http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878CellT.md5sum type=md5sum; md5sum=d41d8cd98f00b204e9800998ecf8427e; size=0; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878CellTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=GM12878; localization=cell; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000016; dateSubmitted=2009-03-10; dateUnrestricted=2009-12-10; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsGm12878CellTotal; type=broadPeak; md5sum=c4049a3cfbb6b3e74cb776ee4e4309f9; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878CellTotal.broadPeak.gz.md5sum project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=GM12878; localization=cell; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000016; dateSubmitted=2009-03-10; dateUnrestricted=2009-12-10; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsGm12878CellTotal; type=unknown; md5sum=d6e4a09361b4a5f4b55307c043d6a9a9; size=120; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000012; dateSubmitted=2008-12-09; dateUnrestricted=2009-09-09; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongnonpolya; type=broadPeak; md5sum=08d5feb7211a40c99a5ce374c6d0a169; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000002; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsGm12878CytosolLongpolya; type=broadPeak; md5sum=9cb30fe0ff4c6c6d9bf9add1957a77f5; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878NucleolusTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=GM12878; localization=nucleolus; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000026; dateSubmitted=2009-08-27; dateUnrestricted=2010-05-27; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleolusTotal; type=broadPeak; md5sum=86fa269224f528b52bf15faa387af12d; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000003; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongnonpolya; type=broadPeak; md5sum=c8d8604e208bcec85075a97e2d855c71; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000017; dateSubmitted=2009-04-01; dateUnrestricted=2010-01-01; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsGm12878NucleusLongpolya; type=broadPeak; md5sum=e59db684bc92f9e33587c70d4e93de39; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000018; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongnonpolya; type=broadPeak; md5sum=c63550ce1c70b8698ff1ebe8c45006a4; size=10M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000019; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsHepg2CytosolLongpolya; type=broadPeak; md5sum=dd5884e11508353026efa46e8abf7547; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsHepg2NucleolusTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=HepG2; localization=nucleolus; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000027; dateSubmitted=2009-08-27; dateUnrestricted=2010-05-27; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleolusTotal; type=broadPeak; md5sum=0695013271cc3de1ed2ad9e939ba99a9; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000024; dateSubmitted=2009-07-17; dateUnrestricted=2010-04-17; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongnonpolya; type=broadPeak; md5sum=85a8b1587c51918a570d1f524c4c195f; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000025; dateSubmitted=2009-07-17; dateUnrestricted=2010-04-17; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsHepg2NucleusLongpolya; type=broadPeak; md5sum=3fe85744838e14970ec0621c28c4828e; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562CellTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=cell; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000011; dateSubmitted=2008-11-25; dateUnrestricted=2009-08-25; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562CellTotal; type=broadPeak; md5sum=c645fad30a8748c849f6dac1f00bf931; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562ChromatinTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=chromatin; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000013; dateSubmitted=2009-01-09; dateUnrestricted=2009-10-09; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562ChromatinTotal; type=broadPeak; md5sum=2e5244e92ca93bb5ba90b9b4e4dc1480; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562CytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000005; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562CytosolLongnonpolya; type=broadPeak; md5sum=d582665155a5db18ed91a57ff4d15992; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562CytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000006; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562CytosolLongpolya; type=broadPeak; md5sum=810da4f173e79e82f403a07fb3ea4902; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562NucleolusTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=nucleolus; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000015; dateSubmitted=2009-02-04; dateUnrestricted=2009-11-04; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562NucleolusTotal; type=broadPeak; md5sum=109ab65845fae7e2e19db72dab50002e; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562NucleoplasmTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=nucleoplasm; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000014; dateSubmitted=2009-03-10; dateUnrestricted=2009-12-10; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562NucleoplasmTotal; type=broadPeak; md5sum=fd6f6dcd00c2277fa0443821f8556ed5; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000007; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongnonpolya; type=broadPeak; md5sum=c16924a6cf2bc9041b07c18e694be644; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000008; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562NucleusLongpolya; type=broadPeak; md5sum=742c9665456540b9fbfc33e51e19d821; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsK562PolysomeLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=K562; localization=polysome; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000004; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsK562PolysomeLongnonpolya; type=broadPeak; md5sum=d57d5720f14e3c4b575424aa545751ce; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000020; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongnonpolya; type=broadPeak; md5sum=c46d346e80f589a89ee12ca04a09962b; size=9.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000021; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteCytosolLongpolya; type=broadPeak; md5sum=cbcae473510f24a89b58f5fd0748f0d0; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000022; dateSubmitted=2009-06-12; dateUnrestricted=2010-03-12; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongnonpolya; type=broadPeak; md5sum=a1510035a5cafd55dd694644180264f7; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000023; dateSubmitted=2009-06-12; dateUnrestricted=2010-03-12; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsKeratinocyteNucleusLongpolya; type=broadPeak; md5sum=bc9a229fbf65ef9e65d4c338e24f09ad; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsProstateCellLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=prostate; localization=cell; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000009; dateSubmitted=2008-11-24; dateUnrestricted=2009-08-24; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongnonpolya; type=broadPeak; md5sum=b60ed0bd591017e410692def40cdb32c; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipFiltTransfragsProstateCellLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=FiltTransfrags; cell=prostate; localization=cell; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000010; dateSubmitted=2008-11-24; dateUnrestricted=2009-08-24; subId=2121; tableName=wgEncodeAffyRnaChipFiltTransfragsProstateCellLongpolya; type=broadPeak; md5sum=0bc9c8a72e3c8f99cd8a4076009a027e; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsGm12878CellTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=GM12878; localization=cell; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000016; dateSubmitted=2009-03-10; dateUnrestricted=2009-12-10; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsGm12878CellTotal; type=broadPeak; md5sum=450cd35cb0dd12cf2f271ee8049fa0b8; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsGm12878CytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000012; dateSubmitted=2008-12-09; dateUnrestricted=2009-09-09; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongnonpolya; type=broadPeak; md5sum=1fe318245f0d982d17382b21772ab60a; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsGm12878CytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000002; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsGm12878CytosolLongpolya; type=broadPeak; md5sum=72fa517e36861521c41227861bdbc821; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsGm12878NucleolusTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=GM12878; localization=nucleolus; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000026; dateSubmitted=2009-08-27; dateUnrestricted=2010-05-27; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsGm12878NucleolusTotal; type=broadPeak; md5sum=73e76b24be5efac36920746e05788b45; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsGm12878NucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000003; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongnonpolya; type=broadPeak; md5sum=e835cc291ae66816e8943f8a35cbc82d; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsGm12878NucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000017; dateSubmitted=2009-04-01; dateUnrestricted=2010-01-01; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsGm12878NucleusLongpolya; type=broadPeak; md5sum=963f981d9b46ca791a305547a7f9d3aa; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsHepg2CytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000018; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongnonpolya; type=broadPeak; md5sum=41975e54d89a2d50809fefd54e34465e; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsHepg2CytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000019; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsHepg2CytosolLongpolya; type=broadPeak; md5sum=3c76db3cf15643b0aeb1970861970b7e; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsHepg2NucleolusTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=HepG2; localization=nucleolus; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000027; dateSubmitted=2009-08-27; dateUnrestricted=2010-05-27; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsHepg2NucleolusTotal; type=broadPeak; md5sum=f2c607ac4951430394946d6ac5123113; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsHepg2NucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000024; dateSubmitted=2009-07-17; dateUnrestricted=2010-04-17; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongnonpolya; type=broadPeak; md5sum=a5ce722c4485da5336921bcdbfc43b1e; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsHepg2NucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000025; dateSubmitted=2009-07-17; dateUnrestricted=2010-04-17; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsHepg2NucleusLongpolya; type=broadPeak; md5sum=c13256a76a34f047f7e1bbe1e7e54d58; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562CellTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=cell; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000011; dateSubmitted=2008-11-25; dateUnrestricted=2009-08-25; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562CellTotal; type=broadPeak; md5sum=e48a8787a71eababdb6e403091b182ae; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562ChromatinTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=chromatin; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000013; dateSubmitted=2009-01-09; dateUnrestricted=2009-10-09; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562ChromatinTotal; type=broadPeak; md5sum=c28df5ca4c27c400563faf23f4b34b2b; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562CytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000005; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562CytosolLongnonpolya; type=broadPeak; md5sum=5ca7a52323fd32a7f551053133261781; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562CytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000006; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562CytosolLongpolya; type=broadPeak; md5sum=e00718a075afe2a6140382d4ad03d1f9; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562NucleolusTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=nucleolus; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000015; dateSubmitted=2009-02-04; dateUnrestricted=2009-11-04; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562NucleolusTotal; type=broadPeak; md5sum=66b50b303ef6232260cc4122a477c564; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562NucleoplasmTotal.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=nucleoplasm; rnaExtract=total; origAssembly=hg18; dataVersion=ENCODE Feb 2009 Freeze; dccAccession=wgEncodeEH000014; dateSubmitted=2009-01-09; dateUnrestricted=2009-10-09; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562NucleoplasmTotal; type=broadPeak; md5sum=a8dd7bc1d955912e94483e7c25122d58; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562NucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000007; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562NucleusLongnonpolya; type=broadPeak; md5sum=468f3e30a0e436db8f9b449c4cd5c69a; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562NucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000008; dateSubmitted=2008-11-22; dateUnrestricted=2009-08-22; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562NucleusLongpolya; type=broadPeak; md5sum=feaf778819569eaf61716fac3f9da836; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsK562PolysomeLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=K562; localization=polysome; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000004; dateSubmitted=2008-11-21; dateUnrestricted=2009-08-21; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsK562PolysomeLongnonpolya; type=broadPeak; md5sum=8bca1cd0ae0691ee7e9f176369609e07; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000020; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongnonpolya; type=broadPeak; md5sum=89176eaaea87c333104434d20d10488a; size=9.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000021; dateSubmitted=2009-05-27; dateUnrestricted=2010-02-27; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsKeratinocyteCytosolLongpolya; type=broadPeak; md5sum=c27a35b233d10c1bc83d2e38f952355f; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000022; dateSubmitted=2009-06-12; dateUnrestricted=2010-03-12; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongnonpolya; type=broadPeak; md5sum=5d17826eb5392cacfd04d0128c3d0f9b; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE July 2009 Freeze; dccAccession=wgEncodeEH000023; dateSubmitted=2009-06-12; dateUnrestricted=2010-03-12; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsKeratinocyteNucleusLongpolya; type=broadPeak; md5sum=a03f8e7d051de3ad4c5676f34178adec; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsProstateCellLongnonpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=prostate; localization=cell; rnaExtract=longNonPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000009; dateSubmitted=2008-11-24; dateUnrestricted=2009-08-24; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsProstateCellLongnonpolya; type=broadPeak; md5sum=a4db5a27d52b111b9a613dcd0bda7ecd; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeAffyRnaChip/releaseLatest/wgEncodeAffyRnaChipTransfragsProstateCellLongpolya.broadPeak.gz project=wgEncode; grant=Gingeras; lab=Affy; composite=wgEncodeAffyRnaChip; dataType=RnaChip; view=Transfrags; cell=prostate; localization=cell; rnaExtract=longPolyA; origAssembly=hg18; dataVersion=ENCODE Nov 2008 Freeze; dccAccession=wgEncodeEH000010; dateSubmitted=2008-11-24; dateUnrestricted=2009-08-24; subId=2121; tableName=wgEncodeAffyRnaChipTransfragsProstateCellLongpolya; type=broadPeak; md5sum=0a7c911f040a37e7e3a3865e4e972431; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-04; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-04; subId=3448; labExpId=11011; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep1V2; type=bam; md5sum=b7d7d916256f7fbed062d62f8e638b0c; size=994M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-04; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-04; subId=3448; labExpId=11011; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep1V2; type=bai; md5sum=35c6c98b4fba7c6866dd70db77845edd; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3449; labExpId=11010; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep2V2; type=bam; md5sum=c25e4497f13790cfb1cb774af139f031; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3449; labExpId=11010; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dAlignsRep2V2; type=bai; md5sum=e26326ddacc5ba5cdf9c8adc1966d727; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dFastqRep1.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-04; dateResubmitted=2010-02-10; dateUnrestricted=2010-10-04; subId=1874; geoSampleAccession=GSM958730; labExpId=11011; type=fastq; md5sum=2ff540ecbc946ff623948c01e89a85bd; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dFastqRep2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-06; dateResubmitted=2010-02-10; dateUnrestricted=2010-10-06; subId=1874; geoSampleAccession=GSM958730; labExpId=11011; type=fastq; md5sum=5cd378ef1832aabfc8461dd1384514d3; size=2.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-04; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-04; subId=3448; geoSampleAccession=GSM958730; labExpId=11011; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep1V2; type=bam; md5sum=84e858ca0735e80e3f4d7849e9c090be; size=197M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-04; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-04; subId=3448; geoSampleAccession=GSM958730; labExpId=11011; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep1V2; type=bai; md5sum=7c42184af4a2fac5a468a0f9516b0d37; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3449; geoSampleAccession=GSM958730; labExpId=11010; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep2V2; type=bam; md5sum=26293fea65f5e28d1f460fca23661171; size=237M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3449; geoSampleAccession=GSM958730; labExpId=11010; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dSplicesRep2V2; type=bai; md5sum=c1a97a0db2d230ca4fad14fcdba5bc64; size=2.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UMinusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=GM12878; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6348; geoSampleAccession=GSM958730; labExpId=11011; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UMinusRawRep1V4; type=bigWig; md5sum=f37fa3493066587a50b17ffc394d32d7; size=31M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UMinusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=GM12878; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6349; geoSampleAccession=GSM958730; labExpId=11010; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UMinusRawRep2V4; type=bigWig; md5sum=7bc4828239ea17d7150170af857a7753; size=41M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UPlusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=GM12878; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6348; geoSampleAccession=GSM958730; labExpId=11011; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UPlusRawRep1V4; type=bigWig; md5sum=4478fcc2b27bca503c7259de48a997da; size=31M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UPlusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=GM12878; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000125; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6349; geoSampleAccession=GSM958730; labExpId=11010; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R1x75dTh1014UPlusRawRep2V4; type=bigWig; md5sum=58c0ff926915396ed71ccfb3d417e888; size=40M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3416; labExpId=10565; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep1V2; type=bam; md5sum=30b867ee186936262528423c7d8fecd2; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3416; labExpId=10565; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep1V2; type=bai; md5sum=a1b43071f778488fda7582e1616723b6; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3463; labExpId=10515; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep2V2; type=bam; md5sum=4e211666eebc50fed6118e7bf373b0fe; size=9.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3463; labExpId=10515; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200AlignsRep2V2; type=bai; md5sum=815b8a68fbea313bff7662bdd8fe1eab; size=6.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3572; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; type=gtf; md5sum=e9ea28c09e56c9328d75eac9e58e29b7; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3575; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; type=gtf; md5sum=33d5d464a6da68e31084a953bfa54d3a; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2010-07-14; dateResubmitted=2010-06-21; dateUnrestricted=2011-04-14; subId=1647; geoSampleAccession=GSM958728; labExpId=10565; type=fastq; md5sum=6bb7caefd719fcc0c04422ec2b3beab9; size=4.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200FastqRd1Rep2V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5121; geoSampleAccession=GSM958728; labExpId=10515; type=fastq; md5sum=b524c34849b3cc7623bc624115fdf849; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2010-07-14; dateResubmitted=2010-06-21; dateUnrestricted=2011-04-14; subId=1647; geoSampleAccession=GSM958728; labExpId=10565; type=fastq; md5sum=51c4d1679b0ad29888bea2b40e26364a; size=4.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200FastqRd2Rep2V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5136; geoSampleAccession=GSM958728; labExpId=10515; type=fastq; md5sum=27ad1e247688c9e2842f87797058c278; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3572; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; type=gtf; md5sum=df152c461336398592d7fa83133a02dd; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3575; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; type=gtf; md5sum=ddd6303d91b67a0ecac01a3fc3f6f668; size=1.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3572; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; type=gtf; md5sum=464eb5317f74fe716a2f40b3fe3f2cc4; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3575; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; type=gtf; md5sum=f7133ee0fad9f2a5f06510ef0a20b5bd; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5279; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; type=bigBed; md5sum=2a180edda48905e95310ea9851f65610; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5234; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; type=bigBed; md5sum=d4a6ca943cfdaaf36a2cc03c6f27255a; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3416; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep1V2; type=bam; md5sum=bc50918b17b37c531facded3671a7c94; size=871M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3416; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep1V2; type=bai; md5sum=ab25fea607a09bfc0b0b3a9404176628; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3463; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep2V2; type=bam; md5sum=a6f8f785dc00bc13c5a56fb8330dcd6e; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3463; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il200SplicesRep2V2; type=bai; md5sum=70a696691bf788f1aeb7e14aad3722a6; size=2.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3572; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; type=gtf; md5sum=7c0c92fb09ee3038bc951dfb54650878; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3575; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; type=gtf; md5sum=c78567112e59917fe8bb96719b2c0777; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3572; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; type=gtf; md5sum=835816c2c44ab289492c392f93ae3793; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3575; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; type=gtf; md5sum=516d10d03988fbcdad17449127be395f; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3572; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; type=gtf; md5sum=8deacbcf99623d8ea677dcdb5bbc1dad; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3575; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; type=gtf; md5sum=458495d56ea98459e89901e42db8c7d3; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3461; labExpId=10516; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il400AlignsRep2V2; type=bam; md5sum=b795de6855f4a9a159fcd17ceb7d5901; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3461; labExpId=10516; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il400AlignsRep2V2; type=bai; md5sum=b9d25e5856d5253f6d475b97cc89bb4e; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-17; subId=3532; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; type=gtf; md5sum=bb06f65243ff5bf3e16bcbe6349a2836; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400FastqRd1Rep2V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5137; geoSampleAccession=GSM958742; labExpId=10516; type=fastq; md5sum=386850da051486879d75f676027040e6; size=4.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400FastqRd2Rep2V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5138; geoSampleAccession=GSM958742; labExpId=10516; type=fastq; md5sum=78c19d5a5c0fc07d3734f62883b8016f; size=4.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-17; subId=3532; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; type=gtf; md5sum=36ff265758ef436c460cd363725de257; size=941K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-17; subId=3532; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; type=gtf; md5sum=33484341537282222a9492797a49e82a; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-17; subId=5278; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; type=bigBed; md5sum=b52b17e9aa4fc6634c694931a4a73870; size=3.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3461; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il400SplicesRep2V2; type=bam; md5sum=5a1ed642ee3842aa3b4618d223fea4d2; size=424M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3461; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Il400SplicesRep2V2; type=bai; md5sum=a35275ea9bd05227231c38d898ce995a; size=2.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-17; subId=3532; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; type=gtf; md5sum=16ecb91ad700e0e18583f8d3b212d44a; size=2.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-17; subId=3532; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; type=gtf; md5sum=be65f3e02d6d114e4210a5e6d13b8c2f; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Il400TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-17; subId=3532; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; type=gtf; md5sum=66a6bf88221afc958ea0ba2ccbd4a719; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6277; geoSampleAccession=GSM958728; labExpId=10565; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=41464ad5a124820f3e2ebb1480cbbd55; size=210M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000122; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6276; geoSampleAccession=GSM958728; labExpId=10515; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=b3a79785ba671d9626b77ba107e61798; size=303M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12878R2x75Th1014Il400USigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12878; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000137; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6243; geoSampleAccession=GSM958742; labExpId=10516; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12878R2x75Th1014Il400USigRep2V4; type=bigWig; md5sum=640a798dc5b97be74bbb2c0f84d97311; size=126M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3436; labExpId=11038; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep1V2; type=bam; md5sum=8601206e648441dea06b536b97381871; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3436; labExpId=11038; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep1V2; type=bai; md5sum=dfd1c803afacdafd96d42e73ee0b0479; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-14; dateUnrestricted=2011-12-14; subId=3437; labExpId=SL2971; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep2V2; type=bam; md5sum=b42c65ab6d04eb1000d2eb08987a9056; size=2.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-14; dateUnrestricted=2011-12-14; subId=3437; labExpId=SL2971; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200AlignsRep2V2; type=bai; md5sum=7393bcc9e383ce072fbce4576db02736; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-30; dateUnrestricted=2011-12-29; subId=3576; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; type=gtf; md5sum=622c09da744abb1593af2efcd06c3a38; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3665; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; type=gtf; md5sum=7aa897ff9b78d05ed1b796ca55061a03; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3436; geoSampleAccession=GSM958747; labExpId=11038; type=fastq; md5sum=80c729c4dc51d999b29f160fc0c3c0ed; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200FastqRd1Rep2V2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - Removed unexpected read indicator before /; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-14; dateResubmitted=2012-07-27; dateUnrestricted=2011-12-14; subId=7722; geoSampleAccession=GSM958747; labExpId=02971; labVersion=02971; type=fastq; md5sum=ddbfc402fb4be9a491adc4e0d0962899; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3436; geoSampleAccession=GSM958747; labExpId=11038; type=fastq; md5sum=cb57a6acca676e312a685df149895bc5; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200FastqRd2Rep2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-14; dateUnrestricted=2011-12-14; subId=4609; geoSampleAccession=GSM958747; labExpId=SL2971; labVersion=02971; type=fastq; md5sum=7ba263090dc325d5422abd68fb363561; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200FastqRd2Rep2V2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - Removed unexpected read indicator before /; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-14; dateResubmitted=2012-07-27; dateUnrestricted=2011-12-14; subId=7722; geoSampleAccession=GSM958747; labExpId=02971; labVersion=02971; type=fastq; md5sum=7fdee384087bc4dfb129280035dcf644; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-30; dateUnrestricted=2011-12-29; subId=3576; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; type=gtf; md5sum=151187a5de7feca4f734a1a5cf284bfe; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3665; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; type=gtf; md5sum=24757a64ea5c65f871cf06607c68a4a7; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-30; dateUnrestricted=2011-12-29; subId=3576; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; type=gtf; md5sum=8e8889ff6bce358b255dd565af7932d7; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3665; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; type=gtf; md5sum=02a0ee3742bea583079a5beb93412f5e; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-30; dateResubmitted=2011-12-22; dateUnrestricted=2011-12-29; subId=5281; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; type=bigBed; md5sum=e3647a3f628e18ccfb79db6a94bbb38f; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-02-19; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5280; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; type=bigBed; md5sum=b9b99d291907f4cc40d887a9f3577c34; size=3.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3436; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep1V2; type=bam; md5sum=76bf6fcbc697c870e2871ea7724dfae7; size=919M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3436; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep1V2; type=bai; md5sum=4db2f15ef0a74ac054341164664e6d21; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-14; dateUnrestricted=2011-12-14; subId=3437; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep2V2; type=bam; md5sum=d38a684b10152d9bd28388232be48f44; size=309M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-14; dateUnrestricted=2011-12-14; subId=3437; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Il200SplicesRep2V2; type=bai; md5sum=b133850585aaa3435fd33ff0a8ed9e9c; size=2.