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[DIR]Parent Directory  -
[DIR]aggregation/21-Jul-2018 12:30 -
[DIR]chrom-states/22-Apr-2018 09:26 -
[DIR]DEG/09-Apr-2018 18:11 -
[DIR]line-plots/01-May-2018 14:20 -
[DIR]linear-tissue-model/09-Apr-2018 23:06 -
[DIR]mouse-corr/17-Jul-2020 09:35 -
[DIR]rgc/09-Apr-2018 18:26 -
[DIR]scRNA/18-Apr-2018 01:22 -
[DIR]varDecom/09-Apr-2018 17:46 -
[ ]Rplots.pdf22-Mar-2019 13:42 3.5K
[ ]proj.score.S4.pdf07-Apr-2018 21:56 4.7K
[ ]pca.dv.deg.batch.pdf14-Apr-2018 01:05 4.7K
[ ]pca.1_2.dv.deg.pdf14-Apr-2018 01:05 4.8K
[ ]pca.1_3.dv.deg.pdf14-Apr-2018 01:05 4.8K
[ ]pca.3_4.dv.deg.pdf14-Apr-2018 01:05 4.8K
[ ]pca.ap.deg.batch.pdf14-Apr-2018 01:05 4.8K
[ ]pca.counts.gt5TPM2samples.batch.pdf14-Apr-2018 01:05 4.8K
[ ]pca.1_2.ap.deg.pdf14-Apr-2018 01:05 4.9K
[ ]pca.3_4.ap.deg.pdf14-Apr-2018 01:05 4.9K
[ ]pca.labels.counts.gt5TPM2samples.3D.pdf14-Apr-2018 01:05 4.9K
[ ]pca.1_3.ap.deg.pdf14-Apr-2018 01:05 4.9K
[ ]pca.ap.deg.3D.pdf14-Apr-2018 01:05 5.0K
[ ]GO_groups_allterms_filt_projection_score.pdf09-Apr-2018 16:19 5.0K
[ ]nbPSI-envents.pdf01-Feb-2019 22:54 5.0K
[ ]pca.dv.deg.3D.pdf14-Apr-2018 01:05 5.0K
[ ]pca.1_3.labels.counts.gt5TPM2samples.pdf14-Apr-2018 01:05 5.0K
[ ]pca.1_2.labels.counts.gt5TPM2samples.pdf14-Apr-2018 01:05 5.0K
[ ]pca.3_4.labels.counts.gt5TPM2samples.pdf14-Apr-2018 01:05 5.0K
[ ]barplot2.pdf05-Jun-2020 09:59 5.2K
[ ]barplot3.pdf05-Jun-2020 09:59 5.3K
[ ]GO_bg-DEG_most-specific_selectedterms_filtered_TSGs.pdf05-Oct-2019 23:31 5.3K
[ ]per4.comp.2018-04-04_trypsin_TPM.map.pdf17-Apr-2018 22:50 5.3K
[ ]barplot.pdf05-Jun-2020 09:59 5.4K
[ ]all-AEG.pdf12-Nov-2018 14:54 5.6K
[ ]barplot.H3K4me3.pdf07-Nov-2019 02:10 5.6K
[ ]barplot.faire-nrom-per-target-group-TF-TF_nbtargets.pdf07-Nov-2019 00:02 5.7K
[ ]GO_bg-DEG_most-specific_selectedterms_filtered_SGs.pdf05-Oct-2019 23:31 5.8K
[ ]Genomic.Features.r6.36.pdf07-Dec-2020 22:05 5.8K
[ ]barplot4.pdf05-Jun-2020 09:59 5.8K
[ ]all-AG.pdf12-Nov-2018 14:51 5.8K
[ ]barplot.faire-nrom-per-target-group-TF-target_nbtargets.pdf07-Nov-2019 00:04 5.9K
[ ]GO_bg-DEG_most-specific_selectedterms_filtered_TGs.pdf05-Oct-2019 23:31 5.9K
