54837760-54837763 - ENSMUSG00000112858.2 ENSMUST00000220208.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_54837760_ATTT/- chr14:54837760-54837763 - ENSMUSG00000112858.2 ENSMUST00000220403.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000048781.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=298;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226270.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=24;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226295.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=654;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226352.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226514.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=28;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226519.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226650.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226664.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000115622.1 ENSMUST00000226714.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4135;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000226770.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000228240.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000228283.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=280;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000115778.1 ENSMUST00000228843.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=890;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55543290_-/AAGA chr14:55543289-55543290 AAGA ENSMUSG00000040618.7 ENSMUST00000228921.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55611705_C/T chr14:55611705 T ENSMUSG00000002325.15 ENSMUST00000126269.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2972;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55611705_C/T chr14:55611705 T ENSMUSG00000002325.15 ENSMUST00000130697.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1675;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55611705_C/T chr14:55611705 T ENSMUSG00000002325.15 ENSMUST00000134863.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1675;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55611705_C/T chr14:55611705 T ENSMUSG00000002325.15 ENSMUST00000138037.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1675;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55611705_C/T chr14:55611705 T ENSMUSG00000002325.15 ENSMUST00000145680.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1678;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_55611705_C/T chr14:55611705 T ENSMUSG00000002325.15 ENSMUST00000226275.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2378;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56133901_GTGT/- chr14:56133901-56133904 - ENSMUSG00000059256.6 ENSMUST00000082093.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56662064_GA/- chr14:56662064-56662065 - ENSMUSG00000054509.7 ENSMUST00000161553.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2270;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56662064_GA/- chr14:56662064-56662065 - ENSMUSG00000054509.7 ENSMUST00000162312.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2272;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56662064_GA/- chr14:56662064-56662065 - ENSMUSG00000110165.1 ENSMUST00000210886.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3656;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56662064_GA/- chr14:56662064-56662065 - ENSMUSG00000110165.1 ENSMUST00000210920.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3756;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56662064_GA/- chr14:56662064-56662065 - ENSMUSG00000110165.1 ENSMUST00000211600.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3540;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56709580_TT/- chr14:56709580-56709581 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_56766551_AAA/- chr14:56766551-56766553 - ENSMUSG00000021938.12 ENSMUST00000022507.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56766551_AAA/- chr14:56766551-56766553 - ENSMUSG00000021938.12 ENSMUST00000163924.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56766551_AAA/- chr14:56766551-56766553 - ENSMUSG00000021938.12 ENSMUST00000168524.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4684;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56766551_AAA/- chr14:56766551-56766553 - ENSMUSG00000021938.12 ENSMUST00000168575.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56803190_GTGT/- chr14:56803190-56803193 - ENSMUSG00000040123.17 ENSMUST00000039812.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56803190_GTGT/- chr14:56803190-56803193 - ENSMUSG00000040123.17 ENSMUST00000111285.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56803190_GTGT/- chr14:56803190-56803193 - ENSMUSG00000040123.17 ENSMUST00000173954.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56803190_GTGT/- chr14:56803190-56803193 - ENSMUSG00000040123.17 ENSMUST00000224498.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_56803190_GTGT/- chr14:56803190-56803193 - ENSMUSG00000040123.17 ENSMUST00000225699.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_57598649_CC/- chr14:57598649-57598650 - ENSMUSG00000021952.16 ENSMUST00000089482.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_57598649_CC/- chr14:57598649-57598650 - ENSMUSG00000021952.16 ENSMUST00000174152.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_57598649_CC/- chr14:57598649-57598650 - ENSMUSG00000021952.16 ENSMUST00000174545.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_57598653_GG/- chr14:57598653-57598654 - ENSMUSG00000021952.16 ENSMUST00000089482.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_57598653_GG/- chr14:57598653-57598654 - ENSMUSG00000021952.16 ENSMUST00000174152.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_57598653_GG/- chr14:57598653-57598654 - ENSMUSG00000021952.16 ENSMUST00000174545.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59372480_TCTC/- chr14:59372480-59372483 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_59449463_-/A chr14:59449462-59449463 A ENSMUSG00000021981.10 ENSMUST00000022553.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59449463_-/A chr14:59449462-59449463 A ENSMUSG00000021981.10 ENSMUST00000224281.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59449463_-/A chr14:59449462-59449463 A ENSMUSG00000021981.10 ENSMUST00000225149.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59449463_-/A chr14:59449462-59449463 A ENSMUSG00000021981.10 ENSMUST00000225595.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59469465_C/A chr14:59469465 A ENSMUSG00000021981.10 ENSMUST00000022553.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59469465_C/A chr14:59469465 A ENSMUSG00000021981.10 ENSMUST00000223678.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59469465_C/A chr14:59469465 A ENSMUSG00000021981.10 ENSMUST00000224281.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59469465_C/A chr14:59469465 A ENSMUSG00000021981.10 ENSMUST00000225595.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59787792_G/T chr14:59787792 T ENSMUSG00000021983.16 ENSMUST00000080368.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_59938129_GAGAGA/- chr14:59938129-59938134 - ENSMUSG00000021983.16 ENSMUST00000080368.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_60257030_GTGT/-/GT chr14:60257030-60257033 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_60257030_GTGT/-/GT chr14:60257030-60257033 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_61023919_G/A chr14:61023919 A ENSMUSG00000060548.13 ENSMUST00000111234.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61023919_G/A chr14:61023919 A ENSMUSG00000060548.13 ENSMUST00000111236.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61023919_G/A chr14:61023919 A ENSMUSG00000060548.13 ENSMUST00000224371.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61023919_G/A chr14:61023919 A ENSMUSG00000060548.13 ENSMUST00000225730.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61023923_G/A chr14:61023923 A ENSMUSG00000060548.13 ENSMUST00000111234.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61023923_G/A chr14:61023923 A ENSMUSG00000060548.13 ENSMUST00000111236.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61023923_G/A chr14:61023923 A ENSMUSG00000060548.13 ENSMUST00000224371.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61023923_G/A chr14:61023923 A ENSMUSG00000060548.13 ENSMUST00000225730.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_61780757_TATCTATC/-/TATC chr14:61780757-61780764 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_61780757_TATCTATC/-/TATC chr14:61780757-61780764 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_62035053_A/G chr14:62035053 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_62503207_TTTTTTT/- chr14:62503207-62503213 - ENSMUSG00000100486.7 ENSMUST00000209021.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_62694458_AA/- chr14:62694458-62694459 - ENSMUSG00000035161.7 ENSMUST00000053959.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_62694458_AA/- chr14:62694458-62694459 - ENSMUSG00000091155.1 ENSMUST00000171692.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2215;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_62694458_AA/- chr14:62694458-62694459 - ENSMUSG00000035161.7 ENSMUST00000223585.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_63679943_GTGT/- chr14:63679943-63679946 - ENSMUSG00000035067.9 ENSMUST00000119973.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_63870742_TGTGTG/- chr14:63870742-63870747 - ENSMUSG00000021958.5 ENSMUST00000022528.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_63993925_GTGT/- chr14:63993925-63993928 - ENSMUSG00000046049.7 ENSMUST00000058229.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_65332802_AA/- chr14:65332802-65332803 - ENSMUSG00000114209.1 ENSMUST00000223901.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 - ENSMUSG00000022043.19 ENSMUST00000022623.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1260;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 G ENSMUSG00000022043.19 ENSMUST00000022623.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1260;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 - ENSMUSG00000022043.19 ENSMUST00000121006.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1319;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 G ENSMUSG00000022043.19 ENSMUST00000121006.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1319;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 - ENSMUSG00000085984.7 ENSMUST00000143392.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 G ENSMUSG00000085984.7 ENSMUST00000143392.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 - ENSMUSG00000085984.7 ENSMUST00000145637.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 G ENSMUSG00000085984.7 ENSMUST00000145637.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 - ENSMUSG00000085984.7 ENSMUST00000153646.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 G ENSMUSG00000085984.7 ENSMUST00000153646.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 - ENSMUSG00000022043.19 ENSMUST00000223737.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1295;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66295770_GG/-/G chr14:66295770-66295771 G ENSMUSG00000022043.19 ENSMUST00000223737.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1295;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66441013_TGTG/- chr14:66441013-66441016 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_66704036_C/T chr14:66704036 T ENSMUSG00000045875.13 ENSMUST00000054661.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66704036_C/T chr14:66704036 T ENSMUSG00000045875.13 ENSMUST00000159068.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66704036_C/T chr14:66704036 T ENSMUSG00000045875.13 ENSMUST00000159365.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66704036_C/T chr14:66704036 T ENSMUSG00000045875.13 ENSMUST00000161339.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66704036_C/T chr14:66704036 T ENSMUSG00000045875.13 ENSMUST00000225182.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66869272_TT/- chr14:66869272-66869273 - ENSMUSG00000022048.8 ENSMUST00000022629.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=584;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66869272_TT/- chr14:66869272-66869273 - ENSMUSG00000075553.2 ENSMUST00000100453.1 Transcript non_coding_transcript_exon_variant 423-424 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_66869272_TT/- chr14:66869272-66869273 - ENSMUSG00000075553.2 ENSMUST00000225817.1 Transcript non_coding_transcript_exon_variant 423-424 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_67119914_-/TG chr14:67119913-67119914 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_67983529_GTGT/- chr14:67983529-67983532 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_68773292_G/A chr14:68773292 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_68817796_G/A chr14:68817796 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_68937194_A/T chr14:68937194 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_69044804_-/G chr14:69044803-69044804 G ENSMUSG00000014813.9 ENSMUST00000014957.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2999;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_69911888_G/C chr14:69911888 C ENSMUSG00000022085.4 ENSMUST00000022678.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_69970488_T/A chr14:69970488 A ENSMUSG00000022085.4 ENSMUST00000022678.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70063671_AA/- chr14:70063671-70063672 - ENSMUSG00000022085.4 ENSMUST00000022678.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3753;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70072283_AAA/- chr14:70072283-70072285 - ENSMUSG00000033730.4 ENSMUST00000035908.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4918;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 - ENSMUSG00000022094.15 ENSMUST00000022688.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 T ENSMUSG00000022094.15 ENSMUST00000022688.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 TTT ENSMUSG00000022094.15 ENSMUST00000022688.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 - ENSMUSG00000022094.15 ENSMUST00000068044.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 T ENSMUSG00000022094.15 ENSMUST00000068044.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 TTT ENSMUSG00000022094.15 ENSMUST00000068044.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 - ENSMUSG00000022094.15 ENSMUST00000127000.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2986;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 T ENSMUSG00000022094.15 ENSMUST00000127000.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2986;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 TTT ENSMUSG00000022094.15 ENSMUST00000127000.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2986;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 - ENSMUSG00000022094.15 ENSMUST00000142598.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 T ENSMUSG00000022094.15 ENSMUST00000142598.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 TTT ENSMUSG00000022094.15 ENSMUST00000142598.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2976;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 - ENSMUSG00000022094.15 ENSMUST00000143153.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3007;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 T ENSMUSG00000022094.15 ENSMUST00000143153.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3007;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 TTT ENSMUSG00000022094.15 ENSMUST00000143153.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3007;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 - ENSMUSG00000022094.15 ENSMUST00000146453.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 T ENSMUSG00000022094.15 ENSMUST00000146453.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70354401_TT/-/T/TTT chr14:70354401-70354402 TTT ENSMUSG00000022094.15 ENSMUST00000146453.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033589.4 ENSMUST00000047218.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2575;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033595.7 ENSMUST00000047331.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4454;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033595.7 ENSMUST00000226376.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4751;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033589.4 ENSMUST00000226556.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2900;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033589.4 ENSMUST00000226563.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2472;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033589.4 ENSMUST00000226592.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4803;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033589.4 ENSMUST00000227013.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4742;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70542778_AA/- chr14:70542778-70542779 - ENSMUSG00000033589.4 ENSMUST00000228444.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3402;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70759665_TTT/- chr14:70759665-70759667 - ENSMUSG00000022100.14 ENSMUST00000022696.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70759665_TTT/- chr14:70759665-70759667 - ENSMUSG00000022100.14 ENSMUST00000167242.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70759665_TTT/- chr14:70759665-70759667 - ENSMUSG00000022100.14 ENSMUST00000226448.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_70759665_TTT/- chr14:70759665-70759667 - ENSMUSG00000022100.14 ENSMUST00000226607.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_71942215_AA/-/AAA chr14:71942215-71942216 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_71942215_AA/-/AAA chr14:71942215-71942216 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_72159316_TC/T/CC chr14:72159316-72159317 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_72159316_TC/T/CC chr14:72159316-72159317 CC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_72898514_GTGT/- chr14:72898514-72898517 - ENSMUSG00000115475.1 ENSMUST00000228487.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3642;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_72948136_G/T chr14:72948136 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_73336137_C/T chr14:73336137 T ENSMUSG00000115573.1 ENSMUST00000226676.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=796;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_73621389_TT/-/T chr14:73621389-73621390 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_73621389_TT/-/T chr14:73621389-73621390 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_73789076_C/A chr14:73789076 A ENSMUSG00000115289.1 ENSMUST00000226696.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_73789076_C/A chr14:73789076 A ENSMUSG00000115289.1 ENSMUST00000228430.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_73789079_C/A chr14:73789079 A ENSMUSG00000115289.1 ENSMUST00000226696.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_73789079_C/A chr14:73789079 A ENSMUSG00000115289.1 ENSMUST00000228430.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74368758_AA/- chr14:74368758-74368759 - ENSMUSG00000115704.1 ENSMUST00000226557.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74368758_AA/- chr14:74368758-74368759 - ENSMUSG00000115845.1 ENSMUST00000226927.1 Transcript non_coding_transcript_exon_variant 677-678 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74385981_GTGT/- chr14:74385981-74385984 - ENSMUSG00000115704.1 ENSMUST00000226557.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74566052_C/A chr14:74566052 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_74729522_CACACA/- chr14:74729522-74729527 - ENSMUSG00000021996.16 ENSMUST00000022573.16 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2770;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74729522_CACACA/- chr14:74729522-74729527 - ENSMUSG00000021996.16 ENSMUST00000175712.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2830;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74729522_CACACA/- chr14:74729522-74729527 - ENSMUSG00000021996.16 ENSMUST00000176484.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2794;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74729522_CACACA/- chr14:74729522-74729527 - ENSMUSG00000021996.16 ENSMUST00000176957.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2857;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74729522_CACACA/- chr14:74729522-74729527 - ENSMUSG00000021996.16 ENSMUST00000177445.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2792;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74892788_AGAG/- chr14:74892788-74892791 - ENSMUSG00000068015.8 ENSMUST00000088970.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74892788_AGAG/- chr14:74892788-74892791 - ENSMUSG00000068015.8 ENSMUST00000227433.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_74892788_AGAG/- chr14:74892788-74892791 - ENSMUSG00000068015.8 ENSMUST00000228252.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_75114542_-/A chr14:75114541-75114542 A ENSMUSG00000021997.4 ENSMUST00000022574.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_76610821_GA/- chr14:76610821-76610822 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_77122204_T/C chr14:77122204 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_77888033_TGTG/-/TG chr14:77888033-77888036 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_77888033_TGTG/-/TG chr14:77888033-77888036 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_78644925_TTCTTC/- chr14:78644925-78644930 - ENSMUSG00000034731.11 ENSMUST00000074729.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_78644925_TTCTTC/- chr14:78644925-78644930 - ENSMUSG00000034731.11 ENSMUST00000226342.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_78644925_TTCTTC/- chr14:78644925-78644930 - ENSMUSG00000034731.11 ENSMUST00000227537.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=474;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_78644925_TTCTTC/- chr14:78644925-78644930 - ENSMUSG00000034731.11 ENSMUST00000227820.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_78901563_T/A chr14:78901563 A ENSMUSG00000058997.8 ENSMUST00000040990.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_78901563_T/A chr14:78901563 A ENSMUSG00000058997.8 ENSMUST00000227255.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_78901563_T/A chr14:78901563 A ENSMUSG00000058997.8 ENSMUST00000227676.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_78901563_T/A chr14:78901563 A ENSMUSG00000058997.8 ENSMUST00000228884.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_79213452_C/A chr14:79213452 A ENSMUSG00000071262.10 ENSMUST00000040802.4 Transcript synonymous_variant 1516 906 302 G ggG/ggT - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_79213452_C/A chr14:79213452 A ENSMUSG00000071262.10 ENSMUST00000161649.8 Transcript synonymous_variant 1654 906 302 G ggG/ggT - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_79230082_TGTG/- chr14:79230082-79230085 - ENSMUSG00000071262.10 ENSMUST00000161649.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_79230082_TGTG/- chr14:79230082-79230085 - ENSMUSG00000071262.10 ENSMUST00000162937.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_80089235_C/T chr14:80089235 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_80814350_AA/- chr14:80814350-80814351 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_81056713_GAGACA/- chr14:81056713-81056718 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_81056724_C/T chr14:81056724 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_81588455_CACA/- chr14:81588455-81588458 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_81731493_C/T chr14:81731493 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_81946275_TCTC/- chr14:81946275-81946278 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_82767157_A/G chr14:82767157 G ENSMUSG00000115051.1 ENSMUST00000227503.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3234;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_82767163_A/G chr14:82767163 G ENSMUSG00000115051.1 ENSMUST00000227503.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3228;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_84147091_G/A chr14:84147091 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_84147095_G/A chr14:84147095 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_84263446_TCCA/- chr14:84263446-84263449 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_84428617_A/C chr14:84428617 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_84795120_ACAC/-/AC chr14:84795120-84795123 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_84795120_ACAC/-/AC chr14:84795120-84795123 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_85105443_ATATAT/- chr14:85105443-85105448 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_85197316_G/A chr14:85197316 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_85839309_C/A chr14:85839309 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_85912246_GTGT/-/GTGTGT chr14:85912246-85912249 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_85912246_GTGT/-/GTGTGT chr14:85912246-85912249 GTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_86131317_AT/- chr14:86131317-86131318 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_86298331_-/AGAA chr14:86298330-86298331 AGAA ENSMUSG00000115777.1 ENSMUST00000228609.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87112602_A/G chr14:87112602 G ENSMUSG00000022021.14 ENSMUST00000022599.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87112602_A/G chr14:87112602 G ENSMUSG00000022021.14 ENSMUST00000168889.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87112602_A/G chr14:87112602 G ENSMUSG00000022021.14 ENSMUST00000226134.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87112602_A/G chr14:87112602 G ENSMUSG00000022021.14 ENSMUST00000226492.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87112602_A/G chr14:87112602 G ENSMUSG00000022021.14 ENSMUST00000227666.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87112602_A/G chr14:87112602 G ENSMUSG00000022021.14 ENSMUST00000228000.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87442840_CACA/- chr14:87442840-87442843 - ENSMUSG00000022019.16 ENSMUST00000168275.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87442840_CACA/- chr14:87442840-87442843 - ENSMUSG00000022019.16 ENSMUST00000169504.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87442840_CACA/- chr14:87442840-87442843 - ENSMUSG00000022019.16 ENSMUST00000170865.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87442840_CACA/- chr14:87442840-87442843 - ENSMUSG00000115484.1 ENSMUST00000227005.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1150;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_87850817_A/T chr14:87850817 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_88325543_CC/- chr14:88325543-88325544 - ENSMUSG00000115479.1 ENSMUST00000226380.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_88325543_CC/- chr14:88325543-88325544 - ENSMUSG00000115479.1 ENSMUST00000227521.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_88332729_TG/- chr14:88332729-88332730 - ENSMUSG00000115479.1 ENSMUST00000226380.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_88332729_TG/- chr14:88332729-88332730 - ENSMUSG00000115479.1 ENSMUST00000227521.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_88648473_TGTG/- chr14:88648473-88648476 - ENSMUSG00000115623.1 ENSMUST00000227074.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_89031574_ACAC/- chr14:89031574-89031577 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_89992574_-/A chr14:89992573-89992574 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91188771_ACAC/- chr14:91188771-91188774 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91248134_GTGT/- chr14:91248134-91248137 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91274720_CT/C/TT chr14:91274720-91274721 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91274720_CT/C/TT chr14:91274720-91274721 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91677492_TG/CA chr14:91677492-91677493 CA ENSMUSG00000115171.1 ENSMUST00000227750.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_91742271_ATCT/- chr14:91742271-91742274 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91807098_A/T chr14:91807098 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91811438_GTGT/-/GT chr14:91811438-91811441 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_91811438_GTGT/-/GT chr14:91811438-91811441 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_92705307_G/T chr14:92705307 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_92929808_G/C chr14:92929808 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_92945201_TATATA/-/TATA chr14:92945201-92945206 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_92945201_TATATA/-/TATA chr14:92945201-92945206 TATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_93409212_C/A chr14:93409212 A ENSMUSG00000055421.8 ENSMUST00000068992.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_93409212_C/A chr14:93409212 A ENSMUSG00000055421.8 ENSMUST00000192221.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_93409212_C/A chr14:93409212 A ENSMUSG00000055421.8 ENSMUST00000193901.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_93409212_C/A chr14:93409212 A ENSMUSG00000055421.8 ENSMUST00000194129.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_93409212_C/A chr14:93409212 A ENSMUSG00000055421.8 ENSMUST00000195376.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_93409212_C/A chr14:93409212 A ENSMUSG00000055421.8 ENSMUST00000195826.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_95579853_ACAC/- chr14:95579853-95579856 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_95601947_AAAAA/- chr14:95601947-95601951 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_95689736_-/A chr14:95689735-95689736 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_95689737_-/A chr14:95689736-95689737 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_96438222_AAAA/- chr14:96438222-96438225 - ENSMUSG00000022076.10 ENSMUST00000022666.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_97074918_T/A chr14:97074918 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_97646043_AGAG/-/AG chr14:97646043-97646046 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_97646043_AGAG/-/AG chr14:97646043-97646046 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_99201581_TT/- chr14:99201581-99201582 - ENSMUSG00000022064.10 ENSMUST00000022650.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_99201581_TT/- chr14:99201581-99201582 - ENSMUSG00000022064.10 ENSMUST00000226935.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_99201581_TT/- chr14:99201581-99201582 - ENSMUSG00000022064.10 ENSMUST00000227969.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_99201581_TT/- chr14:99201581-99201582 - ENSMUSG00000022064.10 ENSMUST00000228288.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_99201581_TT/- chr14:99201581-99201582 - ENSMUSG00000022064.10 ENSMUST00000228598.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3207;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_100073916_ACAC/-/ACACAC chr14:100073916-100073919 - ENSMUSG00000072294.5 ENSMUST00000097079.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_100073916_ACAC/-/ACACAC chr14:100073916-100073919 ACACAC ENSMUSG00000072294.5 ENSMUST00000097079.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_100073916_ACAC/-/ACACAC chr14:100073916-100073919 - ENSMUSG00000072294.5 ENSMUST00000226774.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_100073916_ACAC/-/ACACAC chr14:100073916-100073919 ACACAC ENSMUSG00000072294.5 ENSMUST00000226774.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_100073916_ACAC/-/ACACAC chr14:100073916-100073919 - ENSMUSG00000072294.5 ENSMUST00000228216.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_100073916_ACAC/-/ACACAC chr14:100073916-100073919 ACACAC ENSMUSG00000072294.5 ENSMUST00000228216.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_100963888_-/T chr14:100963887-100963888 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_101307067_AA/-/A chr14:101307067-101307068 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_101307067_AA/-/A chr14:101307067-101307068 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_101366242_G/A chr14:101366242 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_101942564_CACA/-/CACACA chr14:101942564-101942567 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_101942564_CACA/-/CACACA chr14:101942564-101942567 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_102010234_A/- chr14:102010234 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_102453424_TGTG/- chr14:102453424-102453427 - ENSMUSG00000115696.1 ENSMUST00000228104.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103328063_GTGT/-/GT chr14:103328063-103328066 - ENSMUSG00000033004.15 ENSMUST00000159855.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103328063_GTGT/-/GT chr14:103328063-103328066 GT ENSMUSG00000033004.15 ENSMUST00000159855.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103328063_GTGT/-/GT chr14:103328063-103328066 - ENSMUSG00000033004.15 ENSMUST00000160758.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103328063_GTGT/-/GT chr14:103328063-103328066 GT ENSMUSG00000033004.15 ENSMUST00000160758.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103328063_GTGT/-/GT chr14:103328063-103328066 - ENSMUSG00000033004.15 ENSMUST00000162537.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103328063_GTGT/-/GT chr14:103328063-103328066 GT ENSMUSG00000033004.15 ENSMUST00000162537.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103815872_AA/- chr14:103815872-103815873 - ENSMUSG00000022122.15 ENSMUST00000022718.10 Transcript 3_prime_UTR_variant 2859-2860 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103815872_AA/- chr14:103815872-103815873 - ENSMUSG00000022122.15 ENSMUST00000172237.1 Transcript 3_prime_UTR_variant 2742-2743 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103815872_AA/- chr14:103815872-103815873 - ENSMUSG00000022122.15 ENSMUST00000227824.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_103898187_ACAC/- chr14:103898187-103898190 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_104588825_T/C chr14:104588825 C ENSMUSG00000077541.1 ENSMUST00000104353.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2269;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_105577588_TT/-/T chr14:105577588-105577589 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_105577588_TT/-/T chr14:105577588-105577589 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_107030050_TGTGTG/- chr14:107030050-107030055 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_108317402_-/AAAAAAAAAAA chr14:108317401-108317402 AAAAAAAAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_108423880_ACAC/- chr14:108423880-108423883 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_108671402_A/T chr14:108671402 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_108969873_ACACACACACACACACACACACAA/- chr14:108969873-108969896 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_110489259_AGAG/-/AG chr14:110489259-110489262 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_110489259_AGAG/-/AG chr14:110489259-110489262 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_110675075_C/T chr14:110675075 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_111309017_-/ATCT chr14:111309016-111309017 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_111918036_A/G chr14:111918036 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_111960172_-/CTAT chr14:111960171-111960172 CTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_112172471_-/AAG chr14:112172470-112172471 AAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_112253912_-/TTTTTTTTTCTATTTTTTTTTTTTCC chr14:112253911-112253912 TTTTTTTTTCTATTTTTTTTTTTTCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_113191003_G/T chr14:113191003 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_113539015_G/- chr14:113539015 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_113539382_G/A chr14:113539382 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_113539400_T/A chr14:113539400 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_113708050_ATAT/- chr14:113708050-113708053 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_113754777_A/C chr14:113754777 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_114434475_CAT/C/TAT chr14:114434475-114434477 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_114434475_CAT/C/TAT chr14:114434475-114434477 TAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_114942864_-/A chr14:114942863-114942864 A ENSMUSG00000115372.1 ENSMUST00000226612.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_114942864_-/A chr14:114942863-114942864 A ENSMUSG00000115372.1 ENSMUST00000227125.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_114942864_-/A chr14:114942863-114942864 A ENSMUSG00000114979.1 ENSMUST00000227718.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3161;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_114942864_-/A chr14:114942863-114942864 A ENSMUSG00000115372.1 ENSMUST00000227763.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_114942864_-/A chr14:114942863-114942864 A ENSMUSG00000115372.1 ENSMUST00000227825.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_114942864_-/A chr14:114942863-114942864 A ENSMUSG00000114979.1 ENSMUST00000227840.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3135;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_114999825_TGTG/- chr14:114999825-114999828 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_115965001_A/G chr14:115965001 G ENSMUSG00000022112.14 ENSMUST00000022707.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_115965001_A/G chr14:115965001 G ENSMUSG00000022112.14 ENSMUST00000176912.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_115980633_GTGT/- chr14:115980633-115980636 - ENSMUSG00000022112.14 ENSMUST00000022707.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_115980633_GTGT/- chr14:115980633-115980636 - ENSMUSG00000022112.14 ENSMUST00000176912.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_115988567_TCTC/- chr14:115988567-115988570 - ENSMUSG00000022112.14 ENSMUST00000022707.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_115988567_TCTC/- chr14:115988567-115988570 - ENSMUSG00000022112.14 ENSMUST00000176912.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_116544171_A/T chr14:116544171 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_116788555_G/C chr14:116788555 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_117245195_AA/- chr14:117245195-117245196 - ENSMUSG00000058571.11 ENSMUST00000078849.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_117245195_AA/- chr14:117245195-117245196 - ENSMUSG00000058571.11 ENSMUST00000088483.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_117245195_AA/- chr14:117245195-117245196 - ENSMUSG00000058571.11 ENSMUST00000123239.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_117245195_AA/- chr14:117245195-117245196 - ENSMUSG00000058571.11 ENSMUST00000125435.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_118374640_A/- chr14:118374640 - ENSMUSG00000096997.1 ENSMUST00000180942.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_118374640_A/- chr14:118374640 - ENSMUSG00000099911.1 ENSMUST00000186060.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_118374640_A/- chr14:118374640 - ENSMUSG00000115515.1 ENSMUST00000226188.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=621;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_119515186_TATA/-/TATATA chr14:119515186-119515189 - ENSMUSG00000053465.6 ENSMUST00000065904.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_119515186_TATA/-/TATATA chr14:119515186-119515189 TATATA ENSMUSG00000053465.6 ENSMUST00000065904.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_119774549_A/C chr14:119774549 C ENSMUSG00000053465.6 ENSMUST00000065904.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_120850543_TATA/-/TA chr14:120850543-120850546 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_120850543_TATA/-/TA chr14:120850543-120850546 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr14_120913468_AA/- chr14:120913468-120913469 - ENSMUSG00000030662.10 ENSMUST00000032898.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_120913468_AA/- chr14:120913468-120913469 - ENSMUSG00000030662.10 ENSMUST00000227270.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_120913468_AA/- chr14:120913468-120913469 - ENSMUSG00000030662.10 ENSMUST00000228277.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2378;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_121483032_TCTA/- chr14:121483032-121483035 - ENSMUSG00000025557.10 ENSMUST00000088386.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_121483032_TCTA/- chr14:121483032-121483035 - ENSMUSG00000025557.10 ENSMUST00000227372.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122339856_AA/-/A chr14:122339856-122339857 - ENSMUSG00000025545.10 ENSMUST00000026625.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122339856_AA/-/A chr14:122339856-122339857 A ENSMUSG00000025545.10 ENSMUST00000026625.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122339856_AA/-/A chr14:122339856-122339857 - ENSMUSG00000025545.10 ENSMUST00000226136.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122339856_AA/-/A chr14:122339856-122339857 A ENSMUSG00000025545.10 ENSMUST00000226136.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122630308_C/A chr14:122630308 A ENSMUSG00000041650.15 ENSMUST00000038374.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122630308_C/A chr14:122630308 A ENSMUSG00000041650.15 ENSMUST00000135578.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122630308_C/A chr14:122630308 A ENSMUSG00000041650.15 ENSMUST00000143240.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_122630308_C/A chr14:122630308 A ENSMUSG00000041650.15 ENSMUST00000177312.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_123754872_TT/- chr14:123754872-123754873 - ENSMUSG00000032925.16 ENSMUST00000049681.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_123754872_TT/- chr14:123754872-123754873 - ENSMUSG00000032925.16 ENSMUST00000132026.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_123754872_TT/- chr14:123754872-123754873 - ENSMUSG00000032925.16 ENSMUST00000142161.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_123793314_G/C chr14:123793314 C ENSMUSG00000032925.16 ENSMUST00000049681.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_123793314_G/C chr14:123793314 C ENSMUSG00000032925.16 ENSMUST00000132026.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_123793314_G/C chr14:123793314 C ENSMUSG00000032925.16 ENSMUST00000142161.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr14_124284368_-/C chr14:124284367-124284368 C ENSMUSG00000025551.13 ENSMUST00000095529.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_4517964_GAGA/- chr15:4517964-4517967 - ENSMUSG00000049148.8 ENSMUST00000061925.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_4517964_GAGA/- chr15:4517964-4517967 - ENSMUSG00000049148.8 ENSMUST00000130332.1 Transcript non_coding_transcript_exon_variant 1762-1765 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_5344300_TT/- chr15:5344300-5344301 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_6837600_G/A chr15:6837600 A ENSMUSG00000022146.12 ENSMUST00000022746.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_6837600_G/A chr15:6837600 A ENSMUSG00000022146.12 ENSMUST00000175862.7 Transcript non_coding_transcript_exon_variant 1294 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_6837600_G/A chr15:6837600 A ENSMUSG00000022146.12 ENSMUST00000176826.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_7118443_T/C chr15:7118443 C ENSMUSG00000054263.12 ENSMUST00000228723.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_8522892_GT/- chr15:8522892-8522893 - ENSMUSG00000095663.1 ENSMUST00000179217.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2939;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_8522892_GT/- chr15:8522892-8522893 - ENSMUSG00000115480.1 ENSMUST00000227558.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_8670140_GAGA/- chr15:8670140-8670143 - ENSMUSG00000005360.14 ENSMUST00000005493.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_8752801_TTT/-/TTTT chr15:8752801-8752803 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_8752801_TTT/-/TTTT chr15:8752801-8752803 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_9221967_C/A chr15:9221967 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_9591851_G/T chr15:9591851 T ENSMUSG00000072663.12 ENSMUST00000160236.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_9886062_AGAG/- chr15:9886062-9886065 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_10141466_A/G chr15:10141466 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_10685147_-/CACA chr15:10685146-10685147 CACA ENSMUSG00000022246.14 ENSMUST00000090339.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_10685147_-/CACA chr15:10685146-10685147 CACA ENSMUSG00000022246.14 ENSMUST00000169385.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_10685147_-/CACA chr15:10685146-10685147 CACA ENSMUSG00000022246.14 ENSMUST00000226530.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_10685147_-/CACA chr15:10685146-10685147 CACA ENSMUSG00000022246.14 ENSMUST00000227366.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4144;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_10685147_-/CACA chr15:10685146-10685147 CACA ENSMUSG00000022246.14 ENSMUST00000227464.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_10685147_-/CACA chr15:10685146-10685147 CACA ENSMUSG00000022246.14 ENSMUST00000227506.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_11929534_C/T chr15:11929534 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_12442206_A/- chr15:12442206 - ENSMUSG00000022197.16 ENSMUST00000075317.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_12442206_A/- chr15:12442206 - ENSMUSG00000022197.16 ENSMUST00000189469.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1125;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_12442206_A/- chr15:12442206 - ENSMUSG00000022197.16 ENSMUST00000190929.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_12891125_GTGT/- chr15:12891125-12891128 - ENSMUSG00000022191.16 ENSMUST00000090292.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_12891125_GTGT/- chr15:12891125-12891128 - ENSMUSG00000022191.16 ENSMUST00000150211.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_12891125_GTGT/- chr15:12891125-12891128 - ENSMUSG00000022191.16 ENSMUST00000169061.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_13083163_TT/-/TTT chr15:13083163-13083164 - ENSMUSG00000039385.5 ENSMUST00000036439.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_13083163_TT/-/TTT chr15:13083163-13083164 TTT ENSMUSG00000039385.5 ENSMUST00000036439.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_13083163_TT/-/TTT chr15:13083163-13083164 - ENSMUSG00000039385.5 ENSMUST00000226917.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_13083163_TT/-/TTT chr15:13083163-13083164 TTT ENSMUSG00000039385.5 ENSMUST00000226917.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_13362432_GTGTGT/- chr15:13362432-13362437 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_13763935_GAGAGAGAGAGAGAGAGGGAGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGGGAGAGG/- chr15:13763935-13764036 - ENSMUSG00000115419.1 ENSMUST00000226118.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2908;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_15322345_CACA/-/CA chr15:15322345-15322348 - ENSMUSG00000114972.1 ENSMUST00000226279.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2431;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_15322345_CACA/-/CA chr15:15322345-15322348 CA ENSMUSG00000114972.1 ENSMUST00000226279.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2431;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_15511986_TT/-/TTT chr15:15511986-15511987 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_15511986_TT/-/TTT chr15:15511986-15511987 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_15513946_CACA/-/CA chr15:15513946-15513949 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_15513946_CACA/-/CA chr15:15513946-15513949 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_15557700_GTGT/- chr15:15557700-15557703 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_15755562_ACAC/- chr15:15755562-15755565 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_15768340_A/- chr15:15768340 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_16812324_C/T chr15:16812324 T ENSMUSG00000025370.7 ENSMUST00000026432.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_16812324_C/T chr15:16812324 T ENSMUSG00000025370.7 ENSMUST00000228307.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_17074136_AC/- chr15:17074136-17074137 - ENSMUSG00000115182.1 ENSMUST00000227358.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_17099987_-/CTTT chr15:17099986-17099987 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_17469604_G/A chr15:17469604 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_17609164_TT/- chr15:17609164-17609165 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_18023948_TGTG/- chr15:18023948-18023951 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_18185180_C/T chr15:18185180 T ENSMUSG00000098150.2 ENSMUST00000183117.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18185180_C/T chr15:18185180 T ENSMUSG00000098150.2 ENSMUST00000226383.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18185180_C/T chr15:18185180 T ENSMUSG00000098150.2 ENSMUST00000227364.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18279490_AA/-/AAA chr15:18279490-18279491 - ENSMUSG00000098150.2 ENSMUST00000226383.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18279490_AA/-/AAA chr15:18279490-18279491 AAA ENSMUSG00000098150.2 ENSMUST00000226383.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18279490_AA/-/AAA chr15:18279490-18279491 - ENSMUSG00000098150.2 ENSMUST00000227364.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18279490_AA/-/AAA chr15:18279490-18279491 AAA ENSMUSG00000098150.2 ENSMUST00000227364.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18514838_AAA/-/AA chr15:18514838-18514840 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_18514838_AAA/-/AA chr15:18514838-18514840 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_18731461_C/A chr15:18731461 A ENSMUSG00000084873.3 ENSMUST00000150382.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_18731463_T/C chr15:18731463 C ENSMUSG00000084873.3 ENSMUST00000150382.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_19020607_TT/-/T chr15:19020607-19020608 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_19020607_TT/-/T chr15:19020607-19020608 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_19663260_TT/-/TTT chr15:19663260-19663261 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_19663260_TT/-/TTT chr15:19663260-19663261 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_19841356_GG/- chr15:19841356-19841357 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_20267808_TT/-/T chr15:20267808-20267809 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_20267808_TT/-/T chr15:20267808-20267809 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_20480827_C/G chr15:20480827 G ENSMUSG00000040452.9 ENSMUST00000226407.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20480827_C/G chr15:20480827 G ENSMUSG00000115122.1 ENSMUST00000227439.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20480827_C/G chr15:20480827 G ENSMUSG00000115122.1 ENSMUST00000228652.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20633528_A/G chr15:20633528 G ENSMUSG00000040452.9 ENSMUST00000226407.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20633528_A/G chr15:20633528 G ENSMUSG00000115122.1 ENSMUST00000227439.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20633528_A/G chr15:20633528 G ENSMUSG00000115122.1 ENSMUST00000228652.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 - ENSMUSG00000047565.5 ENSMUST00000052910.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=61;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 A ENSMUSG00000047565.5 ENSMUST00000052910.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=61;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 - ENSMUSG00000040452.9 ENSMUST00000226407.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 A ENSMUSG00000040452.9 ENSMUST00000226407.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 - ENSMUSG00000115122.1 ENSMUST00000227439.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 A ENSMUSG00000115122.1 ENSMUST00000227439.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 - ENSMUSG00000115122.1 ENSMUST00000228652.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_20665152_AA/-/A chr15:20665152-20665153 A ENSMUSG00000115122.1 ENSMUST00000228652.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_21397790_G/A chr15:21397790 A ENSMUSG00000040452.9 ENSMUST00000075132.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_21397790_G/A chr15:21397790 A ENSMUSG00000040452.9 ENSMUST00000227496.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_21397802_G/A chr15:21397802 A ENSMUSG00000040452.9 ENSMUST00000075132.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_21397802_G/A chr15:21397802 A ENSMUSG00000040452.9 ENSMUST00000227496.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_22733994_AAAGA/- chr15:22733994-22733998 - ENSMUSG00000040420.15 ENSMUST00000163361.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_22851365_TT/- chr15:22851365-22851366 - ENSMUSG00000040420.15 ENSMUST00000163361.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23201092_ACAC/- chr15:23201092-23201095 - ENSMUSG00000040420.15 ENSMUST00000040427.13 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23201092_ACAC/- chr15:23201092-23201095 - ENSMUSG00000040420.15 ENSMUST00000163361.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23201092_ACAC/- chr15:23201092-23201095 - ENSMUSG00000040420.15 ENSMUST00000164787.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23201092_ACAC/- chr15:23201092-23201095 - ENSMUSG00000040420.15 ENSMUST00000165614.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23201092_ACAC/- chr15:23201092-23201095 - ENSMUSG00000040420.15 ENSMUST00000167623.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23201092_ACAC/- chr15:23201092-23201095 - ENSMUSG00000040420.15 ENSMUST00000226693.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23468699_CC/- chr15:23468699-23468700 - ENSMUSG00000040420.15 ENSMUST00000164787.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23468699_CC/- chr15:23468699-23468700 - ENSMUSG00000040420.15 ENSMUST00000165614.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23468699_CC/- chr15:23468699-23468700 - ENSMUSG00000040420.15 ENSMUST00000167623.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23468699_CC/- chr15:23468699-23468700 - ENSMUSG00000040420.15 ENSMUST00000226693.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_23902112_TT/- chr15:23902112-23902113 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_24521133_AAAG/- chr15:24521133-24521136 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_24682789_T/- chr15:24682789 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_24874064_ACAC/- chr15:24874064-24874067 - ENSMUSG00000115261.1 ENSMUST00000228215.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_24898435_GG/TT chr15:24898435-24898436 TT ENSMUSG00000115261.1 ENSMUST00000228215.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_24968205_C/T chr15:24968205 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_24968207_T/C chr15:24968207 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_25132391_AGAG/-/AG chr15:25132391-25132394 - ENSMUSG00000115174.1 ENSMUST00000226274.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25132391_AGAG/-/AG chr15:25132391-25132394 AG ENSMUSG00000115174.1 ENSMUST00000226274.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25289026_ACAC/- chr15:25289026-25289029 - ENSMUSG00000115355.1 ENSMUST00000226199.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000045763.8 ENSMUST00000058845.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000056089.6 ENSMUST00000069992.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2203;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000115850.1 ENSMUST00000226289.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2648;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000115729.1 ENSMUST00000226401.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3074;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000115729.1 ENSMUST00000226957.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3062;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000115729.1 ENSMUST00000227204.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3033;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000056089.6 ENSMUST00000227851.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2203;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000115729.1 ENSMUST00000228425.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3069;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_25411988_TT/- chr15:25411988-25411989 - ENSMUSG00000045763.8 ENSMUST00000228597.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_26137137_C/T chr15:26137137 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_26774040_A/C chr15:26774040 C ENSMUSG00000043556.10 ENSMUST00000059204.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_26774044_TACT/- chr15:26774044-26774047 - ENSMUSG00000043556.10 ENSMUST00000059204.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_26984778_T/C chr15:26984778 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_27130954_ACAC/-/AC chr15:27130954-27130957 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_27130954_ACAC/-/AC chr15:27130954-27130957 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_27397175_A/G chr15:27397175 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_27397189_TG/CA chr15:27397189-27397190 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_27778565_GTGT/- chr15:27778565-27778568 - ENSMUSG00000022263.10 ENSMUST00000090247.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_27778565_GTGT/- chr15:27778565-27778568 - ENSMUSG00000022263.10 ENSMUST00000226287.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_27778565_GTGT/- chr15:27778565-27778568 - ENSMUSG00000022263.10 ENSMUST00000226644.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_27778565_GTGT/- chr15:27778565-27778568 - ENSMUSG00000022263.10 ENSMUST00000227337.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_27914703_A/T chr15:27914703 T ENSMUSG00000022263.10 ENSMUST00000090247.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_27914703_A/T chr15:27914703 T ENSMUSG00000022263.10 ENSMUST00000226775.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_27914703_A/T chr15:27914703 T ENSMUSG00000022263.10 ENSMUST00000227337.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_27914703_A/T chr15:27914703 T ENSMUSG00000022263.10 ENSMUST00000228950.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4430;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_28538227_TGTG/- chr15:28538227-28538230 - ENSMUSG00000115156.1 ENSMUST00000226803.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1984;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_28563405_ATCT/- chr15:28563405-28563408 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_28982409_T/A chr15:28982409 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_28982608_A/T chr15:28982608 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_29297946_C/T chr15:29297946 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_29752683_-/GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT chr15:29752682-29752683 GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_29983921_G/A chr15:29983921 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_30136633_A/G chr15:30136633 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_30773251_GTGT/-/GT chr15:30773251-30773254 - ENSMUSG00000022240.10 ENSMUST00000081728.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_30773251_GTGT/-/GT chr15:30773251-30773254 GT ENSMUSG00000022240.10 ENSMUST00000081728.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_30773251_GTGT/-/GT chr15:30773251-30773254 - ENSMUSG00000022240.10 ENSMUST00000226119.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_30773251_GTGT/-/GT chr15:30773251-30773254 GT ENSMUSG00000022240.10 ENSMUST00000226119.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_30773251_GTGT/-/GT chr15:30773251-30773254 - ENSMUSG00000022240.10 ENSMUST00000227065.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_30773251_GTGT/-/GT chr15:30773251-30773254 GT ENSMUSG00000022240.10 ENSMUST00000227065.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31110386_CTCTCT/-/CT/CTCT chr15:31110386-31110391 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_31110386_CTCTCT/-/CT/CTCT chr15:31110386-31110391 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_31110386_CTCTCT/-/CT/CTCT chr15:31110386-31110391 CTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_31269907_GTGT/- chr15:31269907-31269910 - ENSMUSG00000039168.15 ENSMUST00000044524.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31269907_GTGT/- chr15:31269907-31269910 - ENSMUSG00000039168.15 ENSMUST00000185618.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31269907_GTGT/- chr15:31269907-31269910 - ENSMUSG00000039168.15 ENSMUST00000186109.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31269907_GTGT/- chr15:31269907-31269910 - ENSMUSG00000039168.15 ENSMUST00000186425.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31269907_GTGT/- chr15:31269907-31269910 - ENSMUSG00000039168.15 ENSMUST00000186547.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31366739_CACA/- chr15:31366739-31366742 - ENSMUSG00000022237.17 ENSMUST00000044324.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31366739_CACA/- chr15:31366739-31366742 - ENSMUSG00000022237.17 ENSMUST00000076942.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31366739_CACA/- chr15:31366739-31366742 - ENSMUSG00000022237.17 ENSMUST00000110410.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31366739_CACA/- chr15:31366739-31366742 - ENSMUSG00000022237.17 ENSMUST00000123325.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31366739_CACA/- chr15:31366739-31366742 - ENSMUSG00000022237.17 ENSMUST00000156679.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31366739_CACA/- chr15:31366739-31366742 - ENSMUSG00000115406.1 ENSMUST00000227460.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1620;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31627698_T/- chr15:31627698 - ENSMUSG00000114995.1 ENSMUST00000227896.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3663;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_31696840_-/CTTC chr15:31696839-31696840 CTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_31840501_ATAT/- chr15:31840501-31840504 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_33096737_TCTA/- chr15:33096737-33096740 - ENSMUSG00000039007.10 ENSMUST00000042167.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_33096737_TCTA/- chr15:33096737-33096740 - ENSMUSG00000039007.10 ENSMUST00000226483.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_33096737_TCTA/- chr15:33096737-33096740 - ENSMUSG00000039007.10 ENSMUST00000226814.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_33096737_TCTA/- chr15:33096737-33096740 - ENSMUSG00000039007.10 ENSMUST00000226896.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_33096737_TCTA/- chr15:33096737-33096740 - ENSMUSG00000039007.10 ENSMUST00000228737.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_33096737_TCTA/- chr15:33096737-33096740 - ENSMUSG00000039007.10 ENSMUST00000228916.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_33887960_AA/- chr15:33887960-33887961 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_34374347_-/AAGA chr15:34374346-34374347 AAGA ENSMUSG00000022324.15 ENSMUST00000022947.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_34374347_-/AAGA chr15:34374346-34374347 AAGA ENSMUSG00000022324.15 ENSMUST00000163455.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_34374347_-/AAGA chr15:34374346-34374347 AAGA ENSMUSG00000022324.15 ENSMUST00000227759.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_34374347_-/AAGA chr15:34374346-34374347 AAGA ENSMUSG00000022324.15 ENSMUST00000228570.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_35015063_T/C chr15:35015063 C ENSMUSG00000022329.15 ENSMUST00000018476.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_35015063_T/C chr15:35015063 C ENSMUSG00000022329.15 ENSMUST00000067033.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_35015063_T/C chr15:35015063 C ENSMUSG00000022329.15 ENSMUST00000226555.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_35470297_-/AA chr15:35470296-35470297 AA ENSMUSG00000037646.10 ENSMUST00000048646.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_35470297_-/AA chr15:35470296-35470297 AA ENSMUSG00000037646.10 ENSMUST00000226579.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36202525_G/C chr15:36202525 C ENSMUSG00000037617.12 ENSMUST00000047348.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36202525_G/C chr15:36202525 C ENSMUSG00000088201.1 ENSMUST00000157576.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2735;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36202525_G/C chr15:36202525 C ENSMUSG00000037617.12 ENSMUST00000171205.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36202525_G/C chr15:36202525 C ENSMUSG00000115811.1 ENSMUST00000227302.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3849;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36202525_G/C chr15:36202525 C ENSMUSG00000037617.12 ENSMUST00000227524.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36250491_TT/-/T chr15:36250491-36250492 - ENSMUSG00000022280.9 ENSMUST00000022890.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36250491_TT/-/T chr15:36250491-36250492 T ENSMUSG00000022280.9 ENSMUST00000022890.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36250491_TT/-/T chr15:36250491-36250492 - ENSMUSG00000022280.9 ENSMUST00000228358.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36250491_TT/-/T chr15:36250491-36250492 T ENSMUSG00000022280.9 ENSMUST00000228358.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_36324177_GTGT/- chr15:36324177-36324180 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_37113232_-/TTTC chr15:37113231-37113232 TTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_37764272_GTGTGTGTGTGTGTGGAGTGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTGTGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGTGTGTATGTATGTGTGTGTGTGTAGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTATGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGCGTGTGT/- chr15:37764272-37764500 - ENSMUSG00000051359.15 ENSMUST00000090150.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37764272_GTGTGTGTGTGTGTGGAGTGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTGTGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGTGTGTATGTATGTGTGTGTGTGTAGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTATGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGCGTGTGT/- chr15:37764272-37764500 - ENSMUSG00000051359.15 ENSMUST00000123317.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37764272_GTGTGTGTGTGTGTGGAGTGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTGTGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGTGTGTATGTATGTGTGTGTGTGTAGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTATGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGCGTGTGT/- chr15:37764272-37764500 - ENSMUSG00000051359.15 ENSMUST00000148652.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37764272_GTGTGTGTGTGTGTGGAGTGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTGTGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGTGTGTATGTATGTGTGTGTGTGTAGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTATGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGCGTGTGT/- chr15:37764272-37764500 - ENSMUSG00000051359.15 ENSMUST00000150453.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37764272_GTGTGTGTGTGTGTGGAGTGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTGTGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGTGTGTATGTATGTGTGTGTGTGTAGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTATGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGCGTGTGT/- chr15:37764272-37764500 - ENSMUSG00000086313.1 ENSMUST00000156011.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37764272_GTGTGTGTGTGTGTGGAGTGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTGTGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGTGTGTATGTATGTGTGTGTGTGTAGTGTGTGTGTCTATGTGTGTGTCTGTGTGGAGTGTATGTGTGTAGAGTGTGTGTGTGTAGAGTGTATTGTGTAGTGCGTGTGT/- chr15:37764272-37764500 - ENSMUSG00000051359.15 ENSMUST00000168992.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000022292.16 ENSMUST00000022901.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000022292.16 ENSMUST00000127362.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4518;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000022292.16 ENSMUST00000137636.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000022292.16 ENSMUST00000144498.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000022292.16 ENSMUST00000145175.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4623;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000022292.16 ENSMUST00000146821.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000085442.1 ENSMUST00000148102.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2797;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_37940525_CACACA/- chr15:37940525-37940530 - ENSMUSG00000022292.16 ENSMUST00000153481.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38169114_TATA/- chr15:38169114-38169117 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000065308.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000110328.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000110329.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000127848.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1187;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000129589.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000149293.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1858;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000151319.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38499246_ACAC/- chr15:38499246-38499249 - ENSMUSG00000037458.15 ENSMUST00000226152.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4860;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38670800_AGAG/- chr15:38670800-38670803 - ENSMUSG00000022295.8 ENSMUST00000022904.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38670800_AGAG/- chr15:38670800-38670803 - ENSMUSG00000022295.8 ENSMUST00000226487.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38670800_AGAG/- chr15:38670800-38670803 - ENSMUSG00000022295.8 ENSMUST00000226533.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38670800_AGAG/- chr15:38670800-38670803 - ENSMUSG00000022295.8 ENSMUST00000227482.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4886;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38670800_AGAG/- chr15:38670800-38670803 - ENSMUSG00000022295.8 ENSMUST00000228475.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38670800_AGAG/- chr15:38670800-38670803 - ENSMUSG00000022295.8 ENSMUST00000228486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38670800_AGAG/- chr15:38670800-38670803 - ENSMUSG00000022295.8 ENSMUST00000228820.