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-30; dateUnrestricted=2011-12-29; subId=3576; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; type=gtf; md5sum=7d6fb7764b1903f06c890935a7b9225c; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3665; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; type=gtf; md5sum=6086ee0db8058ab90a5e3ae9f554f413; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-30; dateUnrestricted=2011-12-29; subId=3576; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; type=gtf; md5sum=0411b1e4ca819dcb3bc2b1944da41f3f; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3665; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; type=gtf; md5sum=b7dad9d8354516e7bebd4fed29baf0a1; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-03-30; dateUnrestricted=2011-12-29; subId=3576; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; type=gtf; md5sum=c07c96b550dc2134b1e02e3e1e67960a; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3665; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; type=gtf; md5sum=a99d9505f5503a5c3f8ae99c9008e9c6; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6275; geoSampleAccession=GSM958747; labExpId=11038; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=6b36048e03b7e362fcb6d40b6555117f; size=202M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12891R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12891; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001423; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6274; geoSampleAccession=GSM958747; labExpId=SL2971; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12891R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=28deb7e7f53c31807200320e1a710cf1; size=138M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3441; labExpId=11039; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep1V2; type=bam; md5sum=b875bc2403e407855e14f8307b3689e6; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3441; labExpId=11039; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep1V2; type=bai; md5sum=a07562587f280f070de050099db4197a; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3438; labExpId=SL2970; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep2V2; type=bam; md5sum=f462987ea29143a367c71750afe06bb1; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3438; labExpId=SL2970; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep2V2; type=bai; md5sum=79b7a9b00dc17c9dfd17fd6b7c2c3f9b; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep3V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3439; labExpId=SL2973; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep3V2; type=bam; md5sum=e95070c17ae3c7da4ebb738023edba25; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep3V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3439; labExpId=SL2973; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200AlignsRep3V2; type=bai; md5sum=316c25d160c62cd4eb714a2a96c37b0c; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3577; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; type=gtf; md5sum=a39560ea5caeeebf2a106d5e4c17c6df; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-17; dateUnrestricted=2011-12-17; subId=3666; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; type=gtf; md5sum=09d4c85fc89de3d3880ea4c5f06e106a; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200ExonsGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3744; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; type=gtf; md5sum=448e6b34a1642b1c739310634b225a1b; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd1Rep1V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - Removed 424 unpaired reads from fastq files; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-21; dateResubmitted=2012-07-26; dateUnrestricted=2011-10-21; subId=7705; geoSampleAccession=GSM958748; labExpId=11039; type=fastq; md5sum=ca1931b862c414f1d7f84435e0f4cedc; size=3.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd1Rep2V2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - Removed unexpected read indicator before /; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-14; dateResubmitted=2012-07-27; dateUnrestricted=2011-12-14; subId=7723; geoSampleAccession=GSM958748; labExpId=02970; labVersion=02970; type=fastq; md5sum=9a78fe7a1607d9485ad713a934dc6671; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd1Rep3V2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - Removed unexpected read indicator before /; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-14; dateResubmitted=2012-07-27; dateUnrestricted=2011-12-14; subId=7724; geoSampleAccession=GSM958748; labExpId=02973; labVersion=02973; type=fastq; md5sum=1d4950bb36aa09738ae6dc9d541e280c; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3441; geoSampleAccession=GSM958748; labExpId=11039; type=fastq; md5sum=d20a75deb7ac79d1436c6ef092af6c9f; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd2Rep1V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - Removed 424 unpaired reads from fastq files; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-21; dateResubmitted=2012-07-26; dateUnrestricted=2011-10-21; subId=7705; geoSampleAccession=GSM958748; labExpId=11039; type=fastq; md5sum=3a6446afbd642fd320c2bac7b61268db; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd2Rep2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-14; dateUnrestricted=2011-12-14; subId=4607; geoSampleAccession=GSM958748; labExpId=SL2970; labVersion=02970; type=fastq; md5sum=1ed64d59246ea4bd66c8cc1598744d93; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd2Rep2V2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - Removed unexpected read indicator before /; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-14; dateResubmitted=2012-07-27; dateUnrestricted=2011-12-14; subId=7723; geoSampleAccession=GSM958748; labExpId=02970; labVersion=02970; type=fastq; md5sum=99f101b7e3304419e971ca069d538855; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd2Rep3.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-14; dateUnrestricted=2011-12-14; subId=4608; geoSampleAccession=GSM958748; labExpId=SL2973; labVersion=02973; type=fastq; md5sum=c94978a1b5d2846e38b4521b8a029602; size=2.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200FastqRd2Rep3V2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - Removed unexpected read indicator before /; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-14; dateResubmitted=2012-07-27; dateUnrestricted=2011-12-14; subId=7724; geoSampleAccession=GSM958748; labExpId=02973; labVersion=02973; type=fastq; md5sum=35d3b59e962fb365c9c0239154ced940; size=2.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3577; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; type=gtf; md5sum=dd3aa911617e46c0cfe7dfc4f7216367; size=932K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-17; dateUnrestricted=2011-12-17; subId=3666; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; type=gtf; md5sum=239afed59f7f1eff0f8e644e32d7d7fa; size=1.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200GeneDeNovoRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3744; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; type=gtf; md5sum=5757f581776759f734d89bd4a60da5f2; size=1.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3577; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; type=gtf; md5sum=32c468ab639fd1e042dd5ee34878f3d6; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-17; dateUnrestricted=2011-12-17; subId=3666; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; type=gtf; md5sum=fc1f369ccfae49bbaafad828e09c1d68; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200GeneGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3744; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; type=gtf; md5sum=5625be74467636618e7c53be64a6d97d; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5284; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; type=bigBed; md5sum=ece996243adc23bc7ed5b9e849ddd406; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-17; dateResubmitted=2011-12-22; dateUnrestricted=2011-12-17; subId=5282; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; type=bigBed; md5sum=32822e771a2f1f6cc654ee67d81fdd5f; size=3.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200JunctionsRep3V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5283; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; type=bigBed; md5sum=0868d79025e6cd8879fa42cd760bc316; size=3.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3441; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep1V2; type=bam; md5sum=b8a1fdf2698376e417dc1a904188fc39; size=758M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3441; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep1V2; type=bai; md5sum=b7bff76e55856b32e36eebf2fde4361c; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3438; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep2V2; type=bam; md5sum=6f2488d7085d8c13573bce2014dd35ca; size=352M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3438; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep2V2; type=bai; md5sum=5f8338829a1e4cf57c3bf1c05bc676a6; size=2.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep3V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3439; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep3V2; type=bam; md5sum=95b2c965412f7a1cd35f99e0bba4d3c2; size=339M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep3V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3439; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Il200SplicesRep3V2; type=bai; md5sum=41849a151ca64734fc52b0fdf769c3ac; size=2.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3577; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; type=gtf; md5sum=d48c021246447f5cc3156826c4acade3; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-17; dateUnrestricted=2011-12-17; subId=3666; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; type=gtf; md5sum=9b60fdf3305376edd454cb97de78f2f1; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TSSRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3744; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; type=gtf; md5sum=20984e2a00a4c29008e35f1fab4e2b03; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3577; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; type=gtf; md5sum=7520bfc7a2f20bd4c697ac823e2a6ba4; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-17; dateUnrestricted=2011-12-17; subId=3666; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; type=gtf; md5sum=14b8ed2239bc35f6d94f13d83e6d1ed1; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TranscriptDeNovoRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3744; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; type=gtf; md5sum=da7c75eeaf1c6f00f858bedf948da344; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3577; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; type=gtf; md5sum=81751f3bb56ca2c1cde24748d125bbe0; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-03-17; dateUnrestricted=2011-12-17; subId=3666; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; type=gtf; md5sum=b52f71203d9f43a63161bea1324c2bd5; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Il200TranscriptGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3744; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; type=gtf; md5sum=6afb939b3589e90afadf56f6ae01ddcf; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6273; geoSampleAccession=GSM958748; labExpId=11039; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=9a6917f13d90cdf628d2b505cb5161fa; size=199M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6272; geoSampleAccession=GSM958748; labExpId=SL2970; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=d53fc33946e709ec193ef5b706fe166d; size=150M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqGm12892R2x75Th1014Il200SigRep3V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=GM12892; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001424; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6271; geoSampleAccession=GSM958748; labExpId=SL2973; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqGm12892R2x75Th1014Il200SigRep3V4; type=bigWig; md5sum=6092c8311a0a1eff2301d2d5b39428bf; size=162M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3450; labExpId=10947; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep1V2; type=bam; md5sum=3c6b6a7da491d4a6a9460bf78d20dc4e; size=891M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3450; labExpId=10947; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep1V2; type=bai; md5sum=251d27bada4a0dd496cb95fe088398fa; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3451; labExpId=11009; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep2V2; type=bam; md5sum=401e74ccbcd897e7d9dd702ef2e2a8ce; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3451; labExpId=11009; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dAlignsRep2V2; type=bai; md5sum=90696c2bc33fe1f8cf3c8a23e9638e0c; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dFastqRep1.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1633; geoSampleAccession=GSM958737; labExpId=10947; type=fastq; md5sum=0b3c5c07b5ac34bb961b441745dbc6e8; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dFastqRep2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1874; geoSampleAccession=GSM958737; labExpId=11009; type=fastq; md5sum=f8d7f1c78cd33a55e5308b01b9384056; size=2.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3450; geoSampleAccession=GSM958737; labExpId=10947; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep1V2; type=bam; md5sum=4cf4b19a3e4465dbea1f51a8216fbd95; size=177M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3450; geoSampleAccession=GSM958737; labExpId=10947; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep1V2; type=bai; md5sum=287adc76cbc7aad9e9bb5c518718bcf9; size=2.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3451; geoSampleAccession=GSM958737; labExpId=11009; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep2V2; type=bam; md5sum=aa23f6e532a6adbc9536a487066670ab; size=316M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3451; geoSampleAccession=GSM958737; labExpId=11009; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dSplicesRep2V2; type=bai; md5sum=f76674c4442cd6e2257de211722328ea; size=2.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UMinusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-hESC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6350; geoSampleAccession=GSM958737; labExpId=10947; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UMinusRawRep1V4; type=bigWig; md5sum=d84ab9fdb76a8796b9a9b990007dc86b; size=29M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UMinusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-hESC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6351; geoSampleAccession=GSM958737; labExpId=11009; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UMinusRawRep2V4; type=bigWig; md5sum=09dffde3daa4dd3138de4e3a689d4924; size=42M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UPlusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-hESC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6350; geoSampleAccession=GSM958737; labExpId=10947; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UPlusRawRep1V4; type=bigWig; md5sum=f046924bcc462e7868950f5fb456a17c; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UPlusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-hESC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000132; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6351; geoSampleAccession=GSM958737; labExpId=11009; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR1x75dTh1014UPlusRawRep2V4; type=bigWig; md5sum=5eca011ec0a4675e87273ac1bb85a5d4; size=42M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3464; labExpId=11286; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep1V2; type=bam; md5sum=c98813c9577fa37418f1ae5841964162; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3464; labExpId=11286; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep1V2; type=bai; md5sum=1f4f91ad9b262e5407c0e194296a6163; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3409; labExpId=11288; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep2V2; type=bam; md5sum=a410a257d7a6ebeb3673e2531934e375; size=4.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3409; labExpId=11288; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep2V2; type=bai; md5sum=6efe87b2c66bb0a28eb15266c7ea2139; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep3V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3417; labExpId=11289; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep3V2; type=bam; md5sum=e776b497549eb6c7757516fadc29c3b3; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep3V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3417; labExpId=11289; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep3V2; type=bai; md5sum=04b24bf40443c952e45bfb8bbaf86540; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep4V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3410; labExpId=10874; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep4V2; type=bam; md5sum=4e0a69e803e9a920c988f7bce1553a77; size=3.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep4V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3410; labExpId=10874; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200AlignsRep4V2; type=bai; md5sum=ab082addc7ebb47572f6bc7cb538bbc7; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3578; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; type=gtf; md5sum=c71ebbad790070b73af53e3bf15b3da2; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3579; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; type=gtf; md5sum=21d698ca5ec81cd7951f23690134871e; size=8.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200ExonsGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3580; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; type=gtf; md5sum=c6c4852d82f1b2e83733c918c8f60e0e; size=8.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200ExonsGencV3cRep4V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3581; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; type=gtf; md5sum=78d23cd1deb7b2b6b0f4f77fb6f88f5d; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1670; geoSampleAccession=GSM958733; labExpId=11286; type=fastq; md5sum=618f5ee048b9f2abe7e2e8e0a96e7b61; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1668; geoSampleAccession=GSM958733; labExpId=11288; type=fastq; md5sum=486ac5301a47ab617ebaf0cf9fc841a5; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd1Rep3.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1667; geoSampleAccession=GSM958733; labExpId=11289; type=fastq; md5sum=895e5173c69c92db7c41d9d84858dc84; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd1Rep4.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-15; dateResubmitted=2010-01-15; dateUnrestricted=2010-10-14; subId=1666; geoSampleAccession=GSM958733; labExpId=10874; type=fastq; md5sum=0e7cce805f1d78c50c4a7f1e1485decf; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=1670; geoSampleAccession=GSM958733; labExpId=11286; type=fastq; md5sum=c51771a4f8db428f15c7a88c43efd254; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1668; geoSampleAccession=GSM958733; labExpId=11288; type=fastq; md5sum=0d28ecd7d3b692cee9b5143a44cfde30; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd2Rep3.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=1667; geoSampleAccession=GSM958733; labExpId=11289; type=fastq; md5sum=1e57b7fa9dcdaf326ffa5af00eca65d5; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200FastqRd2Rep4.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-15; dateResubmitted=2010-01-15; dateUnrestricted=2010-10-14; subId=1666; geoSampleAccession=GSM958733; labExpId=10874; type=fastq; md5sum=255330a0214525aa1da4b656f25d7421; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3578; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; type=gtf; md5sum=3f278534f058b8131f0d53a6c10beca9; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3579; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; type=gtf; md5sum=9f473801a82be23a7db0e23764021d2b; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneDeNovoRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3580; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; type=gtf; md5sum=dcbcf4566331459349abde79e40fa53c; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneDeNovoRep4V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3581; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; type=gtf; md5sum=48fa2b8532590db61eecc5ce6ba7dfc1; size=987K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3578; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; type=gtf; md5sum=b3cc1b65f392eb1dc1547b3eccfa13be; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3579; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; type=gtf; md5sum=4ad2a3d3245710d87ee268521dbc9c5c; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3580; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; type=gtf; md5sum=f768ed23c1f0849b108d10fe107d7ff7; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200GeneGencV3cRep4V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3581; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; type=gtf; md5sum=294cc526433c34406500b57803cb9b67; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5287; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; type=bigBed; md5sum=c7f639ebcc758267d8b9715ca735001c; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5288; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; type=bigBed; md5sum=708422662919413bc6eb3c96d46cb948; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200JunctionsRep3V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5289; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; type=bigBed; md5sum=4e9b0ec625c97977ab13ca59b716930c; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200JunctionsRep4V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5285; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; type=bigBed; md5sum=fef6bda7c28bf0cd7b96c8088f1ff4b3; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3464; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep1V2; type=bam; md5sum=1d5de812ce6da76d0930148451c9df7c; size=787M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3464; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep1V2; type=bai; md5sum=034616f0c3d4dfbca402a366a023e643; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3409; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep2V2; type=bam; md5sum=9639b934c03483ed79225c0a922598f0; size=798M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3409; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep2V2; type=bai; md5sum=897b1463a269c34a7b7a7c877e4bd74c; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep3V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3417; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep3V2; type=bam; md5sum=f37195b52920dd494edb4a053f39db69; size=773M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep3V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-13; subId=3417; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep3V2; type=bai; md5sum=e491e48dfc95dc9a77cddb9e41e89018; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep4V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3410; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep4V2; type=bam; md5sum=bfede33e27558171bc6e11e116225bd8; size=558M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep4V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3410; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il200SplicesRep4V2; type=bai; md5sum=b188968da362e01582a3b653afc90197; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3578; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; type=gtf; md5sum=d66bd9922dcbc803610698539e6585b4; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3579; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; type=gtf; md5sum=57ea40f71ae0c22b80ba63da64e31766; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TSSRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3580; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; type=gtf; md5sum=ee14787e2ee0eb074f2864b26a9402fa; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TSSRep4V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3581; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; type=gtf; md5sum=cdecb80b9941704158da0f124e5ca267; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3578; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; type=gtf; md5sum=0f74f62b29d6416b825df5f94a41c764; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3579; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; type=gtf; md5sum=a5a08242ed5d093aaf562e180eabc958; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptDeNovoRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3580; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; type=gtf; md5sum=90a896c3f16049132e75cd9e7942f1f0; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptDeNovoRep4V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3581; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; type=gtf; md5sum=f600becf0c7fa2fef0feb2517a2ba002; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3578; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; type=gtf; md5sum=ef635317d76049af656dfb5b868c5b50; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3579; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; type=gtf; md5sum=eba7c1ff6afbed007dc609a12dc52b04; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3580; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; type=gtf; md5sum=87cf50a54d7fb960f117db2950fb5f04; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il200TranscriptGencV3cRep4V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3581; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; type=gtf; md5sum=d40d77d4bdd953a22de9bf48d247eeeb; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3462; labExpId=10876; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il400AlignsRep1V2; type=bam; md5sum=66abda0e9463837f62084fb7db7f2039; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3462; labExpId=10876; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il400AlignsRep1V2; type=bai; md5sum=de83149535d75004e32a898fa1b18832; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3571; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; type=gtf; md5sum=33138384cdae36e64d571c15c02d7462; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2010-01-15; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-14; subId=1669; geoSampleAccession=GSM958743; labExpId=10876; type=fastq; md5sum=22165a6c61f8cd4b5486da759e3ad9be; size=3.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2010-01-15; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-14; subId=1669; geoSampleAccession=GSM958743; labExpId=10876; type=fastq; md5sum=2053e9573bbabb24de68da503dc41e72; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3571; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; type=gtf; md5sum=27e254a0d43d8adf39f259822d03d9bd; size=936K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3571; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; type=gtf; md5sum=80da1eaec7237dab5aef4da84830359b; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-02-19; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5286; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; type=bigBed; md5sum=420514f14d4c47dc00c75832d348f446; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3462; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il400SplicesRep1V2; type=bam; md5sum=bd17b339a2bee1732bc56cbeb38e3861; size=593M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2010-01-15; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3462; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Il400SplicesRep1V2; type=bai; md5sum=edd57aa8b3c501b6ac3a01f1da318e40; size=2.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3571; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; type=gtf; md5sum=8125aebab9f97d2f2183ff2fc4c0ea02; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3571; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; type=gtf; md5sum=71a915b089c18abac20d63f3ba2a1064; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Il400TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3571; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; type=gtf; md5sum=1b41b37d6b84478e362458cdfe98637b; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6269; geoSampleAccession=GSM958733; labExpId=11286; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=b3446f00d2f8a30106e58f355c319a6d; size=183M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6268; geoSampleAccession=GSM958733; labExpId=11288; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=96affc7571a63ebe43310e084ef99ede; size=184M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep3V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6267; geoSampleAccession=GSM958733; labExpId=11289; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep3V4; type=bigWig; md5sum=16f749045acd1c4506153016d8eadd68; size=181M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep4V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=4; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000128; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6266; geoSampleAccession=GSM958733; labExpId=10874; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il200SigRep4V4; type=bigWig; md5sum=cfecf521e746be262c060d5254d0a9e9; size=160M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il400SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=400; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000138; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6278; geoSampleAccession=GSM958743; labExpId=10876; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqH1hescR2x75Th1014Il400SigRep1V4; type=bigWig; md5sum=3cab3f7690217ffbfcde842ffd61e5cc; size=115M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3474; labExpId=12096; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep1V2; type=bam; md5sum=34a00a4967798a37486729b287154b38; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3474; labExpId=12096; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep1V2; type=bai; md5sum=0869164d5f267563bb44d5b27b65159f; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3475; labExpId=12097; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep2V2; type=bam; md5sum=6ded65a8d81d53743b63158b70893549; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3475; labExpId=12097; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200AlignsRep2V2; type=bai; md5sum=c276d637fb757b93bdfd1ebf26e9192f; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3582; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; type=gtf; md5sum=ebd8989f154e5e34dc7a9aa9e5bf7053; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3583; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; type=gtf; md5sum=fe95d8b88b21e537ba47029892ee71a6; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3474; geoSampleAccession=GSM958749; labExpId=12096; type=fastq; md5sum=7be9775795bc68cd82ef5f47a140e7f8; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3475; geoSampleAccession=GSM958749; labExpId=12097; type=fastq; md5sum=4912e2df4569ae27537b53acb6a6aca7; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3474; geoSampleAccession=GSM958749; labExpId=12096; type=fastq; md5sum=95ff2bef7738bbcdd506a1c19c0149c2; size=7.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3475; geoSampleAccession=GSM958749; labExpId=12097; type=fastq; md5sum=d0722e6cfcffada8c04b4c93708249bb; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3582; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; type=gtf; md5sum=d4dc01a68a78e42af9a25ca12bdba494; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3583; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; type=gtf; md5sum=463cb8d8bb11a29ea4b4f82f8c7f9921; size=1.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3582; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; type=gtf; md5sum=3c76e402f28536a79c877c0c5aebd9b7; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3583; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; type=gtf; md5sum=bbf8d46a7afa80f70405d0bdcae03d68; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5290; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; type=bigBed; md5sum=ef081675a442b1c18580858672069fd5; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5291; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; type=bigBed; md5sum=0a1bd930f6423e5f800e308a2bee937a; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3474; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep1V2; type=bam; md5sum=b1c98e599d3267d3fc180d398e39b9b0; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3474; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep1V2; type=bai; md5sum=d679189fca4886cec38d21f75ee99baf; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3475; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep2V2; type=bam; md5sum=d5c96023912ae5f31817fbfca973e9c0; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3475; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Il200SplicesRep2V2; type=bai; md5sum=d67a8c0dab93beff7950d5c70edf704a; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3582; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; type=gtf; md5sum=c89c6c15ba4079d5e4d208789a47c2f7; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3583; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; type=gtf; md5sum=b724895c48d167025527f04c483b10c1; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3582; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; type=gtf; md5sum=e8b7053889cb74b52163d39666e0fb2b; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3583; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; type=gtf; md5sum=a16772603e298f0b59e40b849939a173; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3582; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; type=gtf; md5sum=a6113756afa64acd21d081e74569bac5; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3583; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; type=gtf; md5sum=8486af5dc1dc200cb39ad5b2b5ec5a67; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6265; geoSampleAccession=GSM958749; labExpId=12096; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=605c379cee663c1e75fdc882a9cd6dca; size=187M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHct116R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HCT-116; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001425; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6264; geoSampleAccession=GSM958749; labExpId=12097; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHct116R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=744e69bf87bcac918f08b7bec40d89db; size=226M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3452; labExpId=11208; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep1V2; type=bam; md5sum=6ad12d866a26c1b6a37b310ebd788ad1; size=501M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3452; labExpId=11208; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep1V2; type=bai; md5sum=13a263412fb9c9bdc8f037df6bf6a274; size=3.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3453; labExpId=11207; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep2V2; type=bam; md5sum=857438513e376d2558253af8387b71be; size=606M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3453; labExpId=11207; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dAlignsRep2V2; type=bai; md5sum=1f8e5f8eb8b3b9d2d5afbbb42fadf4ec; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dFastqRep1.