[ ]DEG-in-cluster-minor-groups_byGeneType.pdf19-Oct-2018 16:12 6.0K
[ ]per7.tmp.map.pdf07-Apr-2018 21:25 6.1K
[ ]pca.1_2.inuse.idr.erc.dmel.selected.replicates.trypsin.gene.FPKM.idr_NA.pdf22-Oct-2018 03:29 6.1K
[ ]barplot.faire-nrom-per-target-group-TF-TF_sw_nbtargets.pdf06-Nov-2019 23:40 6.3K
[ ]GO_bg-DEG_most-specific_allterms_filtered_TSGs.pdf05-Oct-2019 23:22 6.6K
[ ]summary.out.pdf22-Oct-2018 03:26 6.6K
[ ]barplot.faire-nrom-per-target-group-TF-target_sw_nbtargets.pdf06-Nov-2019 23:40 6.6K
[ ]barplot_sw_states_selected.pdf08-Oct-2019 01:24 6.7K
[ ]barplot_ratioTPM_filt.pdf09-Apr-2018 15:50 7.2K
[ ]GO_modules_top3.pdf31-Jul-2020 09:38 7.5K
[ ]GO_modules.pdf31-Jul-2020 09:35 7.5K
[ ]GO_groups_allterms_filtered.pdf17-Apr-2018 23:17 7.6K
[ ]barplot_ratioTPM_nonFilt.pdf09-Apr-2018 15:46 7.9K
[ ]Liver.12wpc.27.pdf24-Jul-2019 22:03 8.1K
[ ]Liver.e13.5.1.pdf24-Jul-2019 21:52 8.2K
[ ]boxplot.diff.pdf29-Jul-2018 01:13 8.3K
[ ]GO_groups_allterms_filtered_all.pdf17-Apr-2018 23:26 8.5K
[ ]gene_profiles_rgc.pdf06-Jun-2018 23:22 8.7K
[ ]GO_bg-DEG_most-specific_allterms_filtered_SGs.pdf05-Oct-2019 23:22 9.0K
[ ]GO_bg-DEG_most-specific_allterms_filtered_TGs.pdf05-Oct-2019 23:22 9.6K
[IMG]Drosophila_melanogaster.jpg10-Dec-2014 18:55 9.6K
[ ]heatmap_MX.pdf02-Feb-2019 00:52 10K
[ ]heatmap_AL.pdf02-Feb-2019 00:52 10K
[ ]GO_bg-DEG_most-specific_allterms_filtered_SGs_L3_WP.pdf05-Oct-2019 23:22 11K
[IMG]prop_mapped_reads.png22-Oct-2018 03:24 11K
[ ]tmp.pdf28-Nov-2018 10:18 11K
[ ]corr500-WL3.pdf28-Nov-2018 10:18 11K
[ ]corr-WL3.pdf28-Nov-2018 10:18 11K
[ ]heatmap_A3.pdf02-Feb-2019 00:52 11K
[ ]GO_modules_top10.pdf31-Jul-2020 09:41 12K
[ ]GO_groups_allterms.pdf14-Apr-2018 01:28 12K
[ ]heatmap_RI.pdf02-Feb-2019 00:52 12K
[ ]test.pdf30-Jan-2019 17:58 13K
[ ]boxplot.numberOfAlignments.pdf29-Jul-2018 01:13 13K
[ ]corr-H3K4m3.pdf28-Nov-2018 10:18 14K
[ ]corr500-H3K4m3.pdf28-Nov-2018 10:18 14K
[ ]heatmap_pearson_inuse.idr.erc.dmel.selected.replicates.trypsin.gene.FPKM.idr_NA_all_plain.pdf22-Oct-2018 03:31 15K
[ ]heatmap_A5.pdf02-Feb-2019 00:52 15K
[ ]heatmap_SE.pdf02-Feb-2019 00:52 16K