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_38701373_G/A chr15:38701373 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_39888475_ACAC/-/AC chr15:39888475-39888478 - ENSMUSG00000022305.13 ENSMUST00000022916.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_39888475_ACAC/-/AC chr15:39888475-39888478 AC ENSMUSG00000022305.13 ENSMUST00000022916.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_39888475_ACAC/-/AC chr15:39888475-39888478 - ENSMUSG00000022305.13 ENSMUST00000110305.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_39888475_ACAC/-/AC chr15:39888475-39888478 AC ENSMUSG00000022305.13 ENSMUST00000110305.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_39888475_ACAC/-/AC chr15:39888475-39888478 - ENSMUSG00000022305.13 ENSMUST00000228575.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_39888475_ACAC/-/AC chr15:39888475-39888478 AC ENSMUSG00000022305.13 ENSMUST00000228575.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_40104816_ACAC/- chr15:40104816-40104819 - ENSMUSG00000115142.1 ENSMUST00000227360.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_40187562_ACAC/- chr15:40187562-40187565 - ENSMUSG00000092855.1 ENSMUST00000175114.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1463;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_41729861_T/C chr15:41729861 C ENSMUSG00000022307.16 ENSMUST00000090096.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_41729861_T/C chr15:41729861 C ENSMUSG00000022307.16 ENSMUST00000110297.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_41729861_T/C chr15:41729861 C ENSMUSG00000022307.16 ENSMUST00000179393.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_41729861_T/C chr15:41729861 C ENSMUSG00000022307.16 ENSMUST00000229769.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_41729861_T/C chr15:41729861 C ENSMUSG00000022307.16 ENSMUST00000230203.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_41925737_TT/-/T chr15:41925737-41925738 - ENSMUSG00000116083.1 ENSMUST00000229137.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2586;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_41925737_TT/-/T chr15:41925737-41925738 T ENSMUSG00000116083.1 ENSMUST00000229137.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2586;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_42626359_GTGTGT/- chr15:42626359-42626364 - ENSMUSG00000022309.9 ENSMUST00000022921.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_42855592_AA/- chr15:42855592-42855593 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_43112233_AA/- chr15:43112233-43112234 - ENSMUSG00000051920.7 ENSMUST00000063492.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_43112233_AA/- chr15:43112233-43112234 - ENSMUSG00000051920.7 ENSMUST00000226402.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_43112233_AA/- chr15:43112233-43112234 - ENSMUSG00000051920.7 ENSMUST00000226810.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_43420572_ATAT/- chr15:43420572-43420575 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_43900389_ACAC/- chr15:43900389-43900392 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000090057.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000110267.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000110269.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000226214.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000226825.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000227081.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000227305.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_44689067_TTTTT/- chr15:44689067-44689071 - ENSMUSG00000022340.15 ENSMUST00000228057.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_45167920_TTAT/- chr15:45167920-45167923 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_45748774_TCTC/- chr15:45748774-45748777 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_45751088_TT/- chr15:45751088-45751089 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_46117298_AC/- chr15:46117298-46117299 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_46267702_ATAT/- chr15:46267702-46267705 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_46504092_C/T chr15:46504092 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_46504101_G/A chr15:46504101 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_47315479_T/G chr15:47315479 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_47315485_A/C chr15:47315485 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_47703429_CC/- chr15:47703429-47703430 - ENSMUSG00000022311.15 ENSMUST00000100670.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47703429_CC/- chr15:47703429-47703430 - ENSMUSG00000089828.2 ENSMUST00000160031.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47703429_CC/- chr15:47703429-47703430 - ENSMUSG00000022311.15 ENSMUST00000160658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47703429_CC/- chr15:47703429-47703430 - ENSMUSG00000022311.15 ENSMUST00000161653.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47703429_CC/- chr15:47703429-47703430 - ENSMUSG00000022311.15 ENSMUST00000162830.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47767218_C/T chr15:47767218 T ENSMUSG00000022311.15 ENSMUST00000100670.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47767218_C/T chr15:47767218 T ENSMUSG00000022311.15 ENSMUST00000160658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47767218_C/T chr15:47767218 T ENSMUSG00000022311.15 ENSMUST00000161653.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_47767218_C/T chr15:47767218 T ENSMUSG00000022311.15 ENSMUST00000162830.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 - ENSMUSG00000022311.15 ENSMUST00000100670.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 AAA ENSMUSG00000022311.15 ENSMUST00000100670.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 - ENSMUSG00000022311.15 ENSMUST00000160655.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 AAA ENSMUSG00000022311.15 ENSMUST00000160655.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 - ENSMUSG00000022311.15 ENSMUST00000160658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 AAA ENSMUSG00000022311.15 ENSMUST00000160658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 - ENSMUSG00000022311.15 ENSMUST00000160716.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 AAA ENSMUSG00000022311.15 ENSMUST00000160716.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 - ENSMUSG00000022311.15 ENSMUST00000162830.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48369429_AA/-/AAA chr15:48369429-48369430 AAA ENSMUSG00000022311.15 ENSMUST00000162830.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48769731_TGTG/- chr15:48769731-48769734 - ENSMUSG00000022311.15 ENSMUST00000100670.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48769731_TGTG/- chr15:48769731-48769734 - ENSMUSG00000022311.15 ENSMUST00000160655.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48769731_TGTG/- chr15:48769731-48769734 - ENSMUSG00000022311.15 ENSMUST00000160658.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48769731_TGTG/- chr15:48769731-48769734 - ENSMUSG00000022311.15 ENSMUST00000160716.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_48769731_TGTG/- chr15:48769731-48769734 - ENSMUSG00000022311.15 ENSMUST00000162830.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_49304842_T/C chr15:49304842 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_50516109_C/- chr15:50516109 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_50837927_AA/- chr15:50837927-50837928 - ENSMUSG00000038679.16 ENSMUST00000077935.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_50837927_AA/- chr15:50837927-50837928 - ENSMUSG00000038679.16 ENSMUST00000165201.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_50837927_AA/- chr15:50837927-50837928 - ENSMUSG00000038679.16 ENSMUST00000183757.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_50837927_AA/- chr15:50837927-50837928 - ENSMUSG00000038679.16 ENSMUST00000183997.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_50837927_AA/- chr15:50837927-50837928 - ENSMUSG00000038679.16 ENSMUST00000184458.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_50837927_AA/- chr15:50837927-50837928 - ENSMUSG00000038679.16 ENSMUST00000184885.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_51385972_-/AGAT chr15:51385971-51385972 AGAT ENSMUSG00000115654.1 ENSMUST00000226948.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_51503827_AAA/- chr15:51503827-51503829 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_51607451_A/G chr15:51607451 G ENSMUSG00000115563.1 ENSMUST00000227000.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_51918909_TTT/-/TT chr15:51918909-51918911 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_51918909_TTT/-/TT chr15:51918909-51918911 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_52065809_-/CTTT chr15:52065808-52065809 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_53394091_G/T chr15:53394091 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_53786740_TGTGTG/- chr15:53786740-53786745 - ENSMUSG00000058656.13 ENSMUST00000078673.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_53786740_TGTGTG/- chr15:53786740-53786745 - ENSMUSG00000058656.13 ENSMUST00000132059.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_53786740_TGTGTG/- chr15:53786740-53786745 - ENSMUSG00000058656.13 ENSMUST00000154119.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_53971694_CTAT/- chr15:53971694-53971697 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_53989156_TCTCTC/- chr15:53989156-53989161 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_55415150_TATC/- chr15:55415150-55415153 - ENSMUSG00000022371.16 ENSMUST00000023053.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_55415150_TATC/- chr15:55415150-55415153 - ENSMUSG00000022371.16 ENSMUST00000110217.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_55415150_TATC/- chr15:55415150-55415153 - ENSMUSG00000022371.16 ENSMUST00000110221.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_55652495_TT/-/TTT chr15:55652495-55652496 - ENSMUSG00000060429.12 ENSMUST00000039769.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_55652495_TT/-/TTT chr15:55652495-55652496 TTT ENSMUSG00000060429.12 ENSMUST00000039769.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_56065310_C/A chr15:56065310 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_56687227_-/ATCT chr15:56687226-56687227 ATCT ENSMUSG00000022367.7 ENSMUST00000050544.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_56687227_-/ATCT chr15:56687226-56687227 ATCT ENSMUSG00000086541.8 ENSMUST00000125401.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2717;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_56883804_TGTGTGTG/- chr15:56883804-56883811 - ENSMUSG00000115172.1 ENSMUST00000228364.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_57263116_ACAC/- chr15:57263116-57263119 - ENSMUSG00000022366.12 ENSMUST00000022995.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_57263116_ACAC/- chr15:57263116-57263119 - ENSMUSG00000022366.12 ENSMUST00000110196.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_57263116_ACAC/- chr15:57263116-57263119 - ENSMUSG00000022366.12 ENSMUST00000137764.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_57292938_A/C chr15:57292938 C ENSMUSG00000022366.12 ENSMUST00000110196.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_57664835_-/TGTGTGTG chr15:57664834-57664835 TGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_57820484_G/T chr15:57820484 T ENSMUSG00000071757.10 ENSMUST00000096430.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_57820484_G/T chr15:57820484 T ENSMUSG00000071757.10 ENSMUST00000160990.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58043369_-/G chr15:58043368-58043369 G ENSMUSG00000022361.14 ENSMUST00000070143.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3936;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58043369_-/G chr15:58043368-58043369 G ENSMUSG00000064597.1 ENSMUST00000082663.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1717;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58043369_-/G chr15:58043368-58043369 G ENSMUSG00000022361.14 ENSMUST00000110168.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3634;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58043369_-/G chr15:58043368-58043369 G ENSMUSG00000022361.14 ENSMUST00000175805.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3634;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58043369_-/G chr15:58043368-58043369 G ENSMUSG00000022362.13 ENSMUST00000176935.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58043369_-/G chr15:58043368-58043369 G ENSMUSG00000022362.13 ENSMUST00000177176.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58115623_AA/- chr15:58115623-58115624 - ENSMUSG00000022360.8 ENSMUST00000038194.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58115623_AA/- chr15:58115623-58115624 - ENSMUSG00000022360.8 ENSMUST00000226507.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3465;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58115623_AA/- chr15:58115623-58115624 - ENSMUSG00000022360.8 ENSMUST00000226526.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4280;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58115623_AA/- chr15:58115623-58115624 - ENSMUSG00000022360.8 ENSMUST00000227134.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=524;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58115623_AA/- chr15:58115623-58115624 - ENSMUSG00000022360.8 ENSMUST00000228783.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58404840_TTT/- chr15:58404840-58404842 - ENSMUSG00000115576.1 ENSMUST00000227769.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=982;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58595081_G/C chr15:58595081 C ENSMUSG00000037106.8 ENSMUST00000161028.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58980387_AA/- chr15:58980387-58980388 - ENSMUSG00000022353.10 ENSMUST00000080371.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58980387_AA/- chr15:58980387-58980388 - ENSMUSG00000115062.1 ENSMUST00000226216.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3748;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58980387_AA/- chr15:58980387-58980388 - ENSMUSG00000022353.10 ENSMUST00000226976.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_58980387_AA/- chr15:58980387-58980388 - ENSMUSG00000022353.10 ENSMUST00000228365.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_59186894_TGCAATGACTCT/- chr15:59186894-59186905 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_60328698_ATAT/-/ATATAT chr15:60328698-60328701 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_60328698_ATAT/-/ATATAT chr15:60328698-60328701 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_60354304_T/C chr15:60354304 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_61108665_ATAT/- chr15:61108665-61108668 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_61527169_AAA/- chr15:61527169-61527171 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_61609237_CTCT/-/CT chr15:61609237-61609240 - ENSMUSG00000116031.1 ENSMUST00000229538.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_61609237_CTCT/-/CT chr15:61609237-61609240 CT ENSMUSG00000116031.1 ENSMUST00000229538.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_61778956_GAA/- chr15:61778956-61778958 - ENSMUSG00000116031.1 ENSMUST00000230725.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4505;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_61854976_AA/- chr15:61854976-61854977 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_62787861_AA/-/A chr15:62787861-62787862 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_62787861_AA/-/A chr15:62787861-62787862 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_63167080_T/G chr15:63167080 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_63525576_GAGAGA/-/GAGA chr15:63525576-63525581 - ENSMUSG00000115520.2 ENSMUST00000228339.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_63525576_GAGAGA/-/GAGA chr15:63525576-63525581 GAGA ENSMUSG00000115520.2 ENSMUST00000228339.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_63705167_AA/-/A chr15:63705167-63705168 - ENSMUSG00000115520.2 ENSMUST00000228339.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_63705167_AA/-/A chr15:63705167-63705168 A ENSMUSG00000115520.2 ENSMUST00000228339.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_63859980_G/A chr15:63859980 A ENSMUSG00000055827.13 ENSMUST00000089894.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_63859980_G/A chr15:63859980 A ENSMUSG00000055827.13 ENSMUST00000185526.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_63859980_G/A chr15:63859980 A ENSMUSG00000055827.13 ENSMUST00000190682.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_63859980_G/A chr15:63859980 A ENSMUSG00000062543.8 ENSMUST00000190937.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4825;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64005111_TT/- chr15:64005111-64005112 - ENSMUSG00000022378.14 ENSMUST00000063838.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64005111_TT/- chr15:64005111-64005112 - ENSMUSG00000022378.14 ENSMUST00000226675.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64005111_TT/- chr15:64005111-64005112 - ENSMUSG00000022378.14 ENSMUST00000227024.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64005111_TT/- chr15:64005111-64005112 - ENSMUSG00000022378.14 ENSMUST00000228226.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64005111_TT/- chr15:64005111-64005112 - ENSMUSG00000022378.14 ENSMUST00000228908.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64401771_CACA/-/CA chr15:64401771-64401774 - ENSMUSG00000115169.1 ENSMUST00000226656.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64401771_CACA/-/CA chr15:64401771-64401774 CA ENSMUSG00000115169.1 ENSMUST00000226656.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64401771_CACA/-/CA chr15:64401771-64401774 - ENSMUSG00000115169.1 ENSMUST00000227720.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_64401771_CACA/-/CA chr15:64401771-64401774 CA ENSMUSG00000115169.1 ENSMUST00000227720.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_65737647_A/G chr15:65737647 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_66032939_ACAC/-/AC chr15:66032939-66032942 - ENSMUSG00000056258.9 ENSMUST00000070256.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66032939_ACAC/-/AC chr15:66032939-66032942 AC ENSMUSG00000056258.9 ENSMUST00000070256.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66032939_ACAC/-/AC chr15:66032939-66032942 - ENSMUSG00000056258.9 ENSMUST00000183354.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66032939_ACAC/-/AC chr15:66032939-66032942 AC ENSMUSG00000056258.9 ENSMUST00000183354.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66230440_ACAC/- chr15:66230440-66230443 - ENSMUSG00000056258.9 ENSMUST00000070256.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66485062_GACAG/- chr15:66485062-66485066 - ENSMUSG00000022375.6 ENSMUST00000023006.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66486573_ACACACAC/- chr15:66486573-66486580 - ENSMUSG00000022375.6 ENSMUST00000023006.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000048188.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000229160.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000229486.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=130;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000229576.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000229590.1 Transcript non_coding_transcript_exon_variant 2153-2156 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000230250.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000230882.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4588;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000230915.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_66616204_ACAC/- chr15:66616204-66616207 - ENSMUSG00000072501.5 ENSMUST00000230948.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_67219803_TCTC/- chr15:67219803-67219806 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_67410865_TT/- chr15:67410865-67410866 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_68030569_-/CC chr15:68030568-68030569 CC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_68244888_T/C chr15:68244888 C ENSMUSG00000022335.17 ENSMUST00000159430.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_68244888_T/C chr15:68244888 C ENSMUSG00000022335.17 ENSMUST00000160248.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_68244888_T/C chr15:68244888 C ENSMUSG00000022335.17 ENSMUST00000161139.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_68244888_T/C chr15:68244888 C ENSMUSG00000022335.17 ENSMUST00000162054.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_68244888_T/C chr15:68244888 C ENSMUSG00000022335.17 ENSMUST00000162173.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_68310331_AA/-/A chr15:68310331-68310332 - ENSMUSG00000068397.4 ENSMUST00000089785.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=30;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_68310331_AA/-/A chr15:68310331-68310332 A ENSMUSG00000068397.4 ENSMUST00000089785.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=30;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_68627851_T/A chr15:68627851 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_68787967_-/AAGA chr15:68787966-68787967 AAGA ENSMUSG00000069996.3 ENSMUST00000230796.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4353;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_69803851_CACA/-/CA chr15:69803851-69803854 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_69803851_CACA/-/CA chr15:69803851-69803854 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_69895788_A/T chr15:69895788 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_71018336_C/T chr15:71018336 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_71255843_-/TGTGTG chr15:71255842-71255843 TGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_71989231_GTGT/-/GT chr15:71989231-71989234 - ENSMUSG00000079022.10 ENSMUST00000159993.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_71989231_GTGT/-/GT chr15:71989231-71989234 GT ENSMUSG00000079022.10 ENSMUST00000159993.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_72403597_G/T chr15:72403597 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_72995642_-/A chr15:72995641-72995642 A ENSMUSG00000047921.16 ENSMUST00000023276.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_72995642_-/A chr15:72995641-72995642 A ENSMUSG00000047921.16 ENSMUST00000089770.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_72995642_-/A chr15:72995641-72995642 A ENSMUSG00000047921.16 ENSMUST00000168191.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_72995642_-/A chr15:72995641-72995642 A ENSMUSG00000047921.16 ENSMUST00000170633.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_72995642_-/A chr15:72995641-72995642 A ENSMUSG00000047921.16 ENSMUST00000228960.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_72995642_-/A chr15:72995641-72995642 A ENSMUSG00000047921.16 ENSMUST00000230025.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_72995642_-/A chr15:72995641-72995642 A ENSMUSG00000047921.16 ENSMUST00000230270.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_74283646_ACAC/- chr15:74283646-74283649 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_74315867_ATGG/- chr15:74315867-74315870 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_75845437_A/- chr15:75845437 - ENSMUSG00000075600.3 ENSMUST00000100538.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3522;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751635_A/T chr15:76751635 T ENSMUSG00000033697.15 ENSMUST00000036176.14 Transcript synonymous_variant 572 399 133 G ggT/ggA - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751635_A/T chr15:76751635 T ENSMUSG00000033697.15 ENSMUST00000077821.9 Transcript synonymous_variant 659 399 133 G ggT/ggA - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751635_A/T chr15:76751635 T ENSMUSG00000033697.15 ENSMUST00000176855.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=42;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751635_A/T chr15:76751635 T ENSMUSG00000033697.15 ENSMUST00000177011.1 Transcript non_coding_transcript_exon_variant 618 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751655_C/T chr15:76751655 T ENSMUSG00000033697.15 ENSMUST00000036176.14 Transcript missense_variant 552 379 127 G/R Ggg/Agg - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751655_C/T chr15:76751655 T ENSMUSG00000033697.15 ENSMUST00000077821.9 Transcript missense_variant 639 379 127 G/R Ggg/Agg - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751655_C/T chr15:76751655 T ENSMUSG00000033697.15 ENSMUST00000176855.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=22;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_76751655_C/T chr15:76751655 T ENSMUSG00000033697.15 ENSMUST00000177011.1 Transcript non_coding_transcript_exon_variant 598 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_77419555_A/C chr15:77419555 C ENSMUSG00000068252.6 ENSMUST00000089469.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2654;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_77419555_A/C chr15:77419555 C ENSMUSG00000068252.6 ENSMUST00000229434.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4175;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_78494138_ACAC/- chr15:78494138-78494141 - ENSMUSG00000068227.9 ENSMUST00000089398.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_78494138_ACAC/- chr15:78494138-78494141 - ENSMUSG00000068227.9 ENSMUST00000163494.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=382;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_78829647_-/TCTT chr15:78829646-78829647 TCTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000046816.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000109646.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000109648.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000187519.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000191401.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000229064.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000230366.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79647273_ACAC/- chr15:79647273-79647276 - ENSMUSG00000042564.13 ENSMUST00000231126.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2155;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79730355_-/AGA chr15:79730354-79730355 AGA ENSMUSG00000042524.14 ENSMUST00000046259.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79730355_-/AGA chr15:79730354-79730355 AGA ENSMUSG00000042524.14 ENSMUST00000089311.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79730355_-/AGA chr15:79730354-79730355 AGA ENSMUSG00000042524.14 ENSMUST00000100439.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79730355_-/AGA chr15:79730354-79730355 AGA ENSMUSG00000042524.14 ENSMUST00000159762.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79730355_-/AGA chr15:79730354-79730355 AGA ENSMUSG00000042524.14 ENSMUST00000162064.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3753;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79730355_-/AGA chr15:79730354-79730355 AGA ENSMUSG00000042524.14 ENSMUST00000162392.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79730355_-/AGA chr15:79730354-79730355 AGA ENSMUSG00000042524.14 ENSMUST00000231189.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000023054.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=531;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000023054.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=531;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000109620.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=8;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000109620.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=8;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000165537.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=8;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000165537.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=8;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000175714.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=519;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000175714.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=519;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000175752.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=351;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000175752.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=351;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000175801.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2519;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000175801.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2519;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000175827.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1346;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000175827.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1346;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000176325.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000176325.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000176644.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000176644.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000176868.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2945;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000176868.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2945;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000177006.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1068;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000177006.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1068;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000177098.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000177098.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000177350.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2890;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000177350.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2890;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000177483.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2837;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000177483.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2837;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000230135.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1958;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000230135.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1958;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 - ENSMUSG00000009585.18 ENSMUST00000230741.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2023;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_79908437_AA/-/A chr15:79908437-79908438 A ENSMUSG00000009585.18 ENSMUST00000230741.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2023;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_80056359_TGTG/-/TG chr15:80056359-80056362 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_80056359_TGTG/-/TG chr15:80056359-80056362 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_81236704_ACACAC/-/ACAC chr15:81236704-81236709 - ENSMUSG00000050164.11 ENSMUST00000166855.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81236704_ACACAC/-/ACAC chr15:81236704-81236709 ACAC ENSMUSG00000050164.11 ENSMUST00000166855.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81510427_G/T chr15:81510427 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_81846618_TCCTCC/- chr15:81846618-81846623 - ENSMUSG00000048546.8 ENSMUST00000050467.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1649;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81846618_TCCTCC/- chr15:81846618-81846623 - ENSMUSG00000069439.3 ENSMUST00000092020.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2905;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81887133_A/T chr15:81887133 T ENSMUSG00000022477.13 ENSMUST00000023116.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81887133_A/T chr15:81887133 T ENSMUSG00000022477.13 ENSMUST00000135198.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81887133_A/T chr15:81887133 T ENSMUSG00000022477.13 ENSMUST00000157003.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81887133_A/T chr15:81887133 T ENSMUSG00000022477.13 ENSMUST00000229068.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81887133_A/T chr15:81887133 T ENSMUSG00000022476.8 ENSMUST00000230066.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2173;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81887133_A/T chr15:81887133 T ENSMUSG00000022476.8 ENSMUST00000230669.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1095;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_81887133_A/T chr15:81887133 T ENSMUSG00000022477.13 ENSMUST00000231091.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_82110155_C/T chr15:82110155 T ENSMUSG00000068117.10 ENSMUST00000089178.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_82110155_C/T chr15:82110155 T ENSMUSG00000068117.10 ENSMUST00000186125.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_82110155_C/T chr15:82110155 T ENSMUSG00000068117.10 ENSMUST00000188048.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_82110155_C/T chr15:82110155 T ENSMUSG00000068117.10 ENSMUST00000189540.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_82110155_C/T chr15:82110155 T ENSMUSG00000068117.10 ENSMUST00000229119.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_82253702_TTT/- chr15:82253702-82253704 - ENSMUSG00000068099.4 ENSMUST00000136948.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_82253702_TTT/- chr15:82253702-82253704 - ENSMUSG00000068099.4 ENSMUST00000143238.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2319;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_83060986_ACAC/-/AC chr15:83060986-83060989 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_83060986_ACAC/-/AC chr15:83060986-83060989 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_83161808_A/C chr15:83161808 C ENSMUSG00000018042.18 ENSMUST00000018186.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_83161808_A/C chr15:83161808 C ENSMUSG00000018042.18 ENSMUST00000162178.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_83161808_A/C chr15:83161808 C ENSMUSG00000018042.18 ENSMUST00000162834.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_83970643_A/G chr15:83970643 G ENSMUSG00000022441.17 ENSMUST00000140633.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1840;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_83970643_A/G chr15:83970643 G ENSMUSG00000022441.17 ENSMUST00000149563.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2801;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_83970643_A/G chr15:83970643 G ENSMUSG00000022441.17 ENSMUST00000156187.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_84030745_-/AAGAAG chr15:84030744-84030745 AAGAAG ENSMUSG00000081925.1 ENSMUST00000117961.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=69;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_84030745_-/AAGAAG chr15:84030744-84030745 AAGAAG ENSMUSG00000022441.17 ENSMUST00000122836.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_84030745_-/AAGAAG chr15:84030744-84030745 AAGAAG ENSMUSG00000022441.17 ENSMUST00000156187.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_84225446_TTT/-/TT chr15:84225446-84225448 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_84225446_TTT/-/TT chr15:84225446-84225448 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_86575726_TCCCTCCCTCCCTCCCTCCCTCCCTCCC/- chr15:86575726-86575753 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_86831406_-/ATCT chr15:86831405-86831406 ATCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_87866212_C/T chr15:87866212 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_87898289_TGTG/- chr15:87898289-87898292 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_87944517_GTGT/-/GTGTGT chr15:87944517-87944520 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_87944517_GTGT/-/GTGTGT chr15:87944517-87944520 GTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_87973457_-/CA chr15:87973456-87973457 CA ENSMUSG00000116061.1 ENSMUST00000229118.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_87973457_-/CA chr15:87973456-87973457 CA ENSMUSG00000116061.1 ENSMUST00000230713.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_88044261_-/A chr15:88044260-88044261 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_88054853_TT/-/T/TTT chr15:88054853-88054854 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_88054853_TT/-/T/TTT chr15:88054853-88054854 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_88054853_TT/-/T/TTT chr15:88054853-88054854 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_88425919_-/GATA chr15:88425918-88425919 GATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_89032871_TG/CA chr15:89032871-89032872 CA ENSMUSG00000015365.15 ENSMUST00000015509.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_89032871_TG/CA chr15:89032871-89032872 CA ENSMUSG00000015365.15 ENSMUST00000143030.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_89032871_TG/CA chr15:89032871-89032872 CA ENSMUSG00000015365.15 ENSMUST00000146993.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_89717620_-/TT chr15:89717619-89717620 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_90067152_AAA/-/AA chr15:90067152-90067154 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_90067152_AAA/-/AA chr15:90067152-90067154 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_90791505_TGTG/-/TG chr15:90791505-90791508 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_90791505_TGTG/-/TG chr15:90791505-90791508 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_91282673_AC/- chr15:91282673-91282674 - ENSMUSG00000036298.10 ENSMUST00000109283.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_91427354_-/A chr15:91427353-91427354 A ENSMUSG00000036298.10 ENSMUST00000109283.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_91993993_G/A chr15:91993993 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_92041168_TGTGTG/-/TG chr15:92041168-92041173 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_92041168_TGTGTG/-/TG chr15:92041168-92041173 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_92246609_T/- chr15:92246609 - ENSMUSG00000055022.14 ENSMUST00000000109.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92246609_T/- chr15:92246609 - ENSMUSG00000055022.14 ENSMUST00000068378.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92246609_T/- chr15:92246609 - ENSMUSG00000055022.14 ENSMUST00000141187.7 Transcript non_coding_transcript_exon_variant 1682 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92246609_T/- chr15:92246609 - ENSMUSG00000055022.14 ENSMUST00000169825.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92260598_G/A chr15:92260598 A ENSMUSG00000055022.14 ENSMUST00000000109.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92260598_G/A chr15:92260598 A ENSMUSG00000055022.14 ENSMUST00000068378.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92260598_G/A chr15:92260598 A ENSMUSG00000055022.14 ENSMUST00000169825.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92536087_-/G chr15:92536086-92536087 G ENSMUSG00000036218.16 ENSMUST00000169942.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92536087_-/G chr15:92536086-92536087 G ENSMUSG00000036218.16 ENSMUST00000229173.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_92847303_CCCCCTCCCCCTCTCCCCCTCCCCCTCTCCCCCTCCCCCTCTCCCCTCT/- chr15:92847303-92847351 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_93011775_TGTG/- chr15:93011775-93011778 - ENSMUSG00000109770.1 ENSMUST00000209724.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4758;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_93011780_T/C chr15:93011780 C ENSMUSG00000109770.1 ENSMUST00000209724.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4763;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_93607425_TGTG/-/TGTGTG chr15:93607425-93607428 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_93607425_TGTG/-/TGTGTG chr15:93607425-93607428 TGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_94379499_G/A chr15:94379499 A ENSMUSG00000022449.14 ENSMUST00000035342.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_94379499_G/A chr15:94379499 A ENSMUSG00000022449.14 ENSMUST00000129195.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_94379499_G/A chr15:94379499 A ENSMUSG00000022449.14 ENSMUST00000155907.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_94379501_C/T chr15:94379501 T ENSMUSG00000022449.14 ENSMUST00000035342.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_94379501_C/T chr15:94379501 T ENSMUSG00000022449.14 ENSMUST00000129195.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_94379501_C/T chr15:94379501 T ENSMUSG00000022449.14 ENSMUST00000155907.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_95193272_ACAC/- chr15:95193272-95193275 - ENSMUSG00000022454.17 ENSMUST00000229933.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_95193272_ACAC/- chr15:95193272-95193275 - ENSMUSG00000022454.17 ENSMUST00000229981.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_95206012_G/T chr15:95206012 T ENSMUSG00000022454.17 ENSMUST00000229933.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_95206012_G/T chr15:95206012 T ENSMUSG00000022454.17 ENSMUST00000229981.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_96265552_-/CA chr15:96265551-96265552 CA ENSMUSG00000097536.2 ENSMUST00000180852.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_96844853_CACA/- chr15:96844853-96844856 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_96859015_TGTG/- chr15:96859015-96859018 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_97098065_T/C chr15:97098065 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_97098067_TGT/- chr15:97098067-97098069 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_97469558_GAGA/- chr15:97469558-97469561 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000123397.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000087397.1 ENSMUST00000124374.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=532;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000126854.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000128775.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000129223.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000134885.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000135080.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=842;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000142196.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4162;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000146620.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000086601.1 ENSMUST00000149373.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000149419.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000153464.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4137;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000175894.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97766016_AG/- chr15:97766016-97766017 - ENSMUSG00000022469.17 ENSMUST00000177352.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_97949131_CA/- chr15:97949131-97949132 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_98377745_AA/-/AAA chr15:98377745-98377746 - ENSMUSG00000056184.5 ENSMUST00000057386.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=350;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98377745_AA/-/AAA chr15:98377745-98377746 AAA ENSMUSG00000056184.5 ENSMUST00000057386.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=350;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98377745_AA/-/AAA chr15:98377745-98377746 - ENSMUSG00000056184.5 ENSMUST00000215830.1 Transcript 3_prime_UTR_variant 2345-2346 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98377745_AA/-/AAA chr15:98377745-98377746 AAA ENSMUSG00000056184.5 ENSMUST00000215830.1 Transcript 3_prime_UTR_variant 2345-2346 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98860492_GCA/G/ACA chr15:98860492-98860494 G ENSMUSG00000048154.17 ENSMUST00000023741.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98860492_GCA/G/ACA chr15:98860492-98860494 ACA ENSMUSG00000048154.17 ENSMUST00000023741.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98860492_GCA/G/ACA chr15:98860492-98860494 G ENSMUSG00000048154.17 ENSMUST00000178486.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98860492_GCA/G/ACA chr15:98860492-98860494 ACA ENSMUSG00000048154.17 ENSMUST00000178486.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98860492_GCA/G/ACA chr15:98860492-98860494 G ENSMUSG00000048154.17 ENSMUST00000184363.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4183;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98860492_GCA/G/ACA chr15:98860492-98860494 ACA ENSMUSG00000048154.17 ENSMUST00000184363.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4183;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98938063_G/A chr15:98938063 A ENSMUSG00000023004.8 ENSMUST00000077577.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3498;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98938063_G/A chr15:98938063 A ENSMUSG00000116358.1 ENSMUST00000134214.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98938063_G/A chr15:98938063 A ENSMUSG00000023004.8 ENSMUST00000140969.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3625;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98938063_G/A chr15:98938063 A ENSMUSG00000116494.1 ENSMUST00000229079.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4487;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98938063_G/A chr15:98938063 A ENSMUSG00000116223.1 ENSMUST00000229156.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_98938063_G/A chr15:98938063 A ENSMUSG00000116223.1 ENSMUST00000229635.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99268753_GCA/G/ACA chr15:99268753-99268755 G ENSMUSG00000078907.2 ENSMUST00000109100.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2263;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99268753_GCA/G/ACA chr15:99268753-99268755 ACA ENSMUSG00000078907.2 ENSMUST00000109100.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2263;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000023749.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000023749.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000159209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000159209.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000159531.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000159531.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000160454.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3166;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000160454.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3166;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000160635.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000160635.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000161250.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000161250.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000161778.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000161778.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000162274.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=603;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000162274.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=603;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000162624.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000162624.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000229392.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000229392.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000231147.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1781;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000231147.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1781;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 - ENSMUSG00000023010.15 ENSMUST00000231173.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4559;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99402705_ACAC/-/AC chr15:99402705-99402708 AC ENSMUSG00000023010.15 ENSMUST00000231173.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4559;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99416342_A/C chr15:99416342 C ENSMUSG00000116039.1 ENSMUST00000231179.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2649;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99681899_TT/- chr15:99681899-99681900 - ENSMUSG00000023017.10 ENSMUST00000023758.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99681899_TT/- chr15:99681899-99681900 - ENSMUSG00000023017.10 ENSMUST00000226291.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_99681899_TT/- chr15:99681899-99681900 - ENSMUSG00000023017.10 ENSMUST00000228012.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100297912_ACAC/- chr15:100297912-100297915 - ENSMUSG00000045631.10 ENSMUST00000096200.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4846;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100297912_ACAC/- chr15:100297912-100297915 - ENSMUSG00000116182.1 ENSMUST00000230632.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=461;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100655788_TG/CA chr15:100655788-100655789 CA ENSMUSG00000098112.7 ENSMUST00000182068.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100655788_TG/CA chr15:100655788-100655789 CA ENSMUSG00000098112.7 ENSMUST00000182494.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4128;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100655788_TG/CA chr15:100655788-100655789 CA ENSMUSG00000098112.7 ENSMUST00000182574.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100655788_TG/CA chr15:100655788-100655789 CA ENSMUSG00000098112.7 ENSMUST00000182775.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100655788_TG/CA chr15:100655788-100655789 CA ENSMUSG00000098112.7 ENSMUST00000182814.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100655788_TG/CA chr15:100655788-100655789 CA ENSMUSG00000098112.7 ENSMUST00000183211.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000082209.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000108908.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000108909.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000108910.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000200963.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000201438.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4093;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000201518.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000201549.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000202452.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3038;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000202702.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_100965558_T/C chr15:100965558 C ENSMUSG00000023033.14 ENSMUST00000202971.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4564;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_101498169_AGAG/- chr15:101498169-101498172 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr15_102367333_GTGT/- chr15:102367333-102367336 - ENSMUSG00000060284.7 ENSMUST00000078508.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=820;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102367333_GTGT/- chr15:102367333-102367336 - ENSMUSG00000060284.7 ENSMUST00000229464.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=365;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102367333_GTGT/- chr15:102367333-102367336 - ENSMUSG00000060284.7 ENSMUST00000231100.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=151;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102461507_TT/- chr15:102461507-102461508 - ENSMUSG00000023048.13 ENSMUST00000023810.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102461507_TT/- chr15:102461507-102461508 - ENSMUSG00000089168.1 ENSMUST00000158543.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4846;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102461507_TT/- chr15:102461507-102461508 - ENSMUSG00000023048.13 ENSMUST00000164688.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102461507_TT/- chr15:102461507-102461508 - ENSMUSG00000023048.13 ENSMUST00000164938.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=919;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102461507_TT/- chr15:102461507-102461508 - ENSMUSG00000023048.13 ENSMUST00000164957.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102461507_TT/- chr15:102461507-102461508 - ENSMUSG00000023048.13 ENSMUST00000171245.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102461507_TT/- chr15:102461507-102461508 - ENSMUSG00000097234.1 ENSMUST00000181328.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000108828.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000169033.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000183452.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000183727.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000183765.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000184077.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000184485.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000184616.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000052414.9 ENSMUST00000184772.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000184906.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000184918.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_102579564_-/TTTTTTTTTT chr15:102579563-102579564 TTTTTTTTTT ENSMUSG00000099083.7 ENSMUST00000185070.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 - ENSMUSG00000022489.6 ENSMUST00000023132.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 GT ENSMUSG00000022489.6 ENSMUST00000023132.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 - ENSMUSG00000022489.6 ENSMUST00000226468.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 GT ENSMUSG00000022489.6 ENSMUST00000226468.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 - ENSMUSG00000022489.6 ENSMUST00000226493.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 GT ENSMUSG00000022489.6 ENSMUST00000226493.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 - ENSMUSG00000022489.6 ENSMUST00000227955.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103516404_GTGT/-/GT chr15:103516404-103516407 GT ENSMUSG00000022489.6 ENSMUST00000227955.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr15_103765784_A/C chr15:103765784 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_3625259_C/T chr16:3625259 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_3651164_C/- chr16:3651164 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_3651181_C/T chr16:3651181 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_4625162_T/- chr16:4625162 - ENSMUSG00000014301.13 ENSMUST00000014445.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=174;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4625162_T/- chr16:4625162 - ENSMUSG00000039637.15 ENSMUST00000038552.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=971;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4625162_T/- chr16:4625162 - ENSMUSG00000014303.13 ENSMUST00000127120.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=238;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4625162_T/- chr16:4625162 - ENSMUSG00000039637.15 ENSMUST00000135823.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3897;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4625162_T/- chr16:4625162 - ENSMUSG00000039637.15 ENSMUST00000150028.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2215;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4625162_T/- chr16:4625162 - ENSMUSG00000039637.15 ENSMUST00000150724.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3590;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4625162_T/- chr16:4625162 - ENSMUSG00000014301.13 ENSMUST00000156889.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=226;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4625162_T/- chr16:4625162 - ENSMUSG00000014301.13 ENSMUST00000229767.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=256;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4734619_TT/-/TTT chr16:4734619-4734620 - ENSMUSG00000004070.15 ENSMUST00000004172.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4734619_TT/-/TTT chr16:4734619-4734620 TTT ENSMUSG00000004070.15 ENSMUST00000004172.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4734619_TT/-/TTT chr16:4734619-4734620 - ENSMUSG00000086944.1 ENSMUST00000132069.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3810;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4734619_TT/-/TTT chr16:4734619-4734620 TTT ENSMUSG00000086944.1 ENSMUST00000132069.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3810;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4734619_TT/-/TTT chr16:4734619-4734620 - ENSMUSG00000004070.15 ENSMUST00000154117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_4734619_TT/-/TTT chr16:4734619-4734620 TTT ENSMUSG00000004070.15 ENSMUST00000154117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_5439984_G/T chr16:5439984 T ENSMUSG00000116029.1 ENSMUST00000229837.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6089460_TATC/- chr16:6089460-6089463 - ENSMUSG00000008658.16 ENSMUST00000230658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6212560_CACA/- chr16:6212560-6212563 - ENSMUSG00000008658.16 ENSMUST00000230658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6635594_CTCTCCTTCTCCCTCTCCCTCTCCCTCTCCCCCTACCCCTCTCCCTCCCCCCTCCCTCTCT/- chr16:6635594-6635654 - ENSMUSG00000008658.16 ENSMUST00000056416.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6635594_CTCTCCTTCTCCCTCTCCCTCTCCCTCTCCCCCTACCCCTCTCCCTCCCCCCTCCCTCTCT/- chr16:6635594-6635654 - ENSMUSG00000008658.16 ENSMUST00000230658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6673524_ATATAT/- chr16:6673524-6673529 - ENSMUSG00000008658.16 ENSMUST00000056416.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6673524_ATATAT/- chr16:6673524-6673529 - ENSMUSG00000008658.16 ENSMUST00000230658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6931287_GTGT/- chr16:6931287-6931290 - ENSMUSG00000008658.16 ENSMUST00000056416.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6931287_GTGT/- chr16:6931287-6931290 - ENSMUSG00000008658.16 ENSMUST00000115841.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_6931287_GTGT/- chr16:6931287-6931290 - ENSMUSG00000008658.16 ENSMUST00000230658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_7067664_-/TGTG chr16:7067663-7067664 TGTG ENSMUSG00000008658.16 ENSMUST00000056416.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_7067664_-/TGTG chr16:7067663-7067664 TGTG ENSMUSG00000008658.16 ENSMUST00000115841.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_7067664_-/TGTG chr16:7067663-7067664 TGTG ENSMUSG00000008658.16 ENSMUST00000229741.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2182;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_7067664_-/TGTG chr16:7067663-7067664 TGTG ENSMUSG00000008658.16 ENSMUST00000230658.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_7446735_TG/- chr16:7446735-7446736 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_7913845_G/T chr16:7913845 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_8948671_-/ATCT chr16:8948670-8948671 ATCT ENSMUSG00000116525.1 ENSMUST00000230927.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_9040960_AACAC/A/CACAC chr16:9040960-9040964 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_9040960_AACAC/A/CACAC chr16:9040960-9040964 CACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_10305946_AAA/- chr16:10305946-10305948 - ENSMUSG00000022505.9 ENSMUST00000078357.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_10305946_AAA/- chr16:10305946-10305948 - ENSMUSG00000022505.9 ENSMUST00000230141.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2660;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_10400214_C/G chr16:10400214 G ENSMUSG00000039179.13 ENSMUST00000043415.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4724;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_10400214_C/G chr16:10400214 G ENSMUSG00000039179.13 ENSMUST00000115831.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4766;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_11245290_A/- chr16:11245290 - ENSMUSG00000062203.15 ENSMUST00000080030.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_11245290_A/- chr16:11245290 - ENSMUSG00000062203.15 ENSMUST00000167571.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_11245290_A/- chr16:11245290 - ENSMUSG00000097537.2 ENSMUST00000230245.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_12340310_G/A chr16:12340310 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_12340313_A/T chr16:12340313 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_12583185_TGTG/- chr16:12583185-12583188 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_12767403_GTGT/- chr16:12767403-12767406 - ENSMUSG00000116520.1 ENSMUST00000230696.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 - ENSMUSG00000022545.13 ENSMUST00000023206.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 TT ENSMUSG00000022545.13 ENSMUST00000023206.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 - ENSMUSG00000022545.13 ENSMUST00000129049.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 TT ENSMUSG00000022545.13 ENSMUST00000129049.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 - ENSMUSG00000022545.13 ENSMUST00000138527.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4134;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 TT ENSMUSG00000022545.13 ENSMUST00000138527.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4134;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 - ENSMUSG00000022545.13 ENSMUST00000141024.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=353;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 TT ENSMUSG00000022545.13 ENSMUST00000141024.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=353;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 - ENSMUSG00000022545.13 ENSMUST00000156393.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13127983_T/-/TT chr16:13127983 TT ENSMUSG00000022545.13 ENSMUST00000156393.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13716844_C/A/CA chr16:13716844 A ENSMUSG00000022683.13 ENSMUST00000023364.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13716844_C/A/CA chr16:13716844 CA ENSMUSG00000022683.13 ENSMUST00000023364.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13716844_C/A/CA chr16:13716844 A ENSMUSG00000022683.13 ENSMUST00000115807.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13716844_C/A/CA chr16:13716844 CA ENSMUSG00000022683.13 ENSMUST00000115807.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13716844_C/A/CA chr16:13716844 A ENSMUSG00000022683.13 ENSMUST00000127780.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13716844_C/A/CA chr16:13716844 CA ENSMUSG00000022683.13 ENSMUST00000127780.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_13962892_TGTGTGTGTGTGTGTGTGTG/- chr16:13962892-13962911 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_14258874_AA/- chr16:14258874-14258875 - ENSMUSG00000018830.10 ENSMUST00000090287.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_14258874_AA/- chr16:14258874-14258875 - ENSMUSG00000018830.10 ENSMUST00000230397.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_14258874_AA/- chr16:14258874-14258875 - ENSMUSG00000018830.10 ENSMUST00000230643.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_14258874_AA/- chr16:14258874-14258875 - ENSMUSG00000018830.10 ENSMUST00000231567.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15226798_C/A chr16:15226798 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_15587316_AA/-/AAA chr16:15587316-15587317 - ENSMUSG00000022674.15 ENSMUST00000096234.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 AAA ENSMUSG00000022674.15 ENSMUST00000096234.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 - ENSMUSG00000022674.15 ENSMUST00000115776.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 AAA ENSMUSG00000022674.15 ENSMUST00000115776.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 - ENSMUSG00000022674.15 ENSMUST00000115777.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 AAA ENSMUSG00000022674.15 ENSMUST00000115777.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 - ENSMUSG00000022674.15 ENSMUST00000118236.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 AAA ENSMUSG00000022674.15 ENSMUST00000118236.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 - ENSMUSG00000116386.1 ENSMUST00000229197.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=48;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 AAA ENSMUSG00000116386.1 ENSMUST00000229197.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=48;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 - ENSMUSG00000022674.15 ENSMUST00000229244.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4705;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 AAA ENSMUSG00000022674.15 ENSMUST00000229244.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4705;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 - ENSMUSG00000022674.15 ENSMUST00000229859.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15587316_AA/-/AAA chr16:15587316-15587317 AAA ENSMUSG00000022674.15 ENSMUST00000229859.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15829929_TGTG/-/TG chr16:15829929-15829932 - ENSMUSG00000022672.8 ENSMUST00000023352.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_15829929_TGTG/-/TG chr16:15829929-15829932 TG ENSMUSG00000022672.8 ENSMUST00000023352.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000022789.15 ENSMUST00000023477.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1881;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000022789.15 ENSMUST00000096229.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1902;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000022789.15 ENSMUST00000115749.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2307;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000098037.1 ENSMUST00000182585.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4341;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000115923.1 ENSMUST00000229446.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1829;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000022789.15 ENSMUST00000230022.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2295;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000022789.15 ENSMUST00000230038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1889;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_16360840_ACAC/- chr16:16360840-16360843 - ENSMUSG00000022789.15 ENSMUST00000230980.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1975;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17231801_A/T chr16:17231801 T ENSMUSG00000050240.16 ENSMUST00000090190.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1771;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17231801_A/T chr16:17231801 T ENSMUSG00000050240.16 ENSMUST00000232082.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1863;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17231801_A/T chr16:17231801 T ENSMUSG00000116743.1 ENSMUST00000232426.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1800;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000164950.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1649;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000231322.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2249;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000231334.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3173;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000231347.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2653;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000231517.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1914;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000231638.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1920;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000231646.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1914;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232031.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1901;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232071.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1920;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232092.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1881;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232167.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2542;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232220.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1900;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232364.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3124;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000116743.1 ENSMUST00000232426.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232520.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2432;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17274425_ACAC/- chr16:17274425-17274428 - ENSMUSG00000055692.21 ENSMUST00000232636.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2667;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_17754263_TTTT/- chr16:17754263-17754266 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000000326.13 ENSMUST00000000335.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000000326.13 ENSMUST00000000335.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000115604.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000115604.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000115605.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000115605.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000115606.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000115606.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000000326.13 ENSMUST00000115609.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=972;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000000326.13 ENSMUST00000115609.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=972;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000126778.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=872;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000126778.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=872;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000131303.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000131303.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000144233.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1100;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000144233.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1100;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000177856.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000177856.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000178093.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000178093.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000205679.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000205679.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000206151.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000206151.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 - ENSMUSG00000075704.16 ENSMUST00000206606.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_18427824_AA/-/A chr16:18427824-18427825 A ENSMUSG00000075704.16 ENSMUST00000206606.