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1634; geoSampleAccession=GSM958739; labExpId=11208; type=fastq; md5sum=eeb166a5b043e44e9589c0b7c4f956c3; size=907M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dFastqRep2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1635; geoSampleAccession=GSM958739; labExpId=11207; type=fastq; md5sum=d1bbe9af8e9481bf277c8671247aeb0e; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3452; geoSampleAccession=GSM958739; labExpId=11208; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep1V2; type=bam; md5sum=04eaef8ed2a4c788486752976bff1799; size=100M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3452; geoSampleAccession=GSM958739; labExpId=11208; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep1V2; type=bai; md5sum=929afdbc95ae5e50fcd9b218132551c9; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3453; geoSampleAccession=GSM958739; labExpId=11207; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep2V2; type=bam; md5sum=54d6a2a677bf445d78ffbf9f57ded488; size=123M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3453; geoSampleAccession=GSM958739; labExpId=11207; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dSplicesRep2V2; type=bai; md5sum=1d97b9d8786a66bb1d0371242af2dd6a; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UMinusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=HeLa-S3; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6354; geoSampleAccession=GSM958739; labExpId=11208; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UMinusRawRep1V4; type=bigWig; md5sum=998532b3eb2e4915fc7bb305310dda9f; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UMinusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=HeLa-S3; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6355; geoSampleAccession=GSM958739; labExpId=11207; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UMinusRawRep2V4; type=bigWig; md5sum=1bb7aea844d7bcbbd1f232717fa9aeb0; size=27M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UPlusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=HeLa-S3; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6354; geoSampleAccession=GSM958739; labExpId=11208; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UPlusRawRep1V4; type=bigWig; md5sum=7b73bba7bc3e3ed2a520b95293751089; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UPlusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=HeLa-S3; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000134; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6355; geoSampleAccession=GSM958739; labExpId=11207; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R1x75dTh1014UPlusRawRep2V4; type=bigWig; md5sum=8c68652122e00eb4507ee1f148072b58; size=27M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3418; labExpId=10881; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep1V2; type=bam; md5sum=7aec375011d0161d6aa00cf6ef78168b; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3418; labExpId=10881; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep1V2; type=bai; md5sum=a2b5be64d6e1167613d7a866db0130f0; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3465; labExpId=10882; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep2V2; type=bam; md5sum=355dbee232bc44418ac302bbb8a70dbf; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3465; labExpId=10882; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200AlignsRep2V2; type=bai; md5sum=4aa2d30f0dc3c5972cbb61ddbccdce52; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3588; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; type=gtf; md5sum=8ffca98591083a944ff468bc20eb2479; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3589; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; type=gtf; md5sum=2d023afa308bdd5b58665d0b1a5a0544; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1663; geoSampleAccession=GSM958735; labExpId=10881; type=fastq; md5sum=ac841c2bd1040b8d9c33b835ee73fd54; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1662; geoSampleAccession=GSM958735; labExpId=10882; type=fastq; md5sum=8b4e2325aaa0e93a56d512c48c030c26; size=4.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1663; geoSampleAccession=GSM958735; labExpId=10881; type=fastq; md5sum=6bba7f69bfe0cedcd7c1ff01a4b044bf; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1662; geoSampleAccession=GSM958735; labExpId=10882; type=fastq; md5sum=b0c95c0d38374fbc6dd9f60e30e7cca7; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3588; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; type=gtf; md5sum=46d0b7acf8b499a379f7e2fab9fc395f; size=962K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3589; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; type=gtf; md5sum=0f3235a8ab7398e7ecc3fec2d129c6d1; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3588; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; type=gtf; md5sum=3309cc796c55d9529df410a9fa125928; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3589; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; type=gtf; md5sum=15c345ecc4dc756d92faf20e37f4d86c; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5296; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; type=bigBed; md5sum=46635f52b56ee3e113009afa5bb881b9; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5297; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; type=bigBed; md5sum=be38198756c8f9294e2bd38fe461e206; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3418; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep1V2; type=bam; md5sum=bb04716ad55e6bc1fc13908b572ecfdd; size=569M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3418; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep1V2; type=bai; md5sum=4e54a9347c25e75fa454dd684141e9e2; size=2.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3465; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep2V2; type=bam; md5sum=2d1393f563e27fdef545e28f105b152c; size=863M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3465; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Il200SplicesRep2V2; type=bai; md5sum=8fe19068876022dd2d78ee794cbd1c92; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3588; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; type=gtf; md5sum=e95112769ef97120545e6a0b3e5a1dc3; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3589; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; type=gtf; md5sum=2db29bf2a3a5768f1f282b346ca21718; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3588; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; type=gtf; md5sum=c4c952b6fbf79984642e7e1fcccf04e5; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3589; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; type=gtf; md5sum=1b8a54dfe72dd479bc0617389422cf73; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3588; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; type=gtf; md5sum=ad57de084f12e95972bf5dd016c5b791; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3589; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; type=gtf; md5sum=7ce45175462e557d550f55be34db910c; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6259; geoSampleAccession=GSM958735; labExpId=10881; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=a1b162e27140c5b624d612664eb8e4b8; size=163M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHelas3R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000130; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6258; geoSampleAccession=GSM958735; labExpId=10882; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHelas3R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=4a02e545384cc9aee6d7c41fb8f035fe; size=207M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep1V3.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V3 - Replace conflicting md5sums; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-09-08; dateUnrestricted=2010-10-14; subId=4798; labExpId=11210; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep1V3; type=bam; md5sum=cf087561321957c34bcd80ca60d830f5; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep1V3.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V3 - Replace conflicting md5sums; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-09-08; dateUnrestricted=2010-10-14; subId=4798; labExpId=11210; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep1V3; type=bai; md5sum=8b53dca85af15bfda5807682cd957092; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep2V3.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V3 - Replace conflicting md5sums; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-09-08; dateUnrestricted=2010-10-14; subId=4797; labExpId=11209; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep2V3; type=bam; md5sum=838a7d07cd08763fa6a61bedcd1a82c9; size=856M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep2V3.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V3 - Replace conflicting md5sums; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-09-08; dateUnrestricted=2010-10-14; subId=4797; labExpId=11209; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dAlignsRep2V3; type=bai; md5sum=09c331e0fc9a06c7e235d7aedcb8c2f9; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dFastqRep1.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1636; geoSampleAccession=GSM958740; labExpId=11210; type=fastq; md5sum=4ddf86e54e0d82a66840d366124d8c4d; size=2.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dFastqRep2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1638; geoSampleAccession=GSM958740; labExpId=11209; type=fastq; md5sum=5041d82fe06f498fb762487f7137445a; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3454; geoSampleAccession=GSM958740; labExpId=11210; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep1V2; type=bam; md5sum=ecb7fb96775ccbab8033554234282f3f; size=301M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-14; subId=3454; geoSampleAccession=GSM958740; labExpId=11210; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep1V2; type=bai; md5sum=a9e243707d48c928fd3547c71c082c48; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3455; geoSampleAccession=GSM958740; labExpId=11209; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep2V2; type=bam; md5sum=ec3ef47efd4e156ae096aacc5fc5369d; size=253M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3455; geoSampleAccession=GSM958740; labExpId=11209; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dSplicesRep2V2; type=bai; md5sum=3209acd661d774efe56edfa20c126f90; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UMinusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=HepG2; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6356; geoSampleAccession=GSM958740; labExpId=11210; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UMinusRawRep1V4; type=bigWig; md5sum=7cdb8ca0da91f2b82cd42788e29d92f2; size=32M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UMinusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=HepG2; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6357; geoSampleAccession=GSM958740; labExpId=11209; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UMinusRawRep2V4; type=bigWig; md5sum=aa58d67bab9fc717094a980de346ef69; size=28M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UPlusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=HepG2; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6356; geoSampleAccession=GSM958740; labExpId=11210; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UPlusRawRep1V4; type=bigWig; md5sum=d47c42f3ee5fa83131902ea810f20235; size=32M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UPlusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=HepG2; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000135; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6357; geoSampleAccession=GSM958740; labExpId=11209; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R1x75dTh1014UPlusRawRep2V4; type=bigWig; md5sum=b9e0e8b271246106275fdb895ea3df62; size=29M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-12; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-11; subId=3466; labExpId=10878; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep1V2; type=bam; md5sum=e6027affb5310fb9175806906132ae0d; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-12; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-11; subId=3466; labExpId=10878; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep1V2; type=bai; md5sum=7d0ce53f821201eafb884de615c83658; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-22; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-22; subId=3467; labExpId=10879; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep2V2; type=bam; md5sum=a2f89cf26fcb7d3f07bc74ba6a21e0bf; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-22; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-22; subId=3467; labExpId=10879; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200AlignsRep2V2; type=bai; md5sum=bb95ed70d41b7c57de4129ff031672d7; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3590; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; type=gtf; md5sum=7e17e170b718706bd09635fe96dfbb1f; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3591; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; type=gtf; md5sum=9c592b6a65219aa33f2a7540a0a07900; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-12; dateResubmitted=2010-01-12; dateUnrestricted=2010-10-11; subId=1661; geoSampleAccession=GSM958732; labExpId=10878; type=fastq; md5sum=9b64b6e77b31420cb9c6b43a9992ffa4; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-22; dateResubmitted=2010-01-22; dateUnrestricted=2010-10-22; subId=1660; geoSampleAccession=GSM958732; labExpId=10879; type=fastq; md5sum=7bb086e02f38e86bc54517056c3c3a5b; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-12; dateResubmitted=2010-01-12; dateUnrestricted=2010-10-11; subId=1661; geoSampleAccession=GSM958732; labExpId=10878; type=fastq; md5sum=1eaa731e3060390920def92de527c39b; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-22; dateResubmitted=2010-01-22; dateUnrestricted=2010-10-22; subId=1660; geoSampleAccession=GSM958732; labExpId=10879; type=fastq; md5sum=187d689352b61d09e954f0d510a1bda3; size=5.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3590; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; type=gtf; md5sum=307f3f0cf4f4ca3300ef5b39a9d78541; size=911K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3591; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; type=gtf; md5sum=f4b4b8b89bc157646933d69bfa0e5b8a; size=984K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3590; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; type=gtf; md5sum=d2156f139cdd7b2eea47cfbde9a00c14; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3591; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; type=gtf; md5sum=19ac6edfeb690e3145def6df223d6ffc; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5298; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; type=bigBed; md5sum=675a65b6ff090bf54b91b9340ad89b64; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5299; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; type=bigBed; md5sum=bb25f5a4aaebe2731d9ee43a2d4acff5; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-12; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-11; subId=3466; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep1V2; type=bam; md5sum=716b0304c6826d6eec9f056a2a6111c9; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-12; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-11; subId=3466; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep1V2; type=bai; md5sum=60a3fd3fbcd4ad2d4c006744bc33c2c5; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-22; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-22; subId=3467; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep2V2; type=bam; md5sum=801604e36f69354a80d22a22b3e99e00; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2010-01-22; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-22; subId=3467; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Il200SplicesRep2V2; type=bai; md5sum=ce6575149e44635177ecb7ae7f5ac3de; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3590; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; type=gtf; md5sum=84b098b5a0b1be586a9490d704a36c6d; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3591; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; type=gtf; md5sum=060b742f4928588648943280f72afd23; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3590; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; type=gtf; md5sum=3c0d1661f8a40bf821f58743e55da46e; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3591; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; type=gtf; md5sum=7a395824a160f9ef1013e840f146ee9e; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3590; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; type=gtf; md5sum=618e4c8344400e48386c93f21de3eeef; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3591; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; type=gtf; md5sum=8186a27e795b042287e1148e3b1aee06; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6257; geoSampleAccession=GSM958732; labExpId=10878; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=ac40996bbdd0c0438168c5aab5473766; size=183M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHepg2R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000127; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6256; geoSampleAccession=GSM958732; labExpId=10879; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHepg2R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=c63b25f38723d211ef77e8b1250b4cbd; size=199M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3468; labExpId=11584; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep1V2; type=bam; md5sum=76c6099c1ce24acc59335f6e31354698; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3468; labExpId=11584; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep1V2; type=bai; md5sum=9bcae5aa5cb93d3a6ea95e2e5d312478; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3469; labExpId=11585; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep2V2; type=bam; md5sum=536fc38bd41cd24fba14271a2b9aea57; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3469; labExpId=11585; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200AlignsRep2V2; type=bai; md5sum=8da33db226f90653a9c371e246bab4c8; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3584; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; type=gtf; md5sum=45c27016c9041f6398211257a331fd90; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3585; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; type=gtf; md5sum=84c1b509651697c309858aff394ed582; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1907; geoSampleAccession=GSM958744; labExpId=11584; type=fastq; md5sum=70049c16aff4446a473f1bdbbd3a9846; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1908; geoSampleAccession=GSM958744; labExpId=11585; type=fastq; md5sum=f09c61a04a82906c092df0437e74c52c; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1907; geoSampleAccession=GSM958744; labExpId=11584; type=fastq; md5sum=01ee32f85f02b8e4449075b5ded2f1ac; size=4.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1908; geoSampleAccession=GSM958744; labExpId=11585; type=fastq; md5sum=85b8477a09a39f5b620a87132edaaf6b; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3584; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; type=gtf; md5sum=128b6966045b3703ab4361afa98f81ad; size=826K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3585; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; type=gtf; md5sum=9f78fe778c0b5d6e4c1e17d00abdb1d4; size=830K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3584; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; type=gtf; md5sum=29ed5785f0de73eb60bdc8b9b0b2faf9; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3585; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; type=gtf; md5sum=47ff0fe86774603a76324509aef0ed5d; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5292; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; type=bigBed; md5sum=4a09c2dd8c9f93cffce7a04a87c93562; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5293; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; type=bigBed; md5sum=1d9b9bec86c99583b0f57ae381c401f5; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3468; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep1V2; type=bam; md5sum=21f7b4a09370c7732939c476ebb1a871; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3468; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep1V2; type=bai; md5sum=659639e302916e6a7c58e7036f592089; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3469; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep2V2; type=bam; md5sum=33934ac8aa13e7b38da48a1602328948; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3469; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Il200SplicesRep2V2; type=bai; md5sum=792ca88a3ced81e942c6fd24d4e28cbf; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3584; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; type=gtf; md5sum=e1789f8df3101eaeeffd83c390e0d732; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3585; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; type=gtf; md5sum=0fa074b40317b33111329ee860f45806; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3584; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; type=gtf; md5sum=bffa02002543426efc1784028793d2f2; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3585; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; type=gtf; md5sum=e8bd486aa37683f133732e34b3c314bd; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3584; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; type=gtf; md5sum=dfc8a56eadec71f012c1ac8dd782d856; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3585; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; type=gtf; md5sum=1147472b2e7bce92102e9b2b2c8d6f10; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6263; geoSampleAccession=GSM958744; labExpId=11584; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=e0c3f7d68ff6997b5e74a0c43ccd5403; size=171M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHsmmR2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001420; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6262; geoSampleAccession=GSM958744; labExpId=11585; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHsmmR2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=327c10dc6dd82c2e5792d73813dbe9c7; size=178M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3456; labExpId=11206; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep1V2; type=bam; md5sum=923812c5c3a7938b2ce7a3f4eb9f8db3; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3456; labExpId=11206; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep1V2; type=bai; md5sum=7bfa2235b23f05c71d6ff4209d0defc9; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3457; labExpId=11205; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep2V2; type=bam; md5sum=d0fcf94d7d3ac10e60e1e7b7c935a876; size=434M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3457; labExpId=11205; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dAlignsRep2V2; type=bai; md5sum=79d36868185961b5695ad4b415955cb4; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dFastqRep1.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1639; geoSampleAccession=GSM958738; labExpId=11206; type=fastq; md5sum=9dd06134e9ab2105cb57ad69cc23f13f; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dFastqRep2.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1645; geoSampleAccession=GSM958738; labExpId=11205; type=fastq; md5sum=5bc9a27bd35f6a5cb24eb4c52914e360; size=884M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3456; geoSampleAccession=GSM958738; labExpId=11206; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep1V2; type=bam; md5sum=667c9cacf7150649650dae4026f33d2b; size=263M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3456; geoSampleAccession=GSM958738; labExpId=11206; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep1V2; type=bai; md5sum=1ed1363116448f112dc2fa41784d1973; size=2.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3457; geoSampleAccession=GSM958738; labExpId=11205; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep2V2; type=bam; md5sum=bff9a47403b3b689071b49903950431b; size=104M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3457; geoSampleAccession=GSM958738; labExpId=11205; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dSplicesRep2V2; type=bai; md5sum=b56ae424f1489b868128d737f6f8de16; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UMinusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=HUVEC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6352; geoSampleAccession=GSM958738; labExpId=11206; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UMinusRawRep1V4; type=bigWig; md5sum=97e5c43eb6b2934d0ab4f69a3439cf5c; size=33M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UMinusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=HUVEC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6353; geoSampleAccession=GSM958738; labExpId=11205; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UMinusRawRep2V4; type=bigWig; md5sum=d8be96747aa55460a0560db00cf92d60; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UPlusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=HUVEC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6352; geoSampleAccession=GSM958738; labExpId=11206; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UPlusRawRep1V4; type=bigWig; md5sum=e515f657ea24194ea1af5639acf3a37e; size=32M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UPlusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=HUVEC; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000133; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6353; geoSampleAccession=GSM958738; labExpId=11205; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR1x75dTh1014UPlusRawRep2V4; type=bigWig; md5sum=0b3856fa998a1c05b61a67d7f4d6b4fd; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3470; labExpId=10883; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep1V2; type=bam; md5sum=994c1089194c3fc735dcfb2a3e2d8aa9; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3470; labExpId=10883; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep1V2; type=bai; md5sum=b0949131457af254990eb860bb000abf; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3471; labExpId=10885; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep2V2; type=bam; md5sum=2cc9fdb535905e17682cae7efc9873a8; size=4.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3471; labExpId=10885; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200AlignsRep2V2; type=bai; md5sum=215779942f4c1bd117a3b8ff7dbcd9ab; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3586; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; type=gtf; md5sum=26548d11c3499be60c41c645ee7259a1; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3587; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; type=gtf; md5sum=14698761eba6a3977124a24b910e2ab0; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1665; geoSampleAccession=GSM958734; labExpId=10883; type=fastq; md5sum=3c88bfe058d345627b19360c2cfd296f; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1664; geoSampleAccession=GSM958734; labExpId=10885; type=fastq; md5sum=e5005bcbedb456ec37693ef66ca4d945; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1665; geoSampleAccession=GSM958734; labExpId=10883; type=fastq; md5sum=748f7f1cfbeba2d58c3ec2e0ef5c6fe7; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1664; geoSampleAccession=GSM958734; labExpId=10885; type=fastq; md5sum=325c828fb2c63a84af9a12f546563705; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3586; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; type=gtf; md5sum=e1ccc8257ebf2a18a49f1e973b3c5bae; size=841K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3587; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; type=gtf; md5sum=3308246cfc40ed06aca54621c0bca77b; size=733K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3586; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; type=gtf; md5sum=dcc597f21e2267774761b2f17095c33c; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3587; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; type=gtf; md5sum=1b8c7c0bbf347956601d1aa054f1dbe0; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5294; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; type=bigBed; md5sum=28bcbc4c4602a24eca0207c92e41933f; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5295; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; type=bigBed; md5sum=ba22607c402be8c94de1bd3bbeffc4bf; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3470; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep1V2; type=bam; md5sum=5c4f0385227aa67b3bd11cdd3599687a; size=1013M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3470; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep1V2; type=bai; md5sum=0b368d951e8b982cb505716ab84a3423; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3471; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep2V2; type=bam; md5sum=f032a8216e467cdc8e35c8cb6738f208; size=795M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3471; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Il200SplicesRep2V2; type=bai; md5sum=bc84fe1e35b32569ebda28eb82e0460e; size=2.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3586; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; type=gtf; md5sum=2d99ab7378c17f5d8f65ff1a5c55a186; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3587; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; type=gtf; md5sum=dde5f274b867db5783df341c772abecf; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3586; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; type=gtf; md5sum=84df76bfcd762ae97f529d8f64b24675; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3587; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; type=gtf; md5sum=226a7ad94b3a347089341840bba8b9b0; size=3.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3586; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; type=gtf; md5sum=e9136dad28c1be3ef38891c228aa32e6; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3587; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; type=gtf; md5sum=7091ee78cd8374f021f341cad16838d5; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6261; geoSampleAccession=GSM958734; labExpId=10883; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=a75fdcff8f9ff1d0d82d709536f05301; size=180M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqHuvecR2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000129; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6260; geoSampleAccession=GSM958734; labExpId=10885; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqHuvecR2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=a53719c77fdb0671c24ccb5e2ddbf8d2; size=140M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dAlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-06; subId=3458; labExpId=11008; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dAlignsRep1V2; type=bam; md5sum=46079cae1a4f5978ff9bea2c90738ae7; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dAlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-06; subId=3458; labExpId=11008; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dAlignsRep1V2; type=bai; md5sum=31452197d9adc3544b920da3e6f0ca88; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dAlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3459; labExpId=11007; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dAlignsRep2V2; type=bam; md5sum=04c3bed4e84dfd806d5fe047171a357f; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dAlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3459; labExpId=11007; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dAlignsRep2V2; type=bai; md5sum=99ccace987e8989d5821b671d1103c34; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dFastqRep1.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2010-02-10; dateUnrestricted=2010-10-06; subId=1874; geoSampleAccession=GSM958731; labExpId=11008; type=fastq; md5sum=e09ea52b7b37de7982296df6351f26ed; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dFastqRep2V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - Fixed corrupted quality scores; origAssembly=hg18; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2012-07-30; dateUnrestricted=2010-10-06; subId=7726; geoSampleAccession=GSM958731; labExpId=11007; type=fastq; md5sum=78a0f898277f083d9dec6458c83c7998; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dSplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-06; subId=3458; geoSampleAccession=GSM958731; labExpId=11008; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dSplicesRep1V2; type=bam; md5sum=6c5fe19781edaccc7ab88b95127cf03f; size=336M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dSplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-06; subId=3458; geoSampleAccession=GSM958731; labExpId=11008; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dSplicesRep1V2; type=bai; md5sum=38a4781aa67c1c0969f4ae7247038271; size=2.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dSplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3459; geoSampleAccession=GSM958731; labExpId=11007; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dSplicesRep2V2; type=bam; md5sum=b6fcc38c93ab4cd45dcadad6b24159f4; size=301M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dSplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2010-01-06; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-06; subId=3459; geoSampleAccession=GSM958731; labExpId=11007; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dSplicesRep2V2; type=bai; md5sum=878e66f4ea6dad2e2ec9e0481951684e; size=2.