[ ]TF-counts-per-deg-minor-group-0-1_sorted_subset.pdf02-Feb-2019 11:13 17K
[ ]ggboxplot-permutations.pdf07-Nov-2019 21:08 18K
[IMG]movie.gif08-Oct-2019 16:53 19K
[ ]ggheatmap_TPM_ap.pdf14-Apr-2018 12:33 20K
[ ]TF-counts-per-deg-minor-group-0-1_sorted.pdf02-Feb-2019 11:12 20K
[ ]color.scatterplot.anova.abline.threshold.Tissue_Stage.new-tissue.gt5TPM2samples_0-1_density.pdf13-Apr-2020 15:15 21K
[ ]GO.pca.1_2.pdf30-Jan-2019 17:21 28K
[ ]ggheatmap_TPM_dv.pdf14-Apr-2018 12:35 28K
[ ]heatmap_AF.pdf02-Feb-2019 00:52 30K
[ ]boxplot.min.pdf29-Jul-2018 01:11 31K
[ ]heatmap_pearson_ward.D2_numbersOff_2018-04-04_trypsin_TPM.pdf09-Apr-2018 16:04 31K
[ ]boxplot.max.pdf29-Jul-2018 01:11 31K
[ ]heatmap_pearson_projectionS4_ward.D2_woNum.pdf07-Apr-2018 21:55 32K
[ ]GO_modules_all.pdf23-Jun-2020 09:11 34K
[ ]DEG.pca.1_2.pdf27-Apr-2020 09:54 34K
[ ]ggheatmap_TPM_comp.pdf14-Apr-2018 13:38 42K
[ ]GO_modules_all_shrinked.pdf31-Jul-2020 09:44 43K
[ ]heatmap_pearson_inuse.idr.erc.dmel.selected.replicates.trypsin.gene.FPKM.idr_NA.pdf22-Oct-2018 03:32 44K
[ ]heatmap_pearson_2018-04-04_trypsin_TPM.pdf09-Apr-2018 16:07 45K
[ ]points.norm-avg-nbAlignments_non-core.pdf29-Jul-2018 01:30 50K
[IMG]fly.jpg01-Nov-2018 16:39 56K
[ ]teste.heatmap.pdf06-Jun-2018 22:43 66K
[ ]edgeR.cpm1.n2.ap.pdf14-Apr-2018 00:54 68K
[ ]points.norm-avg-nbAlignments.pdf29-Jul-2018 01:26 70K
[ ]edgeR.cpm1.n2.dv.pdf14-Apr-2018 00:54 71K
[ ]points.diff-nbAlignments.pdf29-Jul-2018 01:16 73K
[ ]figureS3.pdf19-Apr-2020 19:45 78K
[ ]edgeR.cpm1.n2.out.pdf14-Apr-2018 00:54 80K
[ ]H3K4me3_NG_ERC.pdf22-Mar-2019 13:43 82K
[ ]H3K4me3_NG_ERC_QN.pdf22-Mar-2019 13:42 83K
[IMG]figureS3.png19-Apr-2020 19:46 85K
[ ]points.norm-avg-nbAlignments_color-by-phastCons.pdf29-Jul-2018 01:35 85K
[IMG]figure2.png19-Apr-2020 19:48 85K
[ ]sashimi.pdf07-Feb-2019 12:38 86K
[ ]points.max-peak-length.pdf29-Jul-2018 01:21 89K
[ ]points.avg-peak-length.pdf29-Jul-2018 01:16 92K
[IMG]GO_modules_top3.png23-Jun-2020 08:59 100K
[IMG]0h_groups.png05-Jun-2018 16:32 102K
[ ]test2.pdf17-Nov-2018 22:15 103K
[ ]teste.heatmap2.pdf06-Jun-2018 22:33 105K
[ ]boxplot-intersect-peak-length.pdf05-May-2020 18:32 106K
