tophat_reports v2.0.14 (4318) --------------------------------------- [samopen] SAM header is present: 23 sequences. Loading 10...done Loading 11...done Loading 12...done Loading 13...done Loading 14...done Loading 15...done Loading 16...done Loading 17...done Loading 18...done Loading 19...done Loading 1...done Loading 20...done Loading 2...done Loading 3...done Loading 4...done Loading 5...done Loading 6...done Loading 7...done Loading 8...done Loading 9...done Loading MT...done Loading X...done Loading Y...done Loading ...done Loaded 195748 GFF junctions from A3CO_13059_CGATGT/tmp/genes.juncs. Loaded 207604 junctions Printing junction BED track...done Printing insertions...done Printing deletions...done Found 77656 junctions from happy spliced reads