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dTh1014UMinusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=K562; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6358; geoSampleAccession=GSM958731; labExpId=11008; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dTh1014UMinusRawRep1V4; type=bigWig; md5sum=b9e898b101d67c8ac44d2d0960c52b6b; size=35M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dTh1014UMinusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=K562; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6359; geoSampleAccession=GSM958731; labExpId=11007; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dTh1014UMinusRawRep2V4; type=bigWig; md5sum=d9f06a4dc53c43733726bab9693b3be4; size=36M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dTh1014UPlusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=K562; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6358; geoSampleAccession=GSM958731; labExpId=11008; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dTh1014UPlusRawRep1V4; type=bigWig; md5sum=d9183c7ed78ce951c620d1dec39d366e; size=35M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R1x75dTh1014UPlusRawRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=K562; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000126; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6359; geoSampleAccession=GSM958731; labExpId=11007; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R1x75dTh1014UPlusRawRep2V4; type=bigWig; md5sum=429220fd702924f6a842eba80ba331cb; size=35M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3419; labExpId=10517; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep1V2; type=bam; md5sum=305076fb990e5f81e2246e72e9f6fa56; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3419; labExpId=10517; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep1V2; type=bai; md5sum=7afe7f6e7fac1c2a70d09a4f2aa9eea9; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3472; labExpId=10567; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep2V2; type=bam; md5sum=b3dda219a1abd866ed07c5f2e172077e; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3472; labExpId=10567; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200AlignsRep2V2; type=bai; md5sum=5d40a9a6df9001f077f46cd156cebfed; size=5.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3592; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; type=gtf; md5sum=e4c24d036dfb013e3833019f41df6aaf; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3593; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; type=gtf; md5sum=f24c330bdee348a4b22fc39d88848efa; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200FastqRd1Rep1V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5139; geoSampleAccession=GSM958729; labExpId=10517; type=fastq; md5sum=7d504f1aff5522e12540716459ee080a; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200FastqRd1Rep2V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5140; geoSampleAccession=GSM958729; labExpId=10567; type=fastq; md5sum=e3d3c950df44a8d9905ac7f5906c8804; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200FastqRd2Rep1V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5141; geoSampleAccession=GSM958729; labExpId=10517; type=fastq; md5sum=7cef447e04dc9939b53b82d24c27b44d; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200FastqRd2Rep2V2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - corrected some bad quality scores in the previous version; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2010-01-15; dateResubmitted=2011-12-07; dateUnrestricted=2010-10-14; subId=5142; geoSampleAccession=GSM958729; labExpId=10567; type=fastq; md5sum=ae57b122232944a32f7febee5b383ad4; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3592; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; type=gtf; md5sum=716f0e96de4468566be522a2d4c582e1; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3593; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; type=gtf; md5sum=1a2ae71f8d456db33a83ba9ab95e5cac; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3592; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; type=gtf; md5sum=e1853cbbd73f1ecc9a4b6125d91c1c40; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3593; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; type=gtf; md5sum=81e86613a893e36ffa115b8163ead5a1; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5300; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; type=bigBed; md5sum=32f5439476fc6aa72051f07efa51f382; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5301; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; type=bigBed; md5sum=133430d8219a7764da0b30815da1f5fc; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3419; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep1V2; type=bam; md5sum=5e5f8135899518696eaaf59fb781dc83; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3419; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep1V2; type=bai; md5sum=aceb4f12930994af9c9d04efa852c306; size=2.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3472; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep2V2; type=bam; md5sum=bd3e6dbc27eac2ff24fb22e558255bf5; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2009-03-06; dateResubmitted=2011-01-22; dateUnrestricted=2009-12-06; subId=3472; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Il200SplicesRep2V2; type=bai; md5sum=ace475045b8a19cc89c91503a50584f6; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3592; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; type=gtf; md5sum=291b26d4ee75667c6961f6a42cdca27b; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3593; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; type=gtf; md5sum=6cfecef0953867d157745b3d620aa123; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3592; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; type=gtf; md5sum=d6a578f50c057d89204b2587f765479f; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3593; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; type=gtf; md5sum=53288a65791f700b1f187bde8b1d20f7; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3592; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; type=gtf; md5sum=869bad84d8766a22c0c4ed7026ce735d; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3593; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; type=gtf; md5sum=c196b9c1a135528f15ba5b46b47efcb3; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6255; geoSampleAccession=GSM958729; labExpId=10517; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=1ac9727992f3457169c3d159c07e1d4f; size=248M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqK562R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000124; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6254; geoSampleAccession=GSM958729; labExpId=10567; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqK562R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=d515e68f475eb0fa8db58bef58273aca; size=251M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3476; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200AlignsRep1V2; type=bam; md5sum=34b4380f910b706b1c3def98eeedd73b; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3476; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200AlignsRep1V2; type=bai; md5sum=5f34d180db34ce346c562c01fcc03d18; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3594; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; type=gtf; md5sum=513ac45f0d835dacc94411c87586e7e1; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3476; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; type=fastq; md5sum=5e4fba08147d0f0f874891f4753d33c9; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3476; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; type=fastq; md5sum=ff1f9556f455944b96153dfce28e8ca2; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3594; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; type=gtf; md5sum=cbfe39a5cf10f833f606c842a04baafd; size=958K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3594; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; type=gtf; md5sum=2de2d608155f773a272261a6f9319231; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateResubmitted=2011-12-22; dateUnrestricted=2012-01-28; subId=5302; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; type=bigBed; md5sum=33d0e97c21e1cf0fbf084f365dce1f62; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dAlignsRep1.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-05; dateUnrestricted=2012-02-05; subId=3477; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dAlignsRep1; type=bam; md5sum=dff28d0040fc6e7a69c7209db0f31bfa; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dAlignsRep1.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-05; dateUnrestricted=2012-02-05; subId=3477; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dAlignsRep1; type=bai; md5sum=08723fcc237bbc5316b70a49692a833b; size=6.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=3595; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; type=gtf; md5sum=fdefbc1aa9bd954f86fa5cf7421bd29a; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dFastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-05; dateUnrestricted=2012-02-05; subId=3477; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; type=fastq; md5sum=8f4b9bb3d698f0fabb7b3a70b6ae4f52; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dFastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-05; dateUnrestricted=2012-02-05; subId=3477; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; type=fastq; md5sum=145342d9066eb0555371718ef2f7a87a; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dGeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=3595; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; type=gtf; md5sum=892bb8b8c7d74b6574e7a4b3c017a5ac; size=1.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dGeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=3595; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; type=gtf; md5sum=5cbd745d2e1e2cb46fc108c2030bde88; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dJunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateResubmitted=2011-12-22; dateUnrestricted=2012-02-11; subId=5303; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; type=bigBed; md5sum=13f6754d928fcdb1f659a70bbc72bd0a; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dSplicesRep1.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-05; dateUnrestricted=2012-02-05; subId=3477; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dSplicesRep1; type=bam; md5sum=7046f7c502bd88db1c32a7f114fdf858; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dSplicesRep1.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-05; dateUnrestricted=2012-02-05; subId=3477; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dSplicesRep1; type=bai; md5sum=7bd4bac910221437abedfa6a5b767fcd; size=2.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dTSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=3595; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; type=gtf; md5sum=46719f70f2f9133624dc75c189792523; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dTrnscrptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=3595; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; type=gtf; md5sum=1080c969eb84ab230a888d328ac97e74; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200Myc7dTrnscrptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=3595; geoSampleAccession=GSM958751; labExpId=11622; labVersion=myocyte; mapAlgorithm=TH1014; type=gtf; md5sum=83c021b2bfed8532039555db2c70a226; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3476; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200SplicesRep1V2; type=bam; md5sum=56674d15b37e7601ac36e58d0d2f9465; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3476; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Il200SplicesRep1V2; type=bai; md5sum=2b6a01e0f372efe76c42b838046dae9c; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3594; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; type=gtf; md5sum=f82df609b36300fcd0fa6ace96ece038; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3594; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; type=gtf; md5sum=d99631e4fa0e7c197814390ae452fcae; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3594; geoSampleAccession=GSM958750; labExpId=11621; labVersion=myoblast; mapAlgorithm=TH1014; type=gtf; md5sum=decb3b30a4aa3509422bc7cbe6c016a7; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Th1014Il200Diff7dSigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=LHCN-M2; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; treatment=DIFF_7d; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001670; dateSubmitted=2011-05-11; dateResubmitted=2012-03-26; dateUnrestricted=2012-02-11; subId=6252; geoSampleAccession=GSM958751; labExpId=11622; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Th1014Il200Diff7dSigRep1V4; type=bigWig; md5sum=904e04aa6655eb361a0b09fbca0bcfae; size=316M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqLhcnm2R2x75Th1014Il200USigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=LHCN-M2; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001669; dateSubmitted=2011-05-11; dateResubmitted=2012-03-26; dateUnrestricted=2012-02-11; subId=6253; geoSampleAccession=GSM958750; labExpId=11621; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqLhcnm2R2x75Th1014Il200USigRep1V4; type=bigWig; md5sum=835a2d56cddf8b2ac7b729b0191a10e0; size=224M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3414; labExpId=11581; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep1V2; type=bam; md5sum=bf90494743bc9877cc6bc565154485ca; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3414; labExpId=11581; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep1V2; type=bai; md5sum=98fd1fd0664b5bdafcd5dada78ec33d3; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3412; labExpId=11582; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep2V2; type=bam; md5sum=51a067ff282b9061fc39f1a3b98727cd; size=5.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3412; labExpId=11582; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep2V2; type=bai; md5sum=e60c5c8cb7a63612abe04a6b559657fc; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep3V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3478; labExpId=12098; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep3V2; type=bam; md5sum=d30e635c48943bd85ad061bd5eb7294b; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep3V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-12; dateUnrestricted=2011-11-11; subId=3478; labExpId=12098; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200AlignsRep3V2; type=bai; md5sum=f3eba71c2153f484ca6ad2fa17cdbdd3; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3596; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; type=gtf; md5sum=f2d6219c0d86ddf1612a63bd7de51324; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3597; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; type=gtf; md5sum=bc56498d676d9b01a42a1685bde969ca; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200ExonsGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3598; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; type=gtf; md5sum=786ae20b8d997c3f4637f98395c6b9bf; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2010-11-18; dateResubmitted=2010-11-24; dateUnrestricted=2011-08-18; subId=3025; geoSampleAccession=GSM958745; labExpId=11581; type=fastq; md5sum=b144ccab25a4ae10596a9b6d95352eb7; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1904; geoSampleAccession=GSM958745; labExpId=11582; type=fastq; md5sum=1f39b9e3b818f6da44dbd23ec4dace7c; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200FastqRd1Rep3.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3478; geoSampleAccession=GSM958745; labExpId=12098; type=fastq; md5sum=914a451ea395a8929789c48d28f976df; size=4.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2010-11-18; dateResubmitted=2010-11-24; dateUnrestricted=2011-08-18; subId=3025; geoSampleAccession=GSM958745; labExpId=11581; type=fastq; md5sum=bdf0179ed4ecd7c98b4b51da897b0f13; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1904; geoSampleAccession=GSM958745; labExpId=11582; type=fastq; md5sum=acd6496ccd6d1785b60ead52e831c67e; size=4.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200FastqRd2Rep3.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3478; geoSampleAccession=GSM958745; labExpId=12098; type=fastq; md5sum=e189d91d06a615de4e18fa8e591386c3; size=4.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3596; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; type=gtf; md5sum=ebeb0ce2c4f99718e20059f11ca7b791; size=1.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3597; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; type=gtf; md5sum=c86fdfaeb2ef85999cc298a6c0724dbc; size=767K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200GeneDeNovoRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3598; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; type=gtf; md5sum=87f2b40bf221d6fbfe081a40e0c61cc7; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3596; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; type=gtf; md5sum=dbe0c9d911222cc4f8e928c8b0227cf2; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3597; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; type=gtf; md5sum=afcc36725a0769f8d58acfb31ae630f2; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200GeneGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3598; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; type=gtf; md5sum=ad6b6f82c2f47dfb3517aaab79085c47; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5304; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; type=bigBed; md5sum=d33b46f5840cb2d2d6878ffc0662773e; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5305; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; type=bigBed; md5sum=743c6c5f06a65b0a0cddb6b1ec9058ff; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200JunctionsRep3V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-19; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5306; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; type=bigBed; md5sum=589a5a97f52aca270a29d1fb21f122b4; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3414; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep1V2; type=bam; md5sum=de0a84aca83f09e93205822f615cf108; size=878M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3414; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep1V2; type=bai; md5sum=7af9380bedc52b57b29fc33a1c16174d; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3412; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep2V2; type=bam; md5sum=3b111346ba963eb5b3958e1f7161268b; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3412; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep2V2; type=bai; md5sum=ae0ad7c3fc1bdffb01a8663c3baf72ef; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep3V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3478; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep3V2; type=bam; md5sum=e4454727fe54f4872d50e011278a744f; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep3V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3478; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Il200SplicesRep3V2; type=bai; md5sum=c20c3a35b5f1f285af2190fcf189ac92; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3596; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; type=gtf; md5sum=075e9986692317fbc3aa4724de9645f8; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3597; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; type=gtf; md5sum=7b9eef2c333c49b9939012f183a2af97; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TSSRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3598; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; type=gtf; md5sum=eb72137bc641f3bd682335840a0fe53b; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3596; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; type=gtf; md5sum=f755da2fee8d800221587b17410e747d; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3597; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; type=gtf; md5sum=50fb1553a8644f2dbe0861885dcbc618; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TranscriptDeNovoRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3598; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; type=gtf; md5sum=added3851f237dc2abaabb68dfe617b6; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3596; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; type=gtf; md5sum=aac13a83da476a5b1c6858abc0e6fa2e; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3597; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; type=gtf; md5sum=a84de012446172b5e33892a5a9191f83; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Il200TranscriptGencV3cRep3V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-02-19; dateUnrestricted=2011-11-18; subId=3598; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; type=gtf; md5sum=dff4e802de5b80bbeec6ee4f3492c9c7; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6251; geoSampleAccession=GSM958745; labExpId=11581; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=b6ab03e286e27a798dcc9f13d187c1b0; size=226M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6250; geoSampleAccession=GSM958745; labExpId=11582; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=adf89737de8e79527598e10700e9e30a; size=162M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqMcf7R2x75Th1014Il200SigRep3V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=3; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001421; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6249; geoSampleAccession=GSM958745; labExpId=12098; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqMcf7R2x75Th1014Il200SigRep3V4; type=bigWig; md5sum=345732a0c766765f6865f39e42fe4224; size=172M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR1x75dAlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000136; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3460; labExpId=11204; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR1x75dAlignsRep1V2; type=bam; md5sum=d5b78f643ccf7993a885d79c9ac8ff90; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR1x75dAlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000136; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3460; labExpId=11204; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR1x75dAlignsRep1V2; type=bai; md5sum=b9cae79caf35d08a8fa38cb3f1ef9406; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR1x75dFastqRep1.fastq.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000136; dateSubmitted=2010-01-14; dateResubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1483; geoSampleAccession=GSM958741; labExpId=11204; type=fastq; md5sum=32a43ff3839885e0a5903102a0ff5091; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR1x75dSplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000136; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3460; geoSampleAccession=GSM958741; labExpId=11204; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR1x75dSplicesRep1V2; type=bam; md5sum=f1cbc66c36963d1a4db9372eec0c4918; size=204M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR1x75dSplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V2 - A better mapping technique; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000136; dateSubmitted=2010-01-14; dateResubmitted=2011-01-21; dateUnrestricted=2010-10-14; subId=3460; geoSampleAccession=GSM958741; labExpId=11204; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR1x75dSplicesRep1V2; type=bai; md5sum=86f8b7a334ae9c930b4400fffc82f3ff; size=2.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR1x75dTh1014UMinusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000136; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6360; geoSampleAccession=GSM958741; labExpId=11204; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR1x75dTh1014UMinusRawRep1V4; type=bigWig; md5sum=17efd764fabddeba093ed51739445c8b; size=31M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR1x75dTh1014UPlusRawRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=1x75D; insertLength=None; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000136; dateSubmitted=2011-05-11; dateResubmitted=2012-03-27; dateUnrestricted=2012-02-11; subId=6360; geoSampleAccession=GSM958741; labExpId=11204; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR1x75dTh1014UPlusRawRep1V4; type=bigWig; md5sum=8c3317fbb68d7e78d707f9a2f33f50a9; size=32M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3473; labExpId=10884; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep1V2; type=bam; md5sum=82eaf4aa0f4474ff6123a494a4e7bc3c; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3473; labExpId=10884; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep1V2; type=bai; md5sum=2ed8cafe496bf68745fb3fe6b85e9177; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3411; labExpId=11586; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep2V2; type=bam; md5sum=102fb4b6454f275f27c3667541cefdda; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3411; labExpId=11586; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200AlignsRep2V2; type=bai; md5sum=8252bf9e9d7bbdc0ec36bb96bd2eefa4; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3599; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; type=gtf; md5sum=eb7e26f852c345345a397a70a5c4e730; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3600; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; type=gtf; md5sum=09c00147d5dd322206bc0851cc4e636d; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1493; geoSampleAccession=GSM958736; labExpId=10884; type=fastq; md5sum=a9a01674724b6d8eeba00af97fee0603; size=4.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1909; geoSampleAccession=GSM958736; labExpId=11586; type=fastq; md5sum=a18d97f8ba14fc7574c0e84db27e508c; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-01-13; dateResubmitted=2010-01-13; dateUnrestricted=2010-10-12; subId=1493; geoSampleAccession=GSM958736; labExpId=10884; type=fastq; md5sum=dac4b97033fb7e3a4d04349e586049b3; size=4.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1909; geoSampleAccession=GSM958736; labExpId=11586; type=fastq; md5sum=8993a7d4f97d295220dc53d619d4c7d9; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3599; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; type=gtf; md5sum=245f344377962af4830d09251ca00388; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3600; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; type=gtf; md5sum=96bba20ad5210fdec4a4b986fe37de66; size=770K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3599; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; type=gtf; md5sum=ea075d134690d310d20aaea4d40577ab; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3600; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; type=gtf; md5sum=de24189c34a6bfa67b2460f3b9c8219b; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5307; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; type=bigBed; md5sum=802aa5292721eabbea4ca9546809aeab; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5308; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; type=bigBed; md5sum=02403bb5416a0dfe63316e135eb1cb3d; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3473; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep1V2; type=bam; md5sum=d1419ff005feb525b8655b17c4f40e92; size=773M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2010-01-13; dateResubmitted=2011-01-22; dateUnrestricted=2010-10-12; subId=3473; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep1V2; type=bai; md5sum=4145ccde9a59993af21fc29c38b350d5; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3411; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep2V2; type=bam; md5sum=e6ed66ee1e9173fa83317cff531e60d7; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3411; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Il200SplicesRep2V2; type=bai; md5sum=fcb03c981ac9c28ced7f8741d11835cd; size=2.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3599; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; type=gtf; md5sum=7353a2823e928cbbaaeeb9985d480112; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3600; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; type=gtf; md5sum=48365b825f50cf5fbeec908af6257a38; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3599; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; type=gtf; md5sum=db571b5c530200f5dcdf9f7e12e1bfdf; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3600; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; type=gtf; md5sum=a1bcc716fa6957a821a55ce405b840ff; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3599; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; type=gtf; md5sum=174a62dd640c62963ed54a5cd38b9441; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3600; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; type=gtf; md5sum=06350ab353911a2405189c55ca9091b1; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Th1014Il200USigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-05-11; dateResubmitted=2012-03-26; dateUnrestricted=2012-02-11; subId=6248; geoSampleAccession=GSM958736; labExpId=10884; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Th1014Il200USigRep1V4; type=bigWig; md5sum=029a4ba2638395fc44b93f5aa1927153; size=202M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhekR2x75Th1014Il200USigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000131; dateSubmitted=2011-05-11; dateResubmitted=2012-03-26; dateUnrestricted=2012-02-11; subId=6247; geoSampleAccession=GSM958736; labExpId=11586; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhekR2x75Th1014Il200USigRep2V4; type=bigWig; md5sum=057a9d2d67632f22659ff41718fc1777; size=162M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3413; labExpId=11587; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep1V2; type=bam; md5sum=562c779768d207625984bf7fb72d149a; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3413; labExpId=11587; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep1V2; type=bai; md5sum=fbd5d973c6c8606a71948628431a22a5; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3440; labExpId=11588; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep2V2; type=bam; md5sum=698eb744de450f19a5859a4b0b31c20e; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3440; labExpId=11588; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200AlignsRep2V2; type=bai; md5sum=3a4011ed4bce8f730871979e82e1e6f9; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200ExonsGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3573; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; type=gtf; md5sum=0cebca8f15c7d6aed56ad9033e7ab28f; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200ExonsGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=ExonsGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3574; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; type=gtf; md5sum=f3da2830e35162d5ca9a311c40dfbca5; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200FastqRd1Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1906; geoSampleAccession=GSM958746; labExpId=11587; type=fastq; md5sum=9ad7e3ac8569e7c4b88880dca57a9d48; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200FastqRd1Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1905; geoSampleAccession=GSM958746; labExpId=11588; type=fastq; md5sum=849b263f0ab8b5cc9c09820d90bcb35f; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200FastqRd2Rep1.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1906; geoSampleAccession=GSM958746; labExpId=11587; type=fastq; md5sum=c50d9844e78a1a66d9e88acaf33e3948; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200FastqRd2Rep2.fastq.tgz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2010-07-13; dateUnrestricted=2011-04-12; subId=1905; geoSampleAccession=GSM958746; labExpId=11588; type=fastq; md5sum=a5b70601cb79b746d58606f99fd2e9d6; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200GeneDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3573; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; type=gtf; md5sum=3174b2bf67e53030b6b962b5b37252d4; size=756K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200GeneDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3574; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; type=gtf; md5sum=47edf03671d311a7ffab28d84417c02a; size=746K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200GeneGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3573; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; type=gtf; md5sum=935e30c092cdb0f5ed48d76ff530f7d3; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200GeneGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=GeneGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3574; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; type=gtf; md5sum=3c6f8d34d1be105456407328e39751a7; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200JunctionsRep1V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5309; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; type=bigBed; md5sum=8a8dfa5a844d17c8539cf42c10e4a5e2; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200JunctionsRep2V3.bigBed project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateResubmitted=2011-12-22; dateUnrestricted=2011-11-18; subId=5310; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; type=bigBed; md5sum=ffbd43fb174e9481ed382d9f1923843e; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep1V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3413; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep1V2; type=bam; md5sum=0819108916df1d413755b208fe988811; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep1V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3413; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep1V2; type=bai; md5sum=fa2fad06ba5c4ff5e93788adfafd0283; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep2V2.bam project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3440; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep2V2; type=bam; md5sum=65903ccbdb793fb385541a44782d12d0; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep2V2.bam.bai project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Splices; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V2 - A better mapping technique.; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-01-22; dateUnrestricted=2011-10-21; subId=3440; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Il200SplicesRep2V2; type=bai; md5sum=623034a1e60a2b5864eebb44a7a0b3bf; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200TSSRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3573; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; type=gtf; md5sum=287901b7da02a94b705c6d536abd1581; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200TSSRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TssGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3574; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; type=gtf; md5sum=0206d58bc1036fa8a4cb7ac76bed1864; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200TranscriptDeNovoRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3573; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; type=gtf; md5sum=e21f3d9751d46fd577edec296b7e04ec; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200TranscriptDeNovoRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3574; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; type=gtf; md5sum=03038cc8ea8cbde2480d2073f0d34fde; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200TranscriptGencV3cRep1V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3573; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; type=gtf; md5sum=24e4b8522dca509c9dd5f55edc62212c; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Il200TranscriptGencV3cRep2V3.gtf.gz project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=TranscriptGencV3c; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V3 - New Elements Formats; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3574; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; type=gtf; md5sum=d7523997e302832a5dbb19aea0728537; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Th1014Il200SigRep1V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=1; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6246; geoSampleAccession=GSM958746; labExpId=11587; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Th1014Il200SigRep1V4; type=bigWig; md5sum=64697dfe0c39ca6d4af451fdfbb72533; size=158M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCaltechRnaSeq/releaseLatest/wgEncodeCaltechRnaSeqNhlfR2x75Th1014Il200SigRep2V4.bigWig project=wgEncode; grant=Myers; lab=Caltech; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; view=Signal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x75; insertLength=200; replicate=2; submittedDataVersion=V4 - Previous version off by one base; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001422; dateSubmitted=2011-05-11; dateResubmitted=2012-03-23; dateUnrestricted=2012-02-11; subId=6245; geoSampleAccession=GSM958746; labExpId=11588; mapAlgorithm=TH1014; tableName=wgEncodeCaltechRnaSeqNhlfR2x75Th1014Il200SigRep2V4; type=bigWig; md5sum=72612280557b555f369c297c1fde1fc9; size=155M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1; type=bam; md5sum=2aac07f3f113b5bd708915081eb1a11d; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep1; type=bai; md5sum=0da3b2adf4f21d5bb50e7cae31b91f2c; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2; type=bam; md5sum=6cfac7b713ffd1dac8d96220991fae70; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaAlnRep2; type=bai; md5sum=cdfd482d0d8708fff9a3a64f0a488da8; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=66118a478dab7d5340a6e21565624b4d; size=5.