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19114288_C/T chr16:19114288 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_19230795_G/T chr16:19230795 T ENSMUSG00000104927.1 ENSMUST00000197818.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19230795_G/T chr16:19230795 T ENSMUSG00000105128.1 ENSMUST00000199355.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=538;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19519009_C/A chr16:19519009 A ENSMUSG00000045341.2 ENSMUST00000054606.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3375;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19519009_C/A chr16:19519009 A ENSMUSG00000045341.2 ENSMUST00000214315.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19519009_C/A chr16:19519009 A ENSMUSG00000045341.2 ENSMUST00000217566.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19533125_GTGTGTGTGTGT/- chr16:19533125-19533136 - ENSMUSG00000061361.2 ENSMUST00000078554.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2207;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19533125_GTGTGTGTGTGT/- chr16:19533125-19533136 - ENSMUSG00000061361.2 ENSMUST00000213480.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_19994079_AA/- chr16:19994079-19994080 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_20565065_A/G chr16:20565065 G ENSMUSG00000003234.16 ENSMUST00000003319.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3686;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20565065_A/G chr16:20565065 G ENSMUSG00000003234.16 ENSMUST00000135861.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4795;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20565065_A/G chr16:20565065 G ENSMUSG00000003234.16 ENSMUST00000148679.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4247;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20565065_A/G chr16:20565065 G ENSMUSG00000116942.1 ENSMUST00000231625.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=512;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20565065_A/G chr16:20565065 G ENSMUSG00000116604.1 ENSMUST00000231640.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1293;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000022842.18 ENSMUST00000003898.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=298;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000115293.2 ENSMUST00000079600.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000115293.2 ENSMUST00000120394.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000022842.18 ENSMUST00000122306.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=315;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000022842.18 ENSMUST00000125971.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3340;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000022842.18 ENSMUST00000133344.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=321;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000022842.18 ENSMUST00000145511.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1615;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20629529_AA/- chr16:20629529-20629530 - ENSMUSG00000022842.18 ENSMUST00000152246.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=315;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000022843.17 ENSMUST00000007207.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4479;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000050821.14 ENSMUST00000056518.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000050821.14 ENSMUST00000118919.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000022843.17 ENSMUST00000120099.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4738;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000050821.14 ENSMUST00000128273.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000022843.17 ENSMUST00000148131.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4503;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000050821.14 ENSMUST00000149543.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000022843.17 ENSMUST00000153075.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4513;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000050821.14 ENSMUST00000232207.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20698484_GC/AT chr16:20698484-20698485 AT ENSMUSG00000022843.17 ENSMUST00000232309.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4740;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000007171.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1312;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000022847.15 ENSMUST00000076422.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1217;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000115423.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1312;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000022847.15 ENSMUST00000115437.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000151150.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4391;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000153299.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1312;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000231636.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000231689.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1688;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000231698.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000022847.15 ENSMUST00000231826.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1264;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000232020.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1619;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000232104.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000022847.15 ENSMUST00000232217.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1188;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20731815_T/A chr16:20731815 A ENSMUSG00000006958.14 ENSMUST00000232646.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_20963990_T/- chr16:20963990 - ENSMUSG00000116732.1 ENSMUST00000232658.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2848;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_21126964_TGTG/-/TG chr16:21126964-21126967 - ENSMUSG00000116731.1 ENSMUST00000232109.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4441;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_21126964_TGTG/-/TG chr16:21126964-21126967 TG ENSMUSG00000116731.1 ENSMUST00000232109.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4441;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_21152392_TT/-/T/TTT chr16:21152392-21152393 - ENSMUSG00000090356.2 ENSMUST00000170665.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=262;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_21152392_TT/-/T/TTT chr16:21152392-21152393 T ENSMUSG00000090356.2 ENSMUST00000170665.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=262;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_21152392_TT/-/T/TTT chr16:21152392-21152393 TTT ENSMUSG00000090356.2 ENSMUST00000170665.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=262;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22806119_ACACAC/- chr16:22806119-22806124 - ENSMUSG00000033501.5 ENSMUST00000040592.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 - ENSMUSG00000022868.6 ENSMUST00000023583.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 AG ENSMUSG00000022868.6 ENSMUST00000023583.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3408;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 - ENSMUSG00000022868.6 ENSMUST00000231328.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2770;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 AG ENSMUSG00000022868.6 ENSMUST00000231328.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2770;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 - ENSMUSG00000116831.1 ENSMUST00000231692.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 AG ENSMUSG00000116831.1 ENSMUST00000231692.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 - ENSMUSG00000022868.6 ENSMUST00000231848.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2648;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 AG ENSMUSG00000022868.6 ENSMUST00000231848.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2648;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 - ENSMUSG00000022868.6 ENSMUST00000231932.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3416;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 AG ENSMUSG00000022868.6 ENSMUST00000231932.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3416;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 - ENSMUSG00000022868.6 ENSMUST00000232098.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3410;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 AG ENSMUSG00000022868.6 ENSMUST00000232098.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3410;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 - ENSMUSG00000022868.6 ENSMUST00000232556.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3778;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_22888626_AGAG/-/AG chr16:22888626-22888629 AG ENSMUSG00000022868.6 ENSMUST00000232556.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3778;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_24371241_A/- chr16:24371241 - ENSMUSG00000115852.2 ENSMUST00000231672.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_24371241_A/- chr16:24371241 - ENSMUSG00000116785.1 ENSMUST00000231939.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1009;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000040231.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000065523.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000115304.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000115305.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000115306.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=221;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000115307.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000115308.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_25801692_TCTC/- chr16:25801692-25801695 - ENSMUSG00000022510.14 ENSMUST00000115310.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26094743_A/C chr16:26094743 C ENSMUSG00000038168.5 ENSMUST00000039990.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26641923_T/C chr16:26641923 C ENSMUSG00000022514.14 ENSMUST00000023156.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26641923_T/C chr16:26641923 C ENSMUSG00000022514.14 ENSMUST00000096129.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26641923_T/C chr16:26641923 C ENSMUSG00000022514.14 ENSMUST00000166294.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26641923_T/C chr16:26641923 C ENSMUSG00000022514.14 ENSMUST00000174171.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26641923_T/C chr16:26641923 C ENSMUSG00000022514.14 ENSMUST00000174202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26642064_T/C chr16:26642064 C ENSMUSG00000022514.14 ENSMUST00000023156.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26642064_T/C chr16:26642064 C ENSMUSG00000022514.14 ENSMUST00000096129.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26642064_T/C chr16:26642064 C ENSMUSG00000022514.14 ENSMUST00000166294.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26642064_T/C chr16:26642064 C ENSMUSG00000022514.14 ENSMUST00000174171.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26642064_T/C chr16:26642064 C ENSMUSG00000022514.14 ENSMUST00000174202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 - ENSMUSG00000022514.14 ENSMUST00000023156.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 GT ENSMUSG00000022514.14 ENSMUST00000023156.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 - ENSMUSG00000022514.14 ENSMUST00000096129.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 GT ENSMUSG00000022514.14 ENSMUST00000096129.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 - ENSMUSG00000022514.14 ENSMUST00000166294.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 GT ENSMUSG00000022514.14 ENSMUST00000166294.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 - ENSMUSG00000022514.14 ENSMUST00000174171.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 GT ENSMUSG00000022514.14 ENSMUST00000174171.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 - ENSMUSG00000022514.14 ENSMUST00000174202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26649398_GTGT/-/GT chr16:26649398-26649401 GT ENSMUSG00000022514.14 ENSMUST00000174202.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_26906186_GAGA/- chr16:26906186-26906189 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_27154904_A/G chr16:27154904 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_28016420_C/G chr16:28016420 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_28177774_GTGT/- chr16:28177774-28177777 - ENSMUSG00000022523.10 ENSMUST00000100024.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_28177774_GTGT/- chr16:28177774-28177777 - ENSMUSG00000022523.10 ENSMUST00000232352.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_28177774_GTGT/- chr16:28177774-28177777 - ENSMUSG00000022523.10 ENSMUST00000232632.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_28637293_TT/-/TTT chr16:28637293-28637294 - ENSMUSG00000022523.10 ENSMUST00000232352.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_28637293_TT/-/TTT chr16:28637293-28637294 TTT ENSMUSG00000022523.10 ENSMUST00000232352.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_28704983_CC/- chr16:28704983-28704984 - ENSMUSG00000022523.10 ENSMUST00000232352.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_29049711_TCTA/- chr16:29049711-29049714 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_29912991_-/GGAGGA chr16:29912990-29912991 GGAGGA ENSMUSG00000097313.2 ENSMUST00000181968.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_29912991_-/GGAGGA chr16:29912990-29912991 GGAGGA ENSMUSG00000097313.2 ENSMUST00000232297.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000089775.10 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000125260.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000125559.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000140402.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000144001.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000144491.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000149110.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3133;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000153380.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30544043_-/TTCT chr16:30544042-30544043 TTCT ENSMUSG00000022537.18 ENSMUST00000232166.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=545;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30857653_TCTC/- chr16:30857653-30857656 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_30954459_G/T chr16:30954459 T ENSMUSG00000047434.14 ENSMUST00000055389.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=685;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_30954459_G/T chr16:30954459 T ENSMUSG00000047434.14 ENSMUST00000140566.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3002;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31237986_-/A chr16:31237985-31237986 A ENSMUSG00000116946.1 ENSMUST00000232234.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31237986_-/A chr16:31237985-31237986 A ENSMUSG00000116946.1 ENSMUST00000232655.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447832_A/C chr16:31447832 C ENSMUSG00000046598.15 ENSMUST00000089759.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447832_A/C chr16:31447832 C ENSMUSG00000046598.15 ENSMUST00000115226.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447832_A/C chr16:31447832 C ENSMUSG00000046598.15 ENSMUST00000115227.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447832_A/C chr16:31447832 C ENSMUSG00000046598.15 ENSMUST00000149039.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447832_A/C chr16:31447832 C ENSMUSG00000046598.15 ENSMUST00000232433.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447835_TA/- chr16:31447835-31447836 - ENSMUSG00000046598.15 ENSMUST00000089759.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447835_TA/- chr16:31447835-31447836 - ENSMUSG00000046598.15 ENSMUST00000115226.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447835_TA/- chr16:31447835-31447836 - ENSMUSG00000046598.15 ENSMUST00000115227.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447835_TA/- chr16:31447835-31447836 - ENSMUSG00000046598.15 ENSMUST00000149039.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31447835_TA/- chr16:31447835-31447836 - ENSMUSG00000046598.15 ENSMUST00000232433.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 - ENSMUSG00000022770.17 ENSMUST00000023454.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 AC ENSMUSG00000022770.17 ENSMUST00000023454.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 - ENSMUSG00000022770.17 ENSMUST00000064477.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 AC ENSMUSG00000022770.17 ENSMUST00000064477.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 - ENSMUSG00000022770.17 ENSMUST00000100001.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 AC ENSMUSG00000022770.17 ENSMUST00000100001.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 - ENSMUSG00000022770.17 ENSMUST00000115201.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 AC ENSMUSG00000022770.17 ENSMUST00000115201.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 - ENSMUSG00000022770.17 ENSMUST00000115205.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 AC ENSMUSG00000022770.17 ENSMUST00000115205.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 - ENSMUSG00000022770.17 ENSMUST00000132176.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31666112_ACAC/-/AC chr16:31666112-31666115 AC ENSMUSG00000022770.17 ENSMUST00000132176.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000022772.12 ENSMUST00000023457.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000081404.1 ENSMUST00000121984.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3040;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000022772.12 ENSMUST00000129900.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000022772.12 ENSMUST00000144320.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000022772.12 ENSMUST00000155515.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000096112.1 ENSMUST00000180144.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1901;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000022772.12 ENSMUST00000231360.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_31984135_CACA/- chr16:31984135-31984138 - ENSMUSG00000116739.1 ENSMUST00000232628.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2693;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000014075.15 ENSMUST00000014220.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1316;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000005615.15 ENSMUST00000079791.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=509;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000014075.15 ENSMUST00000080316.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1320;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000005615.15 ENSMUST00000104893.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=834;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000005615.15 ENSMUST00000115137.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=506;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000005615.15 ENSMUST00000115140.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=815;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000005615.15 ENSMUST00000123199.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000014075.15 ENSMUST00000131204.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1316;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000005615.15 ENSMUST00000141421.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=523;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32430415_T/- chr16:32430415 - ENSMUSG00000005615.15 ENSMUST00000141772.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=530;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32573050_AATAAT/-/AAT chr16:32573050-32573055 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_32573050_AATAAT/-/AAT chr16:32573050-32573055 AAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_32945242_AA/- chr16:32945242-32945243 - ENSMUSG00000022801.13 ENSMUST00000023491.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32945242_AA/- chr16:32945242-32945243 - ENSMUSG00000022801.13 ENSMUST00000135193.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32945242_AA/- chr16:32945242-32945243 - ENSMUSG00000022801.13 ENSMUST00000156928.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32945242_AA/- chr16:32945242-32945243 - ENSMUSG00000022801.13 ENSMUST00000164486.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32945242_AA/- chr16:32945242-32945243 - ENSMUSG00000022801.13 ENSMUST00000165616.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32945242_AA/- chr16:32945242-32945243 - ENSMUSG00000022801.13 ENSMUST00000170201.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_32945242_AA/- chr16:32945242-32945243 - ENSMUSG00000022801.13 ENSMUST00000170899.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33453074_AAA/-/AA chr16:33453074-33453076 - ENSMUSG00000022811.17 ENSMUST00000089677.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33453074_AAA/-/AA chr16:33453074-33453076 AA ENSMUSG00000022811.17 ENSMUST00000089677.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33453074_AAA/-/AA chr16:33453074-33453076 - ENSMUSG00000022811.17 ENSMUST00000165418.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33453074_AAA/-/AA chr16:33453074-33453076 AA ENSMUSG00000022811.17 ENSMUST00000165418.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33453074_AAA/-/AA chr16:33453074-33453076 - ENSMUSG00000022811.17 ENSMUST00000232023.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33453074_AAA/-/AA chr16:33453074-33453076 AA ENSMUSG00000022811.17 ENSMUST00000232023.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33578529_A/C chr16:33578529 C ENSMUSG00000035506.16 ENSMUST00000059056.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33578529_A/C chr16:33578529 C ENSMUSG00000035506.16 ENSMUST00000119173.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33578529_A/C chr16:33578529 C ENSMUSG00000035506.16 ENSMUST00000121925.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_33578529_A/C chr16:33578529 C ENSMUSG00000035506.16 ENSMUST00000122427.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000076810.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000114961.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000114963.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000114964.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000114966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000114973.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000142817.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34090052_G/T chr16:34090052 T ENSMUSG00000061751.16 ENSMUST00000232157.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34135840_AA/- chr16:34135840-34135841 - ENSMUSG00000061751.16 ENSMUST00000076810.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34135840_AA/- chr16:34135840-34135841 - ENSMUSG00000061751.16 ENSMUST00000114961.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34135840_AA/- chr16:34135840-34135841 - ENSMUSG00000061751.16 ENSMUST00000114963.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34135840_AA/- chr16:34135840-34135841 - ENSMUSG00000061751.16 ENSMUST00000142817.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34654670_AA/- chr16:34654670-34654671 - ENSMUSG00000022832.11 ENSMUST00000023530.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34654670_AA/- chr16:34654670-34654671 - ENSMUSG00000022832.11 ENSMUST00000148562.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34760574_-/ATT chr16:34760573-34760574 ATT ENSMUSG00000022836.11 ENSMUST00000155268.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34910713_-/A chr16:34910712-34910713 A ENSMUSG00000022836.11 ENSMUST00000023538.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34910713_-/A chr16:34910712-34910713 A ENSMUSG00000022836.11 ENSMUST00000232482.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_34910713_-/A chr16:34910712-34910713 A ENSMUSG00000022836.11 ENSMUST00000232541.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35546766_G/A chr16:35546766 A ENSMUSG00000052133.16 ENSMUST00000050625.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35546766_G/A chr16:35546766 A ENSMUSG00000052133.16 ENSMUST00000120756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35546766_G/A chr16:35546766 A ENSMUSG00000052133.16 ENSMUST00000133554.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35565494_ACAC/- chr16:35565494-35565497 - ENSMUSG00000052133.16 ENSMUST00000050625.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35565494_ACAC/- chr16:35565494-35565497 - ENSMUSG00000052133.16 ENSMUST00000120756.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35565494_ACAC/- chr16:35565494-35565497 - ENSMUSG00000052133.16 ENSMUST00000133554.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35791360_C/T chr16:35791360 T ENSMUSG00000022849.5 ENSMUST00000023555.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35791360_C/T chr16:35791360 T ENSMUSG00000022849.5 ENSMUST00000231579.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_35791360_C/T chr16:35791360 T ENSMUSG00000022849.5 ENSMUST00000231802.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36315803_TT/- chr16:36315803-36315804 - ENSMUSG00000094972.1 ENSMUST00000157239.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2907;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36315803_TT/- chr16:36315803-36315804 - ENSMUSG00000116897.1 ENSMUST00000232069.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3338;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36315803_TT/- chr16:36315803-36315804 - ENSMUSG00000116816.1 ENSMUST00000232642.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3073;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36450873_C/G chr16:36450873 G ENSMUSG00000054905.2 ENSMUST00000068182.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36450875_C/G chr16:36450875 G ENSMUSG00000054905.2 ENSMUST00000068182.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36512778_AGAA/- chr16:36512778-36512781 - ENSMUSG00000051980.13 ENSMUST00000063597.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36512778_AGAA/- chr16:36512778-36512781 - ENSMUSG00000051980.13 ENSMUST00000114847.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36512778_AGAA/- chr16:36512778-36512781 - ENSMUSG00000089118.1 ENSMUST00000158493.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=128;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36512778_AGAA/- chr16:36512778-36512781 - ENSMUSG00000051980.13 ENSMUST00000172826.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36659871_C/A chr16:36659871 A ENSMUSG00000022901.13 ENSMUST00000089620.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36659871_C/A chr16:36659871 A ENSMUSG00000022901.13 ENSMUST00000145506.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=903;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022837.14 ENSMUST00000023535.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022838.14 ENSMUST00000075946.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022837.14 ENSMUST00000114819.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022837.14 ENSMUST00000129123.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022838.14 ENSMUST00000134556.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022837.14 ENSMUST00000137076.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3589;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022838.14 ENSMUST00000138660.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022837.14 ENSMUST00000142619.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3581;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022837.14 ENSMUST00000153373.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_36854962_-/TTTTTTTTTTTTTTT chr16:36854961-36854962 TTTTTTTTTTTTTTT ENSMUSG00000022838.14 ENSMUST00000157072.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_37633268_AGAG/- chr16:37633268-37633271 - ENSMUSG00000022821.13 ENSMUST00000159787.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1248;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_37633268_AGAG/- chr16:37633268-37633271 - ENSMUSG00000022821.13 ENSMUST00000159938.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1248;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_37633268_AGAG/- chr16:37633268-37633271 - ENSMUSG00000022821.13 ENSMUST00000160847.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1248;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_37734590_ACAC/-/AC chr16:37734590-37734593 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_37734590_ACAC/-/AC chr16:37734590-37734593 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_38049252_-/AAAAA chr16:38049251-38049252 AAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_38177969_T/A chr16:38177969 A ENSMUSG00000022812.14 ENSMUST00000023507.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_38177969_T/A chr16:38177969 A ENSMUSG00000022812.14 ENSMUST00000114750.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_38177969_T/A chr16:38177969 A ENSMUSG00000022812.14 ENSMUST00000132057.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_38177969_T/A chr16:38177969 A ENSMUSG00000022812.14 ENSMUST00000134870.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_38660115_ACAC/- chr16:38660115-38660118 - ENSMUSG00000022799.4 ENSMUST00000023487.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_38660115_ACAC/- chr16:38660115-38660118 - ENSMUSG00000022799.4 ENSMUST00000124866.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_38660115_ACAC/- chr16:38660115-38660118 - ENSMUSG00000022799.4 ENSMUST00000132697.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_39216248_TGTG/-/TG chr16:39216248-39216251 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39216248_TGTG/-/TG chr16:39216248-39216251 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39256435_T/A chr16:39256435 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39337168_CACACA/-/CA chr16:39337168-39337173 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39337168_CACACA/-/CA chr16:39337168-39337173 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39691017_ACACAC/-/ACAC chr16:39691017-39691022 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39691017_ACACAC/-/ACAC chr16:39691017-39691022 ACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39819257_C/A chr16:39819257 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39828189_TA/T/AA chr16:39828189-39828190 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_39828189_TA/T/AA chr16:39828189-39828190 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_40292049_TGTG/- chr16:40292049-40292052 - ENSMUSG00000061080.11 ENSMUST00000187695.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40292049_TGTG/- chr16:40292049-40292052 - ENSMUSG00000061080.11 ENSMUST00000189229.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40292049_TGTG/- chr16:40292049-40292052 - ENSMUSG00000061080.11 ENSMUST00000189358.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40292049_TGTG/- chr16:40292049-40292052 - ENSMUSG00000061080.11 ENSMUST00000189829.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40292049_TGTG/- chr16:40292049-40292052 - ENSMUSG00000061080.11 ENSMUST00000191610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40519059_GTGT/- chr16:40519059-40519062 - ENSMUSG00000061080.11 ENSMUST00000187695.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40519059_GTGT/- chr16:40519059-40519062 - ENSMUSG00000061080.11 ENSMUST00000189229.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40519059_GTGT/- chr16:40519059-40519062 - ENSMUSG00000061080.11 ENSMUST00000189358.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40519059_GTGT/- chr16:40519059-40519062 - ENSMUSG00000061080.11 ENSMUST00000189829.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_40519059_GTGT/- chr16:40519059-40519062 - ENSMUSG00000061080.11 ENSMUST00000191610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41206786_AAG/A/GAG chr16:41206786-41206788 A ENSMUSG00000061080.11 ENSMUST00000187695.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41206786_AAG/A/GAG chr16:41206786-41206788 GAG ENSMUSG00000061080.11 ENSMUST00000187695.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41206786_AAG/A/GAG chr16:41206786-41206788 A ENSMUSG00000061080.11 ENSMUST00000189358.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41206786_AAG/A/GAG chr16:41206786-41206788 GAG ENSMUSG00000061080.11 ENSMUST00000189358.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41206786_AAG/A/GAG chr16:41206786-41206788 A ENSMUSG00000061080.11 ENSMUST00000191610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41206786_AAG/A/GAG chr16:41206786-41206788 GAG ENSMUSG00000061080.11 ENSMUST00000191610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41240432_AA/- chr16:41240432-41240433 - ENSMUSG00000061080.11 ENSMUST00000187695.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_41240432_AA/- chr16:41240432-41240433 - ENSMUSG00000061080.11 ENSMUST00000191610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_42604779_TGTG/-/TG chr16:42604779-42604782 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_42604779_TGTG/-/TG chr16:42604779-42604782 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_42852176_T/A chr16:42852176 A ENSMUSG00000075070.6 ENSMUST00000099759.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_42852176_T/A chr16:42852176 A ENSMUSG00000075070.6 ENSMUST00000130331.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_42852176_T/A chr16:42852176 A ENSMUSG00000075070.6 ENSMUST00000142270.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_42852176_T/A chr16:42852176 A ENSMUSG00000075070.6 ENSMUST00000147181.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_43193279_T/- chr16:43193279 - ENSMUSG00000022708.16 ENSMUST00000114694.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_43193279_T/- chr16:43193279 - ENSMUSG00000022708.16 ENSMUST00000126354.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_43193279_T/- chr16:43193279 - ENSMUSG00000022708.16 ENSMUST00000132881.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_43193279_T/- chr16:43193279 - ENSMUSG00000022708.16 ENSMUST00000151244.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_43193279_T/- chr16:43193279 - ENSMUSG00000022708.16 ENSMUST00000151290.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 - ENSMUSG00000022696.17 ENSMUST00000047446.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 T ENSMUSG00000022696.17 ENSMUST00000047446.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 TTTTTTTTTTTTTTTTT ENSMUSG00000022696.17 ENSMUST00000047446.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 - ENSMUSG00000022696.17 ENSMUST00000127124.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4894;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 T ENSMUSG00000022696.17 ENSMUST00000127124.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4894;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 TTTTTTTTTTTTTTTTT ENSMUSG00000022696.17 ENSMUST00000127124.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4894;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 - ENSMUSG00000022696.17 ENSMUST00000127567.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 T ENSMUSG00000022696.17 ENSMUST00000127567.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 TTTTTTTTTTTTTTTTT ENSMUSG00000022696.17 ENSMUST00000127567.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 - ENSMUSG00000022696.17 ENSMUST00000136381.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 T ENSMUSG00000022696.17 ENSMUST00000136381.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44268189_TT/-/T/TTTTTTTTTTTTTTTTT chr16:44268189-44268190 TTTTTTTTTTTTTTTTT ENSMUSG00000022696.17 ENSMUST00000136381.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44375526_ACAC/- chr16:44375526-44375529 - ENSMUSG00000043065.12 ENSMUST00000050897.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44375526_ACAC/- chr16:44375526-44375529 - ENSMUSG00000043065.12 ENSMUST00000133168.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44375526_ACAC/- chr16:44375526-44375529 - ENSMUSG00000043065.12 ENSMUST00000135340.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4753;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44375526_ACAC/- chr16:44375526-44375529 - ENSMUSG00000043065.12 ENSMUST00000145663.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1887;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44375526_ACAC/- chr16:44375526-44375529 - ENSMUSG00000043065.12 ENSMUST00000155661.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4758;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44728533_C/- chr16:44728533 - ENSMUSG00000036208.13 ENSMUST00000048788.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44728533_C/- chr16:44728533 - ENSMUSG00000036208.13 ENSMUST00000123673.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44728533_C/- chr16:44728533 - ENSMUSG00000036208.13 ENSMUST00000130805.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44728533_C/- chr16:44728533 - ENSMUSG00000036208.13 ENSMUST00000132610.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_44728533_C/- chr16:44728533 - ENSMUSG00000036208.13 ENSMUST00000147804.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_45201694_-/TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr16:45201693-45201694 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000062284.5 ENSMUST00000078768.5 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3406;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_45298129_GTGTGT/-/GT/GTGT/GTGTGTGT chr16:45298129-45298134 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_45298129_GTGTGT/-/GT/GTGT/GTGTGTGT chr16:45298129-45298134 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_45298129_GTGTGT/-/GT/GTGT/GTGTGTGT chr16:45298129-45298134 GTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_45298129_GTGTGT/-/GT/GTGT/GTGTGTGT chr16:45298129-45298134 GTGTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_46757494_T/G chr16:46757494 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_46763663_A/- chr16:46763663 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_46856209_-/AAGA chr16:46856208-46856209 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_47013464_ATAT/- chr16:47013464-47013467 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_47704340_GTGT/- chr16:47704340-47704343 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_47913517_G/A chr16:47913517 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_48161201_CACA/-/CA chr16:48161201-48161204 - ENSMUSG00000116755.1 ENSMUST00000232155.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2702;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_48161201_CACA/-/CA chr16:48161201-48161204 CA ENSMUSG00000116755.1 ENSMUST00000232155.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2702;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_49079152_T/- chr16:49079152 - ENSMUSG00000092009.1 ENSMUST00000168680.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_49339327_TCTA/- chr16:49339327-49339330 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_49986337_TATA/- chr16:49986337-49986340 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_50495693_CA/AG chr16:50495693-50495694 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_50994164_A/T chr16:50994164 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_51056846_-/TCTT chr16:51056845-51056846 TCTT ENSMUSG00000116706.1 ENSMUST00000231893.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3841;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_51769967_TATA/-/TA chr16:51769967-51769970 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_51769967_TATA/-/TA chr16:51769967-51769970 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_52029438_AC/- chr16:52029438-52029439 - ENSMUSG00000022637.11 ENSMUST00000114471.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1786;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_52029438_AC/- chr16:52029438-52029439 - ENSMUSG00000022637.11 ENSMUST00000226253.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2206;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_52029438_AC/- chr16:52029438-52029439 - ENSMUSG00000022637.11 ENSMUST00000226593.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2167;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_52029438_AC/- chr16:52029438-52029439 - ENSMUSG00000022637.11 ENSMUST00000227062.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2124;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_52029438_AC/- chr16:52029438-52029439 - ENSMUSG00000022637.11 ENSMUST00000227879.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2778;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_53347855_C/T chr16:53347855 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_53497240_-/CCCCCCCCCAC chr16:53497239-53497240 CCCCCCCCCAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_53833068_AAAAA/- chr16:53833068-53833072 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_53934066_-/AT chr16:53934065-53934066 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_54331694_AGAG/- chr16:54331694-54331697 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_54409194_GTGT/- chr16:54409194-54409197 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_54982854_GAGA/- chr16:54982854-54982857 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_55395459_-/TATT chr16:55395458-55395459 TATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_56756052_C/T chr16:56756052 T ENSMUSG00000022755.4 ENSMUST00000023437.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_56756052_C/T chr16:56756052 T ENSMUSG00000082485.1 ENSMUST00000120470.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2213;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_57197826_TGTG/- chr16:57197826-57197829 - ENSMUSG00000022749.8 ENSMUST00000023431.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_57197826_TGTG/- chr16:57197826-57197829 - ENSMUSG00000022749.8 ENSMUST00000226586.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_57197826_TGTG/- chr16:57197826-57197829 - ENSMUSG00000022749.8 ENSMUST00000228172.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=521;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_57197826_TGTG/- chr16:57197826-57197829 - ENSMUSG00000022749.8 ENSMUST00000231391.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_57197826_TGTG/- chr16:57197826-57197829 - ENSMUSG00000022749.8 ENSMUST00000231435.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_58364051_T/G chr16:58364051 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_59123217_G/A chr16:59123217 A ENSMUSG00000063020.2 ENSMUST00000072608.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3149;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_59123217_G/A chr16:59123217 A ENSMUSG00000063020.2 ENSMUST00000213228.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2159;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_59123217_G/A chr16:59123217 A ENSMUSG00000063020.2 ENSMUST00000216519.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2148;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_60149385_TATA/- chr16:60149385-60149388 - ENSMUSG00000055540.15 ENSMUST00000068860.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_60284075_TGTG/- chr16:60284075-60284078 - ENSMUSG00000055540.15 ENSMUST00000068860.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_61565762_C/G chr16:61565762 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_61716354_C/T chr16:61716354 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_62792622_ACAC/-/AC chr16:62792622-62792625 - ENSMUSG00000022911.11 ENSMUST00000089289.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1060;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_62792622_ACAC/-/AC chr16:62792622-62792625 AC ENSMUSG00000022911.11 ENSMUST00000089289.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1060;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_62792622_ACAC/-/AC chr16:62792622-62792625 - ENSMUSG00000022911.11 ENSMUST00000141665.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2728;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_62792622_ACAC/-/AC chr16:62792622-62792625 AC ENSMUSG00000022911.11 ENSMUST00000141665.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2728;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_63128184_T/A chr16:63128184 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_63128190_T/C chr16:63128190 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_63653862_AA/- chr16:63653862-63653863 - ENSMUSG00000052504.7 ENSMUST00000064405.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_63653862_AA/- chr16:63653862-63653863 - ENSMUSG00000052504.7 ENSMUST00000232049.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_63653862_AA/- chr16:63653862-63653863 - ENSMUSG00000052504.7 ENSMUST00000232461.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_63653862_AA/- chr16:63653862-63653863 - ENSMUSG00000052504.7 ENSMUST00000232654.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_64871863_G/A chr16:64871863 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_65176162_TGTG/- chr16:65176162-65176165 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_65321906_A/C chr16:65321906 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_65365527_C/T chr16:65365527 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_67221290_T/C chr16:67221290 C ENSMUSG00000064115.13 ENSMUST00000114292.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_67221290_T/C chr16:67221290 C ENSMUSG00000064115.13 ENSMUST00000120594.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_67221290_T/C chr16:67221290 C ENSMUSG00000064115.13 ENSMUST00000120898.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_67221290_T/C chr16:67221290 C ENSMUSG00000064115.13 ENSMUST00000123266.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_67768472_AAA/- chr16:67768472-67768474 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_68615395_C/T chr16:68615395 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_70257787_-/TTCC chr16:70257786-70257787 TTCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_70317213_GG/- chr16:70317213-70317214 - ENSMUSG00000022707.16 ENSMUST00000023393.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_70317213_GG/- chr16:70317213-70317214 - ENSMUSG00000022707.16 ENSMUST00000099628.4 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_70317213_GG/- chr16:70317213-70317214 - ENSMUSG00000022707.16 ENSMUST00000163832.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_70317213_GG/- chr16:70317213-70317214 - ENSMUSG00000022707.16 ENSMUST00000164300.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_70317213_GG/- chr16:70317213-70317214 - ENSMUSG00000022707.16 ENSMUST00000170464.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_70317213_GG/- chr16:70317213-70317214 - ENSMUSG00000022707.16 ENSMUST00000171132.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_70704143_G/C chr16:70704143 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_71119725_ACAC/-/AC chr16:71119725-71119728 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_71119725_ACAC/-/AC chr16:71119725-71119728 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_71154143_A/G chr16:71154143 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_71836324_-/G chr16:71836323-71836324 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_71881572_TGTG/-/TG chr16:71881572-71881575 - ENSMUSG00000116901.1 ENSMUST00000232427.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2343;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_71881572_TGTG/-/TG chr16:71881572-71881575 TG ENSMUSG00000116901.1 ENSMUST00000232427.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2343;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72223566_GA/- chr16:72223566-72223567 - ENSMUSG00000116769.1 ENSMUST00000231223.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2816;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72223566_GA/- chr16:72223566-72223567 - ENSMUSG00000116769.1 ENSMUST00000231977.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2819;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72494122_TCTC/- chr16:72494122-72494125 - ENSMUSG00000022883.11 ENSMUST00000231580.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 - ENSMUSG00000022883.11 ENSMUST00000023600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 TTT ENSMUSG00000022883.11 ENSMUST00000023600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 - ENSMUSG00000022883.11 ENSMUST00000231265.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 TTT ENSMUSG00000022883.11 ENSMUST00000231265.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 - ENSMUSG00000022883.11 ENSMUST00000231474.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 TTT ENSMUSG00000022883.11 ENSMUST00000231474.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 - ENSMUSG00000022883.11 ENSMUST00000231580.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 TTT ENSMUSG00000022883.11 ENSMUST00000231580.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 - ENSMUSG00000022883.11 ENSMUST00000232205.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_72676853_TT/-/TTT chr16:72676853-72676854 TTT ENSMUSG00000022883.11 ENSMUST00000232205.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000231434.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000231486.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000231534.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000231838.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000231943.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000232006.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000232059.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000232248.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000232394.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73127436_-/GT chr16:73127435-73127436 GT ENSMUSG00000116976.1 ENSMUST00000232549.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73488997_ATAT/- chr16:73488997-73489000 - ENSMUSG00000116806.1 ENSMUST00000231349.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3682;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_73625483_ACAC/-/AC chr16:73625483-73625486 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_73625483_ACAC/-/AC chr16:73625483-73625486 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_73632903_GTGT/- chr16:73632903-73632906 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_73753720_AC/- chr16:73753720-73753721 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_74121528_TATA/- chr16:74121528-74121531 - ENSMUSG00000052516.19 ENSMUST00000117200.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_74121528_TATA/- chr16:74121528-74121531 - ENSMUSG00000052516.19 ENSMUST00000117785.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_74121528_TATA/- chr16:74121528-74121531 - ENSMUSG00000052516.19 ENSMUST00000140062.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_74121528_TATA/- chr16:74121528-74121531 - ENSMUSG00000052516.19 ENSMUST00000226478.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_74121528_TATA/- chr16:74121528-74121531 - ENSMUSG00000052516.19 ENSMUST00000227347.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_74994208_TGTG/- chr16:74994208-74994211 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_75145119_ACAC/- chr16:75145119-75145122 - ENSMUSG00000116698.1 ENSMUST00000232159.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2111;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_76565495_TGTG/-/TG chr16:76565495-76565498 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_76565495_TGTG/-/TG chr16:76565495-76565498 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_76925098_G/T chr16:76925098 T ENSMUSG00000100857.2 ENSMUST00000208105.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_77235832_ACAC/- chr16:77235832-77235835 - ENSMUSG00000090386.10 ENSMUST00000182398.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=484;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_77235832_ACAC/- chr16:77235832-77235835 - ENSMUSG00000090386.10 ENSMUST00000182656.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=482;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_77235832_ACAC/- chr16:77235832-77235835 - ENSMUSG00000090386.10 ENSMUST00000183333.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=482;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_79974080_TT/-/T chr16:79974080-79974081 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_79974080_TT/-/T chr16:79974080-79974081 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_79993317_T/C chr16:79993317 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_80815631_C/G chr16:80815631 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_81979546_AAA/-/AA chr16:81979546-81979548 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_81979546_AAA/-/AA chr16:81979546-81979548 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_82015632_C/T chr16:82015632 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_82507706_A/G chr16:82507706 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_82712058_-/TCT chr16:82712057-82712058 TCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_82815829_-/AATA chr16:82815828-82815829 AATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_82974771_A/C chr16:82974771 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_83389595_ACAC/- chr16:83389595-83389598 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_83560156_A/T chr16:83560156 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_83705883_AG/- chr16:83705883-83705884 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_83841482_C/A chr16:83841482 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_83868986_G/T chr16:83868986 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_84029281_-/AAGA chr16:84029280-84029281 AAGA ENSMUSG00000116745.1 ENSMUST00000231610.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4097;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_84048348_AAAA/- chr16:84048348-84048351 - ENSMUSG00000116745.1 ENSMUST00000231610.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_84226073_GTGT/- chr16:84226073-84226076 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_84236046_TGTG/- chr16:84236046-84236049 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_85720044_G/A chr16:85720044 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_85720075_G/T chr16:85720075 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_85897348_AA/- chr16:85897348-85897349 - ENSMUSG00000022894.6 ENSMUST00000023611.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_86052936_CTCCTC/- chr16:86052936-86052941 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_86950892_C/A chr16:86950892 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_86950898_T/C chr16:86950898 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000023652.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000072256.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000114137.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000210910.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000211444.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000211635.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000226447.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000227986.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000228034.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_88029755_G/A chr16:88029755 A ENSMUSG00000022935.16 ENSMUST00000228188.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_89262645_ACAC/-/AC chr16:89262645-89262648 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_89262645_ACAC/-/AC chr16:89262645-89262648 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_89413841_A/C chr16:89413841 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_89413846_T/C chr16:89413846 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_89764967_G/C chr16:89764967 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_90039662_AATA/- chr16:90039662-90039665 - ENSMUSG00000002489.16 ENSMUST00000114124.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_90126323_T/A chr16:90126323 A ENSMUSG00000002489.16 ENSMUST00000114124.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92655860_GCA/G/ACA chr16:92655860-92655862 G ENSMUSG00000022952.17 ENSMUST00000023673.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92655860_GCA/G/ACA chr16:92655860-92655862 ACA ENSMUSG00000022952.17 ENSMUST00000023673.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92655860_GCA/G/ACA chr16:92655860-92655862 G ENSMUSG00000022952.17 ENSMUST00000113956.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92655860_GCA/G/ACA chr16:92655860-92655862 ACA ENSMUSG00000022952.17 ENSMUST00000113956.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92655860_GCA/G/ACA chr16:92655860-92655862 G ENSMUSG00000022952.17 ENSMUST00000168195.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92655860_GCA/G/ACA chr16:92655860-92655862 ACA ENSMUSG00000022952.17 ENSMUST00000168195.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92864827_-/ACACACAC chr16:92864826-92864827 ACACACAC ENSMUSG00000116805.1 ENSMUST00000231501.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_92865038_T/C chr16:92865038 C ENSMUSG00000116805.1 ENSMUST00000231501.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93025713_TATA/-/TATATA chr16:93025713-93025716 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_93025713_TATA/-/TATATA chr16:93025713-93025716 TATATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_93651153_AAAA/-/AAA chr16:93651153-93651156 - ENSMUSG00000084591.1 ENSMUST00000122642.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3168;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93651153_AAAA/-/AAA chr16:93651153-93651156 AAA ENSMUSG00000084591.1 ENSMUST00000122642.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3168;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93651153_AAAA/-/AAA chr16:93651153-93651156 - ENSMUSG00000109777.1 ENSMUST00000210451.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1932;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93651153_AAAA/-/AAA chr16:93651153-93651156 AAA ENSMUSG00000109777.1 ENSMUST00000210451.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1932;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93719094_T/G chr16:93719094 G ENSMUSG00000022946.10 ENSMUST00000045004.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93719094_T/G chr16:93719094 G ENSMUSG00000022946.10 ENSMUST00000226335.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93719094_T/G chr16:93719094 G ENSMUSG00000022946.10 ENSMUST00000226418.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93719094_T/G chr16:93719094 G ENSMUSG00000022946.10 ENSMUST00000228846.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000044068.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000201097.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000201706.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=72;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000201754.3 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000202261.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000202663.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4487;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000231891.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4489;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_93853710_G/A chr16:93853710 A ENSMUSG00000039456.10 ENSMUST00000232425.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94270577_T/A chr16:94270577 A ENSMUSG00000040820.16 ENSMUST00000099512.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94270577_T/A chr16:94270577 A ENSMUSG00000040820.16 ENSMUST00000163193.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94270577_T/A chr16:94270577 A ENSMUSG00000040820.16 ENSMUST00000226776.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94270577_T/A chr16:94270577 A ENSMUSG00000040820.16 ENSMUST00000227141.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94555444_T/G chr16:94555444 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_94615438_T/C chr16:94615438 C ENSMUSG00000022897.15 ENSMUST00000023614.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615438_T/C chr16:94615438 C ENSMUSG00000081692.1 ENSMUST00000119372.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4939;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615438_T/C chr16:94615438 C ENSMUSG00000022897.15 ENSMUST00000119878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615438_T/C chr16:94615438 C ENSMUSG00000022897.15 ENSMUST00000122284.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615438_T/C chr16:94615438 C ENSMUSG00000022897.15 ENSMUST00000139250.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615438_T/C chr16:94615438 C ENSMUSG00000022897.15 ENSMUST00000155791.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615444_AGTGCA/- chr16:94615444-94615449 - ENSMUSG00000022897.15 ENSMUST00000023614.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615444_AGTGCA/- chr16:94615444-94615449 - ENSMUSG00000081692.1 ENSMUST00000119372.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4928;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615444_AGTGCA/- chr16:94615444-94615449 - ENSMUSG00000022897.15 ENSMUST00000119878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615444_AGTGCA/- chr16:94615444-94615449 - ENSMUSG00000022897.15 ENSMUST00000122284.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615444_AGTGCA/- chr16:94615444-94615449 - ENSMUSG00000022897.15 ENSMUST00000139250.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94615444_AGTGCA/- chr16:94615444-94615449 - ENSMUSG00000022897.15 ENSMUST00000155791.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 - ENSMUSG00000022897.15 ENSMUST00000023614.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 T ENSMUSG00000022897.15 ENSMUST00000023614.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 - ENSMUSG00000022897.15 ENSMUST00000119878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 T ENSMUSG00000022897.15 ENSMUST00000119878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 - ENSMUSG00000022897.15 ENSMUST00000122284.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 T ENSMUSG00000022897.15 ENSMUST00000122284.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 - ENSMUSG00000022897.15 ENSMUST00000139250.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 T ENSMUSG00000022897.15 ENSMUST00000139250.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 - ENSMUSG00000022897.15 ENSMUST00000155791.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94638897_TT/-/T chr16:94638897-94638898 T ENSMUSG00000022897.15 ENSMUST00000155791.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94770414_AA/- chr16:94770414-94770415 - ENSMUSG00000043301.16 ENSMUST00000095873.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94770414_AA/- chr16:94770414-94770415 - ENSMUSG00000043301.16 ENSMUST00000099508.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94770414_AA/- chr16:94770414-94770415 - ENSMUSG00000043301.16 ENSMUST00000232562.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94867007_AGAG/- chr16:94867007-94867010 - ENSMUSG00000043301.16 ENSMUST00000095873.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94867007_AGAG/- chr16:94867007-94867010 - ENSMUSG00000043301.16 ENSMUST00000099508.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94867007_AGAG/- chr16:94867007-94867010 - ENSMUSG00000095435.1 ENSMUST00000175509.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2454;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94867007_AGAG/- chr16:94867007-94867010 - ENSMUSG00000043301.16 ENSMUST00000231744.1 Transcript splice_region_variant,intron_variant,non_coding_transcript_variant - - - - - - IMPACT=LOW;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94867007_AGAG/- chr16:94867007-94867010 - ENSMUSG00000043301.16 ENSMUST00000232128.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94867007_AGAG/- chr16:94867007-94867010 - ENSMUSG00000043301.16 ENSMUST00000232403.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94902484_T/C chr16:94902484 C ENSMUSG00000043301.16 ENSMUST00000095873.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94902484_T/C chr16:94902484 C ENSMUSG00000043301.16 ENSMUST00000099508.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94902484_T/C chr16:94902484 C ENSMUSG00000043301.16 ENSMUST00000231744.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94902484_T/C chr16:94902484 C ENSMUSG00000043301.16 ENSMUST00000232128.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94902484_T/C chr16:94902484 C ENSMUSG00000043301.16 ENSMUST00000232403.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 - ENSMUSG00000043301.16 ENSMUST00000095873.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 TTT ENSMUSG00000043301.16 ENSMUST00000095873.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 - ENSMUSG00000043301.16 ENSMUST00000099508.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 TTT ENSMUSG00000043301.16 ENSMUST00000099508.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 - ENSMUSG00000043301.16 ENSMUST00000231744.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 TTT ENSMUSG00000043301.16 ENSMUST00000231744.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 - ENSMUSG00000043301.16 ENSMUST00000232128.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 TTT ENSMUSG00000043301.16 ENSMUST00000232128.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 - ENSMUSG00000043301.16 ENSMUST00000232403.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_94927074_TT/-/TTT chr16:94927074-94927075 TTT ENSMUSG00000043301.16 ENSMUST00000232403.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000037154.13 Transcript 3_prime_UTR_variant 3844-3847 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000113854.7 Transcript 3_prime_UTR_variant 3752-3755 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000113855.7 Transcript 3_prime_UTR_variant 3883-3886 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000113856.7 Transcript 3_prime_UTR_variant 3835-3838 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000113858.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1061;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000113859.7 Transcript 3_prime_UTR_variant 3801-3804 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000113861.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=459;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000113862.7 Transcript 3_prime_UTR_variant 4460-4463 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000125847.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3262;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000134166.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2927;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000062609.14 ENSMUST00000140222.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3285;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000116720.1 ENSMUST00000232605.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95298966_TCTC/- chr16:95298966-95298969 - ENSMUSG00000116716.1 ENSMUST00000232622.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95933983_ATAT/-/AT/ATATAT chr16:95933983-95933986 - ENSMUSG00000117232.1 ENSMUST00000233375.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4906;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95933983_ATAT/-/AT/ATATAT chr16:95933983-95933986 AT ENSMUSG00000117232.1 ENSMUST00000233375.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4906;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95933983_ATAT/-/AT/ATATAT chr16:95933983-95933986 ATATAT ENSMUSG00000117232.1 ENSMUST00000233375.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4906;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_95943096_A/- chr16:95943096 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr16_96157198_C/T chr16:96157198 T ENSMUSG00000023147.17 ENSMUST00000023913.10 Transcript 3_prime_UTR_variant 1841 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000045275.16 ENSMUST00000054855.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1870;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000045275.16 ENSMUST00000113804.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1209;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000045275.16 ENSMUST00000142620.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3301;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000023147.17 ENSMUST00000232832.1 Transcript 3_prime_UTR_variant 2024 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000023147.17 ENSMUST00000232884.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3015;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000045275.16 ENSMUST00000233151.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1488;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000023147.17 ENSMUST00000233227.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2423;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000023147.17 ENSMUST00000233273.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1241;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96157198_C/T chr16:96157198 T ENSMUSG00000023147.17 ENSMUST00000233566.1 Transcript 3_prime_UTR_variant 1767 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96293533_-/TTCT chr16:96293532-96293533 TTCT ENSMUSG00000074892.9 ENSMUST00000099497.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96293533_-/TTCT chr16:96293532-96293533 TTCT ENSMUSG00000074892.9 ENSMUST00000113800.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96293533_-/TTCT chr16:96293532-96293533 TTCT ENSMUSG00000074892.9 ENSMUST00000134058.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96293533_-/TTCT chr16:96293532-96293533 TTCT ENSMUSG00000074892.9 ENSMUST00000153586.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_96980650_A/T chr16:96980650 T ENSMUSG00000050272.10 ENSMUST00000056102.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049898_T/C chr16:98049898 C ENSMUSG00000116673.1 ENSMUST00000232346.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049898_T/C chr16:98049898 C ENSMUSG00000116673.1 ENSMUST00000232376.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049898_T/C chr16:98049898 C ENSMUSG00000116673.1 ENSMUST00000232533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049898_T/C chr16:98049898 C ENSMUSG00000116673.1 ENSMUST00000232614.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2232;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049906_G/A chr16:98049906 A ENSMUSG00000116673.1 ENSMUST00000232346.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049906_G/A chr16:98049906 A ENSMUSG00000116673.1 ENSMUST00000232376.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049906_G/A chr16:98049906 A ENSMUSG00000116673.1 ENSMUST00000232533.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr16_98049906_G/A chr16:98049906 A ENSMUSG00000116673.1 ENSMUST00000232614.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2224;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_3699138_CACA/- chr17:3699138-3699141 - ENSMUSG00000023802.4 ENSMUST00000115800.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2877;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_3765971_-/T chr17:3765970-3765971 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_3870407_TGTG/- chr17:3870407-3870410 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_3900564_T/G chr17:3900564 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_3972883_A/C chr17:3972883 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_3972885_T/C chr17:3972885 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_4996893_A/- chr17:4996893 - ENSMUSG00000069729.14 ENSMUST00000092723.