[IMG]0h_ctrl_groups.png05-Jun-2018 16:34 112K
[ ]RNApolII.erc.pdf18-May-2018 15:16 121K
[ ]H3K27ac.erc.pdf18-May-2018 15:16 122K
[ ]H3K4me1.erc.pdf18-May-2018 15:16 126K
[ ]SOM.pdf24-Jul-2019 21:52 133K
[ ]boxplot-merge-peak-length.pdf05-May-2020 18:33 137K
[IMG]GO_modules.png23-Jun-2020 08:43 153K
[IMG]0h__groups.png05-Jun-2018 15:01 155K
[ ]ggheatmap_genes_sortedDEG_avg_TPM.pdf22-Oct-2018 03:37 165K
[ ]full.pdf07-Feb-2019 12:57 169K
[ ]ggheatmap_genes_sortedDEG_avg_TPM_minor-groups.pdf13-Apr-2020 15:44 188K
[ ]NIH3K27ac_peak.pdf25-May-2018 16:48 196K
[ ]ggheatmap_genes_sortedDEG_avg_TPM_rdata.pdf22-Oct-2018 03:37 218K
[ ]boxplot-peak-length.pdf05-May-2020 18:36 237K
[ ]evol_plot_v2.pdf06-Nov-2018 15:05 299K
[ ]ggheatmap_genes_sortedDEG_avg_TPM_all_tissues.pdf22-Oct-2018 03:37 310K
[ ]tSNE.montage.comp.2018-04-04_trypsin_TPM.pdf17-Apr-2018 22:45 317K
[TXT]mouse_cns_E18_rep1_1_fastqc.html12-Jul-2018 15:57 336K
[ ]evol.pdf21-Jan-2019 16:18 419K
[ ]tSNE.montage.erc.filter-rRNA-pseudogenes-dmel.trypsin.gene.TPM_new.idr_NA.pdf07-Apr-2018 21:23 570K
[ ]pca.3D.angles.pdf08-Oct-2019 23:48 605K
[ ]180419_D00733_0322_ACCC66ANXX_ElenaVizcaya.pdf07-Jun-2018 15:14 614K
[ ]0h_C_down_groups.pdf05-Jun-2018 17:14 650K
[ ]0h_S_down_groups.pdf05-Jun-2018 17:14 683K
[ ]0h_reg_down_groups.pdf05-Jun-2018 16:51 689K
[ ]figure1.pdf13-Oct-2019 18:31 739K
[ ]rpkm_fraction.TPM_trypsin_nonFilt.pdf09-Apr-2018 15:57 1.9M
[ ]rpkm_fraction.TPM_trypsin_filt.pdf09-Apr-2018 15:57 2.0M
[IMG]test.GIF08-Oct-2019 23:06 2.7M
[IMG]scatter4.GIF08-Oct-2019 20:59 3.4M
[IMG]scatter3.GIF08-Oct-2019 20:30 5.5M
[IMG]scatter2.GIF08-Oct-2019 20:30 6.3M
[IMG]scatter.GIF08-Oct-2019 20:09 7.3M
[ ]0h_C_up_groups.pdf05-Jun-2018 17:14 8.7M
[ ]0h_ctrl_groups.pdf05-Jun-2018 16:51 8.7M
[ ]0h__groups.pdf05-Jun-2018 15:18 8.9M
[ ]0h_reg_up_groups.pdf05-Jun-2018 16:51 9.1M
[ ]0h_S_up_groups.pdf05-Jun-2018 17:14 9.1M
[ ]0h_25_groups.pdf05-Jun-2018 15:40 9.7M
[IMG]output.GIF08-Oct-2019 19:58 18M
[ ]evol_plot.pdf13-Sep-2017 12:54 20M
[ ]figure4.pdf08-Oct-2019 00:47 35M
[ ]0h_groups.pdf05-Jun-2018 16:51 62M
[ ]figure5.pdf28-Oct-2019 18:59 204M