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b46f7df44de12eded9e6d2762a6ec130; size=4.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c5aeefb747af4a34afdca8522f9a120c; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=133cddeadce29d2beb24985d8e5bb824; size=4.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=c154c45c5de93dae94786c9f8dc04861; size=169M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=2dfe4c0935cfb01d7e179a264d607e52; size=164M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3124; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=5f0c5ff9633fc0439d4e926d1e457857; size=173M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3125; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=6c39308975dd9a3aeb161a76a61b9534; size=168M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPamContigs; type=bedRnaElements; md5sum=b830589743a3a6cb332fac235ecf9224; size=16M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7017; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1b33cf1ab99acdaf7d6a6e8302b79238; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4589; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c8199d0058cf3eb9f33231d343d87848; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4e7bde376070aa4d486eb62ee372d654; size=3.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7482; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labProtocolId=021WC-,022WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f4c09a5bdfc6d5eae3520e0871fca849; size=5.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4589; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b344ba56b012db6da7524d725ce846d2; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPamJunctions; type=bedRnaElements; md5sum=5182126a7beec4810657e096465684e3; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamProtocolRep1.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=9c31282e64375b22af330b882984454f; size=356K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamProtocolRep2.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=2101ea6b5718a86acb86905e3765f897; size=357K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4258; geoSampleAccession=GSM767854; labExpId=LID9005; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a8f5a36a45995c45f34d92679b3220b1; size=529M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4213; geoSampleAccession=GSM767854; labExpId=LID9006; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5ec24bdf52a1c534bf5630249ff1bf0c; size=419M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3601; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=deb4f180cee8a3e9ff7a6319574a899e; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7482; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labProtocolId=021WC-,022WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e929527ba0c4b55f807a6fd677dbd663; size=6.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=A549; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000184; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4589; geoSampleAccession=GSM767854; labExpId=LID9005,LID9006; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPamTranscriptGencV7; type=gtf; md5sum=8e081541337a72c44a68156ed35d4420; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep1; type=bam; md5sum=6ac70824daafd4d48ca7666a8d7f0f36; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep1; type=bai; md5sum=3976d51809de9a90a2899929905827a0; size=6.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep2; type=bam; md5sum=b6c1b68f7839a19422b55c586bab4e7d; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapAlnRep2; type=bai; md5sum=a3e4d22810234d83d56ad5a1e3954f75; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapContigs; type=bedRnaElements; md5sum=04ed6fd4e425f94df02e1d287c5bcb81; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6991; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b9aaf8118fcbd654cf530a7b4f73bbd5; size=7.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4549; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=03c19397f58f1bf0552ee4c5e14d54e5; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=76e72210d1b9addbd0e093b07122b639; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ce7d690dd6a5e21356474899631b7c77; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7cf599f8b4deb26f9e6a22d0ee64446f; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8083aefd023bb7bb188c90415303921c; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9a1aba565ec3e4f3ff4b0edb85bf1d44; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7441; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labProtocolId=021WC+,022WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9920dd2eed55143bd1b759af41b5ed1f; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4549; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=faba02704bf1a5ada5dc9ca01e722a88; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapJunctions; type=bedRnaElements; md5sum=84eb11cffb3b0c9c90ef3089047b38d3; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep1; type=bigWig; md5sum=16e2e0315b427257095cd941c0b0dd0b; size=659M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapMinusRawSigRep2; type=bigWig; md5sum=b1aa909c2a71ac9ac5a87c9cc555c527; size=717M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2404; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep1; type=bigWig; md5sum=3462180fab45dfd6a1046ecaa622a93f; size=677M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2405; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapPlusRawSigRep2; type=bigWig; md5sum=18000971b8ad4bf2a4867e7e4f887180; size=735M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d88214daf2f649539d70456dccf07399; size=625K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d71d2631aa980f5e56a3307b436f0fe0; size=643K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4191; geoSampleAccession=GSM758564; labExpId=LID8963; bioRep=021WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2046eed83e54b4923fe30b0d0a946301; size=81M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4188; geoSampleAccession=GSM758564; labExpId=LID8964; bioRep=022WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=ace88a9f47c6b88af8272b6ace037cd0; size=77M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3602; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=db1b68ce4663864898a3a54130267ae7; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7441; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labProtocolId=021WC+,022WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5fb115df99508018acded13ca5c886f; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000143; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4549; geoSampleAccession=GSM758564; labExpId=LID8963,LID8964; bioRep=021WC,022WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CellPapTranscriptGencV7; type=gtf; md5sum=23bf162e73146232ce26cf7ce21509c1; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3; type=bam; md5sum=3b490f645453a8aa306c10a542c465a3; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep3; type=bai; md5sum=76d050d7f6689c1cd230b224374d12da; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4; type=bam; md5sum=399fec19341e4bf250e8dde71e579d31; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapAlnRep4; type=bai; md5sum=a03a6c1080da67212fdd876d8274c116; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6040; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapContigs; type=bedRnaElements; md5sum=f676bbb59f70c42876119f38b0568261; size=16M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7016; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=49fb5900044d8ac227cc7e08c01fbd32; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6386; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=12e09a9f94ecd7f1903d99ea82014b55; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3543c3b3c77b42e5b25ecabda7b6170f; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=eadd44d2aff41d33105cf3e1f0ab0eeb; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=ced4510309d7edbcf88b47abcc8f0797; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=db5f31b63166f8cb24f7f9c4a907b996; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7427; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labProtocolId=087C+,088C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=03dfe883a19d279116eb925d5c1a1a6a; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6386; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=b2b38990770602a2867f7e41571606c1; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6068; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapJunctions; type=bedRnaElements; md5sum=f57864f22c749f8899c496f1bcd23f5b; size=20M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep3; type=bigWig; md5sum=98a7e27b17839cee681726edbc89a888; size=127M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapMinusRep4; type=bigWig; md5sum=bed46406712f98093f8f5e6d17d4f52e; size=135M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep3; type=bigWig; md5sum=9fadb2172719af5738f57cb8c8fb8f48; size=131M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapPlusRep4; type=bigWig; md5sum=40a36c88e92cb1ca74c87aab8af11f89; size=139M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6876; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=7e69f0218733811c05a229a3b7810807; size=369K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6894; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=6964f461dd1643d06b70496953ca3572; size=347K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5766; geoSampleAccession=GSM981246; labExpId=LID45897; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=48c7bff607abc2a667c51e9a92f4133e; size=357M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5784; geoSampleAccession=GSM981246; labExpId=LID45898; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=43dcfc1bf61ff80ec74a3b27686a9a0a; size=376M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7427; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labProtocolId=087C+,088C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=92293d37f13b6c4f416146045e645941; size=1.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549CytosolPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002624; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6386; geoSampleAccession=GSM981246; labExpId=LID45897,LID45898; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549CytosolPapTranscriptGencV10; type=gtf; md5sum=7cc5a47ffecb541cc716a014137684f0; size=5.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3; type=bam; md5sum=d3c07fe0bcf0452b7ce0828bb6ef10ac; size=22G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep3; type=bai; md5sum=3fd6f51f8131d112476fab08810c7e7d; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4; type=bam; md5sum=4b531e6b016327cf1961ae83f009b53e; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapAlnRep4; type=bai; md5sum=c1b4226d6b1abf4ef22ad367089211c7; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6036; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapContigs; type=bedRnaElements; md5sum=48d0dca14b4d57d6b7496ed55518b24f; size=28M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=c561fce7d7b32225c99747d95810383a; dateUnrestricted=2013-03-02; size=20M; dccAccession=wgEncodeEH002625; replicate=3,4; view=ExonsDeNovo; labExpId=LID45899,LID45900; subId=7005; cell=A549; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981247; bioRep=087N,088N; lab=CSHL; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6381; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=a236696ec866f93b4f9a97398c8d4cc5; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=eb233fb39bdb51bdf7572290ec344bee; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b80881b49f1dfc049aeddcbdcbe8d434; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=15ecebbad95d140c29eaaa83f4985a26; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=8f45fb4617c5b66171cd19caa2df42af; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=087N+,088N+; md5sum=d305b800cb402d786763c445a00d0c62; dateUnrestricted=2013-04-16; size=3.5M; dccAccession=wgEncodeEH002625; replicate=3,4; view=GeneDeNovo; labExpId=LID45899,LID45900; subId=7420; cell=A549; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981247; bioRep=087N,088N; lab=CSHL; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6381; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=77f519fc5632ec4736666c977278410f; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6059; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapJunctions; type=bedRnaElements; md5sum=cd641d2f0019ed1972b6eba6bf37ba27; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep3; type=bigWig; md5sum=23f311ee241bc3c7cd6b3770672ae946; size=232M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapMinusRep4; type=bigWig; md5sum=5bb61d77cdff71f7de2e2fabf6fd4b0e; size=193M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep3; type=bigWig; md5sum=7dcd6fd38939dca5b5cdf26bc4734333; size=240M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapPlusRep4; type=bigWig; md5sum=206d8010e2d43178b4703c67234e5f89; size=199M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6900; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=1e96894421e634223df6f1ab9b2ce0fa; size=425K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6872; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=b21d1bbbfdcfc1d0a5b535f9a10901a1; size=409K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5788; geoSampleAccession=GSM981247; labExpId=LID45899; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=13a3cf78259cccfa84111948a3625e0f; size=395M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5763; geoSampleAccession=GSM981247; labExpId=LID45900; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=bb34dd305b8c9ff58f9f71afa20c9318; size=363M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=087N+,088N+; md5sum=0d34c03ead29234081628230ee7d2c1b; dateUnrestricted=2013-04-16; size=4.1M; dccAccession=wgEncodeEH002625; replicate=3,4; view=TranscriptDeNovo; labExpId=LID45899,LID45900; subId=7420; cell=A549; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981247; bioRep=087N,088N; lab=CSHL; type=gtf; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqA549NucleusPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002625; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6381; geoSampleAccession=GSM981247; labExpId=LID45899,LID45900; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqA549NucleusPapTranscriptGencV10; type=gtf; md5sum=46dc05c9ebece588b891033b4440906d; size=5.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1; type=bam; md5sum=bf874b47b46a49e9408b66dd0f8784d5; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep1; type=bai; md5sum=0694486e4a024908c72e8fc2c173b328; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2; type=bam; md5sum=b2d49064bf6100d51ba8383ef40de2e2; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaAlnRep2; type=bai; md5sum=b3f52dd205053226aa8de5804274f81c; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=02b8369e5831a95e4a308cab11e8b7b2; size=5.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cd87b6035f0f3e0957556c998f20995e; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b5ec89ce6f04fb74fbcf5a76b6b76b6e; size=5.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=59774fe2d55049012367aa734ffade4c; size=5.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=f8c0e13d372dfdcd794ace4e67de0995; size=778M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=9616613f0f2e7d06199d8be50c40e62a; size=151M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2707; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=c4f0a60a2ee011be7aa2c0d2df2fd21b; size=805M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3127; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=4794e5b1f475d044fb924cb6df9523c7; size=154M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPamContigs; type=bedRnaElements; md5sum=52dd695dafe22c5d71ae151577a229c6; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6946; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ef20a24e3ddd77f66a32ee0be595da22; size=9.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4558; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d7cea3e64ccea65613a07ee807a5cd1a; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=05ce37190de4ade2bb718a809848070d; size=2.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7452; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labProtocolId=017WC-,018WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6d235490ffb5e82a80a6332356b9411e; size=4.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4558; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b6ce9d2b72167bf78d675094362ca2a9; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPamJunctions; type=bedRnaElements; md5sum=0e905d97381fd9400f2ee5dbe487be4a; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4208; geoSampleAccession=GSM765396; labExpId=LID9001; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2d45677fe2f2783339443986552414a3; size=446M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4205; geoSampleAccession=GSM765396; labExpId=LID9002; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d687a3c37a718e4f684f6d52f32feebb; size=614M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3603; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fa96a5383f0e3abaffd952f98cca9c7a; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7452; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labProtocolId=017WC-,018WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0c9adf8c564f18667427c1f8be31d855; size=4.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=AG04450; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000179; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4558; geoSampleAccession=GSM765396; labExpId=LID9001,LID9002; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPamTranscriptGencV7; type=gtf; md5sum=fab19638c2c43fd5995f23fbfce8e076; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1; type=bam; md5sum=b04b44097cc0d85871b2b85d16c0e726; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep1; type=bai; md5sum=6e7e60e44a5ba6b749018df2048ceeea; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2; type=bam; md5sum=0769d29627ad2d59745d7a3f7934097b; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapAlnRep2; type=bai; md5sum=856fd7103cfc96569749d6ed0a9e6d84; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapContigs; type=bedRnaElements; md5sum=07e87488e7af8e706e8f19fe3eb8d2d4; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6942; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=81e91f0512b63ee1d5753d8e63780547; size=6.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4554; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4536d749f7d1629171d84f4fb64b5392; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=29994ee3818ce71139b382afb3ef3874; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b4ad4b1f1690753d16d63518db9f6215; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f29631a0dc083bc334a12bad5b629a86; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1ff857ec58e22faa0265cdbbe5820dfe; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=947f5241f2d6d86dd00aa975be5f1035; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7447; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labProtocolId=017WC+,018WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0556511edae949eb2bbe365ebbade29f; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4554; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2041388e7e32be3ba5225d5ca1fb6c98; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapJunctions; type=bedRnaElements; md5sum=f9feeb044851231d8e78f611bab12843; size=8.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep1; type=bigWig; md5sum=fda0397331ce7ca6ffb9cd2a3d5b7d47; size=573M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapMinusRawSigRep2; type=bigWig; md5sum=330b15afad4afaab080e0b5bbd73452d; size=535M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2345; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep1; type=bigWig; md5sum=63b34dfd670b697a0c2f3d0bfbf9dc05; size=588M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2406; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapPlusRawSigRep2; type=bigWig; md5sum=1c24ab1724a4df1e8329993651c0f237; size=550M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1b294c280d800871b7023a5c08d9d185; size=621K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d1b5afdf6114e9c7d3b25250655df5b8; size=629K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4253; geoSampleAccession=GSM758561; labExpId=LID8965; bioRep=017WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=f470eadf7aafecaf76e7df9e90ff20bd; size=111M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4250; geoSampleAccession=GSM758561; labExpId=LID8966; bioRep=018WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4bfa572632aef9ded256430b0d168e1e; size=157M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3604; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=42806836f6d2acc15ed0bf3c8a10a4b9; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7447; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labProtocolId=017WC+,018WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d822bf24729fc5034e6b6f7150b315d7; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000144; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4554; geoSampleAccession=GSM758561; labExpId=LID8965,LID8966; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqAg04450CellPapTranscriptGencV7; type=gtf; md5sum=aacf107c3de4dee8a9bf9681668b0e9b; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1; type=bam; md5sum=5ff8fd7689442e2d3e0e84bfd8ebcbb2; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep1; type=bai; md5sum=5f18542615c5d66311e1d948bdceeff7; size=6.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2; type=bam; md5sum=3d2246eca90ce5f6cf2ba05aa4138260; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaAlnRep2; type=bai; md5sum=7b2803d446d031b25c3d6580ec0a13e4; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4f102e79029de2346c8413cab7b2aea4; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=85febd523eeeefbca022f94399bfcf4a; size=4.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=64e9fd52b9881acbbfa5bad5ef2f4dfe; size=5.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cb66f92ee33cfde0c6324eecf666c6d9; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=ed370ae62ed221ca867ede2a49d889a3; size=135M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=fc1a1d7c0c1bc218dcce280cfa97aba3; size=134M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3128; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=f00c37ab459ca81c53191b799b5b3e1e; size=141M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3129; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=4e6f9165bb3a6059b621c6cd6c16ed2c; size=140M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPamContigs; type=bedRnaElements; md5sum=3fc283e272af02cd4eff99121b7a45df; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6965; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0c6661593a66cff9e41f0893a13278c2; size=9.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4581; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=abd01477933de79eedd5abaf5402be6e; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2f246848e185a8ceda8917b9124f1bd1; size=2.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7472; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labProtocolId=037WC-,038WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=2657ad4d638513eb3fcff050f19d8a55; size=4.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4581; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d198f7c3bfb52bd604511552d3e9e9af; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPamJunctions; type=bedRnaElements; md5sum=e3586c7489d814b12e530fd6350409d4; size=4.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamProtocolRep1.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=58963fc04189bf2f1302a7a90dce4bc6; size=352K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamProtocolRep2.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e38af8abcf549bdbed47da5d813b14e7; size=359K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4190; geoSampleAccession=GSM767855; labExpId=LID9007; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=262e142bd4fdb035bca97222f731be92; size=595M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4254; geoSampleAccession=GSM767855; labExpId=LID9008; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c5c63068bc436685441852dab8fafa07; size=590M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3605; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d05dfe1ea442991e722cdab968f20072; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7472; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labProtocolId=037WC-,038WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5b21098169fa0d8bd4848a5b040f5bc; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=BJ; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000185; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4581; geoSampleAccession=GSM767855; labExpId=LID9007,LID9008; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPamTranscriptGencV7; type=gtf; md5sum=a023af5f3520935f655b54cffcd6a8c6; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep1; type=bam; md5sum=aca7563b75059b34dbde330163a7f93c; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep1; type=bai; md5sum=aae48a5d20ca761d91cbd75e913c7e60; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep2; type=bam; md5sum=0465277e9bc56886f737aa4141bfcf01; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapAlnRep2; type=bai; md5sum=bb7414e2a4e820b2d88ed7bf9edc484b; size=6.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapContigs; type=bedRnaElements; md5sum=c65a5db1991f1a934fab425f74dd907e; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7004; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8a8f111288e5810857211b403b3a31aa; size=6.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4576; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=81bf9268f0925331de0e73620970ceb0; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f9cf6c332c26b90909a74be2d878eabb; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a246dc38a67aa16504518bd7cc3ca502; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc506fb9a06b7807adf2e05fccbf2586; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3d83787e240d7295206e264f42526363; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=feb50dfc8c2c0c444c20afc5638c215c; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7469; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labProtocolId=037WC+,038WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=faf5517e8e148e8121fafe19998fc444; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4576; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9f5fa21db8af5c3faed1851322570a26; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapJunctions; type=bedRnaElements; md5sum=0c0fb8f1d8212d785a0efe30db698979; size=8.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep1; type=bigWig; md5sum=0415dbe7e4baefa0941b49c578b4431f; size=499M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapMinusRawSigRep2; type=bigWig; md5sum=6656e0683ee649fa35aa7f091115b572; size=408M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2456; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep1; type=bigWig; md5sum=7b2302db1d7d19d35635451146694f5c; size=519M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2010-10-01; dateUnrestricted=2011-07-01; subId=2477; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapPlusRawSigRep2; type=bigWig; md5sum=456c3e8da305b3319d6bec9432bbcef1; size=425M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=112ab88c13437f1455967a87e04d1c0b; size=608K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bc4a45f826f37be785e954468543a5af; size=605K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4251; geoSampleAccession=GSM758562; labExpId=LID8969; bioRep=037WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=65232b0445896ad549aeff3c22aac6d9; size=176M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4212; geoSampleAccession=GSM758562; labExpId=LID8970; bioRep=038WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3ac499be0dc2dd45e2345d3c454fce9d; size=163M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3606; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=be9c7f7c8aa4293a94bc062a0860b350; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7469; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labProtocolId=037WC+,038WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=23597284c8d0ce000580d9171a60faea; size=1.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqBjCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000145; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4576; geoSampleAccession=GSM758562; labExpId=LID8969,LID8970; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqBjCellPapTranscriptGencV7; type=gtf; md5sum=1e5405d9b0fb8d28683f91d6067e387d; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1; type=bam; md5sum=57ceab9c0d4fa8a880bbc3156e5cd095; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep1; type=bai; md5sum=bd09f50aff97d2c8a6c301d05768dbe2; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2; type=bam; md5sum=b8e87e39f989a313fd97739dc00863df; size=4.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamAlnRep2; type=bai; md5sum=5961d2b1bfa853265052d7469100ece5; size=6.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6026; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamContigs; type=bedRnaElements; md5sum=bc99e5aa82cdcffd5afe5451beeedc70; size=16M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamExonsDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=4a42b4c7c0e1d934579829b837093d00; dateUnrestricted=2013-03-02; size=12M; dccAccession=wgEncodeEH002666; replicate=1,2; view=ExonsDeNovo; labExpId=LID44659,LID44660; subId=7015; cell=CD20+; rnaExtract=longNonPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981254; donorId=RO01794,RO01778; bioRep=041WC,042WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6372; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=184b29dc098e48f07b8415b64b45bf23; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamFastqRd1Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4d35ecfebc483186c4dc56916332eecd; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamFastqRd1Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=90dbd6272a2bbcd4ebe3733a2dac10e9; size=4.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamFastqRd2Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4b8896b4a027c8285ceeed41695bf39f; size=5.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamFastqRd2Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f0b9a3a29aa3960d5d4ea83fff11f081; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamGeneDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=041WC-,042WC-; md5sum=3552416c90d24076f7a351af28c0559c; dateUnrestricted=2013-04-16; size=5.0M; dccAccession=wgEncodeEH002666; replicate=1,2; view=GeneDeNovo; labExpId=LID44659,LID44660; subId=7426; cell=CD20+; rnaExtract=longNonPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981254; donorId=RO01794,RO01778; bioRep=041WC,042WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6372; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e47735f977bbf4ee163df95e3a16cde2; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6064; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamJunctions; type=bedRnaElements; md5sum=c72663e6f8bd534b999746c628400730; size=7.