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_4996893_A/- chr17:4996893 - ENSMUSG00000069729.14 ENSMUST00000115797.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_4996893_A/- chr17:4996893 - ENSMUSG00000069729.14 ENSMUST00000115799.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_4996893_A/- chr17:4996893 - ENSMUSG00000069729.14 ENSMUST00000124362.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_4996893_A/- chr17:4996893 - ENSMUSG00000069729.14 ENSMUST00000156775.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_4996893_A/- chr17:4996893 - ENSMUSG00000069729.14 ENSMUST00000232180.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5133483_-/GAAA chr17:5133482-5133483 GAAA ENSMUSG00000069729.14 ENSMUST00000092723.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5133483_-/GAAA chr17:5133482-5133483 GAAA ENSMUSG00000069729.14 ENSMUST00000115797.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5133483_-/GAAA chr17:5133482-5133483 GAAA ENSMUSG00000069729.14 ENSMUST00000115799.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5133483_-/GAAA chr17:5133482-5133483 GAAA ENSMUSG00000069729.14 ENSMUST00000232180.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5216929_A/C chr17:5216929 C ENSMUSG00000069729.14 ENSMUST00000092723.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5216929_A/C chr17:5216929 C ENSMUSG00000069729.14 ENSMUST00000115797.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5216929_A/C chr17:5216929 C ENSMUSG00000069729.14 ENSMUST00000115799.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_5216929_A/C chr17:5216929 C ENSMUSG00000069729.14 ENSMUST00000232180.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_6791165_AG/GA chr17:6791165-6791166 GA ENSMUSG00000116893.1 ENSMUST00000231691.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_6877619_G/A chr17:6877619 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_6908707_GTGT/-/GT chr17:6908707-6908710 - ENSMUSG00000023806.10 ENSMUST00000024572.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_6908707_GTGT/-/GT chr17:6908707-6908710 GT ENSMUSG00000023806.10 ENSMUST00000024572.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_6908707_GTGT/-/GT chr17:6908707-6908710 - ENSMUSG00000023806.10 ENSMUST00000231794.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_6908707_GTGT/-/GT chr17:6908707-6908710 GT ENSMUSG00000023806.10 ENSMUST00000231794.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_7177251_GTGT/- chr17:7177251-7177254 - ENSMUSG00000023809.10 ENSMUST00000024575.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_7177251_GTGT/- chr17:7177251-7177254 - ENSMUSG00000023809.10 ENSMUST00000232617.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8164024_G/C chr17:8164024 C ENSMUSG00000069135.11 ENSMUST00000024636.14 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1516;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8164024_G/C chr17:8164024 C ENSMUSG00000069135.11 ENSMUST00000097419.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1477;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8164024_G/C chr17:8164024 C ENSMUSG00000069135.11 ENSMUST00000162586.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1496;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000024647.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000089085.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000115708.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000115715.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000115717.8 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000115720.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000115724.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_8978286_GG/- chr17:8978286-8978287 - ENSMUSG00000023868.17 ENSMUST00000149440.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_9177739_TTT/- chr17:9177739-9177741 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_9724632_CTCT/- chr17:9724632-9724635 - ENSMUSG00000117341.1 ENSMUST00000233459.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_9724632_CTCT/- chr17:9724632-9724635 - ENSMUSG00000117341.1 ENSMUST00000233960.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_10005487_AGAG/-/AG chr17:10005487-10005490 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_10005487_AGAG/-/AG chr17:10005487-10005490 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_10398665_T/C chr17:10398665 C ENSMUSG00000037196.6 ENSMUST00000041463.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4347;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000066658.12 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000186167.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000186406.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000191124.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000218435.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000233294.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000233411.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000233436.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000233634.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_11500304_T/C chr17:11500304 C ENSMUSG00000023826.16 ENSMUST00000233706.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12045497_G/A chr17:12045497 A ENSMUSG00000023826.16 ENSMUST00000190894.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12045497_G/A chr17:12045497 A ENSMUSG00000023826.16 ENSMUST00000191124.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12045497_G/A chr17:12045497 A ENSMUSG00000023826.16 ENSMUST00000233294.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12045497_G/A chr17:12045497 A ENSMUSG00000023826.16 ENSMUST00000233411.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12045497_G/A chr17:12045497 A ENSMUSG00000023826.16 ENSMUST00000233436.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12045497_G/A chr17:12045497 A ENSMUSG00000023826.16 ENSMUST00000233634.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12045497_G/A chr17:12045497 A ENSMUSG00000023826.16 ENSMUST00000233706.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12940413_G/C chr17:12940413 C ENSMUSG00000023832.14 ENSMUST00000007005.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2477;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12940413_G/C chr17:12940413 C ENSMUSG00000062480.12 ENSMUST00000043923.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=11;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12940413_G/C chr17:12940413 C ENSMUSG00000023832.14 ENSMUST00000159358.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3990;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12940413_G/C chr17:12940413 C ENSMUSG00000023832.14 ENSMUST00000159697.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3030;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12940413_G/C chr17:12940413 C ENSMUSG00000062480.12 ENSMUST00000160378.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_12940413_G/C chr17:12940413 C ENSMUSG00000023832.14 ENSMUST00000233792.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2625;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13208027_TTTTTCTT/- chr17:13208027-13208034 - ENSMUSG00000117051.1 ENSMUST00000233049.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1818;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13208027_TTTTTCTT/- chr17:13208027-13208034 - ENSMUSG00000117282.1 ENSMUST00000233574.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3579;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13208027_TTTTTCTT/- chr17:13208027-13208034 - ENSMUSG00000117282.1 ENSMUST00000233603.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3622;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13586599_C/A chr17:13586599 A ENSMUSG00000117063.1 ENSMUST00000135850.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13586599_C/A chr17:13586599 A ENSMUSG00000117042.1 ENSMUST00000185626.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13677207_CACA/- chr17:13677207-13677210 - ENSMUSG00000077349.1 ENSMUST00000104161.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1725;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13677207_CACA/- chr17:13677207-13677210 - ENSMUSG00000085705.1 ENSMUST00000128138.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2767;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13677207_CACA/- chr17:13677207-13677210 - ENSMUSG00000117063.1 ENSMUST00000135850.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13677207_CACA/- chr17:13677207-13677210 - ENSMUSG00000085705.1 ENSMUST00000145030.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13677207_CACA/- chr17:13677207-13677210 - ENSMUSG00000085705.1 ENSMUST00000150889.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2284;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000137495.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000137708.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000137784.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000139347.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000139666.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000150848.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000156591.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_13779565_A/- chr17:13779565 - ENSMUSG00000068036.15 ENSMUST00000170827.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_14075759_C/T chr17:14075759 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_14075807_C/T chr17:14075807 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_14099405_C/T chr17:14099405 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_14632633_G/C chr17:14632633 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_14632637_TG/- chr17:14632637-14632638 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_14971574_ACAC/- chr17:14971574-14971577 - ENSMUSG00000116780.1 ENSMUST00000097399.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_14971574_ACAC/- chr17:14971574-14971577 - ENSMUSG00000116780.1 ENSMUST00000231584.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_14971574_ACAC/- chr17:14971574-14971577 - ENSMUSG00000116780.1 ENSMUST00000232173.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15420932_AA/- chr17:15420932-15420933 - ENSMUSG00000014763.8 ENSMUST00000055352.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15420932_AA/- chr17:15420932-15420933 - ENSMUSG00000014763.8 ENSMUST00000231274.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15420932_AA/- chr17:15420932-15420933 - ENSMUSG00000116718.1 ENSMUST00000231577.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=869;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15420932_AA/- chr17:15420932-15420933 - ENSMUSG00000116718.1 ENSMUST00000231947.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1122;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15544097_TT/AC chr17:15544097-15544098 AC ENSMUSG00000051977.16 ENSMUST00000128267.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1021;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15544097_TT/AC chr17:15544097-15544098 AC ENSMUSG00000051977.16 ENSMUST00000130297.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1134;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15544097_TT/AC chr17:15544097-15544098 AC ENSMUSG00000051977.16 ENSMUST00000167994.9 Transcript missense_variant 2419-2420 2407-2408 803 N/V AAc/GTc - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15544097_TT/AC chr17:15544097-15544098 AC ENSMUSG00000116950.1 ENSMUST00000231919.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3718;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15544097_TT/AC chr17:15544097-15544098 AC ENSMUSG00000051977.16 ENSMUST00000233295.1 Transcript missense_variant 2441-2442 2419-2420 807 N/V AAc/GTc - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_15653310_GTGT/- chr17:15653310-15653313 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_15785730_TT/- chr17:15785730-15785731 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_16094373_-/ATAT chr17:16094372-16094373 ATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_16255416_TCTT/- chr17:16255416-16255419 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_16298506_G/C chr17:16298506 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_16615760_ATATAT/- chr17:16615760-16615765 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_16918706_T/- chr17:16918706 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_17040567_G/A chr17:17040567 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 - ENSMUSG00000116564.1 ENSMUST00000024620.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1935;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 GGGAGGGGAG ENSMUSG00000116564.1 ENSMUST00000024620.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1935;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 - ENSMUSG00000116564.1 ENSMUST00000232199.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2216;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 GGGAGGGGAG ENSMUSG00000116564.1 ENSMUST00000232199.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2216;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 - ENSMUSG00000116590.1 ENSMUST00000232288.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 GGGAGGGGAG ENSMUSG00000116590.1 ENSMUST00000232288.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 - ENSMUSG00000116564.1 ENSMUST00000232396.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2198;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17372360_GGGAGGGGAGGGGAG/-/GGGAGGGGAG chr17:17372360-17372374 GGGAGGGGAG ENSMUSG00000116564.1 ENSMUST00000232396.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2198;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17700141_GG/- chr17:17700141-17700142 - ENSMUSG00000092120.2 ENSMUST00000169805.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17700141_GG/- chr17:17700141-17700142 - ENSMUSG00000092120.2 ENSMUST00000231659.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17700141_GG/- chr17:17700141-17700142 - ENSMUSG00000092120.2 ENSMUST00000232078.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17700141_GG/- chr17:17700141-17700142 - ENSMUSG00000092120.2 ENSMUST00000232113.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000012759.13 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000052338.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4914;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000065396.1 ENSMUST00000083462.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2330;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000065479.2 ENSMUST00000083545.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1708;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000133912.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=154;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000137228.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000139969.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000150302.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000155293.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3359;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000172097.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000092799.1 ENSMUST00000175058.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2128;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000177859.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000178056.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=362;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000178408.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=521;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000105758.1 ENSMUST00000196737.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2143;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000226899.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_17832587_ACAC/- chr17:17832587-17832590 - ENSMUSG00000080316.11 ENSMUST00000228490.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_18041010_C/T chr17:18041010 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_18460030_ACAC/-/AC chr17:18460030-18460033 - ENSMUSG00000091631.2 ENSMUST00000166327.2 Transcript 3_prime_UTR_variant 10311-10314 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_18460030_ACAC/-/AC chr17:18460030-18460033 AC ENSMUSG00000091631.2 ENSMUST00000166327.2 Transcript 3_prime_UTR_variant 10311-10314 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_18460030_ACAC/-/AC chr17:18460030-18460033 - ENSMUSG00000091631.2 ENSMUST00000232090.1 Transcript 3_prime_UTR_variant 10270-10273 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_18460030_ACAC/-/AC chr17:18460030-18460033 AC ENSMUSG00000091631.2 ENSMUST00000232090.1 Transcript 3_prime_UTR_variant 10270-10273 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_18460030_ACAC/-/AC chr17:18460030-18460033 - ENSMUSG00000091631.2 ENSMUST00000232464.1 Transcript 3_prime_UTR_variant 10054-10057 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_18460030_ACAC/-/AC chr17:18460030-18460033 AC ENSMUSG00000091631.2 ENSMUST00000232464.1 Transcript 3_prime_UTR_variant 10054-10057 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_18760774_G/C chr17:18760774 C ENSMUSG00000093602.1 ENSMUST00000175997.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2491;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_20004129_AA/- chr17:20004129-20004130 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_21614557_AAAA/- chr17:21614557-21614560 - ENSMUSG00000117209.1 ENSMUST00000232712.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=735;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_21614557_AAAA/- chr17:21614557-21614560 - ENSMUSG00000117013.1 ENSMUST00000232793.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=940;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_21614557_AAAA/- chr17:21614557-21614560 - ENSMUSG00000117013.1 ENSMUST00000233749.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=941;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_22382970_AA/- chr17:22382970-22382971 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_22935286_TCG/- chr17:22935286-22935288 - ENSMUSG00000090355.3 ENSMUST00000176367.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2345;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23342067_T/C chr17:23342067 C ENSMUSG00000091076.2 ENSMUST00000168175.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23342067_T/C chr17:23342067 C ENSMUSG00000091076.2 ENSMUST00000234552.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23342067_T/C chr17:23342067 C ENSMUSG00000091076.2 ENSMUST00000234796.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1674;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000164856.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000234010.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000234055.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000234193.1 Transcript non_coding_transcript_exon_variant 417 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000234564.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000234839.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000234872.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23385020_C/T chr17:23385020 T ENSMUSG00000090966.2 ENSMUST00000235122.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571845_TTT/- chr17:23571845-23571847 - ENSMUSG00000062012.14 ENSMUST00000057029.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4005;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571845_TTT/- chr17:23571845-23571847 - ENSMUSG00000062012.14 ENSMUST00000115516.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3997;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571845_TTT/- chr17:23571845-23571847 - ENSMUSG00000115842.1 ENSMUST00000226550.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=645;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571845_TTT/- chr17:23571845-23571847 - ENSMUSG00000062012.14 ENSMUST00000228942.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4794;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571857_T/A chr17:23571857 A ENSMUSG00000062012.14 ENSMUST00000057029.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3995;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571857_T/A chr17:23571857 A ENSMUSG00000062012.14 ENSMUST00000115516.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3987;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571857_T/A chr17:23571857 A ENSMUSG00000115842.1 ENSMUST00000226550.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=635;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23571857_T/A chr17:23571857 A ENSMUSG00000062012.14 ENSMUST00000228942.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4784;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 - ENSMUSG00000023902.18 ENSMUST00000095595.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 AA ENSMUSG00000023902.18 ENSMUST00000095595.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 - ENSMUSG00000023902.18 ENSMUST00000115509.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 AA ENSMUSG00000023902.18 ENSMUST00000115509.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4060;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 - ENSMUSG00000023902.18 ENSMUST00000120967.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4053;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 AA ENSMUSG00000023902.18 ENSMUST00000120967.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4053;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 - ENSMUSG00000023902.18 ENSMUST00000129227.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4250;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 AA ENSMUSG00000023902.18 ENSMUST00000129227.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4250;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 - ENSMUSG00000023902.18 ENSMUST00000148062.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4250;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 AA ENSMUSG00000023902.18 ENSMUST00000148062.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4250;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 - ENSMUSG00000117059.1 ENSMUST00000233762.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4162;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_23615072_AAA/-/AA chr17:23615072-23615074 AA ENSMUSG00000117059.1 ENSMUST00000233762.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4162;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24305772_T/C chr17:24305772 C ENSMUSG00000035435.17 ENSMUST00000039324.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24305772_T/C chr17:24305772 C ENSMUSG00000094175.1 ENSMUST00000116896.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=983;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24305772_T/C chr17:24305772 C ENSMUSG00000035435.17 ENSMUST00000121226.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24305780_T/C chr17:24305780 C ENSMUSG00000035435.17 ENSMUST00000039324.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24305780_T/C chr17:24305780 C ENSMUSG00000094175.1 ENSMUST00000116896.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=991;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24305780_T/C chr17:24305780 C ENSMUSG00000035435.17 ENSMUST00000121226.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000019464.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1171;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000040888.10 ENSMUST00000046839.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000123026.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3172;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000124864.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3178;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000040688.16 ENSMUST00000126319.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2886;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000126342.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000141095.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3115;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000141522.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3465;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000150313.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4332;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000019320.14 ENSMUST00000152527.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3251;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000040888.10 ENSMUST00000234197.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000040888.10 ENSMUST00000234235.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000040888.10 ENSMUST00000234520.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000040888.10 ENSMUST00000234811.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=77;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_24695063_T/C chr17:24695063 C ENSMUSG00000040888.10 ENSMUST00000234859.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000036636.10 ENSMUST00000040729.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000036636.10 ENSMUST00000040729.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000036636.10 ENSMUST00000040729.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000059562.14 ENSMUST00000073277.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3514;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000059562.14 ENSMUST00000073277.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3514;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000059562.14 ENSMUST00000073277.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3514;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000036636.10 ENSMUST00000159426.1 Transcript non_coding_transcript_exon_variant 290-293 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000036636.10 ENSMUST00000159426.1 Transcript non_coding_transcript_exon_variant 290-293 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000036636.10 ENSMUST00000159426.1 Transcript non_coding_transcript_exon_variant 290-293 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000036636.10 ENSMUST00000160961.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000036636.10 ENSMUST00000160961.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000036636.10 ENSMUST00000160961.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000036636.10 ENSMUST00000162862.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000036636.10 ENSMUST00000162862.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000036636.10 ENSMUST00000162862.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000059562.14 ENSMUST00000182292.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3895;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000059562.14 ENSMUST00000182292.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3895;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000059562.14 ENSMUST00000182292.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3895;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000059562.14 ENSMUST00000182621.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000059562.14 ENSMUST00000182621.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000059562.14 ENSMUST00000182621.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000059562.14 ENSMUST00000183178.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3514;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000059562.14 ENSMUST00000183178.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3514;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000059562.14 ENSMUST00000183178.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3514;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 - ENSMUSG00000036636.10 ENSMUST00000233633.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AG ENSMUSG00000036636.10 ENSMUST00000233633.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_25158944_AGAG/-/AG/AGAGAG chr17:25158944-25158947 AGAGAG ENSMUSG00000036636.10 ENSMUST00000233633.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_26596964_GTGT/-/GT chr17:26596964-26596967 - ENSMUSG00000001576.14 ENSMUST00000001619.14 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_26596964_GTGT/-/GT chr17:26596964-26596967 GT ENSMUSG00000001576.14 ENSMUST00000001619.14 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_26596964_GTGT/-/GT chr17:26596964-26596967 - ENSMUSG00000001576.14 ENSMUST00000167662.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_26596964_GTGT/-/GT chr17:26596964-26596967 GT ENSMUSG00000001576.14 ENSMUST00000167662.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_26900810_AAA/-/A/AAAA chr17:26900810-26900812 - ENSMUSG00000092539.1 ENSMUST00000172664.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2924;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_26900810_AAA/-/A/AAAA chr17:26900810-26900812 A ENSMUSG00000092539.1 ENSMUST00000172664.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2924;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_26900810_AAA/-/A/AAAA chr17:26900810-26900812 AAAA ENSMUSG00000092539.1 ENSMUST00000172664.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2924;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27055207_TT/-/TTT chr17:27055207-27055208 - ENSMUSG00000042644.8 ENSMUST00000049308.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2096;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27055207_TT/-/TTT chr17:27055207-27055208 TTT ENSMUSG00000042644.8 ENSMUST00000049308.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2096;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27482102_TGTGTG/- chr17:27482102-27482107 - ENSMUSG00000063239.17 ENSMUST00000118161.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27482102_TGTGTG/- chr17:27482102-27482107 - ENSMUSG00000063239.17 ENSMUST00000118489.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27482102_TGTGTG/- chr17:27482102-27482107 - ENSMUSG00000063239.17 ENSMUST00000231290.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27482102_TGTGTG/- chr17:27482102-27482107 - ENSMUSG00000063239.17 ENSMUST00000231416.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27482102_TGTGTG/- chr17:27482102-27482107 - ENSMUSG00000063239.17 ENSMUST00000231809.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27482102_TGTGTG/- chr17:27482102-27482107 - ENSMUSG00000063239.17 ENSMUST00000232243.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000045896.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000097360.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000114872.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2604;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000114873.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000231236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000231350.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1412;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000231669.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000231854.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3489;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000232225.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3435;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27703045_-/TT chr17:27703044-27703045 TT ENSMUSG00000040276.15 ENSMUST00000232437.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27935710_G/A chr17:27935710 A ENSMUSG00000024219.16 ENSMUST00000025058.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27935710_G/A chr17:27935710 A ENSMUSG00000024219.16 ENSMUST00000088027.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27935710_G/A chr17:27935710 A ENSMUSG00000024219.16 ENSMUST00000114842.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27935710_G/A chr17:27935710 A ENSMUSG00000024219.16 ENSMUST00000232742.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_27935710_G/A chr17:27935710 A ENSMUSG00000024219.16 ENSMUST00000233525.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29104986_C/A chr17:29104986 A ENSMUSG00000023067.14 ENSMUST00000023829.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4264;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29104986_C/A chr17:29104986 A ENSMUSG00000023067.14 ENSMUST00000233296.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4259;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000064709.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000120346.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000149405.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000156215.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1551;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234012.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234028.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234054.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3884;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234234.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234256.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234326.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234377.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234459.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3901;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234631.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234711.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234714.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4531;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234773.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234820.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000234845.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000235023.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000235038.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000235040.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000235050.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000235074.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3944;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000235114.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_29286720_G/A chr17:29286720 A ENSMUSG00000052712.17 ENSMUST00000235117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_30356173_CACA/- chr17:30356173-30356176 - ENSMUSG00000062202.13 ENSMUST00000079924.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_30356173_CACA/- chr17:30356173-30356176 - ENSMUSG00000062202.13 ENSMUST00000168787.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_30361934_AA/- chr17:30361934-30361935 - ENSMUSG00000062202.13 ENSMUST00000079924.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_30361934_AA/- chr17:30361934-30361935 - ENSMUSG00000062202.13 ENSMUST00000168787.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31056089_T/G chr17:31056089 G ENSMUSG00000024030.6 ENSMUST00000024829.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1609;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31056089_T/G chr17:31056089 G ENSMUSG00000024030.6 ENSMUST00000139013.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1685;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31056089_T/G chr17:31056089 G ENSMUSG00000089622.1 ENSMUST00000158997.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3515;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 - ENSMUSG00000042345.14 ENSMUST00000048656.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 TG ENSMUSG00000042345.14 ENSMUST00000048656.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 - ENSMUSG00000042345.14 ENSMUST00000144772.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 TG ENSMUSG00000042345.14 ENSMUST00000144772.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 - ENSMUSG00000042345.14 ENSMUST00000147686.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2190;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 TG ENSMUSG00000042345.14 ENSMUST00000147686.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2190;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 - ENSMUSG00000042345.14 ENSMUST00000151620.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2006;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 TG ENSMUSG00000042345.14 ENSMUST00000151620.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2006;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 - ENSMUSG00000042345.14 ENSMUST00000173776.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31210104_TGTG/-/TG chr17:31210104-31210107 TG ENSMUSG00000042345.14 ENSMUST00000173776.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_31711596_-/CTTT chr17:31711595-31711596 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_31922864_TGTG/- chr17:31922864-31922867 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_32195093_G/A chr17:32195093 A ENSMUSG00000024002.17 ENSMUST00000003726.15 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1181;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_32195093_G/A chr17:32195093 A ENSMUSG00000024002.17 ENSMUST00000121285.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1181;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_32195093_G/A chr17:32195093 A ENSMUSG00000024002.17 ENSMUST00000229020.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3049;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_32195093_G/A chr17:32195093 A ENSMUSG00000024002.17 ENSMUST00000230565.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2652;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_32195093_G/A chr17:32195093 A ENSMUSG00000024002.17 ENSMUST00000230858.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3377;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34175301_A/T chr17:34175301 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000013787.15 ENSMUST00000013931.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000049823.9 ENSMUST00000052778.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3593;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000013787.15 ENSMUST00000078061.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000013787.15 ENSMUST00000097342.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000013787.15 ENSMUST00000114033.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000013787.15 ENSMUST00000138500.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4740;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000013787.15 ENSMUST00000146418.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000024371.14 ENSMUST00000148431.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4913;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000013787.15 ENSMUST00000150786.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4777;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000024371.14 ENSMUST00000174279.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2195;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_34900460_GTGT/- chr17:34900460-34900463 - ENSMUSG00000024371.14 ENSMUST00000174880.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4903;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000073413.9 ENSMUST00000007259.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4262;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000013766.11 ENSMUST00000013910.4 Transcript 3_prime_UTR_variant 1100-1107 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000034923.9 ENSMUST00000038507.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1711;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000013766.11 ENSMUST00000172494.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=468;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000073413.9 ENSMUST00000172639.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=697;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000013766.11 ENSMUST00000172678.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=212;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000073413.9 ENSMUST00000172745.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=706;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000073413.9 ENSMUST00000172903.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4298;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000013766.11 ENSMUST00000172959.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=477;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35078762_ATAAATAA/- chr17:35078762-35078769 - ENSMUSG00000073413.9 ENSMUST00000173120.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=697;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35933069_TC/CT chr17:35933069-35933070 CT ENSMUSG00000039220.16 ENSMUST00000087210.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=788;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35933069_TC/CT chr17:35933069-35933070 CT ENSMUSG00000039220.16 ENSMUST00000087211.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=786;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35933069_TC/CT chr17:35933069-35933070 CT ENSMUSG00000039220.16 ENSMUST00000151375.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4740;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_35933069_TC/CT chr17:35933069-35933070 CT ENSMUSG00000049832.6 ENSMUST00000173786.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2554;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000024446.13 ENSMUST00000025319.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1025;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000045409.16 ENSMUST00000042717.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4231;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000024446.13 ENSMUST00000077535.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1003;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000045409.16 ENSMUST00000113706.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4231;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000024446.13 ENSMUST00000172573.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1070;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000024446.13 ENSMUST00000173122.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1031;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000092392.1 ENSMUST00000173141.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000045409.16 ENSMUST00000173369.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4468;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000024446.13 ENSMUST00000173486.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1025;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000045409.16 ENSMUST00000173665.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4231;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000092317.1 ENSMUST00000173851.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2255;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36254642_-/TTT chr17:36254641-36254642 TTT ENSMUSG00000024446.13 ENSMUST00000174824.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1302;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36592883_G/T chr17:36592883 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000053434.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000065651.1 ENSMUST00000083717.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4369;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000123715.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000124307.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000130367.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000130801.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000134325.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000144182.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36837856_AA/- chr17:36837856-36837857 - ENSMUSG00000024457.16 ENSMUST00000179968.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36920186_CC/-/C chr17:36920186-36920187 - ENSMUSG00000092239.1 ENSMUST00000174380.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_36920186_CC/-/C chr17:36920186-36920187 C ENSMUSG00000092239.1 ENSMUST00000174380.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3605;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_37576479_TGTG/-/TG chr17:37576479-37576482 - ENSMUSG00000092292.3 ENSMUST00000216181.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_37576479_TGTG/-/TG chr17:37576479-37576482 TG ENSMUSG00000092292.3 ENSMUST00000216181.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_38019267_TGTG/-/TG chr17:38019267-38019270 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_38019267_TGTG/-/TG chr17:38019267-38019270 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_38702565_TT/-/TTT chr17:38702565-38702566 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_38702565_TT/-/TTT chr17:38702565-38702566 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_38726209_ACAC/-/AC chr17:38726209-38726212 - ENSMUSG00000117273.1 ENSMUST00000233036.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4716;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_38726209_ACAC/-/AC chr17:38726209-38726212 AC ENSMUSG00000117273.1 ENSMUST00000233036.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4716;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_39559628_T/C chr17:39559628 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_40240137_CA/- chr17:40240137-40240138 - ENSMUSG00000025433.7 ENSMUST00000026499.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_40541886_C/T chr17:40541886 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_41790828_TGTG/- chr17:41790828-41790831 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_42684087_-/A chr17:42684086-42684087 A ENSMUSG00000023918.12 ENSMUST00000024711.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_42684087_-/A chr17:42684086-42684087 A ENSMUSG00000023918.12 ENSMUST00000164524.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_42684087_-/A chr17:42684086-42684087 A ENSMUSG00000023918.12 ENSMUST00000167993.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_42684087_-/A chr17:42684086-42684087 A ENSMUSG00000023918.12 ENSMUST00000170723.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_42916640_TT/- chr17:42916640-42916641 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_43061663_-/TCTTCT chr17:43061662-43061663 TCTTCT ENSMUSG00000023915.5 ENSMUST00000024708.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_43542872_AG/GT chr17:43542872-43542873 GT ENSMUSG00000096140.2 ENSMUST00000178772.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44326334_ACAC/- chr17:44326334-44326337 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_44403210_AAA/- chr17:44403210-44403212 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000113568.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000113571.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000113572.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000159943.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000160673.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000162130.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000162373.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000162629.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000162816.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44611551_AA/- chr17:44611551-44611552 - ENSMUSG00000039153.16 ENSMUST00000162878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44925085_A/T chr17:44925085 T ENSMUSG00000038954.14 ENSMUST00000050630.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44925085_A/T chr17:44925085 T ENSMUSG00000038954.14 ENSMUST00000127798.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44925085_A/T chr17:44925085 T ENSMUSG00000038954.14 ENSMUST00000129416.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_44925085_A/T chr17:44925085 T ENSMUSG00000038954.14 ENSMUST00000130623.1 Transcript non_coding_transcript_exon_variant 2112 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_45205449_C/G chr17:45205449 G ENSMUSG00000096425.1 ENSMUST00000178626.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4517;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_45243108_GTGT/-/GT chr17:45243108-45243111 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_45243108_GTGT/-/GT chr17:45243108-45243111 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_45324231_ACAC/- chr17:45324231-45324234 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_45486683_G/A chr17:45486683 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_45486687_G/A chr17:45486687 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_45930892_TCTC/-/TC chr17:45930892-45930895 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_45930892_TCTC/-/TC chr17:45930892-45930895 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_46342262_C/A chr17:46342262 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_46354749_C/T chr17:46354749 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000023968.15 ENSMUST00000024764.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=169;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000067144.7 ENSMUST00000087012.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3410;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000023968.15 ENSMUST00000113465.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=153;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000023968.15 ENSMUST00000164180.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=169;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000023968.15 ENSMUST00000165750.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2192;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000023968.15 ENSMUST00000165811.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=197;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000023968.15 ENSMUST00000165993.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=178;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000023968.15 ENSMUST00000169441.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1902;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46428773_-/TGTG chr17:46428772-46428773 TGTG ENSMUSG00000067144.7 ENSMUST00000233715.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3640;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46835825_C/T chr17:46835825 T ENSMUSG00000036568.7 ENSMUST00000040624.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4412;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46835825_C/T chr17:46835825 T ENSMUSG00000036568.7 ENSMUST00000233455.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46835825_C/T chr17:46835825 T ENSMUSG00000036568.7 ENSMUST00000233537.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3511;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46835827_T/C chr17:46835827 C ENSMUSG00000036568.7 ENSMUST00000040624.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4414;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46835827_T/C chr17:46835827 C ENSMUSG00000036568.7 ENSMUST00000233455.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_46835827_T/C chr17:46835827 C ENSMUSG00000036568.7 ENSMUST00000233537.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3513;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47336546_GTGT/- chr17:47336546-47336549 - ENSMUSG00000064043.13 ENSMUST00000077951.13 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47336546_GTGT/- chr17:47336546-47336549 - ENSMUSG00000064043.13 ENSMUST00000190020.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47336546_GTGT/- chr17:47336546-47336549 - ENSMUSG00000064043.13 ENSMUST00000190080.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47720186_C/G chr17:47720186 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_47739291_C/G chr17:47739291 G ENSMUSG00000023987.14 ENSMUST00000024782.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4809;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47739291_C/G chr17:47739291 G ENSMUSG00000023990.18 ENSMUST00000086932.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47739291_C/G chr17:47739291 G ENSMUSG00000023990.18 ENSMUST00000113284.7 Transcript 5_prime_UTR_variant 389 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47739291_C/G chr17:47739291 G ENSMUSG00000023990.18 ENSMUST00000113288.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47739291_C/G chr17:47739291 G ENSMUSG00000023990.18 ENSMUST00000126258.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47838901_-/GATA chr17:47838900-47838901 GATA ENSMUSG00000032717.14 ENSMUST00000066368.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4209;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47838901_-/GATA chr17:47838900-47838901 GATA ENSMUSG00000065027.1 ENSMUST00000083093.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1915;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_47947891_CACA/- chr17:47947891-47947894 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_48318213_T/A chr17:48318213 A ENSMUSG00000043740.15 ENSMUST00000049614.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_48318213_T/A chr17:48318213 A ENSMUSG00000043740.15 ENSMUST00000124205.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_48318213_T/A chr17:48318213 A ENSMUSG00000043740.15 ENSMUST00000129825.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_49197489_-/TTTC chr17:49197488-49197489 TTTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_49262424_ACAC/- chr17:49262424-49262427 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_50585441_GTGT/-/GT chr17:50585441-50585444 - ENSMUSG00000038910.7 ENSMUST00000043938.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50585441_GTGT/-/GT chr17:50585441-50585444 GT ENSMUSG00000038910.7 ENSMUST00000043938.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50644765_A/C chr17:50644765 C ENSMUSG00000038910.7 ENSMUST00000043938.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50789152_ACAC/-/AC chr17:50789152-50789155 - ENSMUSG00000023923.10 ENSMUST00000024717.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50789152_ACAC/-/AC chr17:50789152-50789155 AC ENSMUSG00000023923.10 ENSMUST00000024717.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50789152_ACAC/-/AC chr17:50789152-50789155 - ENSMUSG00000023923.10 ENSMUST00000224528.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50789152_ACAC/-/AC chr17:50789152-50789155 AC ENSMUSG00000023923.10 ENSMUST00000224528.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50789152_ACAC/-/AC chr17:50789152-50789155 - ENSMUSG00000023923.10 ENSMUST00000224977.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50789152_ACAC/-/AC chr17:50789152-50789155 AC ENSMUSG00000023923.10 ENSMUST00000224977.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 - ENSMUSG00000023923.10 ENSMUST00000024717.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 A ENSMUSG00000023923.10 ENSMUST00000024717.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 - ENSMUSG00000023923.10 ENSMUST00000224528.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 A ENSMUSG00000023923.10 ENSMUST00000224528.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 - ENSMUSG00000023923.10 ENSMUST00000224977.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 A ENSMUSG00000023923.10 ENSMUST00000224977.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 - ENSMUSG00000023923.10 ENSMUST00000225252.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_50832521_AA/-/A chr17:50832521-50832522 A ENSMUSG00000023923.10 ENSMUST00000225252.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000024717.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000223758.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000223979.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000224528.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000224547.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000224977.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000225252.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51084304_T/A chr17:51084304 A ENSMUSG00000023923.10 ENSMUST00000225473.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000124222.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000124222.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000129205.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000129205.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000129667.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000129667.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000133574.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000133574.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000140727.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3189;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000140727.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3189;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000140979.7 Transcript 5_prime_UTR_variant 359-360 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000140979.7 Transcript 5_prime_UTR_variant 359-360 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000144331.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000144331.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000146414.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1402;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000146414.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1402;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000148559.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000148559.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000152830.8 Transcript 5_prime_UTR_variant 2683-2684 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000152830.8 Transcript 5_prime_UTR_variant 2683-2684 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000169480.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000169480.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 - ENSMUSG00000023927.15 ENSMUST00000176669.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1402;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_51812321_AA/-/A chr17:51812321-51812322 A ENSMUSG00000023927.15 ENSMUST00000176669.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1402;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_52037731_T/A chr17:52037731 A ENSMUSG00000100150.2 ENSMUST00000233877.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_52037731_T/A chr17:52037731 A ENSMUSG00000100150.2 ENSMUST00000233901.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_52131944_AGAGAG/- chr17:52131944-52131949 - ENSMUSG00000100150.2 ENSMUST00000233877.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_52131944_AGAGAG/- chr17:52131944-52131949 - ENSMUSG00000100150.2 ENSMUST00000233901.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_52319906_ATAT/- chr17:52319906-52319909 - ENSMUSG00000117033.1 ENSMUST00000232735.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_52319906_ATAT/- chr17:52319906-52319909 - ENSMUSG00000117076.1 ENSMUST00000232754.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_52865426_GTGT/- chr17:52865426-52865429 - ENSMUSG00000035580.10 ENSMUST00000039366.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_53339732_AAA/- chr17:53339732-53339734 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_54057837_TTT/-/TT chr17:54057837-54057839 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_54057837_TTT/-/TT chr17:54057837-54057839 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_54060341_AT/- chr17:54060341-54060342 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_54150907_C/T chr17:54150907 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_54174479_ACAC/- chr17:54174479-54174482 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_54760617_G/A chr17:54760617 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_55022104_AAA/- chr17:55022104-55022106 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_55168404_TGTGTG/-/TGTGTGTG chr17:55168404-55168409 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_55168404_TGTGTG/-/TGTGTGTG chr17:55168404-55168409 TGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_55725704_TCTTCT/-/TCT chr17:55725704-55725709 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_55725704_TCTTCT/-/TCT chr17:55725704-55725709 TCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_55840730_G/A chr17:55840730 A ENSMUSG00000032915.6 ENSMUST00000025004.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105551_A/T chr17:56105551 T ENSMUSG00000002831.13 ENSMUST00000002908.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105551_A/T chr17:56105551 T ENSMUSG00000002833.11 ENSMUST00000002911.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4955;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105551_A/T chr17:56105551 T ENSMUSG00000002831.13 ENSMUST00000190703.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105551_A/T chr17:56105551 T ENSMUSG00000002833.11 ENSMUST00000225342.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4959;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105551_A/T chr17:56105551 T ENSMUSG00000002833.11 ENSMUST00000225731.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4944;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105551_A/T chr17:56105551 T ENSMUSG00000002833.11 ENSMUST00000225843.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4953;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105551_A/T chr17:56105551 T ENSMUSG00000002833.11 ENSMUST00000226053.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4959;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105554_G/A chr17:56105554 A ENSMUSG00000002831.13 ENSMUST00000002908.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105554_G/A chr17:56105554 A ENSMUSG00000002833.11 ENSMUST00000002911.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4958;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105554_G/A chr17:56105554 A ENSMUSG00000002831.13 ENSMUST00000190703.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105554_G/A chr17:56105554 A ENSMUSG00000002833.11 ENSMUST00000225342.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105554_G/A chr17:56105554 A ENSMUSG00000002833.11 ENSMUST00000225731.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4947;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105554_G/A chr17:56105554 A ENSMUSG00000002833.11 ENSMUST00000225843.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4956;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56105554_G/A chr17:56105554 A ENSMUSG00000002833.11 ENSMUST00000226053.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56386948_AA/- chr17:56386948-56386949 - ENSMUSG00000024201.12 ENSMUST00000025036.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56386948_AA/- chr17:56386948-56386949 - ENSMUSG00000024201.12 ENSMUST00000086835.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_56386948_AA/- chr17:56386948-56386949 - ENSMUSG00000024201.12 ENSMUST00000132363.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=829;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_57120432_T/C chr17:57120432 C ENSMUSG00000117064.1 ENSMUST00000233215.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4985;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_57336942_T/A chr17:57336942 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_57438492_AAAA/-/AAA/AAAAA chr17:57438492-57438495 - ENSMUSG00000004730.15 ENSMUST00000004850.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_57438492_AAAA/-/AAA/AAAAA chr17:57438492-57438495 AAA ENSMUSG00000004730.15 ENSMUST00000004850.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_57438492_AAAA/-/AAA/AAAAA chr17:57438492-57438495 AAAAA ENSMUSG00000004730.15 ENSMUST00000004850.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_57438492_AAAA/-/AAA/AAAAA chr17:57438492-57438495 - ENSMUSG00000004730.15 ENSMUST00000086763.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_57438492_AAAA/-/AAA/AAAAA chr17:57438492-57438495 AAA ENSMUSG00000004730.15 ENSMUST00000086763.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_57438492_AAAA/-/AAA/AAAAA chr17:57438492-57438495 AAAAA ENSMUSG00000004730.15 ENSMUST00000086763.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_58385298_CACA/-/CA chr17:58385298-58385301 - ENSMUSG00000038048.8 ENSMUST00000076038.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_58385298_CACA/-/CA chr17:58385298-58385301 CA ENSMUSG00000038048.8 ENSMUST00000076038.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_58611737_CACA/- chr17:58611737-58611740 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_59044974_AA/CG chr17:59044974-59044975 CG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_59493542_G/A chr17:59493542 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_59493799_ACACACAC/- chr17:59493799-59493806 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_59819373_ACAC/-/AC chr17:59819373-59819376 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_59819373_ACAC/-/AC chr17:59819373-59819376 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_59864936_TG/CA chr17:59864936-59864937 CA ENSMUSG00000117191.1 ENSMUST00000233598.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_60053832_TGTGTG/-/TGTG chr17:60053832-60053837 - ENSMUSG00000101606.1 ENSMUST00000190184.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_60053832_TGTGTG/-/TGTG chr17:60053832-60053837 TGTG ENSMUSG00000101606.1 ENSMUST00000190184.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_60338167_GAGAGA/- chr17:60338167-60338172 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_60347958_ACAC/- chr17:60347958-60347961 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_60443902_A/G chr17:60443902 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_60776413_TT/-/TTT chr17:60776413-60776414 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_60776413_TT/-/TTT chr17:60776413-60776414 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_60954572_G/A chr17:60954572 A ENSMUSG00000117036.1 ENSMUST00000233618.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_61958676_C/G chr17:61958676 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_62284397_TGTG/-/TG chr17:62284397-62284400 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_62284397_TGTG/-/TG chr17:62284397-62284400 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_62571907_GTGTGT/- chr17:62571907-62571912 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_62597601_AA/- chr17:62597601-62597602 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_63655624_CTTTCTTT/-/CTTT chr17:63655624-63655631 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_63655624_CTTTCTTT/-/CTTT chr17:63655624-63655631 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_64084403_C/T chr17:64084403 T ENSMUSG00000000127.15 ENSMUST00000000129.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_64084403_C/T chr17:64084403 T ENSMUSG00000000127.15 ENSMUST00000038080.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_64084403_C/T chr17:64084403 T ENSMUSG00000000127.15 ENSMUST00000233190.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_64942362_AA/-/AAA chr17:64942362-64942363 - ENSMUSG00000077691.1 ENSMUST00000104503.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2358;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_64942362_AA/-/AAA chr17:64942362-64942363 AAA ENSMUSG00000077691.1 ENSMUST00000104503.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2358;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 - ENSMUSG00000045036.15 ENSMUST00000062161.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 TTC ENSMUSG00000045036.15 ENSMUST00000062161.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 - ENSMUSG00000045036.15 ENSMUST00000086722.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 TTC ENSMUSG00000045036.15 ENSMUST00000086722.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 - ENSMUSG00000045036.15 ENSMUST00000233117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 TTC ENSMUSG00000045036.15 ENSMUST00000233117.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 - ENSMUSG00000045036.15 ENSMUST00000233328.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 TTC ENSMUSG00000045036.15 ENSMUST00000233328.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 - ENSMUSG00000045036.15 ENSMUST00000233738.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65494606_TTCTTC/-/TTC chr17:65494606-65494611 TTC ENSMUSG00000045036.15 ENSMUST00000233738.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65980191_AAA/- chr17:65980191-65980193 - ENSMUSG00000034647.15 ENSMUST00000038116.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65980191_AAA/- chr17:65980191-65980193 - ENSMUSG00000034647.15 ENSMUST00000146090.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_65980191_AAA/- chr17:65980191-65980193 - ENSMUSG00000034647.15 ENSMUST00000233978.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4076;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_66413243_AAAA/- chr17:66413243-66413246 - ENSMUSG00000052105.17 ENSMUST00000086693.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_66413243_AAAA/- chr17:66413243-66413246 - ENSMUSG00000052105.17 ENSMUST00000097291.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_66413243_AAAA/- chr17:66413243-66413246 - ENSMUSG00000052105.17 ENSMUST00000127259.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_66413243_AAAA/- chr17:66413243-66413246 - ENSMUSG00000052105.17 ENSMUST00000177034.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_66413243_AAAA/- chr17:66413243-66413246 - ENSMUSG00000093686.1 ENSMUST00000177415.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=385;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_66706891_T/A chr17:66706891 A ENSMUSG00000033278.10 ENSMUST00000037974.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_66706891_T/A chr17:66706891 A ENSMUSG00000033278.10 ENSMUST00000223982.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_67255994_GTGT/-/GT chr17:67255994-67255997 - ENSMUSG00000033278.10 ENSMUST00000037974.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_67255994_GTGT/-/GT chr17:67255994-67255997 GT ENSMUSG00000033278.10 ENSMUST00000037974.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_67255994_GTGT/-/GT chr17:67255994-67255997 - ENSMUSG00000033278.10 ENSMUST00000223982.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_67255994_GTGT/-/GT chr17:67255994-67255997 GT ENSMUSG00000033278.10 ENSMUST00000223982.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_67255994_GTGT/-/GT chr17:67255994-67255997 - ENSMUSG00000033278.10 ENSMUST00000224091.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_67255994_GTGT/-/GT chr17:67255994-67255997 GT ENSMUSG00000033278.10 ENSMUST00000224091.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_68495547_ATAG/- chr17:68495547-68495550 - ENSMUSG00000041565.17 ENSMUST00000093007.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_68495547_ATAG/- chr17:68495547-68495550 - ENSMUSG00000041565.17 ENSMUST00000124543.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_68495547_ATAG/- chr17:68495547-68495550 - ENSMUSG00000041565.17 ENSMUST00000139383.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_69003225_TGTG/- chr17:69003225-69003228 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_69606422_T/- chr17:69606422 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000060072.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000097288.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000126801.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000130971.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000133717.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000133983.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000135938.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000140728.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000146730.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000148486.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000150260.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000150798.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000155016.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000156946.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000232998.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000233173.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70583376_ACAC/- chr17:70583376-70583379 - ENSMUSG00000003279.17 ENSMUST00000233283.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000059775.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2179;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000118283.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2185;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000127719.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2702;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000132825.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4269;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000134654.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4155;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000135007.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2955;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000156484.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2843;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000166395.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2185;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000172229.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2179;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000186358.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2185;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_70842026_-/ACAC chr17:70842025-70842026 ACAC ENSMUSG00000047407.17 ENSMUST00000190687.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4644;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000024053.11 ENSMUST00000024849.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3102;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000024053.11 ENSMUST00000024849.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3102;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000097625.1 ENSMUST00000180743.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000097625.1 ENSMUST00000180743.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000024053.11 ENSMUST00000232777.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3104;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000024053.11 ENSMUST00000232777.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3104;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000024053.11 ENSMUST00000233057.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3073;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000024053.11 ENSMUST00000233057.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3073;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000117137.1 ENSMUST00000233188.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1362;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000117137.1 ENSMUST00000233188.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1362;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000024053.11 ENSMUST00000233245.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2507;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000024053.11 ENSMUST00000233245.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2507;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000024053.11 ENSMUST00000233659.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2085;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000024053.11 ENSMUST00000233659.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2085;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 - ENSMUSG00000024053.11 ENSMUST00000233728.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3782;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71314063_AAAAA/-/AAAA chr17:71314063-71314067 AAAA ENSMUSG00000024053.11 ENSMUST00000233728.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3782;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71754128_-/T chr17:71754127-71754128 T ENSMUSG00000044375.8 ENSMUST00000057405.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1233;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71754128_-/T chr17:71754127-71754128 T ENSMUSG00000117075.1 ENSMUST00000233072.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1021;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71966211_-/CCCCCCCCCC chr17:71966210-71966211 CCCCCCCCCC ENSMUSG00000055471.7 ENSMUST00000086639.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_71966225_G/C chr17:71966225 C ENSMUSG00000055471.7 ENSMUST00000086639.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_72722796_-/ATAG chr17:72722795-72722796 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_72734369_G/A chr17:72734369 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_72763895_-/AAGG chr17:72763894-72763895 AAGG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_74109780_-/AAGA chr17:74109779-74109780 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_74438205_TTT/- chr17:74438205-74438207 - ENSMUSG00000039193.9 ENSMUST00000052124.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74438205_TTT/- chr17:74438205-74438207 - ENSMUSG00000117187.1 ENSMUST00000233026.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=78;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74438205_TTT/- chr17:74438205-74438207 - ENSMUSG00000039193.9 ENSMUST00000233637.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74438205_TTT/- chr17:74438205-74438207 - ENSMUSG00000039193.9 ENSMUST00000234086.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74521892_GTGTGT/-/GTGT chr17:74521892-74521897 - ENSMUSG00000117358.1 ENSMUST00000234285.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74521892_GTGTGT/-/GTGT chr17:74521892-74521897 GTGT ENSMUSG00000117358.1 ENSMUST00000234285.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74521892_GTGTGT/-/GTGT chr17:74521892-74521897 - ENSMUSG00000117358.1 ENSMUST00000234433.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74521892_GTGTGT/-/GTGT chr17:74521892-74521897 GTGT ENSMUSG00000117358.1 ENSMUST00000234433.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74521892_GTGTGT/-/GTGT chr17:74521892-74521897 - ENSMUSG00000117358.1 ENSMUST00000235009.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74521892_GTGTGT/-/GTGT chr17:74521892-74521897 GTGT ENSMUSG00000117358.1 ENSMUST00000235009.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000024073.16 ENSMUST00000180037.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2087;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000024073.16 ENSMUST00000182133.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2260;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000024073.16 ENSMUST00000182382.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2314;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000024073.16 ENSMUST00000182597.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2260;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000024073.16 ENSMUST00000182944.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2260;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000024073.16 ENSMUST00000183224.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2344;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000117358.1 ENSMUST00000234285.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2629;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000117358.1 ENSMUST00000234433.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74526207_AA/- chr17:74526207-74526208 - ENSMUSG00000117358.1 ENSMUST00000235009.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74827208_TGTG/- chr17:74827208-74827211 - ENSMUSG00000024078.7 ENSMUST00000024882.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74827208_TGTG/- chr17:74827208-74827211 - ENSMUSG00000024078.7 ENSMUST00000234568.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74827208_TGTG/- chr17:74827208-74827211 - ENSMUSG00000024078.7 ENSMUST00000234628.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_74827208_TGTG/- chr17:74827208-74827211 - ENSMUSG00000024078.7 ENSMUST00000234705.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_75748564_ACAC/- chr17:75748564-75748567 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_75838391_GTGT/- chr17:75838391-75838394 - ENSMUSG00000117587.1 ENSMUST00000235034.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4135;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_76147232_-/T chr17:76147231-76147232 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_76546836_G/T chr17:76546836 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_76578809_C/T chr17:76578809 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_76900100_G/A chr17:76900100 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77026092_G/T chr17:77026092 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77218510_TCTA/- chr17:77218510-77218513 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77344578_TT/-/T chr17:77344578-77344579 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77344578_TT/-/T chr17:77344578-77344579 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77781625_TGTGTG/-/TGTG chr17:77781625-77781630 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77781625_TGTGTG/-/TGTG chr17:77781625-77781630 TGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77798768_T/C chr17:77798768 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77906312_GTGTGTGT/-/GTGTGT chr17:77906312-77906319 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_77906312_GTGTGTGT/-/GTGTGT chr17:77906312-77906319 GTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_78609697_CACA/- chr17:78609697-78609700 - ENSMUSG00000024076.10 ENSMUST00000024880.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_78609697_CACA/- chr17:78609697-78609700 - ENSMUSG00000024076.10 ENSMUST00000232859.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_78651540_CA/C/AA chr17:78651540-78651541 C ENSMUSG00000024077.15 ENSMUST00000024881.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3055;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_78651540_CA/C/AA chr17:78651540-78651541 AA ENSMUSG00000024077.15 ENSMUST00000024881.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3055;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_78651540_CA/C/AA chr17:78651540-78651541 C ENSMUSG00000024077.15 ENSMUST00000145910.8 Transcript 3_prime_UTR_variant 7001-7002 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_78651540_CA/C/AA chr17:78651540-78651541 AA ENSMUSG00000024077.15 ENSMUST00000145910.8 Transcript 3_prime_UTR_variant 7001-7002 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_79243210_GTGT/- chr17:79243210-79243213 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_79422567_C/A chr17:79422567 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_79607994_GG/- chr17:79607994-79607995 - ENSMUSG00000036368.8 ENSMUST00000223924.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3868;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_79816535_A/C chr17:79816535 C ENSMUSG00000103091.1 ENSMUST00000195711.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_79816535_A/C chr17:79816535 C ENSMUSG00000117394.1 ENSMUST00000234236.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2843;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000068175.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000068175.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000066938.1 ENSMUST00000086549.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=557;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000066938.1 ENSMUST00000086549.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=557;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000223878.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000223878.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000224002.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=996;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000224002.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=996;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000224631.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4432;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000224631.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4432;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000224676.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000224676.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000224966.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=997;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000224966.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=997;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000225018.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2256;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000225018.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2256;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000225223.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1042;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000225223.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1042;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000225548.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000225548.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 - ENSMUSG00000054901.7 ENSMUST00000225658.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=997;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80372660_TT/-/T chr17:80372660-80372661 T ENSMUSG00000054901.7 ENSMUST00000225658.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=997;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_80788204_C/- chr17:80788204 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_81154088_TATG/- chr17:81154088-81154091 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_81926177_-/AAAT chr17:81926176-81926177 AAAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_82230776_-/TTTTTTTTTTTTTTTTTTTTTTTTTTTTT chr17:82230775-82230776 TTTTTTTTTTTTTTTTTTTTTTTTTTTTT ENSMUSG00000088817.1 ENSMUST00000158192.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1368;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_82722444_G/T chr17:82722444 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_82963348_CAA/C/AAA chr17:82963348-82963350 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_82963348_CAA/C/AAA chr17:82963348-82963350 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_82994880_-/TTTT chr17:82994879-82994880 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_83062751_-/ATAG chr17:83062750-83062751 ATAG ENSMUSG00000117399.1 ENSMUST00000234063.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83342428_A/T chr17:83342428 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_83504773_CACA/-/CA chr17:83504773-83504776 - ENSMUSG00000024248.14 ENSMUST00000025095.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83504773_CACA/-/CA chr17:83504773-83504776 CA ENSMUSG00000024248.14 ENSMUST00000025095.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83504773_CACA/-/CA chr17:83504773-83504776 - ENSMUSG00000024248.14 ENSMUST00000167741.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83504773_CACA/-/CA chr17:83504773-83504776 CA ENSMUSG00000024248.14 ENSMUST00000167741.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83504773_CACA/-/CA chr17:83504773-83504776 - ENSMUSG00000024248.14 ENSMUST00000234258.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83504773_CACA/-/CA chr17:83504773-83504776 CA ENSMUSG00000024248.14 ENSMUST00000234258.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83504773_CACA/-/CA chr17:83504773-83504776 - ENSMUSG00000024248.14 ENSMUST00000235085.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=267;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83504773_CACA/-/CA chr17:83504773-83504776 CA ENSMUSG00000024248.14 ENSMUST00000235085.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=267;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83553379_ACAC/- chr17:83553379-83553382 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_83610666_GAGA/-/GA chr17:83610666-83610669 - ENSMUSG00000045053.2 ENSMUST00000051482.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83610666_GAGA/-/GA chr17:83610666-83610669 GA ENSMUSG00000045053.2 ENSMUST00000051482.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83610666_GAGA/-/GA chr17:83610666-83610669 - ENSMUSG00000045053.2 ENSMUST00000234613.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83610666_GAGA/-/GA chr17:83610666-83610669 GA ENSMUSG00000045053.2 ENSMUST00000234613.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83894325_CACACACACGCGCGCGCGTACACATACACGCGCGCGCGCACG/- chr17:83894325-83894366 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_83925536_C/T chr17:83925536 T ENSMUSG00000117442.1 ENSMUST00000234364.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3930;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_83925542_C/T chr17:83925542 T ENSMUSG00000117442.1 ENSMUST00000234364.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3936;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_84660921_ACAC/- chr17:84660921-84660924 - ENSMUSG00000040505.13 ENSMUST00000066175.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_84660921_ACAC/- chr17:84660921-84660924 - ENSMUSG00000040505.13 ENSMUST00000163375.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_85316372_-/TCC chr17:85316371-85316372 TCC ENSMUSG00000071037.6 ENSMUST00000095188.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_85316383_T/C chr17:85316383 C ENSMUSG00000071037.6 ENSMUST00000095188.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_85580686_GTGT/-/GT chr17:85580686-85580689 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_85580686_GTGT/-/GT chr17:85580686-85580689 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_86946458_-/A chr17:86946457-86946458 A ENSMUSG00000053375.8 ENSMUST00000065758.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_86946458_-/A chr17:86946457-86946458 A ENSMUSG00000053375.8 ENSMUST00000233995.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_86946458_-/A chr17:86946457-86946458 A ENSMUSG00000117457.1 ENSMUST00000234807.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1748;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_86946458_-/A chr17:86946457-86946458 A ENSMUSG00000053375.8 ENSMUST00000235110.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87053305_ATAT/-/AT/ATATAT chr17:87053305-87053308 - ENSMUSG00000087736.1 ENSMUST00000157111.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=386;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87053305_ATAT/-/AT/ATATAT chr17:87053305-87053308 AT ENSMUSG00000087736.1 ENSMUST00000157111.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=386;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87053305_ATAT/-/AT/ATATAT chr17:87053305-87053308 ATATAT ENSMUSG00000087736.1 ENSMUST00000157111.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=386;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87253402_G/- chr17:87253402 - ENSMUSG00000024150.12 ENSMUST00000024963.10 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1041;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87253402_G/- chr17:87253402 - ENSMUSG00000024150.12 ENSMUST00000129616.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2386;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87253402_G/- chr17:87253402 - ENSMUSG00000024150.12 ENSMUST00000144236.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1256;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87253402_G/- chr17:87253402 - ENSMUSG00000024150.12 ENSMUST00000145895.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3356;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87253402_G/- chr17:87253402 - ENSMUSG00000024150.12 ENSMUST00000151155.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2568;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87253402_G/- chr17:87253402 - ENSMUSG00000024150.12 ENSMUST00000155904.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3829;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_87862658_ACAC/-/AC chr17:87862658-87862661 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_87862658_ACAC/-/AC chr17:87862658-87862661 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_88116509_-/AA chr17:88116508-88116509 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_88218793_-/TAAA chr17:88218792-88218793 TAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_88274634_AA/- chr17:88274634-88274635 - ENSMUSG00000117351.1 ENSMUST00000234514.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 - ENSMUSG00000034998.18 ENSMUST00000112238.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 GT ENSMUSG00000034998.18 ENSMUST00000112238.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 - ENSMUSG00000034998.18 ENSMUST00000134107.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 GT ENSMUSG00000034998.18 ENSMUST00000134107.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 - ENSMUSG00000034998.18 ENSMUST00000141052.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 GT ENSMUSG00000034998.18 ENSMUST00000141052.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 - ENSMUSG00000034998.18 ENSMUST00000155640.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88458517_GTGT/-/GT chr17:88458517-88458520 GT ENSMUSG00000034998.18 ENSMUST00000155640.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88608911_T/- chr17:88608911 - ENSMUSG00000033855.15 ENSMUST00000137138.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88608911_T/- chr17:88608911 - ENSMUSG00000033855.15 ENSMUST00000153613.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88608911_T/- chr17:88608911 - ENSMUSG00000117398.1 ENSMUST00000234525.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=367;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_88917157_GTGT/- chr17:88917157-88917160 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_89454280_ATAT/-/AT/ATATAT chr17:89454280-89454283 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_89454280_ATAT/-/AT/ATATAT chr17:89454280-89454283 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_89454280_ATAT/-/AT/ATATAT chr17:89454280-89454283 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_89846934_-/TT chr17:89846933-89846934 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_91401126_TCTC/-/TCTCTCTCTCTCTCTCTCTCTC chr17:91401126-91401129 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_91401126_TCTC/-/TCTCTCTCTCTCTCTCTCTCTC chr17:91401126-91401129 TCTCTCTCTCTCTCTCTCTCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_91747997_C/G chr17:91747997 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_92830336_C/T chr17:92830336 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_93318869_-/TTTTTTTTTTTTTT chr17:93318868-93318869 TTTTTTTTTTTTTT ENSMUSG00000117362.1 ENSMUST00000234454.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1607;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr17_93437834_TGTG/-/TG chr17:93437834-93437837 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_93437834_TGTG/-/TG chr17:93437834-93437837 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_93667478_AA/-/AAA chr17:93667478-93667479 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_93667478_AA/-/AAA chr17:93667478-93667479 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr17_94061140_C/T chr17:94061140 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_3004577_G/A chr18:3004577 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_3099093_C/A chr18:3099093 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_3106980_A/T chr18:3106980 T ENSMUSG00000117531.1 ENSMUST00000234774.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1584;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000025069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000025069.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000082141.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000082141.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000122958.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000122958.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000123672.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000123672.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000126578.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000126578.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000127601.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000127601.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000129435.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000129435.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000130047.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000130047.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000130455.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000130455.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000130599.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000130599.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000131899.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000131899.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000134027.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000134027.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000136961.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000136961.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000137568.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000137568.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000140912.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000140912.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000142690.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=61;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000142690.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=61;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000144496.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000144496.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000146265.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000146265.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000148305.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000148305.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000149266.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000149266.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000149803.7 Transcript 3_prime_UTR_variant 1185-1187 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000149803.7 Transcript 3_prime_UTR_variant 1185-1187 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000150235.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000150235.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000151311.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000151311.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000152108.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000152108.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000152900.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000152900.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000154135.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000154135.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000154470.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000154470.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000154715.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000154715.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000156234.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000156234.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000156929.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000156929.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 C ENSMUSG00000063889.16 ENSMUST00000165086.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3294419_CAA/C/AAA chr18:3294419-3294421 AAA ENSMUSG00000063889.16 ENSMUST00000165086.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3484423_TTTT/-/TTT chr18:3484423-3484426 - ENSMUSG00000117469.1 ENSMUST00000234804.1 Transcript splice_region_variant,intron_variant,non_coding_transcript_variant - - - - - - IMPACT=LOW;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3484423_TTTT/-/TTT chr18:3484423-3484426 TTT ENSMUSG00000117469.1 ENSMUST00000234804.1 Transcript splice_region_variant,intron_variant,non_coding_transcript_variant - - - - - - IMPACT=LOW;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_3547074_AA/- chr18:3547074-3547075 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_3548851_-/TTCT chr18:3548850-3548851 TTCT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_4504245_A/T chr18:4504245 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_4808727_AAA/-/AAAA chr18:4808727-4808729 - ENSMUSG00000097043.1 ENSMUST00000180904.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3757;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_4808727_AAA/-/AAAA chr18:4808727-4808729 AAAA ENSMUSG00000097043.1 ENSMUST00000180904.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3757;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000025079.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000126977.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000127297.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000131210.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000131609.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000138258.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000140448.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000143254.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5052938_G/A chr18:5052938 A ENSMUSG00000024236.18 ENSMUST00000210707.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5358919_TGTG/-/TG chr18:5358919-5358922 - ENSMUSG00000117520.1 ENSMUST00000234056.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5358919_TGTG/-/TG chr18:5358919-5358922 TG ENSMUSG00000117520.1 ENSMUST00000234056.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000025081.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000159390.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000159477.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000160522.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000160910.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000161295.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000162892.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000175739.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000175925.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000177070.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_5629260_AA/- chr18:5629260-5629261 - ENSMUSG00000024238.15 ENSMUST00000224200.2 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_6691199_T/A chr18:6691199 A ENSMUSG00000117620.1 ENSMUST00000234799.1 Transcript non_coding_transcript_exon_variant 119 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7093149_T/A chr18:7093149 A ENSMUSG00000061802.6 ENSMUST00000081275.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7093149_T/A chr18:7093149 A ENSMUSG00000061802.6 ENSMUST00000234788.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000094334.2 ENSMUST00000072582.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3120;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000115869.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234366.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234444.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234510.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234571.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234599.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234639.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234812.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000234874.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000235093.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_7585040_A/G chr18:7585040 G ENSMUSG00000057440.8 ENSMUST00000235095.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_8035131_TCTC/- chr18:8035131-8035134 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_8331852_-/G chr18:8331851-8331852 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_8872111_TCTC/-/TC chr18:8872111-8872114 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_8872111_TCTC/-/TC chr18:8872111-8872114 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_9741178_TT/-/T/TTT chr18:9741178-9741179 - ENSMUSG00000036103.9 ENSMUST00000040069.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_9741178_TT/-/T/TTT chr18:9741178-9741179 T ENSMUSG00000036103.9 ENSMUST00000040069.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_9741178_TT/-/T/TTT chr18:9741178-9741179 TTT ENSMUSG00000036103.9 ENSMUST00000040069.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_9741178_TT/-/T/TTT chr18:9741178-9741179 - ENSMUSG00000036103.9 ENSMUST00000234965.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_9741178_TT/-/T/TTT chr18:9741178-9741179 T ENSMUSG00000036103.9 ENSMUST00000234965.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_9741178_TT/-/T/TTT chr18:9741178-9741179 TTT ENSMUSG00000036103.9 ENSMUST00000234965.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_9772900_T/- chr18:9772900 - ENSMUSG00000036103.9 ENSMUST00000040069.9 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_9772900_T/- chr18:9772900 - ENSMUSG00000036103.9 ENSMUST00000234965.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_10299889_TT/- chr18:10299889-10299890 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_11070601_A/T chr18:11070601 T ENSMUSG00000005836.10 ENSMUST00000047762.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_11135242_TGTG/- chr18:11135242-11135245 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_11201022_G/C chr18:11201022 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_11234008_CC/- chr18:11234008-11234009 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_11388352_CACA/-/CA chr18:11388352-11388355 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_11388352_CACA/-/CA chr18:11388352-11388355 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_11599960_C/G chr18:11599960 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_11832985_-/TTTTTTTTTTTTTTTTT chr18:11832984-11832985 TTTTTTTTTTTTTTTTT ENSMUSG00000097440.2 ENSMUST00000180860.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_11880442_TTTT/- chr18:11880442-11880445 - ENSMUSG00000040957.15 ENSMUST00000046948.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_11880442_TTTT/- chr18:11880442-11880445 - ENSMUSG00000040957.15 ENSMUST00000171109.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_11880442_TTTT/- chr18:11880442-11880445 - ENSMUSG00000040957.15 ENSMUST00000225430.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_13081371_TT/- chr18:13081371-13081372 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_13499351_A/G chr18:13499351 G ENSMUSG00000117608.1 ENSMUST00000234018.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_13594847_AA/-/A chr18:13594847-13594848 - ENSMUSG00000117608.1 ENSMUST00000234018.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_13594847_AA/-/A chr18:13594847-13594848 A ENSMUSG00000117608.1 ENSMUST00000234018.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_13594847_AA/-/A chr18:13594847-13594848 - ENSMUSG00000117608.1 ENSMUST00000234112.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=636;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_13594847_AA/-/A chr18:13594847-13594848 A ENSMUSG00000117608.1 ENSMUST00000234112.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=636;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_13998347_AAA/- chr18:13998347-13998349 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000040924.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000040964.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000092041.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000234120.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000234224.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000234524.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000234737.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000234997.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14668911_ACAC/- chr18:14668911-14668914 - ENSMUSG00000037013.16 ENSMUST00000235043.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14973101_A/G chr18:14973101 G ENSMUSG00000036225.15 ENSMUST00000025992.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14973101_A/G chr18:14973101 G ENSMUSG00000036225.15 ENSMUST00000168989.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14973101_A/G chr18:14973101 G ENSMUSG00000036225.15 ENSMUST00000233993.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14973101_A/G chr18:14973101 G ENSMUSG00000036225.15 ENSMUST00000234221.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_14973101_A/G chr18:14973101 G ENSMUSG00000036225.15 ENSMUST00000234864.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=954;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_16191519_ACAC/-/AC chr18:16191519-16191522 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_16191519_ACAC/-/AC chr18:16191519-16191522 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_16606437_-/TTTC chr18:16606436-16606437 TTTC ENSMUSG00000024304.14 ENSMUST00000025166.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_16606437_-/TTTC chr18:16606436-16606437 TTTC ENSMUSG00000024304.14 ENSMUST00000115850.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_17440192_C/T chr18:17440192 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_18450991_A/- chr18:18450991 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_18768089_C/A chr18:18768089 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_18923456_TTTTGTTTTG/- chr18:18923456-18923465 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_19118346_TT/- chr18:19118346-19118347 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_19786588_TGTG/- chr18:19786588-19786591 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_19948403_A/G chr18:19948403 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_19964776_ACAC/-/AC chr18:19964776-19964779 - ENSMUSG00000059898.9 ENSMUST00000115848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_19964776_ACAC/-/AC chr18:19964776-19964779 AC ENSMUSG00000059898.9 ENSMUST00000115848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_19964776_ACAC/-/AC chr18:19964776-19964779 - ENSMUSG00000059898.9 ENSMUST00000225110.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_19964776_ACAC/-/AC chr18:19964776-19964779 AC ENSMUSG00000059898.9 ENSMUST00000225110.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_19968101_TT/-/TTT chr18:19968101-19968102 - ENSMUSG00000059898.9 ENSMUST00000115848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_19968101_TT/-/TTT chr18:19968101-19968102 TTT ENSMUSG00000059898.9 ENSMUST00000115848.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_19968101_TT/-/TTT chr18:19968101-19968102 - ENSMUSG00000059898.9 ENSMUST00000225110.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_19968101_TT/-/TTT chr18:19968101-19968102 TTT ENSMUSG00000059898.9 ENSMUST00000225110.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_20357681_TTT/-/TTTT chr18:20357681-20357683 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_20357681_TTT/-/TTTT chr18:20357681-20357683 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_20444560_TGTG/- chr18:20444560-20444563 - ENSMUSG00000001804.9 ENSMUST00000019426.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_21214821_T/- chr18:21214821 - ENSMUSG00000042680.8 ENSMUST00000049260.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_21214821_T/- chr18:21214821 - ENSMUSG00000042680.8 ENSMUST00000234115.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_21452978_TGTG/-/TG chr18:21452978-21452981 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_21452978_TGTG/-/TG chr18:21452978-21452981 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 - ENSMUSG00000041923.15 ENSMUST00000069215.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGT ENSMUSG00000041923.15 ENSMUST00000069215.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGTGTGT ENSMUSG00000041923.15 ENSMUST00000069215.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 - ENSMUSG00000041923.15 ENSMUST00000081423.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGT ENSMUSG00000041923.15 ENSMUST00000081423.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGTGTGT ENSMUSG00000041923.15 ENSMUST00000081423.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 - ENSMUSG00000041923.15 ENSMUST00000092015.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGT ENSMUSG00000041923.15 ENSMUST00000092015.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGTGTGT ENSMUSG00000041923.15 ENSMUST00000092015.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 - ENSMUSG00000041923.15 ENSMUST00000097651.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGT ENSMUSG00000041923.15 ENSMUST00000097651.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGTGTGT ENSMUSG00000041923.15 ENSMUST00000097651.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 - ENSMUSG00000041923.15 ENSMUST00000164186.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGT ENSMUSG00000041923.15 ENSMUST00000164186.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGTGTGT ENSMUSG00000041923.15 ENSMUST00000164186.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 - ENSMUSG00000041923.15 ENSMUST00000164893.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGT ENSMUSG00000041923.15 ENSMUST00000164893.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_22773929_GTGTGT/-/GTGT/GTGTGTGT chr18:22773929-22773934 GTGTGTGT ENSMUSG00000041923.15 ENSMUST00000164893.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24349766_GGGAGAGGGAGAGGGAGAGGGATAGGGAGGGGGAGGGGGAGGGGAGGGAGAGGGAGAGGGAGAGGAGGGGGAGAGGGAGA/- chr18:24349766-24349845 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_24667755_TT/- chr18:24667755-24667756 - ENSMUSG00000039616.10 ENSMUST00000068006.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24667755_TT/- chr18:24667755-24667756 - ENSMUSG00000039616.10 ENSMUST00000234253.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24828492_ACAC/-/ACACAC chr18:24828492-24828495 - ENSMUSG00000034295.10 ENSMUST00000037097.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24828492_ACAC/-/ACACAC chr18:24828492-24828495 ACACAC ENSMUSG00000034295.10 ENSMUST00000037097.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24828492_ACAC/-/ACACAC chr18:24828492-24828495 - ENSMUSG00000034295.10 ENSMUST00000234526.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24828492_ACAC/-/ACACAC chr18:24828492-24828495 ACACAC ENSMUSG00000034295.10 ENSMUST00000234526.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24828492_ACAC/-/ACACAC chr18:24828492-24828495 - ENSMUSG00000034295.10 ENSMUST00000234834.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_24828492_ACAC/-/ACACAC chr18:24828492-24828495 ACACAC ENSMUSG00000034295.10 ENSMUST00000234834.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_25582625_-/TTCTTTCT chr18:25582624-25582625 TTCTTTCT ENSMUSG00000024268.16 ENSMUST00000025117.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_25582625_-/TTCTTTCT chr18:25582624-25582625 TTCTTTCT ENSMUSG00000024268.16 ENSMUST00000115816.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_25582625_-/TTCTTTCT chr18:25582624-25582625 TTCTTTCT ENSMUSG00000024268.16 ENSMUST00000223704.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_25582625_-/TTCTTTCT chr18:25582624-25582625 TTCTTTCT ENSMUSG00000024268.16 ENSMUST00000224553.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_25582625_-/TTCTTTCT chr18:25582624-25582625 TTCTTTCT ENSMUSG00000024268.16 ENSMUST00000225477.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_25582625_-/TTCTTTCT chr18:25582624-25582625 TTCTTTCT ENSMUSG00000024268.16 ENSMUST00000225927.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_25935684_TCTC/- chr18:25935684-25935687 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_27385523_AA/-/A chr18:27385523-27385524 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_27385523_AA/-/A chr18:27385523-27385524 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_27394966_ACAC/- chr18:27394966-27394969 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_28555397_ATAT/- chr18:28555397-28555400 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_28571498_TT/-/TTT chr18:28571498-28571499 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_28571498_TT/-/TTT chr18:28571498-28571499 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_29927295_TATA/-/TA chr18:29927295-29927298 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_29927295_TATA/-/TA chr18:29927295-29927298 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_30444186_C/A chr18:30444186 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_30784289_TTTTT/-/TTTT chr18:30784289-30784293 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_30784289_TTTTT/-/TTTT chr18:30784289-30784293 TTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_31215099_-/AAGA chr18:31215098-31215099 AAGA ENSMUSG00000057455.12 ENSMUST00000082070.12 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_31215099_-/AAGA chr18:31215098-31215099 AAGA ENSMUSG00000057455.12 ENSMUST00000139924.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_31215099_-/AAGA chr18:31215098-31215099 AAGA ENSMUSG00000057455.12 ENSMUST00000153060.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_31215099_-/AAGA chr18:31215098-31215099 AAGA ENSMUSG00000057455.12 ENSMUST00000153196.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2366;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_31488315_ATAT/- chr18:31488315-31488318 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_31503604_AA/-/A/AAA chr18:31503604-31503605 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_31503604_AA/-/A/AAA chr18:31503604-31503605 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_31503604_AA/-/A/AAA chr18:31503604-31503605 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000171765.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000171765.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000234198.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=768;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000234198.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=768;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000117606.1 ENSMUST00000234291.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4213;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000117606.1 ENSMUST00000234291.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4213;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000234375.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000234375.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000234386.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000234386.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000234649.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000234649.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000234651.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000234651.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000234657.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000234657.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 - ENSMUSG00000024386.9 ENSMUST00000234746.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32136514_AAAA/-/AAA chr18:32136514-32136517 AAA ENSMUSG00000024386.9 ENSMUST00000234746.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_32786744_T/G chr18:32786744 G ENSMUSG00000097553.1 ENSMUST00000181632.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_33483048_T/A chr18:33483048 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_33705709_ACAC/- chr18:33705709-33705712 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_33856912_ACACACACACACACACAAACACACAC/- chr18:33856912-33856937 - ENSMUSG00000024376.6 ENSMUST00000025234.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_35078371_TGTG/-/TG chr18:35078371-35078374 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_35078371_TGTG/-/TG chr18:35078371-35078374 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_35702354_T/A chr18:35702354 A ENSMUSG00000024350.5 ENSMUST00000025208.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_35702354_T/A chr18:35702354 A ENSMUSG00000073598.3 ENSMUST00000143778.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=871;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36060167_ACAC/- chr18:36060167-36060170 - ENSMUSG00000060275.12 ENSMUST00000115705.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36060167_ACAC/- chr18:36060167-36060170 - ENSMUSG00000060275.12 ENSMUST00000115712.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36060167_ACAC/- chr18:36060167-36060170 - ENSMUSG00000060275.12 ENSMUST00000115713.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36229065_CACA/-/CA chr18:36229065-36229068 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_36229065_CACA/-/CA chr18:36229065-36229068 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_36596753_C/T chr18:36596753 T ENSMUSG00000024483.18 ENSMUST00000006205.13 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36596753_C/T chr18:36596753 T ENSMUSG00000024483.18 ENSMUST00000142977.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36596753_C/T chr18:36596753 T ENSMUSG00000024483.18 ENSMUST00000152060.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4047;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36596753_C/T chr18:36596753 T ENSMUSG00000024483.18 ENSMUST00000155329.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36767648_TTTA/- chr18:36767648-36767651 - ENSMUSG00000001380.6 ENSMUST00000001416.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36767648_TTTA/- chr18:36767648-36767651 - ENSMUSG00000042660.7 ENSMUST00000049323.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3940;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36767648_TTTA/- chr18:36767648-36767651 - ENSMUSG00000044595.10 ENSMUST00000061522.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1450;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36767648_TTTA/- chr18:36767648-36767651 - ENSMUSG00000044595.10 ENSMUST00000124038.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1450;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_36767648_TTTA/- chr18:36767648-36767651 - ENSMUSG00000044595.10 ENSMUST00000155827.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1434;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37281728_CC/- chr18:37281728-37281729 - ENSMUSG00000103458.1 ENSMUST00000115661.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37281728_CC/- chr18:37281728-37281729 - ENSMUSG00000103125.1 ENSMUST00000193984.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37281728_CC/- chr18:37281728-37281729 - ENSMUSG00000102836.1 ENSMUST00000194544.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103088.1 ENSMUST00000003599.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000102428.1 ENSMUST00000044851.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000102742.1 ENSMUST00000061279.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103897.1 ENSMUST00000066149.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000104346.1 ENSMUST00000073447.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000102440.1 ENSMUST00000091935.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103458.1 ENSMUST00000115661.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103472.1 ENSMUST00000192511.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103749.1 ENSMUST00000192535.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103037.1 ENSMUST00000192931.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000102222.1 ENSMUST00000193404.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103567.1 ENSMUST00000193414.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103332.1 ENSMUST00000193869.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103125.1 ENSMUST00000193984.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103144.1 ENSMUST00000194190.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103677.1 ENSMUST00000194418.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000102836.1 ENSMUST00000194544.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000104063.1 ENSMUST00000194928.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000102748.1 ENSMUST00000195112.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103585.1 ENSMUST00000195363.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103081.2 ENSMUST00000195764.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103793.1 ENSMUST00000195823.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_37798521_GTGTGT/- chr18:37798521-37798526 - ENSMUSG00000103081.2 ENSMUST00000208907.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_38055526_TT/- chr18:38055526-38055527 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_38323003_ACAC/-/AC chr18:38323003-38323006 - ENSMUSG00000052102.14 ENSMUST00000063814.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4552;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_38323003_ACAC/-/AC chr18:38323003-38323006 AC ENSMUSG00000052102.14 ENSMUST00000063814.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4552;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_38676989_T/C chr18:38676989 C ENSMUSG00000036452.17 ENSMUST00000127448.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_38676989_T/C chr18:38676989 C ENSMUSG00000036452.17 ENSMUST00000134388.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_38676989_T/C chr18:38676989 C ENSMUSG00000036452.17 ENSMUST00000148850.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_40597343_-/AC chr18:40597342-40597343 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_41100180_ACAC/- chr18:41100180-41100183 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_41337581_T/C chr18:41337581 C ENSMUSG00000105169.1 ENSMUST00000196225.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4700;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_41337760_A/C chr18:41337760 C ENSMUSG00000105169.1 ENSMUST00000196225.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4521;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_41460204_TTT/- chr18:41460204-41460206 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_41464988_TA/CT chr18:41464988-41464989 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_42814333_T/C chr18:42814333 C ENSMUSG00000024500.18 ENSMUST00000025377.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42814333_T/C chr18:42814333 C ENSMUSG00000024500.18 ENSMUST00000117687.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42814333_T/C chr18:42814333 C ENSMUSG00000024500.18 ENSMUST00000120632.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42814333_T/C chr18:42814333 C ENSMUSG00000024500.18 ENSMUST00000136118.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42814333_T/C chr18:42814333 C ENSMUSG00000024500.18 ENSMUST00000153737.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42814333_T/C chr18:42814333 C ENSMUSG00000024500.18 ENSMUST00000155262.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42867978_C/A chr18:42867978 A ENSMUSG00000024500.18 ENSMUST00000025377.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42867978_C/A chr18:42867978 A ENSMUSG00000024500.18 ENSMUST00000117687.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42867978_C/A chr18:42867978 A ENSMUSG00000024500.18 ENSMUST00000120632.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42867978_C/A chr18:42867978 A ENSMUSG00000024500.18 ENSMUST00000136118.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42867978_C/A chr18:42867978 A ENSMUSG00000024500.18 ENSMUST00000153737.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42867978_C/A chr18:42867978 A ENSMUSG00000024500.18 ENSMUST00000155262.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42930090_TCTC/- chr18:42930090-42930093 - ENSMUSG00000024500.18 ENSMUST00000025377.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_42930090_TCTC/- chr18:42930090-42930093 - ENSMUSG00000024500.18 ENSMUST00000153737.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_43109321_-/TATC chr18:43109320-43109321 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_43327556_GAGA/- chr18:43327556-43327559 - ENSMUSG00000024501.19 ENSMUST00000025379.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_43327556_GAGA/- chr18:43327556-43327559 - ENSMUSG00000024501.19 ENSMUST00000118043.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_43327556_GAGA/- chr18:43327556-43327559 - ENSMUSG00000024501.19 ENSMUST00000121805.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_43327556_GAGA/- chr18:43327556-43327559 - ENSMUSG00000024501.19 ENSMUST00000124207.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2132;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_43327556_GAGA/- chr18:43327556-43327559 - ENSMUSG00000024501.19 ENSMUST00000135547.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3526;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_43602359_GTGT/- chr18:43602359-43602362 - ENSMUSG00000024502.9 ENSMUST00000082254.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_43932495_AA/- chr18:43932495-43932496 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_44574353_TT/- chr18:44574353-44574354 - ENSMUSG00000071856.10 ENSMUST00000089874.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_44574353_TT/- chr18:44574353-44574354 - ENSMUSG00000071856.10 ENSMUST00000164666.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_44683960_TA/T/AA chr18:44683960-44683961 T ENSMUSG00000071856.10 ENSMUST00000089874.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_44683960_TA/T/AA chr18:44683960-44683961 AA ENSMUSG00000071856.10 ENSMUST00000089874.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_44903359_GTGT/- chr18:44903359-44903362 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_45765155_TAC/T/CAC chr18:45765155-45765157 T ENSMUSG00000098284.7 ENSMUST00000184346.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_45765155_TAC/T/CAC chr18:45765155-45765157 CAC ENSMUSG00000098284.7 ENSMUST00000184346.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_45765155_TAC/T/CAC chr18:45765155-45765157 T ENSMUSG00000098284.7 ENSMUST00000184994.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_45765155_TAC/T/CAC chr18:45765155-45765157 CAC ENSMUSG00000098284.7 ENSMUST00000184994.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_46347301_TATA/-/TA chr18:46347301-46347304 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_46347301_TATA/-/TA chr18:46347301-46347304 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_46695690_-/AAGA chr18:46695689-46695690 AAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_46807472_T/G chr18:46807472 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_47135098_TG/T/GG chr18:47135098-47135099 T ENSMUSG00000042705.9 ENSMUST00000234124.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47135098_TG/T/GG chr18:47135098-47135099 GG ENSMUSG00000042705.9 ENSMUST00000234124.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47370258_TCTC/- chr18:47370258-47370261 - ENSMUSG00000019647.16 ENSMUST00000019791.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1428;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47370258_TCTC/- chr18:47370258-47370261 - ENSMUSG00000019647.16 ENSMUST00000076043.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1812;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47370258_TCTC/- chr18:47370258-47370261 - ENSMUSG00000019647.16 ENSMUST00000115449.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47370258_TCTC/- chr18:47370258-47370261 - ENSMUSG00000019647.16 ENSMUST00000135790.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1810;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47370258_TCTC/- chr18:47370258-47370261 - ENSMUSG00000019647.16 ENSMUST00000141224.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1390;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47370258_TCTC/- chr18:47370258-47370261 - ENSMUSG00000019647.16 ENSMUST00000144223.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1990;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47370258_TCTC/- chr18:47370258-47370261 - ENSMUSG00000019647.16 ENSMUST00000151382.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1388;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_47763590_AA/- chr18:47763590-47763591 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_48849631_AC/A/CC chr18:48849631-48849632 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_48849631_AC/A/CC chr18:48849631-48849632 CC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_49493081_ACAC/- chr18:49493081-49493084 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_49819873_ACAC/- chr18:49819873-49819876 - ENSMUSG00000100134.1 ENSMUST00000186872.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1915;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_49900532_ACAC/-/ACACAC chr18:49900532-49900535 - ENSMUSG00000037416.13 ENSMUST00000041772.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_49900532_ACAC/-/ACACAC chr18:49900532-49900535 ACACAC ENSMUSG00000037416.13 ENSMUST00000041772.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_49900532_ACAC/-/ACACAC chr18:49900532-49900535 - ENSMUSG00000037416.13 ENSMUST00000180611.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_49900532_ACAC/-/ACACAC chr18:49900532-49900535 ACACAC ENSMUSG00000037416.13 ENSMUST00000180611.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_49900532_ACAC/-/ACACAC chr18:49900532-49900535 - ENSMUSG00000037416.13 ENSMUST00000181907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_49900532_ACAC/-/ACACAC chr18:49900532-49900535 ACACAC ENSMUSG00000037416.13 ENSMUST00000181907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_50253403_T/A chr18:50253403 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_50664764_A/G chr18:50664764 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_51804631_ACAC/-/AC chr18:51804631-51804634 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_51804631_ACAC/-/AC chr18:51804631-51804634 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_51817858_GTGTGTGTGTATGTGTGTGTGTGTGTGAGTGTGTATGTATGTGTGTGTGTGA/- chr18:51817858-51817909 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_52093875_-/GTGT chr18:52093874-52093875 GTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_52396049_A/C chr18:52396049 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_52396054_A/C chr18:52396054 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_53431929_CACA/-/CA chr18:53431929-53431932 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_53431929_CACA/-/CA chr18:53431929-53431932 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_53633952_AA/-/AAA chr18:53633952-53633953 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_53633952_AA/-/AAA chr18:53633952-53633953 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_54252257_TCTC/-/TC chr18:54252257-54252260 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_54252257_TCTC/-/TC chr18:54252257-54252260 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_55068678_TTT/- chr18:55068678-55068680 - ENSMUSG00000096948.1 ENSMUST00000181538.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_55068678_TTT/- chr18:55068678-55068680 - ENSMUSG00000096948.1 ENSMUST00000181765.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_55571248_-/CTT chr18:55571247-55571248 CTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_57177793_-/TATC chr18:57177792-57177793 TATC ENSMUSG00000024593.15 ENSMUST00000075770.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_57177793_-/TATC chr18:57177792-57177793 TATC ENSMUSG00000024593.15 ENSMUST00000139892.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_57232981_-/CCCCCCC chr18:57232980-57232981 CCCCCCC ENSMUSG00000024593.15 ENSMUST00000075770.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_57232981_-/CCCCCCC chr18:57232980-57232981 CCCCCCC ENSMUSG00000024593.15 ENSMUST00000139892.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_57232986_A/C chr18:57232986 C ENSMUSG00000024593.15 ENSMUST00000075770.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_57232986_A/C chr18:57232986 C ENSMUSG00000024593.15 ENSMUST00000139892.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_57786777_-/CTTT chr18:57786776-57786777 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_58462326_AC/- chr18:58462326-58462327 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_58922986_G/A chr18:58922986 A ENSMUSG00000053441.4 ENSMUST00000052907.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_59083062_TATA/- chr18:59083062-59083065 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_59179068_G/A chr18:59179068 A ENSMUSG00000058152.7 ENSMUST00000080721.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_59730009_G/A chr18:59730009 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_59878283_GAGAGAGA/- chr18:59878283-59878290 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_59954997_C/T chr18:59954997 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_60489225_TATA/-/TA chr18:60489225-60489228 - ENSMUSG00000038059.6 ENSMUST00000042710.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60489225_TATA/-/TA chr18:60489225-60489228 TA ENSMUSG00000038059.6 ENSMUST00000042710.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000097566.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000115318.3 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000123288.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4401;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000128528.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000130044.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000130360.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000143275.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=501;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000155195.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=498;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_60599708_-/AAAT chr18:60599707-60599708 AAAT ENSMUSG00000043079.17 ENSMUST00000160395.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4552;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_61074270_-/CTTT chr18:61074269-61074270 CTTT ENSMUSG00000024620.11 ENSMUST00000025522.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_61074270_-/CTTT chr18:61074269-61074270 CTTT ENSMUSG00000024620.11 ENSMUST00000115274.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_61418839_A/G chr18:61418839 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_61441604_-/GATA chr18:61441603-61441604 GATA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_62293145_G/C chr18:62293145 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_62293171_A/G chr18:62293171 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_62825507_ATAT/-/AT chr18:62825507-62825510 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_62825507_ATAT/-/AT chr18:62825507-62825510 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_63420276_CTCT/- chr18:63420276-63420279 - ENSMUSG00000097980.1 ENSMUST00000183218.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_63475012_G/A chr18:63475012 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_63475014_C/G chr18:63475014 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_63842710_-/T chr18:63842709-63842710 T ENSMUSG00000040560.9 ENSMUST00000072726.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_64115800_TCTC/- chr18:64115800-64115803 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_64357374_TATA/- chr18:64357374-64357377 - ENSMUSG00000045991.18 ENSMUST00000115145.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_64357374_TATA/- chr18:64357374-64357377 - ENSMUSG00000045991.18 ENSMUST00000175965.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_64586224_TT/-/TTT chr18:64586224-64586225 - ENSMUSG00000039529.8 ENSMUST00000025482.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_64586224_TT/-/TTT chr18:64586224-64586225 TTT ENSMUSG00000039529.8 ENSMUST00000025482.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_64675976_CTCT/- chr18:64675976-64675979 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_65514798_A/G chr18:65514798 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_65643790_ACAC/-/AC chr18:65643790-65643793 - ENSMUSG00000042439.12 ENSMUST00000049016.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 AC ENSMUSG00000042439.12 ENSMUST00000049016.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 - ENSMUSG00000042439.12 ENSMUST00000169679.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 AC ENSMUSG00000042439.12 ENSMUST00000169679.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 - ENSMUSG00000042439.12 ENSMUST00000182478.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 AC ENSMUSG00000042439.12 ENSMUST00000182478.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 - ENSMUSG00000042439.12 ENSMUST00000182852.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 AC ENSMUSG00000042439.12 ENSMUST00000182852.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 - ENSMUSG00000042439.12 ENSMUST00000183184.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 AC ENSMUSG00000042439.12 ENSMUST00000183184.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 - ENSMUSG00000042439.12 ENSMUST00000183303.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3100;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65643790_ACAC/-/AC chr18:65643790-65643793 AC ENSMUSG00000042439.12 ENSMUST00000183303.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3100;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_65794355_CACA/-/CACACA chr18:65794355-65794358 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_65794355_CACA/-/CACACA chr18:65794355-65794358 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_66016209_AA/-/A chr18:66016209-66016210 - ENSMUSG00000041891.15 ENSMUST00000143990.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_66016209_AA/-/A chr18:66016209-66016210 A ENSMUSG00000041891.15 ENSMUST00000143990.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_66016209_AA/-/A chr18:66016209-66016210 - ENSMUSG00000041891.15 ENSMUST00000150133.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_66016209_AA/-/A chr18:66016209-66016210 A ENSMUSG00000041891.15 ENSMUST00000150133.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_66522717_T/C chr18:66522717 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_66751396_A/G chr18:66751396 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_66751398_AAA/GGG chr18:66751398-66751400 GGG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_67079287_G/A chr18:67079287 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_67084525_T/A chr18:67084525 A ENSMUSG00000024524.16 ENSMUST00000025402.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3811;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_67251097_AAA/- chr18:67251097-67251099 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_67763094_A/T chr18:67763094 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_67763112_C/A chr18:67763112 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_67925729_GAGA/- chr18:67925729-67925732 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_68039153_TT/- chr18:68039153-68039154 - ENSMUSG00000024544.8 ENSMUST00000063775.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_68241539_GG/- chr18:68241539-68241540 - ENSMUSG00000024544.8 ENSMUST00000063775.