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamMinusRep1; type=bigWig; md5sum=61176fc04382b397dfc4c2f298c9cbf7; size=220M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamMinusRep2; type=bigWig; md5sum=56caa1915f2a4202dd2571f5dc252549; size=86M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamPlusRep1; type=bigWig; md5sum=343d6f74fd36a167b569b33d09aac86e; size=227M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamPlusRep2; type=bigWig; md5sum=ae748c912504066218cc2a2f536636a8; size=88M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamProtocolRep1.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=41e157dbc38488404d837a916e54298a; size=608K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamProtocolRep2.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=777c0b55c3b5fe894bfe955189482ae4; size=603K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5793; geoSampleAccession=GSM981254; labExpId=LID44659; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=bde8aec65c078e7e291fc487b7fa1d6a; size=255M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5761; geoSampleAccession=GSM981254; labExpId=LID44660; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=15b3a73ca4c7818e382b58a9608b6afa; size=463M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamTranscriptDeNovo.gtf.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=041WC-,042WC-; md5sum=392d6e495ab0afbf24450c9bfc52ba8a; dateUnrestricted=2013-04-16; size=5.6M; dccAccession=wgEncodeEH002666; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44659,LID44660; subId=7426; cell=CD20+; rnaExtract=longNonPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981254; donorId=RO01794,RO01778; bioRep=041WC,042WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPamTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=CD20+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002666; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6372; geoSampleAccession=GSM981254; labExpId=LID44659,LID44660; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPamTranscriptGencV10; type=gtf; md5sum=b07c5ae4a050062c3792c030b9b76e61; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1; type=bam; md5sum=3b681611f7632734969a6775211432c7; size=7.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep1; type=bai; md5sum=30a7d4d686184adcefdc2397e9c1fb27; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2; type=bam; md5sum=72967f4fbe72f23f6071f3cbe66773d4; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapAlnRep2; type=bai; md5sum=e81bb5c21d6d25de0a046611e09677b2; size=6.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6039; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapContigs; type=bedRnaElements; md5sum=2838b458d18c04699d8ec1bcaeea5a11; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapExonsDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=3e55a399204e6662cb3c4905b60d0048; dateUnrestricted=2013-03-02; size=14M; dccAccession=wgEncodeEH002665; replicate=1,2; view=ExonsDeNovo; labExpId=LID44498,LID44499; subId=7014; cell=CD20+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981256; donorId=RO01794,RO01778; bioRep=041WC,042WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6385; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7f026f8674978854d2fb3ee0769739c8; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapFastqRd1Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f451a6b7054d0c260b17fe79166aeb0b; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapFastqRd1Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2f25f2d0ebeacbaa0a9f77c7317bf28a; size=5.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapFastqRd2Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=125a85aa10637006ccdc5ff5fd74abc0; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapFastqRd2Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a2a9952c9b3b439ee233c23a188922be; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapGeneDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=041WC+,042WC+; md5sum=a5f107d466a4ab73809acd77ce34d238; dateUnrestricted=2013-04-16; size=2.0M; dccAccession=wgEncodeEH002665; replicate=1,2; view=GeneDeNovo; labExpId=LID44498,LID44499; subId=7424; cell=CD20+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981256; donorId=RO01794,RO01778; bioRep=041WC,042WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6385; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7a33ca2fdb0a4a71d7a9974fad8e7e6f; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6067; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapJunctions; type=bedRnaElements; md5sum=802e4e7a6be6311d7f82984b4ab3d4b3; size=8.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapMinusRep1; type=bigWig; md5sum=bfaae9c78dda581888d330286bd3d2d4; size=168M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapMinusRep2; type=bigWig; md5sum=57c64337169fd14acdfe1770867255ae; size=153M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapPlusRep1; type=bigWig; md5sum=69b0ad10ac592a52edfb149eb88d1a57; size=172M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapPlusRep2; type=bigWig; md5sum=c49c2b194cfc2335ddd7436ee2b0a53d; size=157M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7673; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; labProtocolId=041WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4a98e26df739df4cb5b67f0bfdc7a043; size=375K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7680; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; labProtocolId=042WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=950f482fd842ebf8aee6814fa7806796; size=369K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5758; geoSampleAccession=GSM981256; labExpId=LID44498; bioRep=041WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9a80f0df2462e175aa92835de7a8a4bd; size=514M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5772; geoSampleAccession=GSM981256; labExpId=LID44499; bioRep=042WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e849a639c747a4bf7ef25251147923cb; size=762M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=041WC+,042WC+; md5sum=d7736bdbd31e84fa7d731365b45c0d88; dateUnrestricted=2013-04-16; size=2.6M; dccAccession=wgEncodeEH002665; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44498,LID44499; subId=7424; cell=CD20+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981256; donorId=RO01794,RO01778; bioRep=041WC,042WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd20CellPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002665; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6385; geoSampleAccession=GSM981256; labExpId=LID44498,LID44499; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd20CellPapTranscriptGencV10; type=gtf; md5sum=46e1c2678ebe0917bf1372ce710fda64; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1; type=bam; md5sum=d0ad5bf8958bba82824002e7ca9332a9; size=30G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalAlnRep1; type=bai; md5sum=81250bab1665815dc761cfd6026435b9; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6035; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalContigs; type=bedRnaElements; md5sum=4cdfcc9c4aca2c872543f8e46a03166e; size=51M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7003; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=126155f3083472037d83338221abab63; size=12M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6380; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=35b5ecc88632e75a4ea32c8a79e5452d; size=18M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=83d23ef0654561906afcdbef965d3509; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=e35870a1b894695dcb81f0a65ffcfba4; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7419; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labProtocolId=043WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=d50b0b1690bd1b5200d0286d808eed33; size=4.5M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6380; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=0d22915f4d51d5c27ebb75051ef9e21b; size=1.7M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6399; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalJunctions; type=bedRnaElements; md5sum=8158d1f2a930284e0ae0945632830871; size=16M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalMinusRep1; type=bigWig; md5sum=55d6c7400492af62dc93f5ededae66c4; size=443M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalPlusRep1; type=bigWig; md5sum=50e12cf07491d82d01448573a8932505; size=460M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7665; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labProtocolId=043WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=94376ad0e56ecd1d87854696491e6297; size=395K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5780; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=8cde1c09f200a46b75bfe548e6411c45; size=424M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7419; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labProtocolId=043WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=bb8161e4293c663233dc38575547d1ec; size=5.3M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=CD34+_Mobilized; localization=cell; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002670; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6380; geoSampleAccession=GSM981257; labExpId=LID45901; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqCd34mobilizedCellTotalTranscriptGencV10; type=gtf; md5sum=583b87178ef42ec0692e2274c4cd4ce2; size=4.4M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1; type=bam; md5sum=1a3f73a84e8cc76726202565cb9553ca; size=9.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep1; type=bai; md5sum=8b4c4066203931a016c4a6275b247c2b; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2; type=bam; md5sum=7fe8124e8906f9593a59c6e1e6b21250; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaAlnRep2; type=bai; md5sum=bd41a0476f825f0f88daf6edc41f479d; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6b980110a21e3ce32480c5c7c40db2e9; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=dc08ae29be2a96560582287fa734a700; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=95be7a93faa887fa6ed9fd82cce4a32e; size=7.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c9f89f5b82e9a5ad027bdecf504e0a4d; size=7.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=f65d5b1cf55535bb52ae792efe178e0e; size=269M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=adccefe27695169d299834f7feee9b42; size=971M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3230; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=2d592b8d0a4083217c8784f7af13e1b7; size=282M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2402; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=6d5d8e28815734d88750ee01e85621ab; size=1021M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPamContigs; type=bedRnaElements; md5sum=d68f85952a46021668eb3c251d349d37; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7010; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f4f2eae882b34a6fdc863e69dde02972; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4586; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=cd61a5cc3d1f2e32cce34079a7c9acf5; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2dd0abfb8810f6287cfd870384f1ab1b; size=5.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7479; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labProtocolId=003WC-,004WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0bc37a9a54259401f63a046a85f661cc; size=6.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4586; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=93c74d80c92d314f2f118c3491995c54; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPamJunctions; type=bedRnaElements; md5sum=19b888cd49c1bdb091ec688192c0d74a; size=6.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=ca4d48b3b790843a1c05fca00b9500d6; size=439K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=468307162b5a7c51402d8521aa2f7811; size=438K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4298; geoSampleAccession=GSM758572; labExpId=LID8661; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=483f64bbaf7d5acf9bf78c56c480c22d; size=231M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4288; geoSampleAccession=GSM758572; labExpId=LID8662; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4a49b79031595eef9b12b6b91e7d69be; size=142M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3611; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d6b9e9c1aa150a3aaf7a10e7c3b3ac7c; size=27M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7479; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labProtocolId=003WC-,004WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4abf445878c8290b90a2ab18192675c1; size=7.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000148; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4586; geoSampleAccession=GSM758572; labExpId=LID8661,LID8662; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPamTranscriptGencV7; type=gtf; md5sum=8455a925659e0f248a9b76fac0ef6403; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1; type=bam; md5sum=ef50cfac8b54beae2e40b510516dbfbe; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep1; type=bai; md5sum=daa9acb76bbb00b29f5a406fb8bd80c6; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2; type=bam; md5sum=d5c629b8f777487a31f8b47d0851675e; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapAlnRep2; type=bai; md5sum=4899891103e3066dee2bb3f182cd7dd3; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapContigs; type=bedRnaElements; md5sum=e3fd7afcc99cc3081cd3d54df22221ca; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6959; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=369fd86d3522a77625f1397380935dea; size=7.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4571; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1bec86074ff5743e65682ac1787e323d; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=84f543d1cf92a7f36dfe4deed4d44b47; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2749ae678910489f1a7560c35b4ef79b; size=9.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7ad2db3a9854a2e10ceabc3b09db7f65; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b74c4256a8f3b9cde34e5101c16954e5; size=9.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a5b94a0922c374dabff468c903ded60b; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7465; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labProtocolId=003WC+,004WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=13817442a2335487682e07da2dfdf33d; size=2.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4571; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9d3e2c261ec319ed7a1de34e397b865b; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapJunctions; type=bedRnaElements; md5sum=9f7e7cfa7e3ce4da05ddcde84f572d43; size=9.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep1; type=bigWig; md5sum=4b2ec164f0172da8d2c2e31d1db78834; size=807M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapMinusRawSigRep2; type=bigWig; md5sum=8ae303919ed45aac5bd48587ad8d92d2; size=826M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2097; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep1; type=bigWig; md5sum=2edf2618c543cbc0e7fcf4cfac7404be; size=844M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2445; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapPlusRawSigRep2; type=bigWig; md5sum=cdd45d6f623ee8e0c5df429c8b24b601; size=861M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=43418598be7729e08a4a3201d1d6baa6; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1b9fbf29f0acfe3a6011b352b00acce3; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4260; geoSampleAccession=GSM758559; labExpId=LID16629; bioRep=003WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d8c66cf0c13efadaf1451a5c95df6cdd; size=596M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4201; geoSampleAccession=GSM758559; labExpId=LID16630; bioRep=004WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3e65f7905f148e7a30eeabe8602caa2d; size=380M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3612; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=96c6e06a3290c25ca4dcb878fb18bc99; size=16M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7465; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labProtocolId=003WC+,004WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9069eb6cdc02a41a610e0152b8458498; size=2.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000146; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4571; geoSampleAccession=GSM758559; labExpId=LID16629,LID16630; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CellPapTranscriptGencV7; type=gtf; md5sum=9493af1fc32e35bc312acbcdf0f21570; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1; type=bam; md5sum=dcd233c01bc856e5cc496b7d49771d67; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep1; type=bai; md5sum=364ba68eb832dec9378ab620aa386c9d; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2; type=bam; md5sum=2e931b7df0bb6175b28bb20d6979fe36; size=4.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalAlnRep2; type=bai; md5sum=03e95a1c6d93214801996337494afb49; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalFastqRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840138; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=462b83b5e97c42e67687c9eeb3f90fae; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalFastqRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840138; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=5afae9e6c83681896b94f62665754df1; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep1; type=bigWig; md5sum=cadc625e69182fb0af58e4e6a48b2687; size=267M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalMinusRawSigRep2; type=bigWig; md5sum=6cacaa26ba8546a42ded06e443bca381; size=203M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-7; bioRep=gen0102WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep1; type=bigWig; md5sum=9ca68b5ab1aab4a0768f949edc2c34d2; size=278M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000141; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1502; geoSampleAccession=GSM840138; labExpId=crg-12; bioRep=gen0103WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqGm12878CellTotalPlusRawSigRep2; type=bigWig; md5sum=bb977f7faab0e17a5288a2a63d0aac18; size=212M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1; type=bam; md5sum=5ce26b26feaf8cae59cf91f9cfa91aef; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep1; type=bai; md5sum=83e62af7f48eb3b3e35cf764bc19c560; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2; type=bam; md5sum=5c328902e347e5bc91832d467e581821; size=9.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaAlnRep2; type=bai; md5sum=adfda10dee177b0b7fc4421cf2aa71c0; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cae7d64006174ab9cfc0dac43d0002c6; size=5.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=11c2ca98e4a0c4df7b981fa628eaa2aa; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cbbba9c38b8977d90a74c6a11c0806c1; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5a071d9103cd7efad6de52c41370a91b; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=5e085ddb9bec9e0cdb7dd365ad1e38f9; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=5320df60c493b62323159ba8902045ac; size=29M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3130; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=f32c7e5690e6312bd283e778318345ce; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3131; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a4493f8c3c86fa48cd6cbdaaf5978ed9; size=30M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPamContigs; type=bedRnaElements; md5sum=588a4beea267d3776ee2f11b68ccbeff; size=5.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6948; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=294be67b1ab4c474bdc4b285381ef76f; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4559; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f84d867b62786f9dd064ca1ec1d65f2b; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=dae43d5579499bd35d3ab744d8a93adf; size=604K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7453; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labProtocolId=003C-,004C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b23ffe4424db730a7206a9aeaef09dca; size=818K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4559; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fa7a8232cbbbda478e5b3a51de10e654; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPamJunctions; type=bedRnaElements; md5sum=6eabd58ef6b416a8097364ad48832a4c; size=2.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=53cb051ca1faed18b64f982116293ef4; size=493K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=11b00c97573b3943293fb3798b485fcc; size=498K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4195; geoSampleAccession=GSM767852; labExpId=LID18547; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=215e86d2ce31d9ebd93433601339c98f; size=230M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4292; geoSampleAccession=GSM767852; labExpId=LID18548; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c2f2f8e53d2fd13356d9d23f26d6a198; size=259M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3607; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=95a064128b9a9acc673f698cc434d66b; size=4.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7453; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labProtocolId=003C-,004C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1f476a3081e75b9dce7b68a39358b3bf; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000186; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4559; geoSampleAccession=GSM767852; labExpId=LID18547,LID18548; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPamTranscriptGencV7; type=gtf; md5sum=b89111f73510e97ec39294162bc8a91c; size=4.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1; type=bam; md5sum=d6af952f8274ec254961f0396ac8c60d; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep1; type=bai; md5sum=9e350d10b4bbb2ade1f9810f984b2142; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2; type=bam; md5sum=6b002f30c7301a45f850db4c171dc5c2; size=9.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapAlnRep2; type=bai; md5sum=84a09bd85bbf8f76ac7e2dcca608d3ea; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapContigs; type=bedRnaElements; md5sum=f047bd8aba73772997ce3c67a1c617a5; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6944; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=e1e27a5447754251049d811838cbfb8f; size=6.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4553; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7b7ad3f06e434958e7e63612d0c52f30; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a1ae3657fe595fdf38f6b55381f8cad7; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b6b464edc8e5d6ce457547236801ff90; size=5.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fa54c1dc9d0803e6c2b4888fd2a94453; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a87571f6b678ab016e2182247e1fa7c3; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=08bd6127085b77f8c91f36515ed024cd; size=1.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7448; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labProtocolId=003C+,004C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=aea173027ba9549476f0d68d7b699050; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4553; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a1f08997dd55699ccd91a216a9a8602d; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapJunctions; type=bedRnaElements; md5sum=7b90596871bd34ba878c4cb15aeb9e09; size=9.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep1; type=bigWig; md5sum=49d31ed4be23c30264fdbbdcbc25f884; size=445M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapMinusRawSigRep2; type=bigWig; md5sum=1f90f73e1e748608ed25d4cba71800b2; size=425M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1911; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep1; type=bigWig; md5sum=d1a4b6a52a61d2b38cecf77e30259fe9; size=457M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2441; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapPlusRawSigRep2; type=bigWig; md5sum=f100b30fde8819a023878d27bd4d7691; size=437M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b14b590331262214899151fc8bcaf37d; size=954K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bd7b69dff52cf717f77f8bf41c4a9094; size=960K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4276; geoSampleAccession=GSM758560; labExpId=LID8467; bioRep=003C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=bd305b2338a257d984d2a606ef821025; size=78M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4231; geoSampleAccession=GSM758560; labExpId=LID8468; bioRep=004C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5c0aa569da3d31c0b46c31cce8683382; size=43M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3608; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e9f2c427cd77637479dea7863ad57be5; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7448; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labProtocolId=003C+,004C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ae6075ea0f0741467c1b698504d77962; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000147; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4553; geoSampleAccession=GSM758560; labExpId=LID8467,LID8468; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878CytosolPapTranscriptGencV7; type=gtf; md5sum=5ab9dadaad4224e4e450cbc41c42bc87; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3; type=bam; md5sum=7f65b29761b2ff70b68e2dc64f5ab397; size=32G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep3; type=bai; md5sum=88650ace2130a350869eb6e266f8821c; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4; type=bam; md5sum=bf93db27957f49c9f3b56526b82b7cf4; size=28G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalAlnRep4; type=bai; md5sum=b526d5e31be34e68ebf2a5071aab3dfc; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-28; subId=7194; geoSampleAccession=GSM984605; labExpId=LID47963,LID47964; bioRep=091NL,092NL; labProtocolId=091NLt,092NLt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalContigs; type=bedRnaElements; md5sum=c60dcc7cac52aef8f8482e04216a6ef9; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4449a8131c25557a8b635f6d3d267011; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=a450a51faa2dc8e6fb566554bd5be639; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d7b811e42386fc8b39117335f073ad11; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=b207c0c3809671f4287b4a80fec732ac; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-28; subId=7196; geoSampleAccession=GSM984605; labExpId=LID47963,LID47964; bioRep=091NL,092NL; labProtocolId=091NLt,092NLt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalJunctions; type=bedRnaElements; md5sum=c36f7037494b13ab5254e0b2a7fa951d; size=23M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep3; type=bigWig; md5sum=fa06154a5e203a38d380178c2ffbeb21; size=690M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalMinusSignalRep4; type=bigWig; md5sum=4b19532f6d465d5414284137911459f6; size=631M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep3; type=bigWig; md5sum=09a8c27daf1397450aed01e243205c9e; size=722M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqGm12878NucleolusTotalPlusSignalRep4; type=bigWig; md5sum=a1bb7e17049640d96a2cbbfac24a5801; size=659M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; subId=7816; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=02bcebe8a0ce9b2a4e778510f09b0d56; size=293K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; subId=7815; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=eba3d27817a2efec3c26ad474c29ba1d; size=288K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7192; geoSampleAccession=GSM984605; labExpId=LID47963; bioRep=091NL; labProtocolId=091NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=4b0ae5c6267637a75467dd2b41679519; size=176M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleolusTotalSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleolus; rnaExtract=total; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003034; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7188; geoSampleAccession=GSM984605; labExpId=LID47964; bioRep=092NL; labProtocolId=092NLt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=b796224c569c1da56f329bbedb1c143b; size=115M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1; type=bam; md5sum=b32c92e3bbe827be3be546b72e8f040f; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep1; type=bai; md5sum=764ce8f1f0d9934b778a3e49df721000; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2; type=bam; md5sum=12a595c26af0bfa2735cbf9ef0b334be; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaAlnRep2; type=bai; md5sum=baa61168c5b67302cb49cd68910ef05e; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc2d1f89863f7d49b5561d2ff19ec270; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5e67d5ad2378954dac6d7257ab42cd50; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5f7b34f801f5bd2733df18abb149c823; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=44ae101c1bf9b7826c9951b52692bc7f; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=283c83c7ce7bae14595bee7213e52645; size=352M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=d924ac0849191629d21b4855211cc312; size=387M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3133; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=c7981359e0191f555ebed15ad3c51b1a; size=370M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3236; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=278e344f7123faeb36e08e64ac2c6df6; size=408M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPamContigs; type=bedRnaElements; md5sum=cf4327870ebc06b3014a7146279146d6; size=16M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6936; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b24670957a13835476d272eb69643cbe; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4548; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fdebe77f001278d1cf724e2e7e57ac3c; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ef14e83b3f283793ea40a9ca013e291b; size=8.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7443; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labProtocolId=003N-,004N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=34f00aac7bc9a743e91034f31ac06048; size=9.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4548; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b404b04740c9d05525303ddd219d0a7d; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPamJunctions; type=bedRnaElements; md5sum=34d1e53e245de0e604e17687f73c5677; size=6.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=6575c2058d48dd1a21c4153ef333b65a; size=433K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=ba7b60a7f1e964098438e17b9d603a3c; size=430K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4215; geoSampleAccession=GSM767853; labExpId=LID9197; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=397704a68455fa92aac1240c253e559f; size=194M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4209; geoSampleAccession=GSM767853; labExpId=LID9198; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6612d5d0a231072656dbc1eda7af77d1; size=123M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3609; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ba909fa46154d4041a0231998f48cb14; size=38M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7443; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labProtocolId=003N-,004N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=25d94a1ebb57280fafe1e0ccb9adb9db; size=9.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000187; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4548; geoSampleAccession=GSM767853; labExpId=LID9197,LID9198; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPamTranscriptGencV7; type=gtf; md5sum=58ffa71c7a4a6647ce8c296e244691a9; size=4.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1; type=bam; md5sum=94d505d54ee07a68e2a0afb193a8b565; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep1; type=bai; md5sum=7487261f6ee3200dd9aa12b768e82545; size=8.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2; type=bam; md5sum=8e859e16bf00ff71cf55ffc322ac6126; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapAlnRep2; type=bai; md5sum=9715cd9a9d52c65920c02b07fbda3c7a; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapContigs; type=bedRnaElements; md5sum=6f5e26cc17c36b63dbf6591d2797427b; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6981; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1fc3d65d77e05240e3482d8572d4ff32; size=7.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4601; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=124aa41c8c51ceeedc189865951d2b6a; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1c5c74e824e949024be76652adf53bbb; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=91a109ea3435de4ce301abc4e7b1f92a; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1f5b9f02a2c212e704900b37f2262f8b; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=df3c4fd68fc8a91f42f41d05aa490508; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d3b5fe23587350a70f8572dce9900acf; size=4.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7494; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labProtocolId=003N+,004N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=dad311c5e25bd468fc8e3eab75256bf6; size=3.