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_68443904_CAG/GAG/C chr18:68443904-68443906 GAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_68443904_CAG/GAG/C chr18:68443904-68443906 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_68645624_GTGT/- chr18:68645624-68645627 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_68725123_ACAC/-/AC chr18:68725123-68725126 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_68725123_ACAC/-/AC chr18:68725123-68725126 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_69272714_GATA/- chr18:69272714-69272717 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_69744647_-/CTAT chr18:69744646-69744647 CTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_69796436_-/TAA chr18:69796435-69796436 TAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_70250523_AGTAAGTA/- chr18:70250523-70250530 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_70494086_A/C chr18:70494086 C ENSMUSG00000079608.10 ENSMUST00000114959.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_70494086_A/C chr18:70494086 C ENSMUSG00000079608.10 ENSMUST00000164223.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_70494086_A/C chr18:70494086 C ENSMUSG00000079608.10 ENSMUST00000168249.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_70494086_A/C chr18:70494086 C ENSMUSG00000079608.10 ENSMUST00000173612.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_70494086_A/C chr18:70494086 C ENSMUSG00000079608.10 ENSMUST00000174118.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_70494086_A/C chr18:70494086 C ENSMUSG00000079608.10 ENSMUST00000174667.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71294803_AAA/-/AA chr18:71294803-71294805 - ENSMUSG00000060534.15 ENSMUST00000073379.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71294803_AAA/-/AA chr18:71294803-71294805 AA ENSMUSG00000060534.15 ENSMUST00000073379.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71294803_AAA/-/AA chr18:71294803-71294805 - ENSMUSG00000060534.15 ENSMUST00000114943.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71294803_AAA/-/AA chr18:71294803-71294805 AA ENSMUSG00000060534.15 ENSMUST00000114943.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71622032_TT/- chr18:71622032-71622033 - ENSMUSG00000060534.15 ENSMUST00000073379.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71622032_TT/- chr18:71622032-71622033 - ENSMUSG00000060534.15 ENSMUST00000114943.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71784797_-/AAGA chr18:71784796-71784797 AAGA ENSMUSG00000060534.15 ENSMUST00000073379.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_71784797_-/AAGA chr18:71784796-71784797 AAGA ENSMUSG00000060534.15 ENSMUST00000114943.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_72577051_G/A chr18:72577051 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_72940367_T/C chr18:72940367 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_72940378_G/C chr18:72940378 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_73576431_TGTG/- chr18:73576431-73576434 - ENSMUSG00000037253.8 ENSMUST00000091852.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_73909340_-/ACAGCA chr18:73909339-73909340 ACAGCA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_73919745_A/T chr18:73919745 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_73919949_T/A chr18:73919949 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_74070029_AGAA/- chr18:74070029-74070032 - ENSMUSG00000053861.1 ENSMUST00000066583.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4445;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_74070029_AGAA/- chr18:74070029-74070032 - ENSMUSG00000024558.12 ENSMUST00000160601.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4670;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_74624709_G/A chr18:74624709 A ENSMUSG00000025885.18 ENSMUST00000074157.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_74624709_G/A chr18:74624709 A ENSMUSG00000025885.18 ENSMUST00000120161.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_74624709_G/A chr18:74624709 A ENSMUSG00000025885.18 ENSMUST00000121875.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_74984389_CACG/- chr18:74984389-74984392 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_75230624_TT/-/T chr18:75230624-75230625 - ENSMUSG00000035765.9 ENSMUST00000039608.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_75230624_TT/-/T chr18:75230624-75230625 T ENSMUSG00000035765.9 ENSMUST00000039608.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_75514501_C/A chr18:75514501 A ENSMUSG00000052928.8 ENSMUST00000165559.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_75514501_C/A chr18:75514501 A ENSMUSG00000097712.1 ENSMUST00000181913.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=144;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_75534157_TT/-/T chr18:75534157-75534158 - ENSMUSG00000052928.8 ENSMUST00000165559.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_75534157_TT/-/T chr18:75534157-75534158 T ENSMUSG00000052928.8 ENSMUST00000165559.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_76572686_TATA/- chr18:76572686-76572689 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000026486.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000122984.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000123650.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000126153.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000135029.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000137354.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000137498.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77021903_CACA/- chr18:77021903-77021906 - ENSMUSG00000025420.13 ENSMUST00000154665.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77329113_TCTC/- chr18:77329113-77329116 - ENSMUSG00000032818.15 ENSMUST00000035501.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77329113_TCTC/- chr18:77329113-77329116 - ENSMUSG00000032818.15 ENSMUST00000096547.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77329113_TCTC/- chr18:77329113-77329116 - ENSMUSG00000032818.15 ENSMUST00000148341.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3278;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77505404_AA/- chr18:77505404-77505405 - ENSMUSG00000025427.14 ENSMUST00000026494.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77505404_AA/- chr18:77505404-77505405 - ENSMUSG00000025427.14 ENSMUST00000182024.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77505404_AA/- chr18:77505404-77505405 - ENSMUSG00000025427.14 ENSMUST00000182153.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77505404_AA/- chr18:77505404-77505405 - ENSMUSG00000025427.14 ENSMUST00000182348.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=287;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77848869_G/T/GT chr18:77848869 T ENSMUSG00000025429.8 ENSMUST00000114741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77848869_G/T/GT chr18:77848869 GT ENSMUSG00000025429.8 ENSMUST00000114741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77859701_GTATATGTGTACATGCCATGGTGTACATGGCATGTACACATATACATGGA/- chr18:77859701-77859750 - ENSMUSG00000025429.8 ENSMUST00000114741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_77878887_TT/- chr18:77878887-77878888 - ENSMUSG00000025429.8 ENSMUST00000114741.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_78243693_AA/- chr18:78243693-78243694 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_78348892_AA/-/AAA chr18:78348892-78348893 - ENSMUSG00000090451.1 ENSMUST00000164064.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=861;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_78348892_AA/-/AAA chr18:78348892-78348893 AAA ENSMUSG00000090451.1 ENSMUST00000164064.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=861;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_79764542_TTATTA/-/TTA chr18:79764542-79764547 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_79764542_TTATTA/-/TTA chr18:79764542-79764547 TTA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_79892412_-/A chr18:79892411-79892412 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_80160812_TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGTTTGTGCCTATATGAGTGTAAGGGGGGTTGTGTCTCTGTGTGTGTGTG/-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGTTTGTGCCTATATGAGTGTAAGGGGGGTTGTGTCTCTGTGTGTGTGTG chr18:80160812-80160894 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_80160812_TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGTTTGTGCCTATATGAGTGTAAGGGGGGTTGTGTCTCTGTGTGTGTGTG/-/TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGTTTGTGCCTATATGAGTGTAAGGGGGGTTGTGTCTCTGTGTGTGTGTG chr18:80160812-80160894 TGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGGTTTGTGCCTATATGAGTGTAAGGGGGGTTGTGTCTCTGTGTGTGTGTG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_80160939_G/T chr18:80160939 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_80175350_TCTTCT/- chr18:80175350-80175355 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_80441364_ACAC/-/AC chr18:80441364-80441367 - ENSMUSG00000033323.13 ENSMUST00000036229.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80441364_ACAC/-/AC chr18:80441364-80441367 AC ENSMUSG00000033323.13 ENSMUST00000036229.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80441364_ACAC/-/AC chr18:80441364-80441367 - ENSMUSG00000033323.13 ENSMUST00000160434.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=576;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80441364_ACAC/-/AC chr18:80441364-80441367 AC ENSMUSG00000033323.13 ENSMUST00000160434.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=576;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80441364_ACAC/-/AC chr18:80441364-80441367 - ENSMUSG00000033323.13 ENSMUST00000161003.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=505;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80441364_ACAC/-/AC chr18:80441364-80441367 AC ENSMUSG00000033323.13 ENSMUST00000161003.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=505;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80631988_GTGT/-/GTGTGT chr18:80631988-80631991 - ENSMUSG00000033016.15 ENSMUST00000078049.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80631988_GTGT/-/GTGTGT chr18:80631988-80631991 GTGTGT ENSMUSG00000033016.15 ENSMUST00000078049.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80631988_GTGT/-/GTGTGT chr18:80631988-80631991 - ENSMUSG00000033016.15 ENSMUST00000167977.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80631988_GTGT/-/GTGTGT chr18:80631988-80631991 GTGTGT ENSMUSG00000033016.15 ENSMUST00000167977.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80631988_GTGT/-/GTGTGT chr18:80631988-80631991 - ENSMUSG00000033016.15 ENSMUST00000170905.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80631988_GTGT/-/GTGTGT chr18:80631988-80631991 GTGTGT ENSMUSG00000033016.15 ENSMUST00000170905.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_80720365_G/T chr18:80720365 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_81857769_C/T chr18:81857769 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_81876917_TTTTT/- chr18:81876917-81876921 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_82161409_T/A chr18:82161409 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_82161412_G/A chr18:82161412 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_82221344_A/G chr18:82221344 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_82285514_AGAG/-/AG chr18:82285514-82285517 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_82285514_AGAG/-/AG chr18:82285514-82285517 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_82419270_GGG/- chr18:82419270-82419272 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_82703605_T/A chr18:82703605 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_83067856_G/C chr18:83067856 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_83258613_C/A chr18:83258613 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_83482971_ACAC/-/AC chr18:83482971-83482974 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_83482971_ACAC/-/AC chr18:83482971-83482974 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_83567469_TT/- chr18:83567469-83567470 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_83990973_TCTC/- chr18:83990973-83990976 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 - ENSMUSG00000024646.13 ENSMUST00000025549.13 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 TCTC ENSMUSG00000024646.13 ENSMUST00000025549.13 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 - ENSMUSG00000024646.13 ENSMUST00000159846.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 TCTC ENSMUSG00000024646.13 ENSMUST00000159846.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 - ENSMUSG00000024646.13 ENSMUST00000160180.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 TCTC ENSMUSG00000024646.13 ENSMUST00000160180.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 - ENSMUSG00000024646.13 ENSMUST00000163083.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_84870942_TCTCTC/-/TCTC chr18:84870942-84870947 TCTC ENSMUSG00000024646.13 ENSMUST00000163083.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr18_85255512_TGTG/-/TG chr18:85255512-85255515 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_85255512_TGTG/-/TG chr18:85255512-85255515 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_85486236_TT/-/T chr18:85486236-85486237 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_85486236_TT/-/T chr18:85486236-85486237 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_85497495_T/A chr18:85497495 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_85662674_TT/-/T chr18:85662674-85662675 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_85662674_TT/-/T chr18:85662674-85662675 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_87374996_ACAC/- chr18:87374996-87374999 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_88935089_-/TTTTTTTTTTTTTTTTTTTTTTTT chr18:88935088-88935089 TTTTTTTTTTTTTTTTTTTTTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_89911864_T/A chr18:89911864 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_89911974_C/T chr18:89911974 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_90091522_T/C chr18:90091522 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr18_90091560_T/G chr18:90091560 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_3114563_C/T chr19:3114563 T ENSMUSG00000100969.6 ENSMUST00000190575.6 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_3217993_C/T chr19:3217993 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_3553181_AAA/- chr19:3553181-3553183 - ENSMUSG00000024908.15 ENSMUST00000025846.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_3553181_AAA/- chr19:3553181-3553183 - ENSMUSG00000024908.15 ENSMUST00000113997.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_3553181_AAA/- chr19:3553181-3553183 - ENSMUSG00000024908.15 ENSMUST00000172362.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_3553181_AAA/- chr19:3553181-3553183 - ENSMUSG00000024908.15 ENSMUST00000223919.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_3553181_AAA/- chr19:3553181-3553183 - ENSMUSG00000024908.15 ENSMUST00000225446.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_3553181_AAA/- chr19:3553181-3553183 - ENSMUSG00000024908.15 ENSMUST00000226109.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_4211279_AAAAA/- chr19:4211279-4211283 - ENSMUSG00000040663.8 ENSMUST00000046506.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2955;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_4211279_AAAAA/- chr19:4211279-4211283 - ENSMUSG00000040663.8 ENSMUST00000126457.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3311;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_4211279_AAAAA/- chr19:4211279-4211283 - ENSMUSG00000040663.8 ENSMUST00000132305.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2981;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_4211279_AAAAA/- chr19:4211279-4211283 - ENSMUSG00000040663.8 ENSMUST00000138090.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3022;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_4211279_AAAAA/- chr19:4211279-4211283 - ENSMUSG00000093346.1 ENSMUST00000175605.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4119;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_4868216_TGTGTG/- chr19:4868216-4868221 - ENSMUSG00000006457.3 ENSMUST00000006626.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_4868216_TGTGTG/- chr19:4868216-4868221 - ENSMUSG00000006457.3 ENSMUST00000138811.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4658;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_5957102_GG/- chr19:5957102-5957103 - ENSMUSG00000024833.14 ENSMUST00000025752.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_5957102_GG/- chr19:5957102-5957103 - ENSMUSG00000024833.14 ENSMUST00000165143.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_5968426_TTTT/- chr19:5968426-5968429 - ENSMUSG00000024833.14 ENSMUST00000025752.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_5968426_TTTT/- chr19:5968426-5968429 - ENSMUSG00000037451.7 ENSMUST00000041827.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1805;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_5968426_TTTT/- chr19:5968426-5968429 - ENSMUSG00000024833.14 ENSMUST00000165143.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4220;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6007958_AA/- chr19:6007958-6007959 - ENSMUSG00000024942.16 ENSMUST00000025891.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6007958_AA/- chr19:6007958-6007959 - ENSMUSG00000024942.16 ENSMUST00000164843.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6007958_AA/- chr19:6007958-6007959 - ENSMUSG00000097404.1 ENSMUST00000180505.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4661;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6245008_-/CCTT chr19:6245007-6245008 CCTT ENSMUSG00000024773.14 ENSMUST00000045351.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6245008_-/CCTT chr19:6245007-6245008 CCTT ENSMUSG00000024773.14 ENSMUST00000145600.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=457;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000077182.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000113461.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000113462.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000124815.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000128272.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000137166.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000137821.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000150792.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000155158.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_6466751_AA/- chr19:6466751-6466752 - ENSMUSG00000033768.16 ENSMUST00000157014.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_8300399_ATATAT/-/ATAT chr19:8300399-8300404 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_8300399_ATATAT/-/ATAT chr19:8300399-8300404 ATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_8567936_A/T chr19:8567936 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_8797056_G/A chr19:8797056 A ENSMUSG00000071662.3 ENSMUST00000096261.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_8900532_CCTCCCTCCCTC/- chr19:8900532-8900543 - ENSMUSG00000071650.5 ENSMUST00000096246.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_8900532_CCTCCCTCCCTC/- chr19:8900532-8900543 - ENSMUSG00000071652.7 ENSMUST00000096249.5 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2642;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_8905422_-/CTCT chr19:8905421-8905422 CTCT ENSMUSG00000071650.5 ENSMUST00000096246.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_9970059_CACA/- chr19:9970059-9970062 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_9988591_TA/T/AA chr19:9988591-9988592 T ENSMUSG00000024661.6 ENSMUST00000025563.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3499;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_9988591_TA/T/AA chr19:9988591-9988592 AA ENSMUSG00000024661.6 ENSMUST00000025563.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3499;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_9988591_TA/T/AA chr19:9988591-9988592 T ENSMUSG00000037418.5 ENSMUST00000117346.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_9988591_TA/T/AA chr19:9988591-9988592 AA ENSMUSG00000037418.5 ENSMUST00000117346.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_9988591_TA/T/AA chr19:9988591-9988592 T ENSMUSG00000037418.5 ENSMUST00000144273.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1956;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_9988591_TA/T/AA chr19:9988591-9988592 AA ENSMUSG00000037418.5 ENSMUST00000144273.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1956;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10347683_A/C chr19:10347683 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_10906249_GG/-/G chr19:10906249-10906250 - ENSMUSG00000024735.13 ENSMUST00000025642.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=717;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10906249_GG/-/G chr19:10906249-10906250 G ENSMUSG00000024735.13 ENSMUST00000025642.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=717;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10906249_GG/-/G chr19:10906249-10906250 - ENSMUSG00000024735.13 ENSMUST00000178868.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=743;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10906249_GG/-/G chr19:10906249-10906250 G ENSMUSG00000024735.13 ENSMUST00000178868.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=743;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10906249_GG/-/G chr19:10906249-10906250 - ENSMUSG00000024735.13 ENSMUST00000179297.2 Transcript 3_prime_UTR_variant 2725-2726 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10906249_GG/-/G chr19:10906249-10906250 G ENSMUSG00000024735.13 ENSMUST00000179297.2 Transcript 3_prime_UTR_variant 2725-2726 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10906249_GG/-/G chr19:10906249-10906250 - ENSMUSG00000024735.13 ENSMUST00000191092.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3489;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_10906249_GG/-/G chr19:10906249-10906250 G ENSMUSG00000024735.13 ENSMUST00000191092.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3489;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_12067703_G/A chr19:12067703 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_12970500_-/TATTT chr19:12970499-12970500 TATTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_13178520_T/- chr19:13178520 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_13245566_T/C chr19:13245566 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_14345140_TGTG/- chr19:14345140-14345143 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_14658270_CTCTT/- chr19:14658270-14658274 - ENSMUSG00000103488.1 ENSMUST00000193515.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=393;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_14791935_A/G chr19:14791935 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_14792151_A/G chr19:14792151 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_17825769_TATA/- chr19:17825769-17825772 - ENSMUSG00000024713.15 ENSMUST00000025618.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_17825769_TATA/- chr19:17825769-17825772 - ENSMUSG00000024713.15 ENSMUST00000050715.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_18082027_GTGTGT/- chr19:18082027-18082032 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_19444655_C/T chr19:19444655 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_19851179_AA/-/AAA chr19:19851179-19851180 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_19851179_AA/-/AAA chr19:19851179-19851180 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_20816526_ATATATATATATATATATATATATAT/- chr19:20816526-20816551 - ENSMUSG00000024749.8 ENSMUST00000039500.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21156804_TTCT/- chr19:21156804-21156807 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_21254332_CTCT/- chr19:21254332-21254335 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_21278155_TT/-/T chr19:21278155-21278156 - ENSMUSG00000024750.10 ENSMUST00000025659.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 T ENSMUSG00000024750.10 ENSMUST00000025659.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 - ENSMUSG00000024750.10 ENSMUST00000133175.1 Transcript non_coding_transcript_exon_variant 2116-2117 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 T ENSMUSG00000024750.10 ENSMUST00000133175.1 Transcript non_coding_transcript_exon_variant 2116-2117 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 - ENSMUSG00000024750.10 ENSMUST00000141568.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 T ENSMUSG00000024750.10 ENSMUST00000141568.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 - ENSMUSG00000024750.10 ENSMUST00000149144.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 T ENSMUSG00000024750.10 ENSMUST00000149144.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 - ENSMUSG00000024750.10 ENSMUST00000152338.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1117;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21278155_TT/-/T chr19:21278155-21278156 T ENSMUSG00000024750.10 ENSMUST00000152338.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1117;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21573672_AAAA/- chr19:21573672-21573675 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_21825275_AA/- chr19:21825275-21825276 - ENSMUSG00000024754.12 ENSMUST00000025663.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_21825275_AA/- chr19:21825275-21825276 - ENSMUSG00000024754.12 ENSMUST00000096194.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 - ENSMUSG00000052387.15 ENSMUST00000074770.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 TG ENSMUSG00000052387.15 ENSMUST00000074770.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 - ENSMUSG00000052387.15 ENSMUST00000087576.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 TG ENSMUSG00000052387.15 ENSMUST00000087576.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 - ENSMUSG00000052387.15 ENSMUST00000099569.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 TG ENSMUSG00000052387.15 ENSMUST00000099569.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 - ENSMUSG00000088558.1 ENSMUST00000157933.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1730;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22237348_TGTG/-/TG chr19:22237348-22237351 TG ENSMUSG00000088558.1 ENSMUST00000157933.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1730;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22577694_-/CTAT chr19:22577693-22577694 CTAT ENSMUSG00000052387.15 ENSMUST00000037901.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22577694_-/CTAT chr19:22577693-22577694 CTAT ENSMUSG00000052387.15 ENSMUST00000074770.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22577694_-/CTAT chr19:22577693-22577694 CTAT ENSMUSG00000052387.15 ENSMUST00000087576.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_22577694_-/CTAT chr19:22577693-22577694 CTAT ENSMUSG00000052387.15 ENSMUST00000099569.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_23633140_AA/-/AAA chr19:23633140-23633141 - ENSMUSG00000033053.3 ENSMUST00000035849.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_23633140_AA/-/AAA chr19:23633140-23633141 AAA ENSMUSG00000033053.3 ENSMUST00000035849.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_23875419_G/A chr19:23875419 A ENSMUSG00000024897.8 ENSMUST00000025830.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_24565266_GAGA/-/GA chr19:24565266-24565269 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_24565266_GAGA/-/GA chr19:24565266-24565269 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_24966341_TT/-/T chr19:24966341-24966342 - ENSMUSG00000024878.8 ENSMUST00000025815.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4725;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_24966341_TT/-/T chr19:24966341-24966342 T ENSMUSG00000024878.8 ENSMUST00000025815.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4725;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_25081863_TAC/T/CAC chr19:25081863-25081865 T ENSMUSG00000052085.6 ENSMUST00000025831.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_25081863_TAC/T/CAC chr19:25081863-25081865 CAC ENSMUSG00000052085.6 ENSMUST00000025831.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_25142873_GG/- chr19:25142873-25142874 - ENSMUSG00000052085.6 ENSMUST00000025831.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_26136201_CTCT/- chr19:26136201-26136204 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_26178033_GG/AA chr19:26178033-26178034 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_26897536_A/T chr19:26897536 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_27314951_TGTG/- chr19:27314951-27314954 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_27613568_TGTG/- chr19:27613568-27613571 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_27652246_AA/- chr19:27652246-27652247 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_28257068_TTT/- chr19:28257068-28257070 - ENSMUSG00000052942.13 ENSMUST00000162022.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1781;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_29671561_A/T chr19:29671561 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_30490451_AGGAGG/- chr19:30490451-30490456 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_31430969_T/G chr19:31430969 G ENSMUSG00000052920.14 ENSMUST00000065067.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_31430969_T/G chr19:31430969 G ENSMUSG00000052920.14 ENSMUST00000073581.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_31968788_GTGT/-/GT chr19:31968788-31968791 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_31968788_GTGT/-/GT chr19:31968788-31968791 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_32695115_TT/- chr19:32695115-32695116 - ENSMUSG00000013662.5 ENSMUST00000070210.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_33235828_ACAC/-/AC chr19:33235828-33235831 - ENSMUSG00000071573.13 ENSMUST00000096114.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_33235828_ACAC/-/AC chr19:33235828-33235831 AC ENSMUSG00000071573.13 ENSMUST00000096114.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_33235828_ACAC/-/AC chr19:33235828-33235831 - ENSMUSG00000071573.13 ENSMUST00000163093.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_33235828_ACAC/-/AC chr19:33235828-33235831 AC ENSMUSG00000071573.13 ENSMUST00000163093.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_34071563_GTGTGT/- chr19:34071563-34071568 - ENSMUSG00000024770.14 ENSMUST00000025682.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_34071563_GTGTGT/- chr19:34071563-34071568 - ENSMUSG00000080678.1 ENSMUST00000117028.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2509;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_34071563_GTGTGT/- chr19:34071563-34071568 - ENSMUSG00000024770.14 ENSMUST00000126710.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_34071563_GTGTGT/- chr19:34071563-34071568 - ENSMUSG00000024770.14 ENSMUST00000148821.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_35055817_CAAAAA/C/AAAAAA chr19:35055817-35055822 C ENSMUSG00000101966.1 ENSMUST00000186108.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_35055817_CAAAAA/C/AAAAAA chr19:35055817-35055822 AAAAAA ENSMUSG00000101966.1 ENSMUST00000186108.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=570;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_35061748_AA/-/AAAA chr19:35061748-35061749 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_35061748_AA/-/AAAA chr19:35061748-35061749 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_35117552_ACACAC/-/AC chr19:35117552-35117557 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_35117552_ACACAC/-/AC chr19:35117552-35117557 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_36014159_T/G chr19:36014159 G ENSMUSG00000024798.15 ENSMUST00000099505.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_36014159_T/G chr19:36014159 G ENSMUSG00000024798.15 ENSMUST00000164639.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_36014159_T/G chr19:36014159 G ENSMUSG00000024798.15 ENSMUST00000164781.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_36014159_T/G chr19:36014159 G ENSMUSG00000024798.15 ENSMUST00000165215.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_36014159_T/G chr19:36014159 G ENSMUSG00000024798.15 ENSMUST00000166074.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_36014159_T/G chr19:36014159 G ENSMUSG00000024798.15 ENSMUST00000170360.1 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37022112_G/- chr19:37022112 - ENSMUSG00000039652.16 ENSMUST00000079754.10 Transcript 3_prime_UTR_variant 5078 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37022112_G/- chr19:37022112 - ENSMUSG00000039652.16 ENSMUST00000123727.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2527;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37022112_G/- chr19:37022112 - ENSMUSG00000039652.16 ENSMUST00000124158.7 Transcript 3_prime_UTR_variant 3996 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37022112_G/- chr19:37022112 - ENSMUSG00000039652.16 ENSMUST00000126188.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=858;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37022112_G/- chr19:37022112 - ENSMUSG00000039652.16 ENSMUST00000132580.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1823;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37022112_G/- chr19:37022112 - ENSMUSG00000039652.16 ENSMUST00000136286.7 Transcript 3_prime_UTR_variant 5027 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37022112_G/- chr19:37022112 - ENSMUSG00000039652.16 ENSMUST00000154376.7 Transcript 3_prime_UTR_variant 5438 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37023711_CC/- chr19:37023711-37023712 - ENSMUSG00000039652.16 ENSMUST00000079754.10 Transcript 3_prime_UTR_variant 3478-3479 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37023711_CC/- chr19:37023711-37023712 - ENSMUSG00000039652.16 ENSMUST00000123727.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=927;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37023711_CC/- chr19:37023711-37023712 - ENSMUSG00000039652.16 ENSMUST00000124158.7 Transcript 3_prime_UTR_variant 2396-2397 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37023711_CC/- chr19:37023711-37023712 - ENSMUSG00000039652.16 ENSMUST00000126188.7 Transcript 3_prime_UTR_variant 3482-3483 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37023711_CC/- chr19:37023711-37023712 - ENSMUSG00000039652.16 ENSMUST00000132580.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=223;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37023711_CC/- chr19:37023711-37023712 - ENSMUSG00000039652.16 ENSMUST00000136286.7 Transcript 3_prime_UTR_variant 3427-3428 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37023711_CC/- chr19:37023711-37023712 - ENSMUSG00000039652.16 ENSMUST00000154376.7 Transcript 3_prime_UTR_variant 3838-3839 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000079754.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000123727.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000126188.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000126781.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000128642.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4479;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000131917.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000132580.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000133988.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1678;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000136286.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000142973.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3639;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000039652.16 ENSMUST00000154376.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3632;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000092994.1 ENSMUST00000175253.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=404;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37179695_ACAC/- chr19:37179695-37179698 - ENSMUSG00000097591.1 ENSMUST00000180609.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37732972_ACAC/- chr19:37732972-37732975 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_37952819_A/G chr19:37952819 G ENSMUSG00000048612.16 ENSMUST00000041475.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37952819_A/G chr19:37952819 G ENSMUSG00000048612.16 ENSMUST00000172095.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37952819_A/G chr19:37952819 G ENSMUSG00000048612.16 ENSMUST00000223650.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37952819_A/G chr19:37952819 G ENSMUSG00000048612.16 ENSMUST00000225159.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_37952819_A/G chr19:37952819 G ENSMUSG00000048612.16 ENSMUST00000226068.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38095290_AA/-/AAA chr19:38095290-38095291 - ENSMUSG00000054200.6 ENSMUST00000067098.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1788;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38095290_AA/-/AAA chr19:38095290-38095291 AAA ENSMUSG00000054200.6 ENSMUST00000067098.6 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1788;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38318054_CTTCTT/- chr19:38318054-38318059 - ENSMUSG00000105709.1 ENSMUST00000199966.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2799;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38318054_CTTCTT/- chr19:38318054-38318059 - ENSMUSG00000105709.1 ENSMUST00000200561.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2784;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38508350_GGG/-/GG chr19:38508350-38508352 - ENSMUSG00000024998.17 ENSMUST00000181994.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38508350_GGG/-/GG chr19:38508350-38508352 GG ENSMUSG00000024998.17 ENSMUST00000181994.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38508350_GGG/-/GG chr19:38508350-38508352 - ENSMUSG00000024998.17 ENSMUST00000182481.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38508350_GGG/-/GG chr19:38508350-38508352 GG ENSMUSG00000024998.17 ENSMUST00000182481.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38690771_AA/-/A chr19:38690771-38690772 - ENSMUSG00000024998.17 ENSMUST00000169713.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38690771_AA/-/A chr19:38690771-38690772 A ENSMUSG00000024998.17 ENSMUST00000169713.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38690771_AA/-/A chr19:38690771-38690772 - ENSMUSG00000024998.17 ENSMUST00000182267.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38690771_AA/-/A chr19:38690771-38690772 A ENSMUSG00000024998.17 ENSMUST00000182267.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38690771_AA/-/A chr19:38690771-38690772 - ENSMUSG00000024998.17 ENSMUST00000182481.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_38690771_AA/-/A chr19:38690771-38690772 A ENSMUSG00000024998.17 ENSMUST00000182481.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_39249084_T/G chr19:39249084 G ENSMUSG00000093610.7 ENSMUST00000175960.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_39249084_T/G chr19:39249084 G ENSMUSG00000093610.7 ENSMUST00000176493.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_39249093_C/T chr19:39249093 T ENSMUSG00000093610.7 ENSMUST00000175960.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_39249093_C/T chr19:39249093 T ENSMUSG00000093610.7 ENSMUST00000176493.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_39448558_A/G chr19:39448558 G ENSMUSG00000032808.2 ENSMUST00000035488.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_39745604_-/AAAAAAAAAA chr19:39745603-39745604 AAAAAAAAAA ENSMUSG00000074882.3 ENSMUST00000099472.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4549;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000223724.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000223724.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000224227.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000224227.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000224233.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000224233.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000224247.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000224247.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000224646.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000224646.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000224667.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000224667.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000225148.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000225148.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000225153.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000225153.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000225786.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000225786.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 - ENSMUSG00000025006.16 ENSMUST00000226047.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40418696_TT/-/TTT chr19:40418696-40418697 TTT ENSMUSG00000025006.16 ENSMUST00000226047.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40493822_TCTCTCTC/- chr19:40493822-40493829 - ENSMUSG00000025006.16 ENSMUST00000224227.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40493822_TCTCTCTC/- chr19:40493822-40493829 - ENSMUSG00000025006.16 ENSMUST00000224247.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40493822_TCTCTCTC/- chr19:40493822-40493829 - ENSMUSG00000025006.16 ENSMUST00000224646.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40493822_TCTCTCTC/- chr19:40493822-40493829 - ENSMUSG00000025006.16 ENSMUST00000224667.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40493822_TCTCTCTC/- chr19:40493822-40493829 - ENSMUSG00000025006.16 ENSMUST00000225148.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40493822_TCTCTCTC/- chr19:40493822-40493829 - ENSMUSG00000025006.16 ENSMUST00000225153.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40493822_TCTCTCTC/- chr19:40493822-40493829 - ENSMUSG00000025006.16 ENSMUST00000226047.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_40649444_-/TTTC chr19:40649443-40649444 TTTC ENSMUSG00000048120.16 ENSMUST00000134063.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_42240899_T/G chr19:42240899 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_42701496_-/GA chr19:42701495-42701496 GA ENSMUSG00000077768.1 ENSMUST00000104580.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1593;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43064897_ACAC/- chr19:43064897-43064900 - ENSMUSG00000074852.3 ENSMUST00000099428.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43287103_A/C chr19:43287103 C ENSMUSG00000074852.3 ENSMUST00000099428.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43400065_GTGT/- chr19:43400065-43400068 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_43495749_A/- chr19:43495749 - ENSMUSG00000025190.13 ENSMUST00000026196.13 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4003;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43495749_A/- chr19:43495749 - ENSMUSG00000025190.13 ENSMUST00000132504.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4566;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43495749_A/- chr19:43495749 - ENSMUSG00000025190.13 ENSMUST00000133325.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4272;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43495749_A/- chr19:43495749 - ENSMUSG00000025189.9 ENSMUST00000165311.2 Transcript 3_prime_UTR_variant 3576 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43495749_A/- chr19:43495749 - ENSMUSG00000025189.9 ENSMUST00000223787.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=708;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_43495749_A/- chr19:43495749 - ENSMUSG00000025189.9 ENSMUST00000225191.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=769;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_44344207_AA/- chr19:44344207-44344208 - ENSMUSG00000050195.8 ENSMUST00000058856.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_44499089_GTGT/- chr19:44499089-44499092 - ENSMUSG00000036961.4 ENSMUST00000041163.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_44758077_A/C chr19:44758077 C ENSMUSG00000004231.15 ENSMUST00000004340.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_44758077_A/C chr19:44758077 C ENSMUSG00000004231.15 ENSMUST00000173346.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1838;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_44758077_A/C chr19:44758077 C ENSMUSG00000004231.15 ENSMUST00000174490.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 - ENSMUSG00000025212.16 ENSMUST00000062213.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 GTGT ENSMUSG00000025212.16 ENSMUST00000062213.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 - ENSMUSG00000025212.16 ENSMUST00000084493.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 GTGT ENSMUSG00000025212.16 ENSMUST00000084493.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 - ENSMUSG00000025212.16 ENSMUST00000111954.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 GTGT ENSMUSG00000025212.16 ENSMUST00000111954.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 - ENSMUSG00000074818.12 ENSMUST00000145391.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 GTGT ENSMUSG00000074818.12 ENSMUST00000145391.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1485;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 - ENSMUSG00000074818.12 ENSMUST00000169459.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2327;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45048099_GTGTGT/-/GTGT chr19:45048099-45048104 GTGT ENSMUSG00000074818.12 ENSMUST00000169459.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2327;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_45725406_CAA/C/AAA chr19:45725406-45725408 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_45725406_CAA/C/AAA chr19:45725406-45725408 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_45832999_CT/- chr19:45832999-45833000 - ENSMUSG00000039901.9 ENSMUST00000045396.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46533017_GG/-/G chr19:46533017-46533018 - ENSMUSG00000025035.8 ENSMUST00000026009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46533017_GG/-/G chr19:46533017-46533018 G ENSMUSG00000025035.8 ENSMUST00000026009.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46859209_GTGT/- chr19:46859209-46859212 - ENSMUSG00000064105.12 ENSMUST00000077666.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46859209_GTGT/- chr19:46859209-46859212 - ENSMUSG00000064105.12 ENSMUST00000099373.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46915528_AA/-/AAA chr19:46915528-46915529 - ENSMUSG00000025041.16 ENSMUST00000086961.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46915528_AA/-/AAA chr19:46915528-46915529 AAA ENSMUSG00000025041.16 ENSMUST00000086961.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46915528_AA/-/AAA chr19:46915528-46915529 - ENSMUSG00000025041.16 ENSMUST00000168536.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46915528_AA/-/AAA chr19:46915528-46915529 AAA ENSMUSG00000025041.16 ENSMUST00000168536.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46915528_AA/-/AAA chr19:46915528-46915529 - ENSMUSG00000025041.16 ENSMUST00000172239.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_46915528_AA/-/AAA chr19:46915528-46915529 AAA ENSMUSG00000025041.16 ENSMUST00000172239.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47062088_TGTG/-/TG chr19:47062088-47062091 - ENSMUSG00000094400.1 ENSMUST00000082487.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3820;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47062088_TGTG/-/TG chr19:47062088-47062091 TG ENSMUSG00000094400.1 ENSMUST00000082487.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3820;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47426236_AA/- chr19:47426236-47426237 - ENSMUSG00000053617.11 ENSMUST00000081619.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47426236_AA/- chr19:47426236-47426237 - ENSMUSG00000053617.11 ENSMUST00000111800.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47452247_TCTCT/- chr19:47452247-47452251 - ENSMUSG00000053617.11 ENSMUST00000081619.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47452247_TCTCT/- chr19:47452247-47452251 - ENSMUSG00000053617.11 ENSMUST00000111800.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47452255_T/C chr19:47452255 C ENSMUSG00000053617.11 ENSMUST00000081619.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47452255_T/C chr19:47452255 C ENSMUSG00000053617.11 ENSMUST00000111800.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47792807_CACA/- chr19:47792807-47792810 - ENSMUSG00000044948.16 ENSMUST00000026048.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47792807_CACA/- chr19:47792807-47792810 - ENSMUSG00000044948.16 ENSMUST00000160247.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47792807_CACA/- chr19:47792807-47792810 - ENSMUSG00000044948.16 ENSMUST00000160970.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2041;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47879608_GTGT/- chr19:47879608-47879611 - ENSMUSG00000044948.16 ENSMUST00000026048.9 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47879608_GTGT/- chr19:47879608-47879611 - ENSMUSG00000025069.14 ENSMUST00000056159.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47879608_GTGT/- chr19:47879608-47879611 - ENSMUSG00000025069.14 ENSMUST00000120645.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_47879608_GTGT/- chr19:47879608-47879611 - ENSMUSG00000025069.14 ENSMUST00000135016.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_48225255_TG/- chr19:48225255-48225256 - ENSMUSG00000063434.5 ENSMUST00000078880.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_48402310_-/TTCTTCTTCTTCTTCTTC chr19:48402309-48402310 TTCTTCTTCTTCTTCTTC ENSMUSG00000063434.5 ENSMUST00000078880.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_48420142_G/T chr19:48420142 T ENSMUSG00000063434.5 ENSMUST00000078880.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_48948388_G/T chr19:48948388 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_49391490_T/C chr19:49391490 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_49523395_A/G chr19:49523395 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_49523401_G/A chr19:49523401 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_49793455_TATATA/- chr19:49793455-49793460 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_49830393_TATA/- chr19:49830393-49830396 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_50005228_CA/- chr19:50005228-50005229 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_50481084_TCTCTCCTCTCCCTCCCTCTCCCTCCCTCT/- chr19:50481084-50481113 - ENSMUSG00000043531.16 ENSMUST00000072685.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_50481084_TCTCTCCTCTCCCTCCCTCTCCCTCCCTCT/- chr19:50481084-50481113 - ENSMUSG00000043531.16 ENSMUST00000111756.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_50481084_TCTCTCCTCTCCCTCCCTCTCCCTCCCTCT/- chr19:50481084-50481113 - ENSMUSG00000043531.16 ENSMUST00000164039.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_50481084_TCTCTCCTCTCCCTCCCTCTCCCTCCCTCT/- chr19:50481084-50481113 - ENSMUSG00000043531.16 ENSMUST00000209413.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_50481084_TCTCTCCTCTCCCTCCCTCTCCCTCCCTCT/- chr19:50481084-50481113 - ENSMUSG00000043531.16 ENSMUST00000209783.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_50481084_TCTCTCCTCTCCCTCCCTCTCCCTCCCTCT/- chr19:50481084-50481113 - ENSMUSG00000043531.16 ENSMUST00000211008.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_50481084_TCTCTCCTCTCCCTCCCTCTCCCTCCCTCT/- chr19:50481084-50481113 - ENSMUSG00000043531.16 ENSMUST00000211687.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_50838745_C/A chr19:50838745 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_51246644_CTCT/- chr19:51246644-51246647 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_51508531_CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC/- chr19:51508531-51508575 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_51702072_TCTCTC/- chr19:51702072-51702077 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_53273808_AAAAA/- chr19:53273808-53273812 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_53514069_GTGTGT/- chr19:53514069-53514074 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_54990062_ACACAC/- chr19:54990062-54990067 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_55533027_GTGT/- chr19:55533027-55533030 - ENSMUSG00000024983.10 ENSMUST00000095950.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_55533027_GTGT/- chr19:55533027-55533030 - ENSMUSG00000024983.10 ENSMUST00000223690.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_55533027_GTGT/- chr19:55533027-55533030 - ENSMUSG00000024983.10 ENSMUST00000225529.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_55722775_A/C chr19:55722775 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_55722777_T/C chr19:55722777 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_57603041_-/TATC chr19:57603040-57603041 TATC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_57628663_A/C chr19:57628663 C ENSMUSG00000054843.8 ENSMUST00000077282.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_57711913_GTGTGT/- chr19:57711913-57711918 - ENSMUSG00000054843.8 ENSMUST00000077282.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_57836178_-/T chr19:57836177-57836178 T ENSMUSG00000054843.8 ENSMUST00000077282.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_57836179_-/TCTCT chr19:57836178-57836179 TCTCT ENSMUSG00000054843.8 ENSMUST00000077282.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_58683512_-/CCTT chr19:58683511-58683512 CCTT ENSMUSG00000046008.7 ENSMUST00000057270.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1725;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_59179410_ACAC/- chr19:59179410-59179413 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_59486812_C/G chr19:59486812 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_59676842_ACAC/- chr19:59676842-59676845 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_60035719_C/T chr19:60035719 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_60575811_AAAA/- chr19:60575811-60575814 - ENSMUSG00000033417.15 ENSMUST00000081790.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_60575811_AAAA/- chr19:60575811-60575814 - ENSMUSG00000033417.15 ENSMUST00000111460.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_60575811_AAAA/- chr19:60575811-60575814 - ENSMUSG00000033417.15 ENSMUST00000166712.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_60575811_AAAA/- chr19:60575811-60575814 - ENSMUSG00000092655.1 ENSMUST00000174914.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4715;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_60713117_-/AC chr19:60713116-60713117 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chr19_61006689_A/T chr19:61006689 T ENSMUSG00000003228.8 ENSMUST00000003313.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61099293_T/C chr19:61099293 C ENSMUSG00000074733.14 ENSMUST00000122927.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61113317_GAAA/- chr19:61113317-61113320 - ENSMUSG00000074733.14 ENSMUST00000122927.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61113317_GAAA/- chr19:61113317-61113320 - ENSMUSG00000074733.14 ENSMUST00000127117.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3823;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61113317_GAAA/- chr19:61113317-61113320 - ENSMUSG00000074733.14 ENSMUST00000127290.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1664;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61113317_GAAA/- chr19:61113317-61113320 - ENSMUSG00000074733.14 ENSMUST00000180544.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4811;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61113317_GAAA/- chr19:61113317-61113320 - ENSMUSG00000074733.14 ENSMUST00000181469.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3213;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61113317_GAAA/- chr19:61113317-61113320 - ENSMUSG00000074733.14 ENSMUST00000205712.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3954;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chr19_61113317_GAAA/- chr19:61113317-61113320 - ENSMUSG00000074733.14 ENSMUST00000205854.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3804;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_3081239_C/G chrX:3081239 G ENSMUSG00000100249.1 ENSMUST00000189190.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2422;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_3081534_T/A chrX:3081534 A ENSMUSG00000100249.1 ENSMUST00000189190.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2717;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_3198648_G/T chrX:3198648 T ENSMUSG00000096426.2 ENSMUST00000178080.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2821;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_3222745_T/G chrX:3222745 G ENSMUSG00000084298.1 ENSMUST00000120396.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2855;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_3231430_A/C chrX:3231430 C ENSMUSG00000084298.1 ENSMUST00000120396.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1066;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_3231430_A/C chrX:3231430 C ENSMUSG00000095907.2 ENSMUST00000130484.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=265;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_3295790_T/C chrX:3295790 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3296080_C/T chrX:3296080 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3296087_T/A chrX:3296087 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3360515_A/G chrX:3360515 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3370873_G/A chrX:3370873 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3370882_T/A chrX:3370882 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3851074_G/T chrX:3851074 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3865533_A/G chrX:3865533 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_3865658_A/G chrX:3865658 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4096920_AT/GG chrX:4096920-4096921 GG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4418466_A/T chrX:4418466 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4477347_C/T chrX:4477347 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4477349_G/T chrX:4477349 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4512661_C/T chrX:4512661 T ENSMUSG00000078214.5 ENSMUST00000105016.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3013;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_4512661_C/T chrX:4512661 T ENSMUSG00000094323.1 ENSMUST00000177793.1 Transcript non_coding_transcript_exon_variant 815 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_4519785_A/G chrX:4519785 G ENSMUSG00000078214.5 ENSMUST00000105016.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2615;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_4520084_C/T chrX:4520084 T ENSMUSG00000078214.5 ENSMUST00000105016.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2914;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_4531500_T/A chrX:4531500 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4546353_G/T chrX:4546353 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4555824_G/A chrX:4555824 A ENSMUSG00000096800.1 ENSMUST00000151048.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1451;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_4563466_C/G chrX:4563466 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4647266_G/A chrX:4647266 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_4843281_A/T chrX:4843281 T ENSMUSG00000094693.1 ENSMUST00000135604.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3339;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_5083285_C/A chrX:5083285 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_5086736_A/T chrX:5086736 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_5093654_G/T chrX:5093654 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_5152131_G/C chrX:5152131 C ENSMUSG00000080792.1 ENSMUST00000119214.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1959;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_5885091_TT/-/T chrX:5885091-5885092 - ENSMUSG00000080186.2 ENSMUST00000116383.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=651;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_5885091_TT/-/T chrX:5885091-5885092 T ENSMUSG00000080186.2 ENSMUST00000116383.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=651;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_5939716_A/C chrX:5939716 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_6183771_TTT/-/TT chrX:6183771-6183773 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_6183771_TTT/-/TT chrX:6183771-6183773 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_6552149_TG/CT chrX:6552149-6552150 CT ENSMUSG00000068270.15 ENSMUST00000103005.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_6552149_TG/CT chrX:6552149-6552150 CT ENSMUSG00000068270.15 ENSMUST00000143641.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_6884947_GTGT/-/GT chrX:6884947-6884950 - ENSMUSG00000062393.13 ENSMUST00000067410.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_6884947_GTGT/-/GT chrX:6884947-6884950 GT ENSMUSG00000062393.13 ENSMUST00000067410.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_6884947_GTGT/-/GT chrX:6884947-6884950 - ENSMUSG00000062393.13 ENSMUST00000145302.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_6884947_GTGT/-/GT chrX:6884947-6884950 GT ENSMUSG00000062393.13 ENSMUST00000145302.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_7196462_ACAC/- chrX:7196462-7196465 - ENSMUSG00000004317.14 ENSMUST00000115746.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_7196462_ACAC/- chrX:7196462-7196465 - ENSMUSG00000004317.14 ENSMUST00000128319.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_7745581_CACA/- chrX:7745581-7745584 - ENSMUSG00000031150.13 ENSMUST00000033490.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_7745581_CACA/- chrX:7745581-7745584 - ENSMUSG00000031150.13 ENSMUST00000128852.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4257;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_7745581_CACA/- chrX:7745581-7745584 - ENSMUSG00000031150.13 ENSMUST00000139499.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_7745581_CACA/- chrX:7745581-7745584 - ENSMUSG00000031150.13 ENSMUST00000153925.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4273;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_7745581_CACA/- chrX:7745581-7745584 - ENSMUSG00000031150.13 ENSMUST00000154977.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_8165083_-/TTTTTTTTTTTT chrX:8165082-8165083 TTTTTTTTTTTT ENSMUSG00000039201.9 ENSMUST00000039892.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_8165083_-/TTTTTTTTTTTT chrX:8165082-8165083 TTTTTTTTTTTT ENSMUSG00000039201.9 ENSMUST00000133093.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_8165083_-/TTTTTTTTTTTT chrX:8165082-8165083 TTTTTTTTTTTT ENSMUSG00000039201.9 ENSMUST00000143984.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_8165083_-/TTTTTTTTTTTT chrX:8165082-8165083 TTTTTTTTTTTT ENSMUSG00000039201.9 ENSMUST00000172020.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_8221022_AA/- chrX:8221022-8221023 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_8792264_CA/C/AA chrX:8792264-8792265 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_8792264_CA/C/AA chrX:8792264-8792265 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_8955722_T/A chrX:8955722 A ENSMUSG00000080051.2 ENSMUST00000116165.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3590;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_8955722_T/A chrX:8955722 A ENSMUSG00000083871.1 ENSMUST00000121706.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=585;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_9178925_-/C chrX:9178924-9178925 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_9509504_T/A chrX:9509504 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_9718833_T/C chrX:9718833 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_9725158_TTT/-/TT chrX:9725158-9725160 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_9725158_TTT/-/TT chrX:9725158-9725160 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_10045636_T/C chrX:10045636 C ENSMUSG00000090084.7 ENSMUST00000044789.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10045636_T/C chrX:10045636 C ENSMUSG00000090084.7 ENSMUST00000115543.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10045636_T/C chrX:10045636 C ENSMUSG00000090084.7 ENSMUST00000115544.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000044598.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000072393.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000073392.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000115532.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000115533.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000115534.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000124744.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=572;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10206428_AA/- chrX:10206428-10206429 - ENSMUSG00000031174.17 ENSMUST00000155734.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10341533_T/-/TTT chrX:10341533 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_10341533_T/-/TTT chrX:10341533 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_10581174_AA/- chrX:10581174-10581175 - ENSMUSG00000058254.12 ENSMUST00000076354.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10581174_AA/- chrX:10581174-10581175 - ENSMUSG00000058254.12 ENSMUST00000115526.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10581174_AA/- chrX:10581174-10581175 - ENSMUSG00000058254.12 ENSMUST00000149982.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_10824127_AGAG/- chrX:10824127-10824130 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_11333326_CACA/- chrX:11333326-11333329 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_11815666_ACAC/- chrX:11815666-11815669 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_12142381_AAAAAA/-/AAAAA chrX:12142381-12142386 - ENSMUSG00000040363.15 ENSMUST00000043441.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_12142381_AAAAAA/-/AAAAA chrX:12142381-12142386 AAAAA ENSMUSG00000040363.15 ENSMUST00000043441.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_12142381_AAAAAA/-/AAAAA chrX:12142381-12142386 - ENSMUSG00000040363.15 ENSMUST00000209776.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_12142381_AAAAAA/-/AAAAA chrX:12142381-12142386 AAAAA ENSMUSG00000040363.15 ENSMUST00000209776.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_12210688_G/C chrX:12210688 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_12796148_ACAC/- chrX:12796148-12796151 - ENSMUSG00000085891.7 ENSMUST00000139163.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_12796148_ACAC/- chrX:12796148-12796151 - ENSMUSG00000085891.7 ENSMUST00000151112.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_13404577_-/GAA chrX:13404576-13404577 GAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_13979942_AA/- chrX:13979942-13979943 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_14027034_-/GGTAGGTGAGCA chrX:14027033-14027034 GGTAGGTGAGCA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_14402103_T/G chrX:14402103 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_14450439_TT/-/TTT chrX:14450439-14450440 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_14450439_TT/-/TTT chrX:14450439-14450440 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_14559548_TGTGTG/- chrX:14559548-14559553 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_15019705_TCTCTC/- chrX:15019705-15019710 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_15073945_TTTT/-/TTTTT chrX:15073945-15073948 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_15073945_TTTT/-/TTTTT chrX:15073945-15073948 TTTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_15575407_-/TAGA chrX:15575406-15575407 TAGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_15796512_A/T chrX:15796512 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_16035349_-/TATT chrX:16035348-16035349 TATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_16440257_A/T chrX:16440257 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_16440285_A/G chrX:16440285 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_16462975_ACACAC/-/AC chrX:16462975-16462980 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_16462975_ACACAC/-/AC chrX:16462975-16462980 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_16926097_CC/- chrX:16926097-16926098 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_17463312_AA/- chrX:17463312-17463313 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_17997253_GAGA/- chrX:17997253-17997256 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_18273555_GT/G/TT chrX:18273555-18273556 G ENSMUSG00000037369.17 ENSMUST00000044484.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 TT ENSMUSG00000037369.17 ENSMUST00000044484.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 G ENSMUSG00000037369.17 ENSMUST00000052368.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 TT ENSMUSG00000037369.17 ENSMUST00000052368.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 G ENSMUSG00000037369.17 ENSMUST00000155161.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=956;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 TT ENSMUSG00000037369.17 ENSMUST00000155161.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=956;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 G ENSMUSG00000037369.17 ENSMUST00000223885.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4297;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 TT ENSMUSG00000037369.17 ENSMUST00000223885.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4297;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 G ENSMUSG00000037369.17 ENSMUST00000225336.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18273555_GT/G/TT chrX:18273555-18273556 TT ENSMUSG00000037369.17 ENSMUST00000225336.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18440306_AGATAGATAGATAGAT/-/AGAT chrX:18440306-18440321 - ENSMUSG00000037358.6 ENSMUST00000044188.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18440306_AGATAGATAGATAGAT/-/AGAT chrX:18440306-18440321 AGAT ENSMUSG00000037358.6 ENSMUST00000044188.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18440306_AGATAGATAGATAGAT/-/AGAT chrX:18440306-18440321 - ENSMUSG00000037358.6 ENSMUST00000147039.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18440306_AGATAGATAGATAGAT/-/AGAT chrX:18440306-18440321 AGAT ENSMUSG00000037358.6 ENSMUST00000147039.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_18796874_-/G chrX:18796873-18796874 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_18796874_A/C chrX:18796874 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_19086972_AA/- chrX:19086972-19086973 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_19193149_C/G chrX:19193149 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_19390056_TGTGTG/- chrX:19390056-19390061 - ENSMUSG00000082680.1 ENSMUST00000117969.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3270;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_19583265_TGTG/-/TG chrX:19583265-19583268 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_19583265_TGTG/-/TG chrX:19583265-19583268 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_19714180_T/- chrX:19714180 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_19742967_AA/- chrX:19742967-19742968 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_19995325_T/A chrX:19995325 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_20057278_GTGT/-/GT chrX:20057278-20057281 - ENSMUSG00000037347.7 ENSMUST00000044138.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2279;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_20057278_GTGT/-/GT chrX:20057278-20057281 GT ENSMUSG00000037347.7 ENSMUST00000044138.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2279;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_21193841_-/T chrX:21193840-21193841 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_21671571_A/C chrX:21671571 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_21683789_-/CTTT chrX:21683788-21683789 CTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_21773218_-/CTAT chrX:21773217-21773218 CTAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_21912183_GTGT/- chrX:21912183-21912186 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_21956012_ATAT/-/AT/ATATAT chrX:21956012-21956015 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_21956012_ATAT/-/AT/ATATAT chrX:21956012-21956015 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_21956012_ATAT/-/AT/ATATAT chrX:21956012-21956015 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_22048582_T/A chrX:22048582 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_22491224_T/G chrX:22491224 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_22746483_AC/- chrX:22746483-22746484 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_23534888_A/G chrX:23534888 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_23534898_A/C chrX:23534898 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_23672817_TCTC/- chrX:23672817-23672820 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 G ENSMUSG00000036769.14 ENSMUST00000035766.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 ATATA ENSMUSG00000036769.14 ENSMUST00000035766.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2054;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 G ENSMUSG00000036769.14 ENSMUST00000101670.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2099;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 ATATA ENSMUSG00000036769.14 ENSMUST00000101670.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2099;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 G ENSMUSG00000036769.14 ENSMUST00000142600.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2080;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 ATATA ENSMUSG00000036769.14 ENSMUST00000142600.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2080;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 G ENSMUSG00000036769.14 ENSMUST00000149483.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2162;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23690993_GTATA/G/ATATA chrX:23690993-23690997 ATATA ENSMUSG00000036769.14 ENSMUST00000149483.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2162;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_23876816_-/TTCTC chrX:23876815-23876816 TTCTC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_23934810_ACAC/-/AC chrX:23934810-23934813 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_23934810_ACAC/-/AC chrX:23934810-23934813 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_23974416_T/C chrX:23974416 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_24172521_TA/- chrX:24172521-24172522 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_24683652_T/C chrX:24683652 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_24710249_GAGA/- chrX:24710249-24710252 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_25683148_C/A chrX:25683148 A ENSMUSG00000098849.1 ENSMUST00000185017.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3628;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_25701947_G/A chrX:25701947 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_25742573_T/C chrX:25742573 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_25848397_T/G chrX:25848397 G ENSMUSG00000095392.1 ENSMUST00000120964.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2730;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_25957368_T/C chrX:25957368 C ENSMUSG00000086959.1 ENSMUST00000136639.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2672;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_26138318_TT/CA/CT chrX:26138318-26138319 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_26138318_TT/CA/CT chrX:26138318-26138319 CT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_26138429_T/C chrX:26138429 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_26138449_C/T chrX:26138449 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_26180203_A/C chrX:26180203 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_26572600_C/G chrX:26572600 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_26831015_A/C chrX:26831015 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31134890_C/T chrX:31134890 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31168482_A/T chrX:31168482 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31168499_C/A chrX:31168499 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31193448_G/A chrX:31193448 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31195456_-/C chrX:31195455-31195456 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31211494_G/A chrX:31211494 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31253644_G/C chrX:31253644 C ENSMUSG00000095754.1 ENSMUST00000177990.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=250;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_31253685_C/A chrX:31253685 A ENSMUSG00000095754.1 ENSMUST00000177990.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=209;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_31267255_A/G chrX:31267255 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31272525_T/G chrX:31272525 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31340546_C/T chrX:31340546 T ENSMUSG00000095229.1 ENSMUST00000180197.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2596;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_31632252_A/C chrX:31632252 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31632295_C/T chrX:31632295 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31931362_C/T chrX:31931362 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31931389_G/A chrX:31931389 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_31931470_G/T chrX:31931470 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32031788_A/T chrX:32031788 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32032061_A/C chrX:32032061 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32095150_T/G chrX:32095150 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32109546_TT/AA chrX:32109546-32109547 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32445448_T/A chrX:32445448 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32449720_AT/GG chrX:32449720-32449721 GG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32500475_-/A chrX:32500474-32500475 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32591277_A/G chrX:32591277 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32591680_A/T chrX:32591680 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32601263_G/- chrX:32601263 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_32878870_C/T chrX:32878870 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33020342_TATTTATT/- chrX:33020342-33020349 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33283032_C/T chrX:33283032 T ENSMUSG00000086246.2 ENSMUST00000131442.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=709;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33283032_C/T chrX:33283032 T ENSMUSG00000084982.1 ENSMUST00000154752.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=586;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33294195_C/T chrX:33294195 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33357682_C/T chrX:33357682 T ENSMUSG00000087224.1 ENSMUST00000145243.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4746;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33357687_G/A chrX:33357687 A ENSMUSG00000087224.1 ENSMUST00000145243.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4751;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33357982_A/T chrX:33357982 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33404566_G/T chrX:33404566 T ENSMUSG00000114725.1 ENSMUST00000225812.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4443;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33407850_T/C chrX:33407850 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33424930_G/C chrX:33424930 C ENSMUSG00000085552.1 ENSMUST00000124692.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2964;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33424930_G/C chrX:33424930 C ENSMUSG00000087649.2 ENSMUST00000139887.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1374;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33425205_G/C chrX:33425205 C ENSMUSG00000085552.1 ENSMUST00000124692.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2689;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33425205_G/C chrX:33425205 C ENSMUSG00000087649.2 ENSMUST00000139887.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1099;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_33766975_T/A chrX:33766975 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33783872_AG/- chrX:33783872-33783873 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33807311_A/T chrX:33807311 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33898484_G/A chrX:33898484 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33925725_C/G chrX:33925725 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33976739_A/T chrX:33976739 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_33983196_G/A chrX:33983196 A ENSMUSG00000094564.1 ENSMUST00000179973.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2443;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_34012015_T/C chrX:34012015 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34022483_C/A chrX:34022483 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34313929_C/G chrX:34313929 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34318345_C/T chrX:34318345 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34328572_-/G chrX:34328571-34328572 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34333136_-/A chrX:34333135-34333136 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34485323_G/A chrX:34485323 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34485650_TG/- chrX:34485650-34485651 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34510983_G/A chrX:34510983 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34511062_C/T chrX:34511062 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_34594308_C/T chrX:34594308 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_35665539_C/A chrX:35665539 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_35665546_C/T chrX:35665546 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_35861509_T/C chrX:35861509 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_36092873_-/TT/T chrX:36092872-36092873 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_36092873_-/TT/T chrX:36092872-36092873 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_36122490_C/- chrX:36122490 - ENSMUSG00000017057.9 ENSMUST00000033418.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_36257955_GAGAGA/- chrX:36257955-36257960 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_36599100_TGTGTG/- chrX:36599100-36599105 - ENSMUSG00000006373.10 ENSMUST00000073339.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_36935054_C/G chrX:36935054 G ENSMUSG00000050379.15 ENSMUST00000053456.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_36935054_C/G chrX:36935054 G ENSMUSG00000050379.15 ENSMUST00000060474.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_36935054_C/G chrX:36935054 G ENSMUSG00000050379.15 ENSMUST00000115239.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_37066409_TT/-/T chrX:37066409-37066410 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_37066409_TT/-/T chrX:37066409-37066410 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_37068180_AA/-/A chrX:37068180-37068181 - ENSMUSG00000093059.2 ENSMUST00000175318.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3811;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_37068180_AA/-/A chrX:37068180-37068181 A ENSMUSG00000093059.2 ENSMUST00000175318.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3811;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_37618110_A/C chrX:37618110 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_37618131_T/G chrX:37618131 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_38151707_A/- chrX:38151707 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_38638444_C/T chrX:38638444 T ENSMUSG00000048970.9 ENSMUST00000058265.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3357;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_39331929_C/T chrX:39331929 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_39740340_G/A chrX:39740340 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_39827090_ATAT/-/AT chrX:39827090-39827093 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_39827090_ATAT/-/AT chrX:39827090-39827093 AT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_40061104_GTGT/- chrX:40061104-40061107 - ENSMUSG00000086157.1 ENSMUST00000144412.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_40150516_A/C chrX:40150516 C ENSMUSG00000086157.1 ENSMUST00000144412.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_40248208_G/T chrX:40248208 T ENSMUSG00000086157.1 ENSMUST00000144412.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_40261762_AA/-/AAA chrX:40261762-40261763 - ENSMUSG00000086157.1 ENSMUST00000144412.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_40261762_AA/-/AAA chrX:40261762-40261763 AAA ENSMUSG00000086157.1 ENSMUST00000144412.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_40421400_AAA/- chrX:40421400-40421402 - ENSMUSG00000086157.1 ENSMUST00000144412.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_40842424_ATAT/- chrX:40842424-40842427 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_41119140_TT/- chrX:41119140-41119141 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_42087764_GTGT/-/GT chrX:42087764-42087767 - ENSMUSG00000025860.15 ENSMUST00000055483.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 GT ENSMUSG00000025860.15 ENSMUST00000055483.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 - ENSMUSG00000025860.15 ENSMUST00000115094.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 GT ENSMUSG00000025860.15 ENSMUST00000115094.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 - ENSMUSG00000025860.15 ENSMUST00000115095.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 GT ENSMUSG00000025860.15 ENSMUST00000115095.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 - ENSMUSG00000025860.15 ENSMUST00000126375.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 GT ENSMUSG00000025860.15 ENSMUST00000126375.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 - ENSMUSG00000025860.15 ENSMUST00000145065.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 GT ENSMUSG00000025860.15 ENSMUST00000145065.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 - ENSMUSG00000025860.15 ENSMUST00000150635.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 GT ENSMUSG00000025860.15 ENSMUST00000150635.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 - ENSMUSG00000025860.15 ENSMUST00000224454.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42087764_GTGT/-/GT chrX:42087764-42087767 GT ENSMUSG00000025860.15 ENSMUST00000224454.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42127422_C/A chrX:42127422 A ENSMUSG00000082324.1 ENSMUST00000117575.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=773;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42232864_TT/-/T chrX:42232864-42232865 - ENSMUSG00000025862.14 ENSMUST00000069619.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42232864_TT/-/T chrX:42232864-42232865 T ENSMUSG00000025862.14 ENSMUST00000069619.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42232864_TT/-/T chrX:42232864-42232865 - ENSMUSG00000025862.14 ENSMUST00000115072.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42232864_TT/-/T chrX:42232864-42232865 T ENSMUSG00000025862.14 ENSMUST00000115072.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42232864_TT/-/T chrX:42232864-42232865 - ENSMUSG00000025862.14 ENSMUST00000115073.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42232864_TT/-/T chrX:42232864-42232865 T ENSMUSG00000025862.14 ENSMUST00000115073.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42573542_C/T chrX:42573542 T ENSMUSG00000016150.15 ENSMUST00000016294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42573542_C/T chrX:42573542 T ENSMUSG00000016150.15 ENSMUST00000115058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42573542_C/T chrX:42573542 T ENSMUSG00000016150.15 ENSMUST00000115059.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42573555_A/G chrX:42573555 G ENSMUSG00000016150.15 ENSMUST00000016294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42573555_A/G chrX:42573555 G ENSMUSG00000016150.15 ENSMUST00000115058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42573555_A/G chrX:42573555 G ENSMUSG00000016150.15 ENSMUST00000115059.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42839482_GTGT/- chrX:42839482-42839485 - ENSMUSG00000016150.15 ENSMUST00000016294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42839482_GTGT/- chrX:42839482-42839485 - ENSMUSG00000016150.15 ENSMUST00000115058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42839482_GTGT/- chrX:42839482-42839485 - ENSMUSG00000016150.15 ENSMUST00000115059.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_42839482_GTGT/- chrX:42839482-42839485 - ENSMUSG00000016150.15 ENSMUST00000154433.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 - ENSMUSG00000016150.15 ENSMUST00000016294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 AC ENSMUSG00000016150.15 ENSMUST00000016294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 - ENSMUSG00000016150.15 ENSMUST00000115058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 AC ENSMUSG00000016150.15 ENSMUST00000115058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 - ENSMUSG00000016150.15 ENSMUST00000115059.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 AC ENSMUSG00000016150.15 ENSMUST00000115059.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 - ENSMUSG00000016150.15 ENSMUST00000126161.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 AC ENSMUSG00000016150.15 ENSMUST00000126161.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 - ENSMUSG00000016150.15 ENSMUST00000154433.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43087149_ACAC/-/AC chrX:43087149-43087152 AC ENSMUSG00000016150.15 ENSMUST00000154433.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 - ENSMUSG00000016150.15 ENSMUST00000016294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 TT ENSMUSG00000016150.15 ENSMUST00000016294.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 - ENSMUSG00000016150.15 ENSMUST00000115058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 TT ENSMUSG00000016150.15 ENSMUST00000115058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 - ENSMUSG00000016150.15 ENSMUST00000115059.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 TT ENSMUSG00000016150.15 ENSMUST00000115059.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 - ENSMUSG00000016150.15 ENSMUST00000126161.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 TT ENSMUSG00000016150.15 ENSMUST00000126161.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 - ENSMUSG00000016150.15 ENSMUST00000154433.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43122575_T/-/TT chrX:43122575 TT ENSMUSG00000016150.15 ENSMUST00000154433.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43429508_ACAC/- chrX:43429508-43429511 - ENSMUSG00000016150.15 ENSMUST00000125231.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=505;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43429508_ACAC/- chrX:43429508-43429511 - ENSMUSG00000016150.15 ENSMUST00000126161.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=382;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43429508_ACAC/- chrX:43429508-43429511 - ENSMUSG00000016150.15 ENSMUST00000154433.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=505;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_43893148_TT/-/T chrX:43893148-43893149 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_43893148_TT/-/T chrX:43893148-43893149 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_44612753_C/A chrX:44612753 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_45003107_ATAT/- chrX:45003107-45003110 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_45145563_A/C chrX:45145563 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_45253182_A/T chrX:45253182 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_45294254_AGAG/-/AG chrX:45294254-45294257 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_45294254_AGAG/-/AG chrX:45294254-45294257 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_45505101_C/A chrX:45505101 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_45795599_G/A chrX:45795599 A ENSMUSG00000064464.1 ENSMUST00000082530.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=132;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_46272832_C/T chrX:46272832 T ENSMUSG00000085157.1 ENSMUST00000152352.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_46279341_A/- chrX:46279341 - ENSMUSG00000085157.1 ENSMUST00000152352.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_47006268_T/C chrX:47006268 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_47820693_AAAA/- chrX:47820693-47820696 - ENSMUSG00000031099.16 ENSMUST00000077569.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_47820693_AAAA/- chrX:47820693-47820696 - ENSMUSG00000031099.16 ENSMUST00000088973.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_47820693_AAAA/- chrX:47820693-47820696 - ENSMUSG00000031099.16 ENSMUST00000101616.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48265120_TTTT/- chrX:48265120-48265123 - ENSMUSG00000063785.12 ENSMUST00000080713.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48265120_TTTT/- chrX:48265120-48265123 - ENSMUSG00000063785.12 ENSMUST00000125966.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48265120_TTTT/- chrX:48265120-48265123 - ENSMUSG00000063785.12 ENSMUST00000152624.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48507205_C/T chrX:48507205 T ENSMUSG00000036932.14 ENSMUST00000037349.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48507205_C/T chrX:48507205 T ENSMUSG00000036932.14 ENSMUST00000114945.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48507205_C/T chrX:48507205 T ENSMUSG00000036932.14 ENSMUST00000143466.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48705531_T/C chrX:48705531 C ENSMUSG00000031107.6 ENSMUST00000033433.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_48705531_T/C chrX:48705531 C ENSMUSG00000031107.6 ENSMUST00000139150.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=649;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000033437.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000033437.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000114911.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000114911.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000114912.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000114912.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000114914.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000114914.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000114918.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000114918.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000137518.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000137518.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000141393.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000141393.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 - ENSMUSG00000031109.16 ENSMUST00000155770.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49278460_AGAG/-/AG chrX:49278460-49278463 AG ENSMUSG00000031109.16 ENSMUST00000155770.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49313194_CACA/- chrX:49313194-49313197 - ENSMUSG00000087369.1 ENSMUST00000144294.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=122;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_49976618_A/G chrX:49976618 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_49976627_C/G chrX:49976627 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_49998051_C/T chrX:49998051 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50040458_AA/-/A chrX:50040458-50040459 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50040458_AA/-/A chrX:50040458-50040459 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50060885_T/G chrX:50060885 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50060903_A/C chrX:50060903 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50185604_AAAA/- chrX:50185604-50185607 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50189365_ACA/- chrX:50189365-50189367 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50189371_T/C chrX:50189371 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50318441_AAA/-/AAAA chrX:50318441-50318443 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_50318441_AAA/-/AAAA chrX:50318441-50318443 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_51762404_AGAG/- chrX:51762404-51762407 - ENSMUSG00000055780.10 ENSMUST00000069509.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_51762404_AGAG/- chrX:51762404-51762407 - ENSMUSG00000055780.10 ENSMUST00000114869.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52109500_TCTC/- chrX:52109500-52109503 - ENSMUSG00000031119.4 ENSMUST00000033450.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52462636_TGTG/- chrX:52462636-52462639 - ENSMUSG00000055653.13 ENSMUST00000069360.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52462636_TGTG/- chrX:52462636-52462639 - ENSMUSG00000055653.13 ENSMUST00000114857.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52588350_TT/- chrX:52588350-52588351 - ENSMUSG00000055110.8 ENSMUST00000068507.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52588350_TT/- chrX:52588350-52588351 - ENSMUSG00000055653.13 ENSMUST00000069360.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52588350_TT/- chrX:52588350-52588351 - ENSMUSG00000055110.8 ENSMUST00000114854.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52588350_TT/- chrX:52588350-52588351 - ENSMUSG00000055653.13 ENSMUST00000114857.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_52772290_-/T chrX:52772289-52772290 T ENSMUSG00000083621.1 ENSMUST00000119571.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=52;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_53358384_GTGT/- chrX:53358384-53358387 - ENSMUSG00000023074.11 ENSMUST00000023836.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_53358384_GTGT/- chrX:53358384-53358387 - ENSMUSG00000023074.11 ENSMUST00000096447.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_53358384_GTGT/- chrX:53358384-53358387 - ENSMUSG00000023074.11 ENSMUST00000152743.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_54078365_T/- chrX:54078365 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_55600985_G/A chrX:55600985 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_55749888_-/T/TT chrX:55749887-55749888 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_55749888_-/T/TT chrX:55749887-55749888 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_56120663_A/C chrX:56120663 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_56184258_G/T chrX:56184258 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_56559844_GAGA/- chrX:56559844-56559847 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_56681304_A/- chrX:56681304 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_56841826_A/C chrX:56841826 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_56841831_A/C chrX:56841831 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_56997467_TCTC/- chrX:56997467-56997470 - ENSMUSG00000053852.11 ENSMUST00000136396.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_57130611_A/- chrX:57130611 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_57378411_C/A chrX:57378411 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_57473508_GATT/- chrX:57473508-57473511 - ENSMUSG00000079584.2 ENSMUST00000114725.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_57581147_TT/-/TTT chrX:57581147-57581148 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_57581147_TT/-/TTT chrX:57581147-57581148 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_57728525_TCTCTC/- chrX:57728525-57728530 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_58075109_AGAG/-/AG chrX:58075109-58075112 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_58075109_AGAG/-/AG chrX:58075109-58075112 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_58567781_-/T chrX:58567780-58567781 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_58655515_AGAG/-/AG chrX:58655515-58655518 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_58655515_AGAG/-/AG chrX:58655515-58655518 AG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_58845727_G/A chrX:58845727 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_58981333_A/- chrX:58981333 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_59318246_ACAC/-/AC chrX:59318246-59318249 - ENSMUSG00000031137.17 ENSMUST00000119833.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59318246_ACAC/-/AC chrX:59318246-59318249 AC ENSMUSG00000031137.17 ENSMUST00000119833.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59318246_ACAC/-/AC chrX:59318246-59318249 - ENSMUSG00000031137.17 ENSMUST00000124402.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59318246_ACAC/-/AC chrX:59318246-59318249 AC ENSMUSG00000031137.17 ENSMUST00000124402.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59318246_ACAC/-/AC chrX:59318246-59318249 - ENSMUSG00000031137.17 ENSMUST00000131319.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59318246_ACAC/-/AC chrX:59318246-59318249 AC ENSMUSG00000031137.17 ENSMUST00000131319.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59318246_ACAC/-/AC chrX:59318246-59318249 - ENSMUSG00000031137.17 ENSMUST00000145767.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59318246_ACAC/-/AC chrX:59318246-59318249 AC ENSMUSG00000031137.17 ENSMUST00000145767.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_59914913_TCTC/- chrX:59914913-59914916 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_59929182_ACGGTGTGGAATACAGAGGCCAGCCGTTTCTGGGAAAGGCAAGAGCCAGAGAGCTTCTGAGGCTGCGCCATCTTAGGCTCCAGACAACCGGCCACCTTCCTGACAACTGGCCACCTTCCGGGTGAGGGCACAGGGATCCACCAGCCCGAGAGGTTTGTGCCTCAGGCCCCGGCGGCTGGAGCCTCCTTGGATCCAGGACTCCGCGGAGAGCAGGCTGCACGGGTA/- chrX:59929182-59929406 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_60044856_TT/- chrX:60044856-60044857 - ENSMUSG00000046993.6 ENSMUST00000153890.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=254;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_60844313_TATA/-/TA chrX:60844313-60844316 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_60844313_TATA/-/TA chrX:60844313-60844316 TA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000096426.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000096426.5 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000125930.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000125930.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000137153.7 Transcript non_coding_transcript_exon_variant 336-339 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000137153.7 Transcript non_coding_transcript_exon_variant 336-339 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000140023.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000140023.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000144853.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000144853.8 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000231449.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000231449.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000232283.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000232283.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000232361.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000232361.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 - ENSMUSG00000071753.12 ENSMUST00000232525.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61118849_TATA/-/TATATA chrX:61118849-61118852 TATATA ENSMUSG00000071753.12 ENSMUST00000232525.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61286107_C/A chrX:61286107 A ENSMUSG00000071753.12 ENSMUST00000232361.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61286107_C/A chrX:61286107 A ENSMUSG00000071753.12 ENSMUST00000232598.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2081;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_61411595_CACA/- chrX:61411595-61411598 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_61459840_TT/- chrX:61459840-61459841 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_61652165_G/T chrX:61652165 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_62072438_A/T chrX:62072438 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_62121463_G/T chrX:62121463 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_62121473_T/C chrX:62121473 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_62503691_GAGA/- chrX:62503691-62503694 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_63025980_TT/-/T chrX:63025980-63025981 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_63025980_TT/-/T chrX:63025980-63025981 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_63246389_ACAC/- chrX:63246389-63246392 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_63776419_G/C chrX:63776419 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_64158883_AGAGAG/- chrX:64158883-64158888 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_65093641_C/T chrX:65093641 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_65975007_T/C chrX:65975007 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_65981873_-/AA chrX:65981872-65981873 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_66145221_TCCCGTGGGGAGTCCCGTGTGGGCCCTTGTGGGTGTTGGGCAAGACTCTGCTGGCAATGTAGCCCGGGGCTCGAGTCTCCAGTCGAGCGGAAGGGACTTGTGCCCCAGATCAGGCCCGGGTAGCCTGCTTCCCTATGTACTGCAGTCTCAGGTTCCGCACGATTGGATTGGGGCAGGTGCTGTGTTCCACTCACCAGAGGTCTTAGGG/- chrX:66145221-66145428 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_66778447_G/C chrX:66778447 C ENSMUSG00000077092.1 ENSMUST00000103904.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1926;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_66778447_G/C chrX:66778447 C ENSMUSG00000077127.1 ENSMUST00000103939.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1629;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_66778447_G/C chrX:66778447 C ENSMUSG00000094184.1 ENSMUST00000104751.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1115;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_66778447_G/C chrX:66778447 C ENSMUSG00000078017.1 ENSMUST00000104824.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2311;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_66778447_G/C chrX:66778447 C ENSMUSG00000081603.1 ENSMUST00000118047.1 Transcript non_coding_transcript_exon_variant 406 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_67342707_C/T chrX:67342707 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_67718733_C/T chrX:67718733 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_67718736_-/ACTGATAAGTGGA chrX:67718735-67718736 ACTGATAAGTGGA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_68147376_ACAC/-/AC chrX:68147376-68147379 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_68147376_ACAC/-/AC chrX:68147376-68147379 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_68272321_-/A chrX:68272320-68272321 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_69125141_TAATAA/- chrX:69125141-69125146 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_69375635_GTGT/- chrX:69375635-69375638 - ENSMUSG00000031189.12 ENSMUST00000033532.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69375635_GTGT/- chrX:69375635-69375638 - ENSMUSG00000031189.12 ENSMUST00000139977.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69375635_GTGT/- chrX:69375635-69375638 - ENSMUSG00000031189.12 ENSMUST00000143097.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69376080_ATAT/-/AT chrX:69376080-69376083 - ENSMUSG00000031189.12 ENSMUST00000033532.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69376080_ATAT/-/AT chrX:69376080-69376083 AT ENSMUSG00000031189.12 ENSMUST00000033532.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69376080_ATAT/-/AT chrX:69376080-69376083 - ENSMUSG00000031189.12 ENSMUST00000139977.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69376080_ATAT/-/AT chrX:69376080-69376083 AT ENSMUSG00000031189.12 ENSMUST00000139977.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69376080_ATAT/-/AT chrX:69376080-69376083 - ENSMUSG00000031189.12 ENSMUST00000143097.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69376080_ATAT/-/AT chrX:69376080-69376083 AT ENSMUSG00000031189.12 ENSMUST00000143097.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69455508_TT/- chrX:69455508-69455509 - ENSMUSG00000031189.12 ENSMUST00000033532.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69455508_TT/- chrX:69455508-69455509 - ENSMUSG00000031189.12 ENSMUST00000139977.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_69455508_TT/- chrX:69455508-69455509 - ENSMUSG00000031189.12 ENSMUST00000143097.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_70033998_GAGA/-/GA chrX:70033998-70034001 - ENSMUSG00000100511.1 ENSMUST00000188663.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_70033998_GAGA/-/GA chrX:70033998-70034001 GA ENSMUSG00000100511.1 ENSMUST00000188663.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_70253272_A/G chrX:70253272 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_70850114_C/A chrX:70850114 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_70998178_ACAC/- chrX:70998178-70998181 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000025391.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000033700.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000061970.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000101501.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000114617.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000114621.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000126208.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000134859.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000151415.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000152810.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000156452.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71222938_T/- chrX:71222938 - ENSMUSG00000031337.16 ENSMUST00000171933.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000025391.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000033700.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000061970.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000114617.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000114621.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000129722.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000134859.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4231;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000156452.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71303092_CC/- chrX:71303092-71303093 - ENSMUSG00000031337.16 ENSMUST00000171933.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 C ENSMUSG00000035776.14 ENSMUST00000037391.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 AAAAA ENSMUSG00000035776.14 ENSMUST00000037391.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 CAAAAA ENSMUSG00000035776.14 ENSMUST00000037391.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 C ENSMUSG00000035776.14 ENSMUST00000080035.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 AAAAA ENSMUSG00000035776.14 ENSMUST00000080035.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 CAAAAA ENSMUSG00000035776.14 ENSMUST00000080035.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 C ENSMUSG00000035776.14 ENSMUST00000114586.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 AAAAA ENSMUSG00000035776.14 ENSMUST00000114586.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 CAAAAA ENSMUSG00000035776.14 ENSMUST00000114586.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 C ENSMUSG00000035776.14 ENSMUST00000114587.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 AAAAA ENSMUSG00000035776.14 ENSMUST00000114587.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 CAAAAA ENSMUSG00000035776.14 ENSMUST00000114587.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1036;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 C ENSMUSG00000084114.1 ENSMUST00000119439.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4483;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 AAAAA ENSMUSG00000084114.1 ENSMUST00000119439.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4483;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 CAAAAA ENSMUSG00000084114.1 ENSMUST00000119439.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4483;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 C ENSMUSG00000035776.14 ENSMUST00000128515.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1236;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 AAAAA ENSMUSG00000035776.14 ENSMUST00000128515.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1236;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 CAAAAA ENSMUSG00000035776.14 ENSMUST00000128515.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1236;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 C ENSMUSG00000035776.14 ENSMUST00000148177.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1280;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 AAAAA ENSMUSG00000035776.14 ENSMUST00000148177.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1280;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_71493885_CAAAA/C/AAAAA/CAAAAA chrX:71493885-71493889 CAAAAA ENSMUSG00000035776.14 ENSMUST00000148177.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1280;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_72240564_TT/- chrX:72240564-72240565 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_72344000_AGAG/-/AGAGAG chrX:72344000-72344003 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_72344000_AGAG/-/AGAGAG chrX:72344000-72344003 AGAGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_72405337_C/T chrX:72405337 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_72405355_T/C chrX:72405355 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_72877835_T/C chrX:72877835 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_73185686_G/A chrX:73185686 A ENSMUSG00000058328.13 ENSMUST00000179600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_73185710_G/T chrX:73185710 T ENSMUSG00000058328.13 ENSMUST00000179600.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081033_G/T chrX:74081033 T ENSMUSG00000031393.16 ENSMUST00000033770.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081033_G/T chrX:74081033 T ENSMUSG00000031393.16 ENSMUST00000100750.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081033_G/T chrX:74081033 T ENSMUSG00000031393.16 ENSMUST00000123362.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081033_G/T chrX:74081033 T ENSMUSG00000031393.16 ENSMUST00000140399.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081033_G/T chrX:74081033 T ENSMUSG00000031393.16 ENSMUST00000170481.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081033_G/T chrX:74081033 T ENSMUSG00000031393.16 ENSMUST00000198358.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081037_G/T chrX:74081037 T ENSMUSG00000031393.16 ENSMUST00000033770.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081037_G/T chrX:74081037 T ENSMUSG00000031393.16 ENSMUST00000100750.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081037_G/T chrX:74081037 T ENSMUSG00000031393.16 ENSMUST00000123362.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081037_G/T chrX:74081037 T ENSMUSG00000031393.16 ENSMUST00000140399.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081037_G/T chrX:74081037 T ENSMUSG00000031393.16 ENSMUST00000170481.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74081037_G/T chrX:74081037 T ENSMUSG00000031393.16 ENSMUST00000198358.1 Transcript non_coding_transcript_exon_variant 4561 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 - ENSMUSG00000031393.16 ENSMUST00000033770.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1608;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 GT ENSMUSG00000031393.16 ENSMUST00000033770.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1608;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 - ENSMUSG00000031393.16 ENSMUST00000100750.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1629;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 GT ENSMUSG00000031393.16 ENSMUST00000100750.9 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1629;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 - ENSMUSG00000031393.16 ENSMUST00000123362.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1686;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 GT ENSMUSG00000031393.16 ENSMUST00000123362.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1686;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 - ENSMUSG00000031393.16 ENSMUST00000140399.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1688;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 GT ENSMUSG00000031393.16 ENSMUST00000140399.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1688;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 - ENSMUSG00000031393.16 ENSMUST00000170481.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 GT ENSMUSG00000031393.16 ENSMUST00000170481.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 - ENSMUSG00000031393.16 ENSMUST00000198358.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1701;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74087298_GTGT/-/GT chrX:74087298-74087301 GT ENSMUSG00000031393.16 ENSMUST00000198358.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1701;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_74609900_ACAC/- chrX:74609900-74609903 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_74827338_TT/- chrX:74827338-74827339 - ENSMUSG00000081612.1 ENSMUST00000122043.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000033776.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000131155.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000131867.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1993;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000132000.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2053;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000135389.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2143;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000140609.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000145222.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2121;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000151327.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000153844.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000154422.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=8;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000031403.14 ENSMUST00000154936.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75100940_C/G chrX:75100940 G ENSMUSG00000089014.1 ENSMUST00000158389.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=469;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75248184_C/- chrX:75248184 - ENSMUSG00000031196.13 ENSMUST00000033539.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75248184_C/- chrX:75248184 - ENSMUSG00000031196.13 ENSMUST00000114085.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75248187_CC/- chrX:75248187-75248188 - ENSMUSG00000031196.13 ENSMUST00000033539.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75248187_CC/- chrX:75248187-75248188 - ENSMUSG00000031196.13 ENSMUST00000114085.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750317_C/T chrX:75750317 T ENSMUSG00000087396.7 ENSMUST00000129980.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750317_C/T chrX:75750317 T ENSMUSG00000087396.7 ENSMUST00000130744.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750317_C/T chrX:75750317 T ENSMUSG00000087396.7 ENSMUST00000138943.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750317_C/T chrX:75750317 T ENSMUSG00000087396.7 ENSMUST00000140409.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750340_C/A chrX:75750340 A ENSMUSG00000087396.7 ENSMUST00000129980.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750340_C/A chrX:75750340 A ENSMUSG00000087396.7 ENSMUST00000130744.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750340_C/A chrX:75750340 A ENSMUSG00000087396.7 ENSMUST00000138943.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75750340_C/A chrX:75750340 A ENSMUSG00000087396.7 ENSMUST00000140409.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75759428_GTGT/- chrX:75759428-75759431 - ENSMUSG00000087396.7 ENSMUST00000129980.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3827;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75759428_GTGT/- chrX:75759428-75759431 - ENSMUSG00000087396.7 ENSMUST00000130744.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75759428_GTGT/- chrX:75759428-75759431 - ENSMUSG00000087396.7 ENSMUST00000138943.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75759428_GTGT/- chrX:75759428-75759431 - ENSMUSG00000087396.7 ENSMUST00000140409.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3828;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 - ENSMUSG00000016382.15 ENSMUST00000033547.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 TG ENSMUSG00000016382.15 ENSMUST00000033547.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 - ENSMUSG00000016382.15 ENSMUST00000114057.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 TG ENSMUSG00000016382.15 ENSMUST00000114057.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 - ENSMUSG00000016382.15 ENSMUST00000114058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 TG ENSMUSG00000016382.15 ENSMUST00000114058.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 - ENSMUSG00000016382.15 ENSMUST00000114059.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 TG ENSMUSG00000016382.15 ENSMUST00000114059.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 - ENSMUSG00000016382.15 ENSMUST00000137192.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_75793801_TGTG/-/TG chrX:75793801-75793804 TG ENSMUSG00000016382.15 ENSMUST00000137192.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_76430907_C/- chrX:76430907 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_76661365_-/GAAGAA chrX:76661364-76661365 GAAGAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_76767606_-/G chrX:76767605-76767606 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_76840599_C/G chrX:76840599 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_77290181_TTT/-/TTTT chrX:77290181-77290183 - ENSMUSG00000082517.1 ENSMUST00000117494.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2478;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_77290181_TTT/-/TTTT chrX:77290181-77290183 TTTT ENSMUSG00000082517.1 ENSMUST00000117494.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2478;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_77290181_TTT/-/TTTT chrX:77290181-77290183 - ENSMUSG00000084202.1 ENSMUST00000121933.1 Transcript non_coding_transcript_exon_variant 633-635 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_77290181_TTT/-/TTTT chrX:77290181-77290183 TTTT ENSMUSG00000084202.1 ENSMUST00000121933.1 Transcript non_coding_transcript_exon_variant 633-635 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_77478163_ACAC/- chrX:77478163-77478166 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_77526936_TT/- chrX:77526936-77526937 - ENSMUSG00000025246.13 ENSMUST00000088217.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_77526936_TT/- chrX:77526936-77526937 - ENSMUSG00000025246.13 ENSMUST00000133893.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_77872225_G/A/GTA chrX:77872225 A ENSMUSG00000079522.2 ENSMUST00000114039.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2192;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_77872225_G/A/GTA chrX:77872225 GTA ENSMUSG00000079522.2 ENSMUST00000114039.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2192;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_79194192_-/A chrX:79194191-79194192 A ENSMUSG00000081049.1 ENSMUST00000118723.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=855;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_79695276_ACAC/-/AC chrX:79695276-79695279 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_79695276_ACAC/-/AC chrX:79695276-79695279 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_79786119_-/G chrX:79786118-79786119 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80059953_ACAC/- chrX:80059953-80059956 - ENSMUSG00000080847.1 ENSMUST00000120392.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1055;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_80221694_C/T chrX:80221694 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80585282_G/T chrX:80585282 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80596347_G/T chrX:80596347 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80811840_GTGT/-/GTGTGT chrX:80811840-80811843 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80811840_GTGT/-/GTGTGT chrX:80811840-80811843 GTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80890156_G/A chrX:80890156 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80966725_T/C chrX:80966725 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_80978316_C/T chrX:80978316 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_82654964_T/G chrX:82654964 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 - ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 T ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 TT ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 TTTT ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 - ENSMUSG00000045103.17 ENSMUST00000127295.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 T ENSMUSG00000045103.17 ENSMUST00000127295.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 TT ENSMUSG00000045103.17 ENSMUST00000127295.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 TTTT ENSMUSG00000045103.17 ENSMUST00000127295.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 - ENSMUSG00000045103.17 ENSMUST00000147740.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 T ENSMUSG00000045103.17 ENSMUST00000147740.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 TT ENSMUSG00000045103.17 ENSMUST00000147740.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83080949_TTT/-/T/TT/TTTT chrX:83080949-83080951 TTTT ENSMUSG00000045103.17 ENSMUST00000147740.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83512559_ATATATAT/- chrX:83512559-83512566 - ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83512559_ATATATAT/- chrX:83512559-83512566 - ENSMUSG00000045103.17 ENSMUST00000147740.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83929569_-/A chrX:83929568-83929569 A ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_83929569_-/A chrX:83929568-83929569 A ENSMUSG00000045103.17 ENSMUST00000141261.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=667;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84099832_TT/- chrX:84099832-84099833 - ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84099832_TT/- chrX:84099832-84099833 - ENSMUSG00000045103.17 ENSMUST00000139998.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84312007_C/T chrX:84312007 T ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84312007_C/T chrX:84312007 T ENSMUSG00000045103.17 ENSMUST00000139998.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2113;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84538279_ACAC/-/AC chrX:84538279-84538282 - ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84538279_ACAC/-/AC chrX:84538279-84538282 AC ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84737715_G/A chrX:84737715 A ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84737715_G/A chrX:84737715 A ENSMUSG00000045103.17 ENSMUST00000146331.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84945313_-/TAGA chrX:84945312-84945313 TAGA ENSMUSG00000045103.17 ENSMUST00000114000.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84945313_-/TAGA chrX:84945312-84945313 TAGA ENSMUSG00000045103.17 ENSMUST00000146331.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_84945313_-/TAGA chrX:84945312-84945313 TAGA ENSMUSG00000045103.17 ENSMUST00000156107.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_85391601_GTGT/-/GTGTGT chrX:85391601-85391604 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_85391601_GTGT/-/GTGTGT chrX:85391601-85391604 GTGTGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_85650151_ACAC/-/AC chrX:85650151-85650154 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_85650151_ACAC/-/AC chrX:85650151-85650154 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_85806882_TGTG/-/TG chrX:85806882-85806885 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_85806882_TGTG/-/TG chrX:85806882-85806885 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_86036031_TG/- chrX:86036031-86036032 - ENSMUSG00000080266.2 ENSMUST00000116562.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2862;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_86188653_C/A chrX:86188653 A ENSMUSG00000025056.4 ENSMUST00000026036.4 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3111;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87084604_G/C chrX:87084604 C ENSMUSG00000052372.10 ENSMUST00000078875.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87084604_G/C chrX:87084604 C ENSMUSG00000052372.10 ENSMUST00000113964.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87084604_G/C chrX:87084604 C ENSMUSG00000052372.10 ENSMUST00000113966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87084630_A/G chrX:87084630 G ENSMUSG00000052372.10 ENSMUST00000078875.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87084630_A/G chrX:87084630 G ENSMUSG00000052372.10 ENSMUST00000113964.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87084630_A/G chrX:87084630 G ENSMUSG00000052372.10 ENSMUST00000113966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87709423_CACA/-/CA chrX:87709423-87709426 - ENSMUSG00000052372.10 ENSMUST00000078875.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87709423_CACA/-/CA chrX:87709423-87709426 CA ENSMUSG00000052372.10 ENSMUST00000078875.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87709423_CACA/-/CA chrX:87709423-87709426 - ENSMUSG00000052372.10 ENSMUST00000113964.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87709423_CACA/-/CA chrX:87709423-87709426 CA ENSMUSG00000052372.10 ENSMUST00000113964.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87709423_CACA/-/CA chrX:87709423-87709426 - ENSMUSG00000052372.10 ENSMUST00000113966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_87709423_CACA/-/CA chrX:87709423-87709426 CA ENSMUSG00000052372.10 ENSMUST00000113966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_88114817_CACA/-/CA chrX:88114817-88114820 - ENSMUSG00000052372.10 ENSMUST00000113964.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_88114817_CACA/-/CA chrX:88114817-88114820 CA ENSMUSG00000052372.10 ENSMUST00000113964.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_88114817_CACA/-/CA chrX:88114817-88114820 - ENSMUSG00000052372.10 ENSMUST00000113966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_88114817_CACA/-/CA chrX:88114817-88114820 CA ENSMUSG00000052372.10 ENSMUST00000113966.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_88697679_AGAG/- chrX:88697679-88697682 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_89977455_T/A chrX:89977455 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_90330079_G/C chrX:90330079 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_90388893_A/G chrX:90388893 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_90775208_-/A chrX:90775207-90775208 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_91210166_T/- chrX:91210166 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_91540637_AA/- chrX:91540637-91540638 - ENSMUSG00000080863.1 ENSMUST00000121236.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4200;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_92019626_G/T chrX:92019626 T ENSMUSG00000062162.2 ENSMUST00000072269.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3293;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_92019626_G/T chrX:92019626 T ENSMUSG00000062162.2 ENSMUST00000099471.2 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3443;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_92023001_T/A chrX:92023001 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_92023011_G/A chrX:92023011 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_92909035_A/G chrX:92909035 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_93404051_AA/- chrX:93404051-93404052 - ENSMUSG00000006678.6 ENSMUST00000006856.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94085778_C/G chrX:94085778 G ENSMUSG00000079509.10 ENSMUST00000088102.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94085778_C/G chrX:94085778 G ENSMUSG00000079509.10 ENSMUST00000113926.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94085778_C/G chrX:94085778 G ENSMUSG00000079509.10 ENSMUST00000113927.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94085778_C/G chrX:94085778 G ENSMUSG00000079509.10 ENSMUST00000137853.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94085778_C/G chrX:94085778 G ENSMUSG00000087640.1 ENSMUST00000139695.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94187402_-/TTT chrX:94187401-94187402 TTT ENSMUSG00000035150.15 ENSMUST00000050328.14 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1305;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94310778_T/C chrX:94310778 C ENSMUSG00000080923.1 ENSMUST00000118494.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1116;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94618482_GTGT/-/GT chrX:94618482-94618485 - ENSMUSG00000080974.2 ENSMUST00000117321.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2357;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94618482_GTGT/-/GT chrX:94618482-94618485 GT ENSMUSG00000080974.2 ENSMUST00000117321.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2357;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_94900922_C/G chrX:94900922 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_94903806_T/- chrX:94903806 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_94973574_C/G chrX:94973574 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_95005023_G/A/GA chrX:95005023 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_95005023_G/A/GA chrX:95005023 GA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000113873.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000113876.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000113878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000113882.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000113883.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000113884.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000113885.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000128565.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000181987.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000182001.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000197206.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000197364.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000198753.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000199920.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95089478_T/C chrX:95089478 C ENSMUSG00000025656.17 ENSMUST00000200628.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000113873.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000113876.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000113878.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000113882.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000113883.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000113884.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000113885.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000128565.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000181987.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000182001.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000182562.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000196012.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000197206.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000197364.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000198753.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000199920.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95136239_AA/- chrX:95136239-95136240 - ENSMUSG00000025656.17 ENSMUST00000200628.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95333590_A/G chrX:95333590 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_95869537_ATAT/-/ATATAT chrX:95869537-95869540 - ENSMUSG00000035045.17 ENSMUST00000150123.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_95869537_ATAT/-/ATATAT chrX:95869537-95869540 ATATAT ENSMUSG00000035045.17 ENSMUST00000150123.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325280_C/T chrX:96325280 T ENSMUSG00000045802.13 ENSMUST00000059003.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325280_C/T chrX:96325280 T ENSMUSG00000045802.13 ENSMUST00000119035.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325280_C/T chrX:96325280 T ENSMUSG00000045802.13 ENSMUST00000146965.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325280_C/T chrX:96325280 T ENSMUSG00000045802.13 ENSMUST00000164693.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325280_C/T chrX:96325280 T ENSMUSG00000045802.13 ENSMUST00000179832.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325290_C/T chrX:96325290 T ENSMUSG00000045802.13 ENSMUST00000059003.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325290_C/T chrX:96325290 T ENSMUSG00000045802.13 ENSMUST00000119035.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325290_C/T chrX:96325290 T ENSMUSG00000045802.13 ENSMUST00000146965.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325290_C/T chrX:96325290 T ENSMUSG00000045802.13 ENSMUST00000164693.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96325290_C/T chrX:96325290 T ENSMUSG00000045802.13 ENSMUST00000179832.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96451557_ACAC/- chrX:96451557-96451560 - ENSMUSG00000031209.14 ENSMUST00000033553.13 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3799;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96451557_ACAC/- chrX:96451557-96451560 - ENSMUSG00000031209.14 ENSMUST00000079322.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4813;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96451557_ACAC/- chrX:96451557-96451560 - ENSMUSG00000031209.14 ENSMUST00000113838.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4830;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96451557_ACAC/- chrX:96451557-96451560 - ENSMUSG00000045802.13 ENSMUST00000119035.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96451557_ACAC/- chrX:96451557-96451560 - ENSMUSG00000031209.14 ENSMUST00000135212.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4868;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96451557_ACAC/- chrX:96451557-96451560 - ENSMUSG00000031209.14 ENSMUST00000154413.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4868;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96451557_ACAC/- chrX:96451557-96451560 - ENSMUSG00000045802.13 ENSMUST00000164693.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465384_A/C chrX:96465384 C ENSMUSG00000031209.14 ENSMUST00000033553.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465384_A/C chrX:96465384 C ENSMUSG00000031209.14 ENSMUST00000079322.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465384_A/C chrX:96465384 C ENSMUSG00000031209.14 ENSMUST00000113838.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465384_A/C chrX:96465384 C ENSMUSG00000031209.14 ENSMUST00000135212.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465384_A/C chrX:96465384 C ENSMUSG00000031209.14 ENSMUST00000154413.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465386_TT/- chrX:96465386-96465387 - ENSMUSG00000031209.14 ENSMUST00000033553.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465386_TT/- chrX:96465386-96465387 - ENSMUSG00000031209.14 ENSMUST00000079322.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465386_TT/- chrX:96465386-96465387 - ENSMUSG00000031209.14 ENSMUST00000113838.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465386_TT/- chrX:96465386-96465387 - ENSMUSG00000031209.14 ENSMUST00000135212.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_96465386_TT/- chrX:96465386-96465387 - ENSMUSG00000031209.14 ENSMUST00000154413.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 A ENSMUSG00000034457.10 ENSMUST00000037353.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 CTC ENSMUSG00000034457.10 ENSMUST00000037353.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 A ENSMUSG00000034457.10 ENSMUST00000113832.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 CTC ENSMUSG00000034457.10 ENSMUST00000113832.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 A ENSMUSG00000034457.10 ENSMUST00000126283.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 CTC ENSMUSG00000034457.10 ENSMUST00000126283.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 A ENSMUSG00000034457.10 ENSMUST00000126609.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97357530_ATC/A/CTC chrX:97357530-97357532 CTC ENSMUSG00000034457.10 ENSMUST00000126609.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_97690425_CA/C/AA chrX:97690425-97690426 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_97690425_CA/C/AA chrX:97690425-97690426 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_97780172_C/T chrX:97780172 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_97796291_T/- chrX:97796291 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_97907992_C/T chrX:97907992 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_97908036_G/A chrX:97908036 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_98026325_TATAAT/- chrX:98026325-98026330 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_99658855_-/A chrX:99658854-99658855 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_99921726_AA/- chrX:99921726-99921727 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000071453.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113775.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113776.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113777.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113778.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113779.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113780.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113781.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000113783.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100177719_G/A chrX:100177719 A ENSMUSG00000059327.9 ENSMUST00000134582.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000031220.14 ENSMUST00000033567.14 Transcript splice_donor_variant - - - - - - IMPACT=HIGH;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000059327.9 ENSMUST00000113775.