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4601; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6d16e1cb873a206f8fa7e142e33ed350; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapJunctions; type=bedRnaElements; md5sum=9e86ea08631e42b94293a0c3f0df89e8; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep1; type=bigWig; md5sum=10d233aebd8034afb482997de40d2681; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapMinusRawSigRep2; type=bigWig; md5sum=75bfde2a99aecb7b2682e97f8e2f676f; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1926; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep1; type=bigWig; md5sum=d6ff052c7dbd870e814b14412a3311d8; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1927; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapPlusRawSigRep2; type=bigWig; md5sum=2cb8be0f9da7a89b66bc76d766d1c639; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=54a5e4f16ec0119f59ba78d0d7b4a680; size=680K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=000efc74ebd1747852f26cc489f016b3; size=663K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4290; geoSampleAccession=GSM765386; labExpId=LID8532; bioRep=003N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3e615ebb2cce9d3642919e176ae5b977; size=85M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4235; geoSampleAccession=GSM765386; labExpId=LID8533; bioRep=004N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=cca01e0179dd052fcbe9c9c8ac4f5cd2; size=72M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3610; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5a7317d04ad9c83757d00ce2c02d40f5; size=26M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7494; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labProtocolId=003N+,004N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c332b925e874673d309450c5aac603c3; size=3.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000170; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4601; geoSampleAccession=GSM765386; labExpId=LID8532,LID8533; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqGm12878NucleusPapTranscriptGencV7; type=gtf; md5sum=df234c828abefc772096a7de60377bb2; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1; type=bam; md5sum=6587e586e376b989854a3040fa929b95; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep1; type=bai; md5sum=9665e433d9bf71c259ba331df36d71b9; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2; type=bam; md5sum=36059f397cf60b1e8ea84869370fc020; size=9.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaAlnRep2; type=bai; md5sum=97b5487eecfb086676efc7ecb1b73a46; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0ac00753f03075f147ed811301f6346f; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=00776d5b2e65d39fa40fc75d5cd4dda5; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=74f3a3142687398fac3e959c0815a849; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2d6c22c27bfcfbc3f55ff17b9e28957b; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=1459ea72e379f4bd3e0bc95c1d312bf0; size=978M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=a8d9bffedf9ef92fccc7ae258497fe96; size=1013M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2457; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=db427450bbe33bbacef6827974d5991c; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2407; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=9412fbc46be578063753f90581b0244e; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPamContigs; type=bedRnaElements; md5sum=4b3ce0510f29bde9d53ddc0c5c581848; size=23M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6974; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=5ba124d1bba5b8367433f7ffd4e94df6; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4593; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0857ea5b411432532b9353c20ef7de0; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c8722d22c9275939464c210971cfde1b; size=4.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7486; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labProtocolId=005WC-,006WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c09d9cb7b20fa91dc52ea17d98627cd3; size=6.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4593; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fbfbfe3bc4ce12d93d16badbc1ebfe42; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPamJunctions; type=bedRnaElements; md5sum=8da3bd5b322040a9d27cf42b28ff686a; size=7.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=acacc8ac30e9d17a94d808d0fe052fa2; size=435K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=c71467bda89291016b83ed056f4605c7; size=435K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4226; geoSampleAccession=GSM758573; labExpId=LID8663; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=ec89b5158a63ef196239a7c1268ca72e; size=210M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4239; geoSampleAccession=GSM758573; labExpId=LID8664; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b7e0143de840f52e9a66bc44ce12e87d; size=199M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3613; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=010bd3b0b65db9e92dc23834d887566d; size=23M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7486; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labProtocolId=005WC-,006WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b4a1a27855cb304f8c72348187fb783; size=6.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000149; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4593; geoSampleAccession=GSM758573; labExpId=LID8663,LID8664; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPamTranscriptGencV7; type=gtf; md5sum=ec694f5f753af8b0f8b0236a28f43909; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1; type=bam; md5sum=9dabe8fa9819a00a4ba8bb634b4e7e61; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep1; type=bai; md5sum=8e43fd77132b680b46d6dcb8e6000a92; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2; type=bam; md5sum=458f9da89a28a39425dca1d224faa227; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapAlnRep2; type=bai; md5sum=ad9c441e1185b46c833c5f305e9f94ea; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapContigs; type=bedRnaElements; md5sum=78a6e5af93abb41f03acd53ae57e0e30; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6972; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ee8a134ad51c9f9b2ce7251b78fafbd6; size=7.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4592; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0ea45ca7430d0c34ebb24c944b8da81; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3e5aef31355e188731b4f0e9988b1e65; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1cd19e04f2194bd528607a5468179163; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3e25f46499f7c2ee448007ee34194c32; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7d19d87f3e61ecf2c1be96ebbd1ef66c; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5c370cd0105db9837ef04d8aa0505af5; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7485; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labProtocolId=005WC+,006WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bde3297dbe2c5d5b2dc10f50f17811ab; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4592; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3e912334a1f731fe1de54b792f3d5bc0; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapJunctions; type=bedRnaElements; md5sum=aa751f5d2b71f86a05808c9def152ed9; size=9.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep1; type=bigWig; md5sum=48f840994b1c0d9705409a1f4566d0ca; size=705M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapMinusRawSigRep2; type=bigWig; md5sum=b77ebc1983989795f0c9def09f6622ed; size=608M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2098; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep1; type=bigWig; md5sum=2655b4036e2193b4d0d1648d88101b21; size=739M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1929; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapPlusRawSigRep2; type=bigWig; md5sum=ca7cbf571fc15cb83af527bf7c7b77a9; size=636M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=452993de86eb398a9dc7777f41b080a9; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b1e877c1253a348f304b14f41058605d; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4223; geoSampleAccession=GSM758566; labExpId=LID8461; bioRep=005WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2cd4061a0d6275b6124f1a4677de004f; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4265; geoSampleAccession=GSM758566; labExpId=LID8462; bioRep=006WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=0c035cece8dff21c946d52fd87ab2e4b; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3614; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b37fe5a16622424916b483bffa9eb9df; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7485; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labProtocolId=005WC+,006WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e5e747195a6352cd522cf8d76ed35584; size=2.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000150; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4592; geoSampleAccession=GSM758566; labExpId=LID8461,LID8462; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCellPapTranscriptGencV7; type=gtf; md5sum=cdc28cc78fac341a5df61f605c71e98b; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2; type=bam; md5sum=8231e66c25359651f21d589872b2ec0d; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaAlnRep2; type=bai; md5sum=82d09fd0c676def20021b2adf1c832b5; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2dae419d63cc41b74d6690b7804e329c; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=12857a667d3c2a89ed7317653caa8cf2; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=bc0fc5389801c015f08204260af3c9e0; size=39M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3221; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=48cdf386743565a8cb81e6e1b76f3054; size=40M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPamContigsV2; type=bedRnaElements; md5sum=9c80466f57606bf14dde4c40c379a673; size=15M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6930; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=07ab029e2d7af15e91291d16d820a42f; size=3.9M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4542; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=41bdfc4eed5b8b51b4cbe2029ec71923; size=16M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3615; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4defbc733193d97212c3754237e3de29; size=597K; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7435; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labProtocolId=006C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f34328996d105f39ea5b07b85492a5f1; size=688K; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4542; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0a609ed4583d429e84166a5c5020cc8; size=1.8M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3615; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPamJunctions; type=bedRnaElements; md5sum=bd43a50643e2de5fdcfa03e015d272a1; size=2.0M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=47256509c23d8601ddb605559c61dfaa; size=495K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4185; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=f8bb1dec752969f64510095fdf732e31; size=136M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3615; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e65c0ae5a928665d3691f69ffe13db58; size=4.7M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7435; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labProtocolId=006C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7aa7db124977c3d5dc5cd4dc714e91f3; size=1.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000198; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4542; geoSampleAccession=GSM767842; labExpId=LID18549; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPamTranscriptGencV7; type=gtf; md5sum=f86b898f0262b8a9f665c8cfbf821380; size=4.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2; type=bam; md5sum=350490d4a0accd1d6746fb0ef32559f7; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapAlnRep2; type=bai; md5sum=9e087d6bb68d71cc35ad9a027f58ae3b; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapContigsV2; type=bedRnaElements; md5sum=c17352057543efe23a38a032d5206ae8; size=18M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7007; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fb9a7ef5ef48a4b47b1984704a824e6d; size=5.9M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4582; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=facca7b41e035f10db758f5ebba0625a; size=17M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1baa03edae04f55a2ac39d56df382866; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3a362cf06c97d3ebaee0756b54fde35b; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3616; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b66dfcc78bea3683a27ff42c816eb7b7; size=1.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7475; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labProtocolId=006C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=940dd0021ee554eb679b6f342d20024a; size=949K; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4582; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c008bb8e2df6737eb0994d68f3fcedbe; size=1.9M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3616; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapJunctions; type=bedRnaElements; md5sum=7864af4790692f5ac939e49e8d72d620; size=6.5M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapMinusRawSigRep2; type=bigWig; md5sum=fb64f13b01908023eb72f7d55fe2f9da; size=614M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1912; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapPlusRawSigRep2; type=bigWig; md5sum=91c6ddc34ae22add45c8dc8995f2aa90; size=640M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=5a5238345eadeb349d9811169fb7eeb1; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4280; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8164939d1b1cdf14a015adafe3251bb5; size=50M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3616; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0488d9106305f5f568cd4ef81ef63700; size=12M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7475; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labProtocolId=006C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=404b53e8f5e381928f95be2a21cb09af; size=1.4M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000151; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4582; geoSampleAccession=GSM758570; labExpId=LID8536; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescCytosolPapTranscriptGencV7; type=gtf; md5sum=e0a1adb811dbc02b077471438694c58b; size=4.4M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2; type=bam; md5sum=da4d32efab8724e163ddc4aaf067cf46; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaAlnRep2; type=bai; md5sum=d6b69acb1e1b42e680a21c711c5c8183; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=615246d77d6220e46909b07306a5739a; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=eecb69785729ef18cb36c62cdd714522; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=1e5b7a30777eb17c3c13855956772da4; size=282M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3227; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=192709bb1092dbb61cf4b4084a223d5c; size=300M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPamContigsV2; type=bedRnaElements; md5sum=6ae8fee3d1783de59058c2b87accac61; size=31M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7019; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f3d3e5332869351903b695461963d1fc; size=11M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4590; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fd45178ad296596be4f257b1d0112846; size=16M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3617; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=47c04c87f7f8a865fe4ab821d1283687; size=5.4M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7483; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labProtocolId=006N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=7e667881ead92e2485b5bf4379b10477; size=6.5M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4590; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3e765235b5501d8d18df6ffd6dabd2bb; size=1.9M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3617; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPamJunctions; type=bedRnaElements; md5sum=9f519ebfce233184c0c644c29e0ad225; size=3.8M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=428a41c77c161b82eec28b70d6d45eea; size=423K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4287; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e1850cfd66a872ddf0a0639de065af23; size=148M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3617; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=899c8b53877ccfdf9ef0dcdee4976254; size=27M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7483; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labProtocolId=006N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=509d49df5c7fe202b5458f75d67d82eb; size=7.6M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000199; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4590; geoSampleAccession=GSM767841; labExpId=LID9199; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPamTranscriptGencV7; type=gtf; md5sum=4e10275fc335bb20ab1b7ef7cf8ea6c8; size=4.3M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2; type=bam; md5sum=0aee237b1e06812fca29dee76a513af6; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapAlnRep2; type=bai; md5sum=6a12fedb69dcde7448196df95ad85b65; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapContigsV2; type=bedRnaElements; md5sum=176c4e16dd881a0bd718857f5a58fa25; size=28M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6999; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9919fe8c144b4089acc81a568cb4d765; size=7.6M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4570; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4066ad6464b7597e2094a737a3a79eb3; size=17M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3fdfe0196a4bb1c07f836a500b8c5b0c; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=829d61847bc20a2b6316fb905ef47496; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3618; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f4d902fd1ad922d41c6e96f755244377; size=2.5M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7463; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labProtocolId=006N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fcf72a0df06aaad67793184aa6856b00; size=2.7M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4570; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2daba672a0149f586c6bb7600ec3975c; size=1.9M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3618; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapJunctions; type=bedRnaElements; md5sum=b707c8043b87b986a062d2891317ee7f; size=6.6M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapMinusRawSigRep2; type=bigWig; md5sum=6f97cdc336e074180f449c60724ba62a; size=882M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1913; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapPlusRawSigRep2; type=bigWig; md5sum=ec3c832062261141ec75fed2f2561a30; size=920M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a5922c7cf5472bfad51741aaba929a2a; size=573K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4270; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=110184cbe5abc0dccdc820dc7f775ea9; size=144M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3618; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e0112810b25b82608cada28e948c10a3; size=18M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7463; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labProtocolId=006N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b9cdbf457f4a392bad2171b46a6fce53; size=3.4M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000152; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4570; geoSampleAccession=GSM758574; labExpId=LID8558; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqH1hescNucleusPapTranscriptGencV7; type=gtf; md5sum=ecb8ac1a6b0d7b6c57de2792f5500c71; size=4.4M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2; type=bam; md5sum=c0d0cf8f07632805bb735abe87c17ccb; size=25G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalAlnRep2; type=bai; md5sum=a63cd672d49b7522c899b1f0772f0b0e; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=aec49289304649e000aa16327b32df6b; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dc5284a25b783eceb25dfe80f7b0c67b; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalMinusRep2; type=bigWig; md5sum=09f5a3a6ab33e4e4fdf3ca41c63fe8e6; size=367M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalPlusRep2; type=bigWig; md5sum=eab3ba43b807f302a1630797eeae5b0c; size=374M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoaf609010111CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=65ebed69f15969e0ac4395ccb61121d4; size=190M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1; type=bam; md5sum=1995bd76774f0f0edee755824b8c43fe; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalAlnRep1; type=bai; md5sum=db8089847d54b33a57663b2edbbfcdf1; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalContigs.bedRnaElements.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-06-29; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=055WCt,056WCt; md5sum=34d9699c6e975fefb0ed9aed90c8f6ac; dateUnrestricted=2013-03-29; size=19M; dccAccession=wgEncodeEH002679; replicate=1,2; view=Contigs; labExpId=LID47020,LID47021; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalContigs; subId=7193; cell=HAoAF; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984614; donorId=6111301.9,6090101.11; bioRep=055WC,056WC; lab=CSHL; type=bedRnaElements; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6988; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=2694a571a367f0ee201662729bef8771; size=15M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6368; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=fbcd4158874cbbfaa1a36ebf9b82e5e2; size=18M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4545a4ff57f7f2fb0f890d8a3fd6a228; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=96439e78fb98dca3ca993cddde0de84d; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7406; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labProtocolId=056WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=a0a4c59dcea249f3f8b72f0121cbdc23; size=3.8M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6368; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=30a677e742c263fef277f81a2cf4b001; size=1.6M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalJunctions.bedRnaElements.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-06-29; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=055WCt,056WCt; md5sum=c80e69edc0c4c6b7e1cd704bdca7bb68; dateUnrestricted=2013-03-28; size=19M; dccAccession=wgEncodeEH002679; replicate=1,2; view=Junctions; labExpId=LID47020,LID47021; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalJunctions; subId=7195; cell=HAoAF; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984614; donorId=6111301.9,6090101.11; bioRep=055WC,056WC; lab=CSHL; type=bedRnaElements; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalMinusSignalRep1; type=bigWig; md5sum=bcb10e1f55639687f6e44222641a2744; size=127M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalPlusSignalRep1; type=bigWig; md5sum=7609eff7681ef2c5136d7f153b384e2c; size=130M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6871; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=e8bda9a226ac7fd929c555822881c5ea; size=297K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7191; geoSampleAccession=GSM984614; labExpId=LID47020; bioRep=055WC; labProtocolId=055WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=306d35582cb87aab0e95c7d5cc8120d9; size=189M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7406; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labProtocolId=056WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=642d004d26edbe002ade3b67c3c55f38; size=4.6M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoafCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HAoAF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002679; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6368; geoSampleAccession=GSM984614; labExpId=LID47021; bioRep=056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoafCellTotalTranscriptGencV10; type=gtf; md5sum=a2eabbc479506e95f68652076a39acb8; size=4.4M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1; type=bam; md5sum=f20dfe9e07574742d8e8a96076cad9a4; size=25G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalAlnRep1; type=bai; md5sum=cf889319ae93ab4ff69dc6563e9986a5; size=9.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoec70717061CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=cda6c79f1c5cd5b7cab4cbc3e3bc77ce; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoec70717061CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=efeab6a097f964a6680fec354fff2dec; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoec70717061CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalMinusRep1; type=bigWig; md5sum=c337ddd4e1e09072747176d7698f583b; size=399M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoec70717061CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoec70717061CellTotalPlusRep1; type=bigWig; md5sum=9f5aa2a7e09af101704bae70a6e346bf; size=404M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoec70717061CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5874; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=8a602103e721c62ff3fd6ac82ab99d11; size=134M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2; type=bam; md5sum=4ec272444b78e7ddafca868c75c98fad; size=25G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalAlnRep2; type=bai; md5sum=20831ae47875a742a29b0f0f2d244b1e; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6030; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalContigs; type=bedRnaElements; md5sum=d2dee2786ea0625a9342b3ed65af3d53; size=26M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=fd14aceb9950d2f7493e82d6ec96e313; dateUnrestricted=2013-03-02; size=21M; dccAccession=wgEncodeEH002680; replicate=1,2; view=ExonsDeNovo; labExpId=LID47022,LID47023; subId=6947; cell=HAoEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984618; donorId=7071706.1,8061102.1; bioRep=057WC,058WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6376; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=249169b333a2db8b14e336d024dac7ca; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=2adbc8d2c6557c1ff832245d0916c737; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=876f792b3de5aff293c2b9839fb3f1b5; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=057WCt,058WCt; md5sum=1f5341da140c52a07408623e07cc27bc; dateUnrestricted=2013-04-16; size=6.1M; dccAccession=wgEncodeEH002680; replicate=1,2; view=GeneDeNovo; labExpId=LID47022,LID47023; subId=7412; cell=HAoEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984618; donorId=7071706.1,8061102.1; bioRep=057WC,058WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6376; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=1502f78d629d66ad71152dce4156de49; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6077; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalJunctions; type=bedRnaElements; md5sum=2c2e1230a24dd8872e5f152781e1222b; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalMinusRep2; type=bigWig; md5sum=b22af9bfc9d1d1b4c854ec125b3de8b6; size=338M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalPlusRep2; type=bigWig; md5sum=0eadd39b79ce4507e535612b19271564; size=344M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071706.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6895; geoSampleAccession=GSM984618; labExpId=LID47022; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=a689023a15023db28a7fe3711339e926; size=270K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6896; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9bb124b2f404aa42aa4aafbca8dcf74f; size=292K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5994; geoSampleAccession=GSM984618; labExpId=LID47023; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=b05a055223a788374a91f0e2905f0d40; size=106M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=057WCt,058WCt; md5sum=80c5fffa8547a1e37e3073364e333a8b; dateUnrestricted=2013-04-16; size=6.6M; dccAccession=wgEncodeEH002680; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47022,LID47023; subId=7412; cell=HAoEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984618; donorId=7071706.1,8061102.1; bioRep=057WC,058WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHaoecCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HAoEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002680; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6376; geoSampleAccession=GSM984618; labExpId=LID47022,LID47023; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHaoecCellTotalTranscriptGencV10; type=gtf; md5sum=3e2718c6980d67fb340980c9a09ad6b8; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1; type=bam; md5sum=36fbf385292332bd7b4ccb905ed2b45f; size=30G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalAlnRep1; type=bai; md5sum=f3da6d27baf72380d68aaeec91513496; size=9.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch00113082pCellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0b4fa954aa0cf2419acd1cbd6b4c0362; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch00113082pCellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c9731151eb5329377f29ab04e99fdd3d; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch00113082pCellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalMinusRep1; type=bigWig; md5sum=1d14cf8d5c47ba3e13c11cc978d47344; size=370M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch00113082pCellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch00113082pCellTotalPlusRep1; type=bigWig; md5sum=85f89554f323ab1fc88bcf8bf2a38d37; size=377M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch00113082pCellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ea7692246dda170c78122032cccc3f8d; size=161M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2; type=bam; md5sum=1c3b65dc9d9488b6bb2073f2269bd712; size=26G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalAlnRep2; type=bai; md5sum=a85ee6f36f1ad029f7928a7cdc4fea09; size=9.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch81008082CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=443e00af187743ba7bdf21003e519370; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch81008082CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=071cd0a130551db80d6e92d96a195dd1; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch81008082CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalMinusRep2; type=bigWig; md5sum=b3eb5300e4d2472a5435c16f2b094d54; size=419M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch81008082CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHch81008082CellTotalPlusRep2; type=bigWig; md5sum=e93bf22120127d4729babf3b93cef176; size=427M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHch81008082CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5866; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=59b247a18830ef599423616ea03d475c; size=126M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5996; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHchCellTotalContigs; type=bedRnaElements; md5sum=6f1b44fa5f4ddcc9799558c50d765312; size=32M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=b5b192ed34853d3f3d0eb1d1fa28b3f6; dateUnrestricted=2013-03-02; size=22M; dccAccession=wgEncodeEH002674; replicate=1,2; view=ExonsDeNovo; labExpId=LID47024,LID47025; subId=6980; cell=HCH; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984611; donorId=0011308.2P,8100808.2; bioRep=059WC,060WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-26; dateUnrestricted=2012-12-26; subId=6347; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6d3a46a80ad1551c3af9539293aad5b4; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=059WCt,060WCt; md5sum=09852650f833cbad943611ab1a0da055; dateUnrestricted=2013-04-16; size=6.6M; dccAccession=wgEncodeEH002674; replicate=1,2; view=GeneDeNovo; labExpId=LID47024,LID47025; subId=7432; cell=HCH; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984611; donorId=0011308.2P,8100808.2; bioRep=059WC,060WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-26; dateUnrestricted=2012-12-26; subId=6347; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=03c0fef34e55a0236ede16fce7b5056c; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6048; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHchCellTotalJunctions; type=bedRnaElements; md5sum=9d48eb1d7cf48a72824abf991248ff70; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6868; geoSampleAccession=GSM984611; labExpId=LID47024; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=889ecb82aadcfd9395eba7186510aef8; size=300K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8100808.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6867; geoSampleAccession=GSM984611; labExpId=LID47025; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=d0a7bb9ade3909ecbdd4b9208a5c1e41; size=329K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=059WCt,060WCt; md5sum=5a50b404011d464625e7d6e8e2bfc891; dateUnrestricted=2013-04-16; size=7.2M; dccAccession=wgEncodeEH002674; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47024,LID47025; subId=7432; cell=HCH; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984611; donorId=0011308.2P,8100808.2; bioRep=059WC,060WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHchCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HCH; localization=cell; rnaExtract=total; readType=2x101D; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002674; dateSubmitted=2012-03-26; dateUnrestricted=2012-12-26; subId=6347; geoSampleAccession=GSM984611; labExpId=LID47024,LID47025; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHchCellTotalTranscriptGencV10; type=gtf; md5sum=9c9d6c5b03161cd3b82f1bca03c23b4b; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1; type=bam; md5sum=1856b9720ee5e59f1c92549c55f3e134; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep1; type=bai; md5sum=08ddbb303c7dc31fa8028b2f44448ba4; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2; type=bam; md5sum=31eeda4a3395cc13d75e10ecf41aeeee; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaAlnRep2; type=bai; md5sum=d992f3cf35cda56b09fed8c29b7dce0c; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8d51b2026f83b48a4dabcf941d51e5c4; size=4.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7c4b399b7a073c520d3501ff959ab51b; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a46cf53337f2c07ac5fff86f0aea32f8; size=4.