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3369;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000059327.9 ENSMUST00000113776.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3369;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000059327.9 ENSMUST00000113778.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3367;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000059327.9 ENSMUST00000113779.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3369;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000059327.9 ENSMUST00000113780.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3367;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000059327.9 ENSMUST00000113781.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3370;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000059327.9 ENSMUST00000113783.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3370;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100404129_A/T chrX:100404129 T ENSMUSG00000031220.14 ENSMUST00000147103.1 Transcript splice_donor_variant - - - - - - IMPACT=HIGH;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100477487_-/AA chrX:100477486-100477487 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_100645500_C/G chrX:100645500 G ENSMUSG00000034311.3 ENSMUST00000048962.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100765399_G/A chrX:100765399 A ENSMUSG00000000881.12 ENSMUST00000000901.12 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2323;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100765399_G/A chrX:100765399 A ENSMUSG00000000881.12 ENSMUST00000087984.10 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2350;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100765399_G/A chrX:100765399 A ENSMUSG00000000881.12 ENSMUST00000113736.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2324;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100765399_G/A chrX:100765399 A ENSMUSG00000000881.12 ENSMUST00000147863.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2596;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100955056_GAGA/- chrX:100955056-100955059 - ENSMUSG00000009670.11 ENSMUST00000009814.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100955056_GAGA/- chrX:100955056-100955059 - ENSMUSG00000009670.11 ENSMUST00000113716.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_100955056_GAGA/- chrX:100955056-100955059 - ENSMUSG00000009670.11 ENSMUST00000113718.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101010753_-/AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA chrX:101010752-101010753 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA ENSMUSG00000009670.11 ENSMUST00000009814.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101010753_-/AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA chrX:101010752-101010753 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA ENSMUSG00000009670.11 ENSMUST00000113716.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101010753_-/AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA chrX:101010752-101010753 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA ENSMUSG00000009670.11 ENSMUST00000113718.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101010753_-/AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA chrX:101010752-101010753 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA ENSMUSG00000088839.2 ENSMUST00000158214.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4793;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101010753_-/AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA chrX:101010752-101010753 AAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAA ENSMUSG00000089205.1 ENSMUST00000158580.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4869;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101181006_G/T chrX:101181006 T ENSMUSG00000046032.16 ENSMUST00000156473.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101529503_C/A chrX:101529503 A ENSMUSG00000031314.18 ENSMUST00000101341.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3238;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101529503_C/A chrX:101529503 A ENSMUSG00000031314.18 ENSMUST00000118878.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3231;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101529503_C/A chrX:101529503 A ENSMUSG00000031314.18 ENSMUST00000143908.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3256;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101529503_C/A chrX:101529503 A ENSMUSG00000031314.18 ENSMUST00000149274.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3256;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_101630323_TT/- chrX:101630323-101630324 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_101699680_G/C chrX:101699680 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_102560789_A/G chrX:102560789 G ENSMUSG00000034055.16 ENSMUST00000043596.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102560789_A/G chrX:102560789 G ENSMUSG00000034055.16 ENSMUST00000052012.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102560789_A/G chrX:102560789 G ENSMUSG00000034055.16 ENSMUST00000113611.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102560789_A/G chrX:102560789 G ENSMUSG00000034055.16 ENSMUST00000119229.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102560789_A/G chrX:102560789 G ENSMUSG00000034055.16 ENSMUST00000120270.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102560789_A/G chrX:102560789 G ENSMUSG00000034055.16 ENSMUST00000122022.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102560789_A/G chrX:102560789 G ENSMUSG00000034055.16 ENSMUST00000142534.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102724856_-/T chrX:102724855-102724856 T ENSMUSG00000080845.1 ENSMUST00000120192.1 Transcript non_coding_transcript_exon_variant 894-895 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102728622_TCTC/-/TC chrX:102728622-102728625 - ENSMUSG00000080845.1 ENSMUST00000120192.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2873;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_102728622_TCTC/-/TC chrX:102728622-102728625 TC ENSMUSG00000080845.1 ENSMUST00000120192.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2873;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000065509.3 ENSMUST00000083575.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4616;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000065509.3 ENSMUST00000083575.3 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4616;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000076269.1 ENSMUST00000102314.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000076269.1 ENSMUST00000102314.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4458;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000086370.8 ENSMUST00000130063.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000086370.8 ENSMUST00000130063.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000086370.8 ENSMUST00000145803.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000086370.8 ENSMUST00000145803.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000086370.8 ENSMUST00000156211.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000086370.8 ENSMUST00000156211.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000086370.8 ENSMUST00000156240.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000086370.8 ENSMUST00000156240.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000103697.1 ENSMUST00000193066.1 Transcript non_coding_transcript_exon_variant 3489-3490 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000103697.1 ENSMUST00000193066.1 Transcript non_coding_transcript_exon_variant 3489-3490 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 - ENSMUSG00000106465.1 ENSMUST00000197862.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4479;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103577612_TT/-/T chrX:103577612-103577613 T ENSMUSG00000106465.1 ENSMUST00000197862.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4479;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103717263_CACA/-/CA chrX:103717263-103717266 - ENSMUSG00000033965.10 ENSMUST00000042664.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103717263_CACA/-/CA chrX:103717263-103717266 CA ENSMUSG00000033965.10 ENSMUST00000042664.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103717263_CACA/-/CA chrX:103717263-103717266 - ENSMUSG00000033965.10 ENSMUST00000148684.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103717263_CACA/-/CA chrX:103717263-103717266 CA ENSMUSG00000033965.10 ENSMUST00000148684.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103972021_A/- chrX:103972021 - ENSMUSG00000056537.11 ENSMUST00000070705.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_103972021_A/- chrX:103972021 - ENSMUSG00000056537.11 ENSMUST00000121153.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_104333421_ACAC/-/AC chrX:104333421-104333424 - ENSMUSG00000031333.7 ENSMUST00000033695.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_104333421_ACAC/-/AC chrX:104333421-104333424 AC ENSMUSG00000031333.7 ENSMUST00000033695.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_104959727_G/A chrX:104959727 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000123850.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=552;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000127409.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=621;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000127533.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=560;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000135114.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=569;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000136211.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4589;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000138460.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=532;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000140954.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=532;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000141136.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=562;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000144366.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=601;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000144774.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4369;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000144849.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000146227.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=548;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000147478.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=613;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000154334.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=614;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105070657_-/T chrX:105070656-105070657 T ENSMUSG00000087174.7 ENSMUST00000156974.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=610;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105467687_TT/- chrX:105467687-105467688 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_105503732_-/A chrX:105503731-105503732 A ENSMUSG00000090132.2 ENSMUST00000041758.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3092;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_105603803_TGTG/- chrX:105603803-105603806 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_106785319_TGT/CCC chrX:106785319-106785321 CCC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_107069452_T/-/TT chrX:107069452 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_107069452_T/-/TT chrX:107069452 TT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_107319725_T/C chrX:107319725 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_107602058_G/A chrX:107602058 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_107655993_TT/- chrX:107655993-107655994 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_107692340_ACCCACCCACCCA/- chrX:107692340-107692352 - ENSMUSG00000031241.17 ENSMUST00000068451.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3362;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_107692340_ACCCACCCACCCA/- chrX:107692340-107692352 - ENSMUSG00000031241.17 ENSMUST00000168174.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3365;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_107692340_ACCCACCCACCCA/- chrX:107692340-107692352 - ENSMUSG00000031241.17 ENSMUST00000168403.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4718;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_107692356_A/C chrX:107692356 C ENSMUSG00000031241.17 ENSMUST00000068451.11 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3378;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_107692356_A/C chrX:107692356 C ENSMUSG00000031241.17 ENSMUST00000168174.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3381;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_107692356_A/C chrX:107692356 C ENSMUSG00000031241.17 ENSMUST00000168403.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4734;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_107770785_T/C chrX:107770785 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_108101247_G/A chrX:108101247 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_108625331_T/A chrX:108625331 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_108895850_T/- chrX:108895850 - ENSMUSG00000081748.1 ENSMUST00000118414.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2199;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_108895850_T/- chrX:108895850 - ENSMUSG00000086629.8 ENSMUST00000123040.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_108895850_T/- chrX:108895850 - ENSMUSG00000086629.8 ENSMUST00000207966.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_110337904_AA/- chrX:110337904-110337905 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_110564882_AA/-/A chrX:110564882-110564883 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_110564882_AA/-/A chrX:110564882-110564883 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_111058628_T/C chrX:111058628 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_111171046_GTA/- chrX:111171046-111171048 - ENSMUSG00000062226.4 ENSMUST00000075226.4 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2353;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_111693315_CACA/- chrX:111693315-111693318 - ENSMUSG00000034551.12 ENSMUST00000038472.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_111693315_CACA/- chrX:111693315-111693318 - ENSMUSG00000034551.12 ENSMUST00000113422.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_111897773_TTT/- chrX:111897773-111897775 - ENSMUSG00000109156.1 ENSMUST00000207546.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=759;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_111897773_TTT/- chrX:111897773-111897775 - ENSMUSG00000109156.1 ENSMUST00000207962.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_112474993_AAA/-/AA/AAAA chrX:112474993-112474995 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_112474993_AAA/-/AA/AAAA chrX:112474993-112474995 AA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_112474993_AAA/-/AA/AAAA chrX:112474993-112474995 AAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_112882313_TT/- chrX:112882313-112882314 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_113205310_TTCC/- chrX:113205310-113205313 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_113692480_TT/- chrX:113692480-113692481 - ENSMUSG00000025592.17 ENSMUST00000067219.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_113692480_TT/- chrX:113692480-113692481 - ENSMUSG00000025592.17 ENSMUST00000113378.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_113692480_TT/- chrX:113692480-113692481 - ENSMUSG00000025592.17 ENSMUST00000113379.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_113692480_TT/- chrX:113692480-113692481 - ENSMUSG00000025592.17 ENSMUST00000113380.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_113692480_TT/- chrX:113692480-113692481 - ENSMUSG00000025592.17 ENSMUST00000113382.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_113692480_TT/- chrX:113692480-113692481 - ENSMUSG00000025592.17 ENSMUST00000146539.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_114097783_AA/- chrX:114097783-114097784 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_114140297_C/T chrX:114140297 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_114594266_AGAG/- chrX:114594266-114594269 - ENSMUSG00000082070.1 ENSMUST00000120701.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1742;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_115127160_G/T chrX:115127160 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_115449229_-/T chrX:115449228-115449229 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_115581281_-/CACA chrX:115581280-115581281 CACA ENSMUSG00000083663.1 ENSMUST00000122435.1 Transcript non_coding_transcript_exon_variant 232-233 - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_115657933_TT/-/T chrX:115657933-115657934 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_115657933_TT/-/T chrX:115657933-115657934 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_116205108_A/T chrX:116205108 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_116225235_A/C chrX:116225235 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_116785739_C/A chrX:116785739 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_117301011_TT/-/TTT chrX:117301011-117301012 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_117301011_TT/-/TTT chrX:117301011-117301012 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_117542628_-/ATAG chrX:117542627-117542628 ATAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_117875724_TATA/- chrX:117875724-117875727 - ENSMUSG00000081659.1 ENSMUST00000118872.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3084;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_118435134_G/A chrX:118435134 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_119005730_AGAGAGAG/-/AGAGAG/AGAGAGAGAG chrX:119005730-119005737 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_119005730_AGAGAGAG/-/AGAGAG/AGAGAGAGAG chrX:119005730-119005737 AGAGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_119005730_AGAGAGAG/-/AGAGAG/AGAGAGAGAG chrX:119005730-119005737 AGAGAGAGAG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_119533837_AA/-/AAA chrX:119533837-119533838 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_119533837_AA/-/AAA chrX:119533837-119533838 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_119949150_CCT/- chrX:119949150-119949152 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_120060365_TGTG/- chrX:120060365-120060368 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_120231205_AAA/- chrX:120231205-120231207 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_120865666_-/T chrX:120865665-120865666 T ENSMUSG00000034755.18 ENSMUST00000050239.15 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_120865666_-/T chrX:120865665-120865666 T ENSMUSG00000034755.18 ENSMUST00000113358.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_120865666_-/T chrX:120865665-120865666 T ENSMUSG00000034755.18 ENSMUST00000113364.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_120865666_-/T chrX:120865665-120865666 T ENSMUSG00000034755.18 ENSMUST00000155223.6 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_120865666_-/T chrX:120865665-120865666 T ENSMUSG00000034755.18 ENSMUST00000191653.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_120865666_-/T chrX:120865665-120865666 T ENSMUSG00000034755.18 ENSMUST00000192677.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_120865666_-/T chrX:120865665-120865666 T ENSMUSG00000034755.18 ENSMUST00000195088.5 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_121935409_T/A chrX:121935409 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_122806035_A/- chrX:122806035 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_122875784_AA/- chrX:122875784-122875785 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_122908664_ACAC/- chrX:122908664-122908667 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_123020037_GA/TC chrX:123020037-123020038 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_123068393_A/T chrX:123068393 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_123074241_T/G chrX:123074241 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_123148631_A/C chrX:123148631 C ENSMUSG00000079450.11 ENSMUST00000113343.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2980;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123148631_A/C chrX:123148631 C ENSMUSG00000079450.11 ENSMUST00000113348.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2977;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123148631_A/C chrX:123148631 C ENSMUSG00000079450.11 ENSMUST00000149445.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123148631_A/C chrX:123148631 C ENSMUSG00000079450.11 ENSMUST00000153946.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1644;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123148637_GAGGTA/- chrX:123148637-123148642 - ENSMUSG00000079450.11 ENSMUST00000113343.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2986;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123148637_GAGGTA/- chrX:123148637-123148642 - ENSMUSG00000079450.11 ENSMUST00000113348.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2983;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123148637_GAGGTA/- chrX:123148637-123148642 - ENSMUSG00000079450.11 ENSMUST00000149445.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123148637_GAGGTA/- chrX:123148637-123148642 - ENSMUSG00000079450.11 ENSMUST00000153946.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1650;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123182971_AA/- chrX:123182971-123182972 - ENSMUSG00000079450.11 ENSMUST00000149445.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_123342077_A/G chrX:123342077 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_123374811_-/CACCCAA chrX:123374810-123374811 CACCCAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_123374812_-/ATTT chrX:123374811-123374812 ATTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_123918988_A/C chrX:123918988 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_124128584_G/A chrX:124128584 A ENSMUSG00000072049.6 ENSMUST00000094491.4 Transcript missense_variant 1859 1738 580 P/S Cca/Tca - IMPACT=MODERATE;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_124128584_G/A chrX:124128584 A ENSMUSG00000072049.6 ENSMUST00000233359.1 Transcript 3_prime_UTR_variant,NMD_transcript_variant 1576 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_124128584_G/A chrX:124128584 A ENSMUSG00000072049.6 ENSMUST00000233504.1 Transcript 3_prime_UTR_variant,NMD_transcript_variant 2015 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_124227891_AAA/- chrX:124227891-124227893 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_124231892_A/G chrX:124231892 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_126030263_G/A chrX:126030263 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_126543760_A/T chrX:126543760 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_126693471_AA/- chrX:126693471-126693472 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_126693492_T/C chrX:126693492 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_126774881_C/T chrX:126774881 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_127130906_G/A chrX:127130906 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_127549986_C/T chrX:127549986 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_127623844_ATAT/- chrX:127623844-127623847 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_127736312_ATAT/-/AT chrX:127736312-127736315 - ENSMUSG00000043569.7 ENSMUST00000052500.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_127736312_ATAT/-/AT chrX:127736312-127736315 AT ENSMUSG00000043569.7 ENSMUST00000052500.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_128156133_AA/-/A chrX:128156133-128156134 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_128156133_AA/-/A chrX:128156133-128156134 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_128160650_T/C chrX:128160650 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_128393545_T/- chrX:128393545 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_128602353_T/C chrX:128602353 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_128721914_GTGT/-/GT chrX:128721914-128721917 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_128721914_GTGT/-/GT chrX:128721914-128721917 GT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_129569184_T/C chrX:129569184 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_129683669_AGAT/- chrX:129683669-129683672 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_129839324_TA/CC chrX:129839324-129839325 CC ENSMUSG00000034480.18 ENSMUST00000037854.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129839324_TA/CC chrX:129839324-129839325 CC ENSMUSG00000034480.18 ENSMUST00000113320.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129839324_TA/CC chrX:129839324-129839325 CC ENSMUSG00000034480.18 ENSMUST00000127577.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129839324_TA/CC chrX:129839324-129839325 CC ENSMUSG00000034480.18 ENSMUST00000143668.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129839324_TA/CC chrX:129839324-129839325 CC ENSMUSG00000034480.18 ENSMUST00000155333.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129839324_TA/CC chrX:129839324-129839325 CC ENSMUSG00000034480.18 ENSMUST00000167619.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129910332_C/T chrX:129910332 T ENSMUSG00000034480.18 ENSMUST00000037854.14 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129910332_C/T chrX:129910332 T ENSMUSG00000034480.18 ENSMUST00000113320.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129910332_C/T chrX:129910332 T ENSMUSG00000034480.18 ENSMUST00000127577.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129910332_C/T chrX:129910332 T ENSMUSG00000034480.18 ENSMUST00000143668.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129910332_C/T chrX:129910332 T ENSMUSG00000034480.18 ENSMUST00000155333.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_129910332_C/T chrX:129910332 T ENSMUSG00000034480.18 ENSMUST00000167619.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_131367798_C/T chrX:131367798 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_131382499_G/- chrX:131382499 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_131505266_AA/-/AAA chrX:131505266-131505267 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_131505266_AA/-/AAA chrX:131505266-131505267 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_131801282_-/TATT chrX:131801281-131801282 TATT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_132021968_T/G chrX:132021968 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_132199597_TT/-/T/TTT chrX:132199597-132199598 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_132199597_TT/-/T/TTT chrX:132199597-132199598 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_132199597_TT/-/T/TTT chrX:132199597-132199598 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_132378907_A/T chrX:132378907 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_132378909_A/T chrX:132378909 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_133345906_G/A chrX:133345906 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_133439046_G/T/GTTT chrX:133439046 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_133439046_G/T/GTTT chrX:133439046 GTTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_133896993_GGG/- chrX:133896993-133896995 - ENSMUSG00000067377.12 ENSMUST00000087557.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896993_GGG/- chrX:133896993-133896995 - ENSMUSG00000084875.2 ENSMUST00000130431.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1704;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896993_GGG/- chrX:133896993-133896995 - ENSMUSG00000067377.12 ENSMUST00000176641.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896993_GGG/- chrX:133896993-133896995 - ENSMUSG00000067377.12 ENSMUST00000176718.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896993_GGG/- chrX:133896993-133896995 - ENSMUSG00000067377.12 ENSMUST00000177468.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896997_A/T chrX:133896997 T ENSMUSG00000067377.12 ENSMUST00000087557.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896997_A/T chrX:133896997 T ENSMUSG00000084875.2 ENSMUST00000130431.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1702;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896997_A/T chrX:133896997 T ENSMUSG00000067377.12 ENSMUST00000176641.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896997_A/T chrX:133896997 T ENSMUSG00000067377.12 ENSMUST00000176718.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133896997_A/T chrX:133896997 T ENSMUSG00000067377.12 ENSMUST00000177468.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_133991015_TCTC/-/TC chrX:133991015-133991018 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_133991015_TCTC/-/TC chrX:133991015-133991018 TC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_135056312_A/G chrX:135056312 G ENSMUSG00000089759.7 ENSMUST00000142907.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_135056316_A/G chrX:135056316 G ENSMUSG00000089759.7 ENSMUST00000142907.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_135316185_T/C chrX:135316185 C ENSMUSG00000067360.12 ENSMUST00000113176.2 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3549;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_135316185_T/C chrX:135316185 C ENSMUSG00000067360.12 ENSMUST00000118821.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3533;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_135316185_T/C chrX:135316185 C ENSMUSG00000094470.1 ENSMUST00000179952.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1756;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_135858206_AGAG/-/AG chrX:135858206-135858209 - ENSMUSG00000072964.14 ENSMUST00000207433.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_135858206_AGAG/-/AG chrX:135858206-135858209 AG ENSMUSG00000072964.14 ENSMUST00000207433.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136694158_AA/- chrX:136694158-136694159 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_136841130_TGTG/-/TG/TGTGTGTG chrX:136841130-136841133 - ENSMUSG00000031425.15 ENSMUST00000033800.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1397;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136841130_TGTG/-/TG/TGTGTGTG chrX:136841130-136841133 TG ENSMUSG00000031425.15 ENSMUST00000033800.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1397;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136841130_TGTG/-/TG/TGTGTGTG chrX:136841130-136841133 TGTGTGTG ENSMUSG00000031425.15 ENSMUST00000033800.12 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1397;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136841130_TGTG/-/TG/TGTGTGTG chrX:136841130-136841133 - ENSMUSG00000031425.15 ENSMUST00000113085.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3332;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136841130_TGTG/-/TG/TGTGTGTG chrX:136841130-136841133 TG ENSMUSG00000031425.15 ENSMUST00000113085.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3332;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136841130_TGTG/-/TG/TGTGTGTG chrX:136841130-136841133 TGTGTGTG ENSMUSG00000031425.15 ENSMUST00000113085.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3332;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136890971_AA/-/AAAA chrX:136890971-136890972 - ENSMUSG00000082563.1 ENSMUST00000119219.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=256;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_136890971_AA/-/AAAA chrX:136890971-136890972 AAAA ENSMUSG00000082563.1 ENSMUST00000119219.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=256;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_137054871_T/C chrX:137054871 C ENSMUSG00000042595.7 ENSMUST00000047852.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_137068481_A/G chrX:137068481 G ENSMUSG00000042595.7 ENSMUST00000047852.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_137169481_A/T chrX:137169481 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_137333472_ACACAC/-/ACACACAC chrX:137333472-137333477 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_137333472_ACACAC/-/ACACACAC chrX:137333472-137333477 ACACACAC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_137392245_CAA/C/AAA chrX:137392245-137392247 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_137392245_CAA/C/AAA chrX:137392245-137392247 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_137557906_AA/- chrX:137557906-137557907 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_138399141_TTTT/-/TTT chrX:138399141-138399144 - ENSMUSG00000059203.10 ENSMUST00000075471.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_138399141_TTTT/-/TTT chrX:138399141-138399144 TTT ENSMUSG00000059203.10 ENSMUST00000075471.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_138399141_TTTT/-/TTT chrX:138399141-138399144 - ENSMUSG00000059203.10 ENSMUST00000113063.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_138399141_TTTT/-/TTT chrX:138399141-138399144 TTT ENSMUSG00000059203.10 ENSMUST00000113063.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_138399141_TTTT/-/TTT chrX:138399141-138399144 - ENSMUSG00000059203.10 ENSMUST00000130879.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_138399141_TTTT/-/TTT chrX:138399141-138399144 TTT ENSMUSG00000059203.10 ENSMUST00000130879.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_139383046_C/T chrX:139383046 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_139635295_C/T chrX:139635295 T ENSMUSG00000031438.11 ENSMUST00000113026.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_139635295_C/T chrX:139635295 T ENSMUSG00000031438.11 ENSMUST00000113027.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_139635295_C/T chrX:139635295 T ENSMUSG00000031438.11 ENSMUST00000113029.3 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_139790063_-/AGAT chrX:139790062-139790063 AGAT ENSMUSG00000081018.1 ENSMUST00000119176.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4937;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_140529670_ACAC/-/AC chrX:140529670-140529673 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_140529670_ACAC/-/AC chrX:140529670-140529673 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_140595102_G/C chrX:140595102 C ENSMUSG00000031431.13 ENSMUST00000112996.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_140816391_ATAT/-/AT chrX:140816391-140816394 - ENSMUSG00000042386.7 ENSMUST00000044179.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2958;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_140816391_ATAT/-/AT chrX:140816391-140816394 AT ENSMUSG00000042386.7 ENSMUST00000044179.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2958;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_140845442_AA/-/A chrX:140845442-140845443 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_140845442_AA/-/A chrX:140845442-140845443 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_140896182_A/G chrX:140896182 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_140997157_G/A chrX:140997157 A ENSMUSG00000079418.3 ENSMUST00000112971.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_140997157_G/A chrX:140997157 A ENSMUSG00000079418.3 ENSMUST00000153742.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4320;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_140999008_-/G chrX:140999007-140999008 G ENSMUSG00000079418.3 ENSMUST00000112971.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_140999024_A/G chrX:140999024 G ENSMUSG00000079418.3 ENSMUST00000112971.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141150033_AG/GT chrX:141150033-141150034 GT ENSMUSG00000079418.3 ENSMUST00000112971.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141152026_G/A chrX:141152026 A ENSMUSG00000079418.3 ENSMUST00000112971.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141309238_A/G chrX:141309238 G ENSMUSG00000031273.16 ENSMUST00000101205.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141309247_C/T chrX:141309247 T ENSMUSG00000031273.16 ENSMUST00000101205.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141655890_G/T chrX:141655890 T ENSMUSG00000031274.16 ENSMUST00000112930.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141655890_G/T chrX:141655890 T ENSMUSG00000031274.16 ENSMUST00000112931.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141655890_G/T chrX:141655890 T ENSMUSG00000031274.16 ENSMUST00000128669.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2460;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141655890_G/T chrX:141655890 T ENSMUSG00000031274.16 ENSMUST00000130732.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_141857725_C/- chrX:141857725 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_142052881_AGT/A/TGT chrX:142052881-142052883 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_142052881_AGT/A/TGT chrX:142052881-142052883 TGT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_142143837_G/A chrX:142143837 A ENSMUSG00000042282.4 ENSMUST00000042530.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_142576257_TT/- chrX:142576257-142576258 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_143084530_C/T chrX:143084530 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_143382535_ACAC/- chrX:143382535-143382538 - ENSMUSG00000031283.16 ENSMUST00000063029.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143382535_ACAC/- chrX:143382535-143382538 - ENSMUSG00000031283.16 ENSMUST00000074660.11 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143382535_ACAC/- chrX:143382535-143382538 - ENSMUSG00000031283.16 ENSMUST00000112878.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143382535_ACAC/- chrX:143382535-143382538 - ENSMUSG00000031283.16 ENSMUST00000166406.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143382535_ACAC/- chrX:143382535-143382538 - ENSMUSG00000031283.16 ENSMUST00000207415.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143470372_C/A chrX:143470372 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_143470808_G/A chrX:143470808 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_143470838_A/T chrX:143470838 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_143537845_C/A chrX:143537845 A ENSMUSG00000031284.16 ENSMUST00000033640.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143537845_C/A chrX:143537845 A ENSMUSG00000031284.16 ENSMUST00000134402.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143650496_GC/AA chrX:143650496-143650497 AA ENSMUSG00000031284.16 ENSMUST00000033640.13 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_143650496_GC/AA chrX:143650496-143650497 AA ENSMUSG00000031284.16 ENSMUST00000134402.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_144031304_C/T chrX:144031304 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_144276110_TCTGGTTTCTGTCTTTG/- chrX:144276110-144276126 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_144276132_ACTTCCTG/- chrX:144276132-144276139 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_144482793_ACAC/-/AC chrX:144482793-144482796 - ENSMUSG00000041710.4 ENSMUST00000040184.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_144482793_ACAC/-/AC chrX:144482793-144482796 AC ENSMUSG00000041710.4 ENSMUST00000040184.3 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_144482793_ACAC/-/AC chrX:144482793-144482796 - ENSMUSG00000041710.4 ENSMUST00000148240.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_144482793_ACAC/-/AC chrX:144482793-144482796 AC ENSMUSG00000041710.4 ENSMUST00000148240.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_144907084_GT/AC chrX:144907084-144907085 AC ENSMUSG00000071679.4 ENSMUST00000112843.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_145282641_G/T chrX:145282641 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_145544643_ACAC/-/AC chrX:145544643-145544646 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_145544643_ACAC/-/AC chrX:145544643-145544646 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_145550769_TT/- chrX:145550769-145550770 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_145740345_T/G chrX:145740345 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_146405500_A/C chrX:146405500 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_146405504_T/C chrX:146405504 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_147059496_AA/- chrX:147059496-147059497 - ENSMUSG00000041380.13 ENSMUST00000036303.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_147059496_AA/- chrX:147059496-147059497 - ENSMUSG00000041380.13 ENSMUST00000096299.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_147059496_AA/- chrX:147059496-147059497 - ENSMUSG00000041380.13 ENSMUST00000112831.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_147059496_AA/- chrX:147059496-147059497 - ENSMUSG00000041380.13 ENSMUST00000131999.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_147059496_AA/- chrX:147059496-147059497 - ENSMUSG00000041380.13 ENSMUST00000134368.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_147059496_AA/- chrX:147059496-147059497 - ENSMUSG00000041380.13 ENSMUST00000156697.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_147248562_ATAT/-/ATATAT chrX:147248562-147248565 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_147248562_ATAT/-/ATATAT chrX:147248562-147248565 ATATAT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_147653154_G/T chrX:147653154 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_147843709_T/C chrX:147843709 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_149983355_GTGT/-/GT chrX:149983355-149983358 - ENSMUSG00000095082.1 ENSMUST00000112740.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_149983355_GTGT/-/GT chrX:149983355-149983358 GT ENSMUSG00000095082.1 ENSMUST00000112740.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_150127234_TT/-/T/TTT chrX:150127234-150127235 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_150127234_TT/-/T/TTT chrX:150127234-150127235 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_150127234_TT/-/T/TTT chrX:150127234-150127235 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_151017492_TGTG/-/TG chrX:151017492-151017495 - ENSMUSG00000025266.11 ENSMUST00000026297.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 TG ENSMUSG00000025266.11 ENSMUST00000026297.11 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 - ENSMUSG00000025266.11 ENSMUST00000112691.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 TG ENSMUSG00000025266.11 ENSMUST00000112691.8 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 - ENSMUSG00000025266.11 ENSMUST00000124022.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 TG ENSMUSG00000025266.11 ENSMUST00000124022.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 - ENSMUSG00000025266.11 ENSMUST00000154393.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 TG ENSMUSG00000025266.11 ENSMUST00000154393.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 - ENSMUSG00000025266.11 ENSMUST00000156233.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151017492_TGTG/-/TG chrX:151017492-151017495 TG ENSMUSG00000025266.11 ENSMUST00000156233.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=170;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_151108107_TGTGTG/- chrX:151108107-151108112 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_151162180_G/T chrX:151162180 T ENSMUSG00000081625.1 ENSMUST00000117169.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3545;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_152132499_AA/- chrX:152132499-152132500 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_152333262_CACA/-/CA chrX:152333262-152333265 - ENSMUSG00000041096.13 ENSMUST00000044509.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3590;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_152333262_CACA/-/CA chrX:152333262-152333265 CA ENSMUSG00000041096.13 ENSMUST00000044509.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3590;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_152333262_CACA/-/CA chrX:152333262-152333265 - ENSMUSG00000041096.13 ENSMUST00000138918.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3587;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_152333262_CACA/-/CA chrX:152333262-152333265 CA ENSMUSG00000041096.13 ENSMUST00000138918.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3587;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_152333262_CACA/-/CA chrX:152333262-152333265 - ENSMUSG00000041096.13 ENSMUST00000149685.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3587;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_152333262_CACA/-/CA chrX:152333262-152333265 CA ENSMUSG00000041096.13 ENSMUST00000149685.7 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3587;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_152447122_TGTG/-/TG chrX:152447122-152447125 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_152447122_TGTG/-/TG chrX:152447122-152447125 TG - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_152595402_TT/- chrX:152595402-152595403 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_153259663_T/- chrX:153259663 - ENSMUSG00000041649.13 ENSMUST00000112574.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_153259663_T/- chrX:153259663 - ENSMUSG00000041649.13 ENSMUST00000143880.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_153368689_TT/- chrX:153368689-153368690 - ENSMUSG00000041649.13 ENSMUST00000039545.4 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_153368689_TT/- chrX:153368689-153368690 - ENSMUSG00000041649.13 ENSMUST00000112574.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_153368689_TT/- chrX:153368689-153368690 - ENSMUSG00000041649.13 ENSMUST00000143880.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_153590493_AA/- chrX:153590493-153590494 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_154274979_A/- chrX:154274979 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_154469908_AA/- chrX:154469908-154469909 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_154804801_C/T chrX:154804801 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_155408892_TT/-/TTT chrX:155408892-155408893 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_155408892_TT/-/TTT chrX:155408892-155408893 TTT - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_155471685_ACAC/-/AC chrX:155471685-155471688 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_155471685_ACAC/-/AC chrX:155471685-155471688 AC - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_155575212_GA/G/AA/GAA chrX:155575212-155575213 G ENSMUSG00000041552.7 ENSMUST00000038665.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_155575212_GA/G/AA/GAA chrX:155575212-155575213 AA ENSMUSG00000041552.7 ENSMUST00000038665.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_155575212_GA/G/AA/GAA chrX:155575212-155575213 GAA ENSMUSG00000041552.7 ENSMUST00000038665.5 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_155575212_GA/G/AA/GAA chrX:155575212-155575213 G ENSMUSG00000041552.7 ENSMUST00000170236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_155575212_GA/G/AA/GAA chrX:155575212-155575213 AA ENSMUSG00000041552.7 ENSMUST00000170236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_155575212_GA/G/AA/GAA chrX:155575212-155575213 GAA ENSMUSG00000041552.7 ENSMUST00000170236.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_155784330_GTGT/- chrX:155784330-155784333 - ENSMUSG00000055109.5 ENSMUST00000112542.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_155784330_GTGT/- chrX:155784330-155784333 - ENSMUSG00000055109.5 ENSMUST00000128838.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 - ENSMUSG00000071708.11 ENSMUST00000112529.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 A ENSMUSG00000071708.11 ENSMUST00000112529.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 - ENSMUSG00000071708.11 ENSMUST00000123770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 A ENSMUSG00000071708.11 ENSMUST00000123770.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 - ENSMUSG00000071708.11 ENSMUST00000127089.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 A ENSMUSG00000071708.11 ENSMUST00000127089.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 - ENSMUSG00000071708.11 ENSMUST00000145477.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157468325_AA/-/A chrX:157468325-157468326 A ENSMUSG00000071708.11 ENSMUST00000145477.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_157769500_A/G chrX:157769500 G ENSMUSG00000086188.1 ENSMUST00000130794.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_158542130_TTTT/- chrX:158542130-158542133 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_158635964_TGTG/- chrX:158635964-158635967 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_159233554_GAGGGAGGGAGGGAGG/- chrX:159233554-159233569 - ENSMUSG00000031309.15 ENSMUST00000112493.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_159587917_TT/- chrX:159587917-159587918 - ENSMUSG00000044150.12 ENSMUST00000057180.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_159587917_TT/- chrX:159587917-159587918 - ENSMUSG00000044150.12 ENSMUST00000112464.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_159587917_TT/- chrX:159587917-159587918 - ENSMUSG00000083906.1 ENSMUST00000119345.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=547;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_159587917_TT/- chrX:159587917-159587918 - ENSMUSG00000082693.3 ENSMUST00000120855.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2859;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_159587917_TT/- chrX:159587917-159587918 - ENSMUSG00000044150.12 ENSMUST00000149054.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160197188_T/A chrX:160197188 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_160252589_CACA/-/CA chrX:160252589-160252592 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_160252589_CACA/-/CA chrX:160252589-160252592 CA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000031298.15 ENSMUST00000112398.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000031298.15 ENSMUST00000112398.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000031298.15 ENSMUST00000112400.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000031298.15 ENSMUST00000112400.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000031298.15 ENSMUST00000112401.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000031298.15 ENSMUST00000112401.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000031298.15 ENSMUST00000112402.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000031298.15 ENSMUST00000112402.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000031298.15 ENSMUST00000112404.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000031298.15 ENSMUST00000112404.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000031298.15 ENSMUST00000112405.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000031298.15 ENSMUST00000112405.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000031298.15 ENSMUST00000112408.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000031298.15 ENSMUST00000112408.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 - ENSMUSG00000087505.1 ENSMUST00000125700.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160489904_ACAC/-/AC chrX:160489904-160489907 AC ENSMUSG00000087505.1 ENSMUST00000125700.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562148_C/A chrX:160562148 A ENSMUSG00000031295.13 ENSMUST00000033652.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562148_C/A chrX:160562148 A ENSMUSG00000031295.13 ENSMUST00000112376.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3193;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562148_C/A chrX:160562148 A ENSMUSG00000031295.13 ENSMUST00000112377.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562148_C/A chrX:160562148 A ENSMUSG00000031295.13 ENSMUST00000112380.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562148_C/A chrX:160562148 A ENSMUSG00000031295.13 ENSMUST00000139496.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562148_C/A chrX:160562148 A ENSMUSG00000031295.13 ENSMUST00000153907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562204_CA/TT chrX:160562204-160562205 TT ENSMUSG00000031295.13 ENSMUST00000033652.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562204_CA/TT chrX:160562204-160562205 TT ENSMUSG00000031295.13 ENSMUST00000112376.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3249;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562204_CA/TT chrX:160562204-160562205 TT ENSMUSG00000031295.13 ENSMUST00000112377.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562204_CA/TT chrX:160562204-160562205 TT ENSMUSG00000031295.13 ENSMUST00000112380.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562204_CA/TT chrX:160562204-160562205 TT ENSMUSG00000031295.13 ENSMUST00000139496.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562204_CA/TT chrX:160562204-160562205 TT ENSMUSG00000031295.13 ENSMUST00000153907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562535_A/C chrX:160562535 C ENSMUSG00000031295.13 ENSMUST00000033652.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562535_A/C chrX:160562535 C ENSMUSG00000031295.13 ENSMUST00000112376.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3580;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562535_A/C chrX:160562535 C ENSMUSG00000031295.13 ENSMUST00000112377.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562535_A/C chrX:160562535 C ENSMUSG00000031295.13 ENSMUST00000112380.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562535_A/C chrX:160562535 C ENSMUSG00000031295.13 ENSMUST00000139496.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160562535_A/C chrX:160562535 C ENSMUSG00000031295.13 ENSMUST00000153907.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160878191_G/A chrX:160878191 A ENSMUSG00000031292.14 ENSMUST00000087104.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160878191_G/A chrX:160878191 A ENSMUSG00000031292.14 ENSMUST00000196297.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160878191_G/A chrX:160878191 A ENSMUSG00000031292.14 ENSMUST00000197942.4 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_160878191_G/A chrX:160878191 A ENSMUSG00000031292.14 ENSMUST00000198931.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_161732787_G/C chrX:161732787 C ENSMUSG00000043518.7 ENSMUST00000061514.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_161732787_G/C chrX:161732787 C ENSMUSG00000043518.7 ENSMUST00000112338.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_161761063_C/A chrX:161761063 A ENSMUSG00000043518.7 ENSMUST00000061514.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_161761063_C/A chrX:161761063 A ENSMUSG00000043518.7 ENSMUST00000112338.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_161877488_TCTC/- chrX:161877488-161877491 - ENSMUSG00000059493.13 ENSMUST00000081569.6 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_161877488_TCTC/- chrX:161877488-161877491 - ENSMUSG00000059493.13 ENSMUST00000087085.9 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_162644668_GTGT/-/GT chrX:162644668-162644671 - ENSMUSG00000040855.15 ENSMUST00000101102.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1067;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_162644668_GTGT/-/GT chrX:162644668-162644671 GT ENSMUSG00000040855.15 ENSMUST00000101102.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1067;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_162644668_GTGT/-/GT chrX:162644668-162644671 - ENSMUSG00000040855.15 ENSMUST00000112334.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1019;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_162644668_GTGT/-/GT chrX:162644668-162644671 GT ENSMUSG00000040855.15 ENSMUST00000112334.7 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1019;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163397611_G/T chrX:163397611 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_163719265_CT/- chrX:163719265-163719266 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_163772534_CACA/-/CACACA chrX:163772534-163772537 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_163772534_CACA/-/CACACA chrX:163772534-163772537 CACACA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_163946266_AGAG/-/AG chrX:163946266-163946269 - ENSMUSG00000031370.12 ENSMUST00000090840.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4117;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 AG ENSMUSG00000031370.12 ENSMUST00000090840.9 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4117;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 - ENSMUSG00000031370.12 ENSMUST00000112289.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 AG ENSMUSG00000031370.12 ENSMUST00000112289.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 - ENSMUSG00000031370.12 ENSMUST00000124719.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2670;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 AG ENSMUSG00000031370.12 ENSMUST00000124719.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2670;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 - ENSMUSG00000031370.12 ENSMUST00000132350.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 AG ENSMUSG00000031370.12 ENSMUST00000132350.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 - ENSMUSG00000031370.12 ENSMUST00000145962.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2790;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_163946266_AGAG/-/AG chrX:163946266-163946269 AG ENSMUSG00000031370.12 ENSMUST00000145962.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2790;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164066036_AA/- chrX:164066036-164066037 - ENSMUSG00000040749.11 ENSMUST00000037928.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4668;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164066036_AA/- chrX:164066036-164066037 - ENSMUSG00000040749.11 ENSMUST00000071667.8 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4668;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164228511_A/- chrX:164228511 - ENSMUSG00000031377.11 ENSMUST00000112263.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164228511_A/- chrX:164228511 - ENSMUSG00000031377.11 ENSMUST00000112265.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164273871_AA/- chrX:164273871-164273872 - ENSMUSG00000031379.13 ENSMUST00000033749.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164273871_AA/- chrX:164273871-164273872 - ENSMUSG00000031379.13 ENSMUST00000123343.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164273871_AA/- chrX:164273871-164273872 - ENSMUSG00000031379.13 ENSMUST00000127685.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1997;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164273871_AA/- chrX:164273871-164273872 - ENSMUSG00000031379.13 ENSMUST00000129296.7 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164273871_AA/- chrX:164273871-164273872 - ENSMUSG00000031379.13 ENSMUST00000145412.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_164768016_CACA/- chrX:164768016-164768019 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_165390334_AAAA/-/AAA chrX:165390334-165390337 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_165390334_AAAA/-/AAA chrX:165390334-165390337 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_165648211_A/C chrX:165648211 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_165714253_AA/- chrX:165714253-165714254 - ENSMUSG00000064497.1 ENSMUST00000082563.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3155;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_165899144_AAAA/-/AAA/AAAAA chrX:165899144-165899147 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_165899144_AAAA/-/AAA/AAAAA chrX:165899144-165899147 AAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_165899144_AAAA/-/AAA/AAAAA chrX:165899144-165899147 AAAAA - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_166429105_-/A chrX:166429104-166429105 A ENSMUSG00000040586.8 ENSMUST00000049501.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_166501132_T/C chrX:166501132 C ENSMUSG00000051224.13 ENSMUST00000112187.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2160;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_166501132_T/C chrX:166501132 C ENSMUSG00000051224.13 ENSMUST00000112188.7 Transcript 3_prime_UTR_variant 2730 - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_166501132_T/C chrX:166501132 C ENSMUSG00000051224.13 ENSMUST00000180322.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1186;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_166778248_ACAC/- chrX:166778248-166778251 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_166974094_T/C chrX:166974094 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_167628042_AGAG/- chrX:167628042-167628045 - ENSMUSG00000049176.14 ENSMUST00000112145.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_167628042_AGAG/- chrX:167628042-167628045 - ENSMUSG00000049176.14 ENSMUST00000112146.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_167628042_AGAG/- chrX:167628042-167628045 - ENSMUSG00000049176.14 ENSMUST00000112147.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_167628042_AGAG/- chrX:167628042-167628045 - ENSMUSG00000049176.14 ENSMUST00000112149.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_167867334_TG/- chrX:167867334-167867335 - ENSMUSG00000049176.14 ENSMUST00000112145.2 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_167867334_TG/- chrX:167867334-167867335 - ENSMUSG00000049176.14 ENSMUST00000112147.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_167867334_TG/- chrX:167867334-167867335 - ENSMUSG00000049176.14 ENSMUST00000112149.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_168109170_G/A chrX:168109170 A ENSMUSG00000049176.14 ENSMUST00000112147.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_168109170_G/A chrX:168109170 A ENSMUSG00000049176.14 ENSMUST00000112149.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_168113177_CACA/- chrX:168113177-168113180 - ENSMUSG00000049176.14 ENSMUST00000112147.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_168113177_CACA/- chrX:168113177-168113180 - ENSMUSG00000049176.14 ENSMUST00000112149.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_168291195_A/G chrX:168291195 G ENSMUSG00000049176.14 ENSMUST00000112147.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 - ENSMUSG00000031355.16 ENSMUST00000033721.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 TG ENSMUSG00000031355.16 ENSMUST00000033721.12 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 - ENSMUSG00000031355.16 ENSMUST00000087016.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 TG ENSMUSG00000031355.16 ENSMUST00000087016.10 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 - ENSMUSG00000031355.16 ENSMUST00000112127.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=552;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 TG ENSMUSG00000031355.16 ENSMUST00000112127.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=552;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 - ENSMUSG00000031355.16 ENSMUST00000112129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 TG ENSMUSG00000031355.16 ENSMUST00000112129.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 - ENSMUSG00000031355.16 ENSMUST00000112131.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 TG ENSMUSG00000031355.16 ENSMUST00000112131.8 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 - ENSMUSG00000031355.16 ENSMUST00000139146.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 TG ENSMUSG00000031355.16 ENSMUST00000139146.7 Transcript intron_variant,NMD_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 - ENSMUSG00000031355.16 ENSMUST00000143048.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_169112492_TGTG/-/TG chrX:169112492-169112495 TG ENSMUSG00000031355.16 ENSMUST00000143048.1 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrX_170735188_G/C chrX:170735188 C - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_170735202_A/G chrX:170735202 G - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrX_170837157_TGTGTGTCAGGGCCTCACACCTCTGCTGTGTGTGTGTCAGGGCCTCACACCTCTGCTGTG/- chrX:170837157-170837216 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrY_4942656_G/A chrY:4942656 A ENSMUSG00000099575.1 ENSMUST00000189141.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1260;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_4942680_-/CTTCTGGAA chrY:4942679-4942680 CTTCTGGAA ENSMUSG00000099575.1 ENSMUST00000189141.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1283;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_10709286_G/A chrY:10709286 A ENSMUSG00000100074.1 ENSMUST00000190819.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3816;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_22716992_G/T chrY:22716992 T - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrY_35978036_T/- chrY:35978036 - ENSMUSG00000102058.6 ENSMUST00000186912.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2926;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_35978036_T/- chrY:35978036 - ENSMUSG00000102058.6 ENSMUST00000190138.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3346;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_35978036_T/- chrY:35978036 - ENSMUSG00000102058.6 ENSMUST00000190482.6 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3346;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_40029533_G/A chrY:40029533 A - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrY_43919273_C/- chrY:43919273 - - - - intergenic_variant - - - - - - IMPACT=MODIFIER chrY_77342821_C/A chrY:77342821 A ENSMUSG00000095179.2 ENSMUST00000179473.2 Transcript intron_variant,non_coding_transcript_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_90805430_A/T chrY:90805430 T ENSMUSG00000096768.7 ENSMUST00000177591.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_90805430_A/T chrY:90805430 T ENSMUSG00000096768.7 ENSMUST00000177671.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_90805430_A/T chrY:90805430 T ENSMUSG00000096768.7 ENSMUST00000179077.1 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrY_90805430_A/T chrY:90805430 T ENSMUSG00000096768.7 ENSMUST00000179483.7 Transcript intron_variant - - - - - - IMPACT=MODIFIER;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064336.1 ENSMUST00000082387.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2884;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064337.1 ENSMUST00000082388.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1928;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064338.1 ENSMUST00000082389.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1859;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064339.1 ENSMUST00000082390.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=277;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064340.1 ENSMUST00000082391.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=202;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064341.1 ENSMUST00000082392.1 Transcript missense_variant 202 202 68 I/V Ata/Gta - IMPACT=MODERATE;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064342.1 ENSMUST00000082393.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=754;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064343.1 ENSMUST00000082394.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=820;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064344.1 ENSMUST00000082395.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=893;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064345.1 ENSMUST00000082396.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=962;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064346.1 ENSMUST00000082397.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1998;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064347.1 ENSMUST00000082398.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2066;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064348.1 ENSMUST00000082399.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2137;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064349.1 ENSMUST00000082400.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2240;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064350.1 ENSMUST00000082401.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2308;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064351.1 ENSMUST00000082402.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2376;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064352.1 ENSMUST00000082403.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3918;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064353.1 ENSMUST00000082404.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3990;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064354.1 ENSMUST00000082405.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4061;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064355.1 ENSMUST00000082406.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4748;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064356.3 ENSMUST00000082407.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4814;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_2952_A/G chrM:2952 G ENSMUSG00000064357.1 ENSMUST00000082408.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4975;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064357.1 ENSMUST00000082408.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=4445;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064358.1 ENSMUST00000082409.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3662;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064359.1 ENSMUST00000082410.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3594;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064360.1 ENSMUST00000082411.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3246;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064361.1 ENSMUST00000082412.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=3177;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064363.1 ENSMUST00000082414.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1508;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064364.1 ENSMUST00000082415.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1440;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064365.1 ENSMUST00000082416.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1381;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064366.1 ENSMUST00000082417.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1311;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064367.1 ENSMUST00000082418.1 Transcript frameshift_variant 1311-1312 1311-1312 437-438 -/X -/C - IMPACT=HIGH;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064368.1 ENSMUST00000082419.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=499;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064369.1 ENSMUST00000082420.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1018;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064370.1 ENSMUST00000082421.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=1092;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064371.1 ENSMUST00000082422.1 Transcript upstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2236;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000064372.1 ENSMUST00000082423.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2303;STRAND=-1;SOURCE=gencode.vM20.annotation.gtf.gz chrM_13053_-/C chrM:13052-13053 C ENSMUSG00000065947.3 ENSMUST00000084013.1 Transcript downstream_gene_variant - - - - - - IMPACT=MODIFIER;DISTANCE=2879;STRAND=1;SOURCE=gencode.vM20.annotation.gtf.gz