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2a5b4d71dbb46ce00ab958f2728fa020; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=5044e4377722e5f4890cdc31068d895d; size=160M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=b5d7cecee2e5d5a98eebfd6a0635c546; size=203M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3486; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=3b2dcd9f6aa6ce0401ef8184a60c5aae; size=162M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3140; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=8528af1b3affa677a8f8d9d676a2b5a7; size=211M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPamContigs; type=bedRnaElements; md5sum=4fa910c7c2c7830ad7599080cd87aa6a; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7022; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=d5d2df96fdb30fcdb3d22f01aa28d7fa; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4599; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=eea2814bfa951876382d20bd0c270d87; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a05fdb706b885cf69525dceb4ad00a14; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7492; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labProtocolId=011WC-,012WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=87542dfd847852a306561ff4674565fa; size=6.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4599; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0dcdcd4aa82b92d003e87d2c3502001c; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPamJunctions; type=bedRnaElements; md5sum=0f4833761c453707dcec2a14363c54fd; size=6.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=13874e328fa2232224ca25b402fc9966; size=446K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=570cdadb89451576591d4fd2f67836c8; size=449K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4229; geoSampleAccession=GSM767847; labExpId=LID8790; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=7e9ef789be6d28a01013ba0d7103c4af; size=109M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4256; geoSampleAccession=GSM767847; labExpId=LID8791; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5ad2cd65ac671a8957a6396950ab4f44; size=118M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3629; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fd03032cd74b3a9b440f84a17dfbe741; size=22M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7492; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labProtocolId=011WC-,012WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d5e6510da6ddd143037b8eef02f9a5ef; size=7.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000191; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4599; geoSampleAccession=GSM767847; labExpId=LID8790,LID8791; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPamTranscriptGencV7; type=gtf; md5sum=428e7f8ff2edbba7c3de47e8da2e8b77; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1; type=bam; md5sum=a20005281551a16e20382ca7316cc009; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep1; type=bai; md5sum=bb8048fef0b1666ae3e4f874bb73c825; size=6.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2; type=bam; md5sum=1a2705518ff2cbe67e73d747d3128093; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapAlnRep2; type=bai; md5sum=257ede3fdaab9f7c44695eac9e71dd8c; size=7.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapContigs; type=bedRnaElements; md5sum=62dc3de75d8b4cab7ad9c17dafe80b7f; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7008; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=539a452f6072c58b71d465aa0c6dbce0; size=6.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4583; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=107643cca70f120132dd974bab3752fe; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=24f8090a9e28d9722098bfb61d54705d; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fbb0b9dc6320fec162ac69872ad9c953; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=427418b750bde4095ba951cd6ed3b1a0; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fbb1ecaa10cf5ce98a476ae2d7fe3972; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fe9ea984682d7efd271bb91b95aec20f; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7476; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labProtocolId=011WC+,012WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c6e4603e50e9396ab777f3e10cb661b6; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4583; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b6a25c6c8e577edf94e8a28f41f0f3a; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapJunctions; type=bedRnaElements; md5sum=35f85c735228e0213dec2e4d6e4a26c8; size=9.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep1; type=bigWig; md5sum=4c8133208746d95a84534516be4fb92f; size=638M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapMinusRawSigRep2; type=bigWig; md5sum=5cbe232463bd9917bfa89548688beef6; size=609M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1944; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep1; type=bigWig; md5sum=6b44a360b1e6b4f6f99cc00ae766c98d; size=667M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1957; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapPlusRawSigRep2; type=bigWig; md5sum=447bdb59952394559f8e6a63e3cf5cd6; size=631M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d128dc23d273cc9fc208290ad076b3aa; size=965K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=405e40af44b1672d51499d92a9567ca7; size=955K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4193; geoSampleAccession=GSM765402; labExpId=LID16633; bioRep=011WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=92e807186eefc7c62c4ba06eaaf8a341; size=295M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4271; geoSampleAccession=GSM765402; labExpId=LID16634; bioRep=012WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5ad790d4332b1a006777dc5481a3d696; size=334M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3630; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=799b06bc4e977d51e4f32e39a3f64041; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7476; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labProtocolId=011WC+,012WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=64bc17371e0e27f287778cb249772169; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000173; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4583; geoSampleAccession=GSM765402; labExpId=LID16633,LID16634; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CellPapTranscriptGencV7; type=gtf; md5sum=bfc652a537cfb67a2720bab6006476c0; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2; type=bam; md5sum=7065046372bed2d578375ea05491eeee; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaAlnRep2; type=bai; md5sum=30cb70b6553c7566d6ca68312cbd78c9; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c9876de6130f545c3c972a7bdd42b685; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=80ff31515d5c97d88a8d0c048697de64; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=994f692cfdc2f868f2a9b0d2a7e8adc9; size=40M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3223; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a47f6dba257a0e77c6c0dec9dc4e619a; size=40M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPamContigsV2; type=bedRnaElements; md5sum=ddff3265691dc3fc950931b2b6ff5efd; size=8.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4577; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=208753e65f5db04e59ba5f33d6206968; size=16M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3631; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a4ebc691e01b20043e9aa0564a9e0d9a; size=430K; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4577; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7da86012a646c5fe126e8b49fc1955f4; size=1.8M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3631; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPamJunctions; type=bedRnaElements; md5sum=6a70d7f136b54fecd0a181bc1e13d004; size=2.3M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1eadb02502cfcc166a19472be95eab7f; size=504K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4222; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a653573f697eadcbfdd54d96edfadfb5; size=73M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3631; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a85c5c335f12025b0f2c6d3426eeff99; size=4.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000201; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4577; geoSampleAccession=GSM767838; labExpId=LID18551; bioRep=012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPamTranscriptGencV7; type=gtf; md5sum=3c5ec3a72ca4d688e02499761fbaed55; size=4.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1; type=bam; md5sum=fc751da26061a6af4e702add69c06063; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep1; type=bai; md5sum=f35d3b2587393165866444a8b398dc66; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2; type=bam; md5sum=812d9cfe01e95848de5addb95ced8693; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapAlnRep2; type=bai; md5sum=a9f905c5e1544a80c4d4e30ba4872f7f; size=6.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapContigs; type=bedRnaElements; md5sum=5cb1bc3458ff89dc1293ff076de42f3b; size=9.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6933; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3b080972f3608d75cc06a5b187bfec84; size=5.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4544; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=838068301fe6bbd34cadb9419825d429; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6d6818ad225c1c9a7c6428fd2b954f5a; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=edef2f6d14eff28b504f880b327bdc56; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=14fbcdf4ed9b10922d18706e78df6c3e; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ce05a57c8ce512f3891407d05ce9506a; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8ac19bfa98dabee3abfdc28219ea9d6c; size=940K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7438; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labProtocolId=011C+,012C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=73622a7c5ce26c200200de1666ae0bd8; size=847K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4544; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7e044ceffd725524ed8cb4bc46d55817; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapJunctions; type=bedRnaElements; md5sum=5ce2bf7098bae9ae1ebaea317ef1d489; size=8.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep1; type=bigWig; md5sum=245a245e27347eda4d51298f3d5736a0; size=338M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapMinusRawSigRep2; type=bigWig; md5sum=ed62d554f38137c4f5c2514a969ea549; size=246M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1951; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep1; type=bigWig; md5sum=5f645c0f4a15472eb869054cdcf8f4ef; size=348M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2447; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapPlusRawSigRep2; type=bigWig; md5sum=4bed223c95320b5be4bc44a2d45a8510; size=251M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b2dd17e7cf84860c2e4202725a068402; size=956K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=aa3bda0ceca1d50b5051d05bf52bb574; size=967K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4211; geoSampleAccession=GSM765404; labExpId=LID8469; bioRep=011C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d03a1359d94ebe3238562a2edb10f339; size=85M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4225; geoSampleAccession=GSM765404; labExpId=LID8470; bioRep=012C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=ec00d7f55af0f8708242e407da7a0507; size=44M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3632; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5d78230cd8a5c3c2e511aa5e4e501207; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7438; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labProtocolId=011C+,012C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=736f1477d866458d23037d6d2af6f34c; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000171; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4544; geoSampleAccession=GSM765404; labExpId=LID8469,LID8470; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3CytosolPapTranscriptGencV7; type=gtf; md5sum=659226bc25503c3eb558801b3067a08d; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1; type=bam; md5sum=b5b0b465507a74cf38dd3f98ea0615fa; size=9.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep1; type=bai; md5sum=fd8ef750822258cfd2831ad3bfbbe737; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2; type=bam; md5sum=ae7bf866aabe6b680fa6f5126f7c5379; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaAlnRep2; type=bai; md5sum=5898b3ea22daed2fbd60d8997abeeedf; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=78e477be551b8394ca200034c18e2eef; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cd9c31d99d204d313b88cfad7712b978; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c1842737c5d6bf70388f6833f77e9c8e; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7b1b32c0f7a322af1f4269d2edc11de0; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=52ac5b0e92c018415f4559d0c81f96c9; size=264M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=c86a614861e683fcf21b5fa8165e4b4d; size=238M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3234; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=9983f6c69129879019b30794dae17b1d; size=272M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3142; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=36fd5aac5ec6fcbab48c4033ae60916f; size=247M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPamContigs; type=bedRnaElements; md5sum=29ef33f57ff665c38051fffd9ff80d7d; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6958; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9ea8cf865e0a4af1c0b978339df13e6f; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4568; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=288b42f97d9a9720322f8e1f877358e1; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=63746987c6f36f09adfb5c8de38f6636; size=6.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7462; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labProtocolId=011N-,012N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=dd6455bf36b0fa60fc5297a1241ef0b8; size=7.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4568; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9725a2c8c6513bac905fc6d80cb0b2d8; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPamJunctions; type=bedRnaElements; md5sum=04070b9f30799c4e4ddd5bdf923efe3d; size=5.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=5b8777f885902cf1eec417c0cfc4d361; size=425K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=184676f405a5bf49f5c404134ca20cd9; size=422K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4262; geoSampleAccession=GSM767848; labExpId=LID9200; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2395baee603cd0176bfbb816b0905b46; size=175M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4268; geoSampleAccession=GSM767848; labExpId=LID9201; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=dce885af61b9b3a9ea581e0a7d9555be; size=214M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3633; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6b400b3f45e0abafe9e6b154e95afea9; size=30M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7462; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labProtocolId=011N-,012N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=64eef1c5feac51ca193c46927ab74a55; size=8.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000190; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4568; geoSampleAccession=GSM767848; labExpId=LID9200,LID9201; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPamTranscriptGencV7; type=gtf; md5sum=c0070a8b58c74166d50981f8c36a9dbd; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1; type=bam; md5sum=813c186380c3244c4c2ce350cffe3477; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep1; type=bai; md5sum=e64d58d731e3744b6af32f586fce0f51; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2; type=bam; md5sum=0458e65b9a61688a2c0765d8804bf376; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapAlnRep2; type=bai; md5sum=2b82707be85a094881b1137677970d71; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapContigs; type=bedRnaElements; md5sum=3e9a3b425eec1cd4365f4675f7b34d59; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6940; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=46f4d8b2cd5cf47e975b31d3b37c33ae; size=8.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4550; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5622ca8772d4d7d44aa400f124758b50; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=237c5c2359e59900b2cec035bfa8e58c; size=4.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c8ba6ff3560188e8963952e0b9b92299; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f217b14e04c9f8f4a828ac743f546b44; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d82ddc56631eec1ad307ff9ecfcebbbc; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8f25334eede0a2c5f6cb39b7f4fc852f; size=2.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7444; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labProtocolId=011N+,012N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3551fb08c135486d5c6e7de069b50e04; size=3.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4550; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f91b8d10fab30779c4741d49ad0a51a1; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapJunctions; type=bedRnaElements; md5sum=7fc87f07402588abe204f8d3f01150cf; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep1; type=bigWig; md5sum=faf56e77529e066c90f63e24f354ea42; size=643M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapMinusRawSigRep2; type=bigWig; md5sum=fd1205720c176b81f44f5ea1528acdec; size=849M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1952; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep1; type=bigWig; md5sum=557266b8180bd31244553c99b0465a06; size=667M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1916; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapPlusRawSigRep2; type=bigWig; md5sum=bce19a1940459ae540e4477f3015e9ac; size=882M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0d8357b86b3e22f1263b8c19f9acd1ac; size=632K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=cacbf998f8d6dcbe14ccdb9489867d75; size=619K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4264; geoSampleAccession=GSM765403; labExpId=LID8559; bioRep=011N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8b36285f4a86c23b8dd232e9f49bcbce; size=136M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4272; geoSampleAccession=GSM765403; labExpId=LID8560; bioRep=012N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6e890269f6ed283edaa2627ab6e7a985; size=134M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3634; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1f8cb9a1410c079ae671b13e58dad88c; size=21M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7444; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labProtocolId=011N+,012N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7c976b0b5fef6e9fbef25f912f6831e6; size=3.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000172; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4550; geoSampleAccession=GSM765403; labExpId=LID8559,LID8560; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHelas3NucleusPapTranscriptGencV7; type=gtf; md5sum=6b3fadce4b87a43c7eb4572dba74ef84; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1; type=bam; md5sum=e36535aa0cc2fda1c3e7f4964030549c; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep1; type=bai; md5sum=a30db38a49b3775d94924fe115ba841f; size=6.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2; type=bam; md5sum=345146c1ee46e085878700238278e732; size=9.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaAlnRep2; type=bai; md5sum=785c4b5aae4928f1b01919daec0f5de3; size=7.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6543fd8068429b1390518f17c3ddccfa; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0d63040bde652cbc0aa4acb8e844dffd; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5ac7daccae2134a5c780ae7b35bda5d7; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c4ba1cd77ede57d6e271c136836932e8; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=42764d449a5308de0a679cbe4f4164d5; size=633M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=740eb1c8986ecc2aac1582e7d4772c41; size=205M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2409; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=387f757fc4749c868f0777f8672a6aab; size=647M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3487; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=e78ec2de531a3149d81cf24cac6350ac; size=213M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPamContigs; type=bedRnaElements; md5sum=9b76eb9ca54bc29584565123b5e1be8c; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7006; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=f0067f208c194486ab9cbc6991f4f693; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4580; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=403d13983ceeac1d8bcc76d93e8f04f6; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d49d4370a27a11ec414c528242ddab24; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7471; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labProtocolId=013WC-,014WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b109268067f2cd72feff679d371441f3; size=7.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4580; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d543c61de8d7a79d1215ff397fcc8d9d; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPamJunctions; type=bedRnaElements; md5sum=8db612081514779be01378e37c1deb0b; size=6.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f0bde7ebc7314b429c60b701faa42ea2; size=444K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8bb54454a42c80ba046c266211b65df3; size=443K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4242; geoSampleAccession=GSM758567; labExpId=LID8792; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=769bd5719acfd5bf5a25f6010ab6df6a; size=92M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4243; geoSampleAccession=GSM758567; labExpId=LID8793; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8349742b8d696170316d2648567d7dcb; size=113M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3639; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b1ff9047ab3173bdb93759332d2ea7d3; size=24M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7471; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labProtocolId=013WC-,014WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=12e3fd6336c4763fce20bb9b036ab3a7; size=8.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000159; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4580; geoSampleAccession=GSM758567; labExpId=LID8792,LID8793; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPamTranscriptGencV7; type=gtf; md5sum=32d56e71f5c4c1d9ddf67273313eb416; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1; type=bam; md5sum=02767a22e4364632f70602c093b00c19; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep1; type=bai; md5sum=6e35170cd88fd5d68d6528a4da16d2f3; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2; type=bam; md5sum=e7531cb62fdf924279ff59fe98c6b7ca; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapAlnRep2; type=bai; md5sum=aba8b3593d3bdef25b9c92a56b933646; size=6.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapContigs; type=bedRnaElements; md5sum=474b68a51b54a9aa9c0cc779aea1d31c; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6976; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=cc5a1dfbf0a816cc8b77beeb44e76e71; size=6.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4596; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=59875772bdde545b88515507e7c28473; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b17834c613b2d61fa49af8f76803e67c; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b9e475c2cc8ebcd349699f854b13ef09; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9d26323e10e6e7efc5867fc0a9e097df; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=afd552819c8302a3dcc25f6250aa9401; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e51fbc933370019393ff0e609a57c443; size=1.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7489; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labProtocolId=013WC+,014WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8450240c3ab87410f8b1fd2649a8a29f; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4596; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b12d7de7b32611ec2d39efe9b9f6d66b; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapJunctions; type=bedRnaElements; md5sum=995346018d6c6bd161e5cf3d1d19e6c8; size=8.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep1; type=bigWig; md5sum=a3570dbac8a696002bb3f26cda9778e6; size=607M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapMinusRawSigRep2; type=bigWig; md5sum=ee08612d34dd354bdd16954f5d7afa48; size=615M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1958; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep1; type=bigWig; md5sum=4f3410f10402a02ecee6ae18aaa1e940; size=617M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1960; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapPlusRawSigRep2; type=bigWig; md5sum=4dc923845a3133016d07c3dc038af96d; size=626M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=47b2f1be346ccc94c970cc4737e18dba; size=969K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4fb2eb51d9b74a39afb350210c6a9b2c; size=979K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4296; geoSampleAccession=GSM758575; labExpId=LID16635; bioRep=013WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b0c72bbb690057d49893833847e38893; size=294M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4277; geoSampleAccession=GSM758575; labExpId=LID16636; bioRep=014WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9e29e6e5e8fb0cbe79748aac1c264836; size=278M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3640; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b764de9b34267888b52ca8f7d7afa68c; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7489; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labProtocolId=013WC+,014WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3c7062e4e4ca8cc5c1221c31c1997420; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000160; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4596; geoSampleAccession=GSM758575; labExpId=LID16635,LID16636; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CellPapTranscriptGencV7; type=gtf; md5sum=893f3b0bba3479f34d39997e6b1af645; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1; type=bam; md5sum=7453e2b992f3c894677616e3bb0844e6; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep1; type=bai; md5sum=3c5cafea0e8545a2462a13b92bd4cde2; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2; type=bam; md5sum=eba85589846076ec0ccf33482142fccd; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaAlnRep2; type=bai; md5sum=4ffdd827c8c407cef3b6eddf5f05da2c; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b0dc2a32f4b6b2579cfddf5cfdd70303; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=70f9b992c09d9b6f39f6bc9cac6dcf7d; size=5.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f6b9c9e8edec6841e3f659a84c8fd6b4; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8e25d68e0d932a32e2dc0f8abc0a1ae8; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=043d823e2358cae0c0962a1057b0165f; size=41M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=eb73ebe1ca04fcf4f1f52c91b507b4eb; size=42M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3235; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=ef75f93a98c3fdbed457945dbbdc6b5a; size=41M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3228; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=6400a9d93e94a76cf5b15bf90d4ef3d7; size=42M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPamContigs; type=bedRnaElements; md5sum=bbfe05a677d620c4f50fb415f3d16ca0; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6963; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9df56e9eb9774ac90d78c77d0a6036b4; size=5.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4575; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=37974e38924b73e3eeda82489b176f8e; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=78785cb260b7f4d9931bab1f9215f0f0; size=573K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7470; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labProtocolId=013C-,014C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1204a1b867f67d3fe6a3947985bd9538; size=780K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4575; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3dd50eaac5119471d9bc311655d06143; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPamJunctions; type=bedRnaElements; md5sum=069a37e60d24a05bfb4c08f21a6e8270; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=3b918f701c942d61e87cc52ea2c4ab96; size=499K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=966dd1e971f2155364bc1ec02b76a4d8; size=493K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4238; geoSampleAccession=GSM767840; labExpId=LID18552; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=1e4c787bf1e62eeb5b67156720af0871; size=257M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4224; geoSampleAccession=GSM767840; labExpId=LID18553; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=440ee8acd1ab1421c2efdd8536b7e53e; size=218M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3635; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a92e9768767e58eb3e06d9b7049d5f23; size=5.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7470; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labProtocolId=013C-,014C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0311ef10ae950eb4dac093fbdcbd9b29; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000202; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4575; geoSampleAccession=GSM767840; labExpId=LID18552,LID18553; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPamTranscriptGencV7; type=gtf; md5sum=e55b2f826a31d9ab52178da76f9872a4; size=4.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1; type=bam; md5sum=75cab8575bcbd0bfdeda8ab7b7ac8488; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep1; type=bai; md5sum=8ccfbdd1a3e06679993a4ec43cfbd724; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2; type=bam; md5sum=2dbfb045cfb2d0a181c791beb5f7ea38; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapAlnRep2; type=bai; md5sum=403e9c51257deeb064513192599a988e; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapContigs; type=bedRnaElements; md5sum=e4427d443af5ea5b31c865e6f40783e2; size=7.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6983; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3ce4ccbb7aca7091c18f3a3732798ea9; size=5.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4603; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=50b81b264bcb287ebf491a29a4a30334; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9ac2aafa0070b2739d7c902b8ff6b8a6; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=66596b0d81963214b840701a8da3f064; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=aed7be97f8fabc23a940be2758307eb6; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=48f96d020555bad6816be7cfb1760a39; size=7.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=87c1a17ef8a1d61d54c10d70e0461cf3; size=878K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7496; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labProtocolId=013C+,014C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3c11669b4d8f0472701aae40793f4a5a; size=826K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4603; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5a293cd10effe631e05ad26aff4a41f7; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapJunctions; type=bedRnaElements; md5sum=a8324e9af4d1d139e24bc7424866b483; size=8.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep1; type=bigWig; md5sum=ffe9a17b7d8aca6252e188f12e572a96; size=272M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapMinusRawSigRep2; type=bigWig; md5sum=17682c32b25f99a6a780eb4501f1ba9a; size=270M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1959; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep1; type=bigWig; md5sum=3a5a1048f3b4570f66973f005b2f099d; size=275M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1917; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapPlusRawSigRep2; type=bigWig; md5sum=d8c4009c64ec275e061d5bc677d68ba8; size=274M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=93df0dbb56c5be0bfaf0697f3b2e22e6; size=965K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fd25f0434cc0f2abbb4c52a22ca893de; size=909K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4207; geoSampleAccession=GSM758576; labExpId=LID8471; bioRep=013C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=605de1da68fd725c4c11eabe3debb8d2; size=53M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4263; geoSampleAccession=GSM758576; labExpId=LID8472; bioRep=014C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=25e71fba212e7d4ffae30a709d6ddf99; size=50M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3636; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c8bc0807e5c1c2f521bb3bf3fe6b9697; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7496; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labProtocolId=013C+,014C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0a0c255c92a315d9d0452f654ac20d6a; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000161; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4603; geoSampleAccession=GSM758576; labExpId=LID8471,LID8472; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2CytosolPapTranscriptGencV7; type=gtf; md5sum=ca3fb1f5868d98d02724b76804c088e1; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1; type=bam; md5sum=6eeaba4c0dc3209e93db12ed5c67a448; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep1; type=bai; md5sum=cfa24fd2e83567a3fd83f4fc3358ddda; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2; type=bam; md5sum=608e2548db24a551f29ad873b1e20206; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaAlnRep2; type=bai; md5sum=547f1bb7fe89b5d4eff8a37326766b70; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=279128df63a6efdb3d416da13ef0b4b6; size=7.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e9f0dd362f7dcc7bac47a140dc76a4d0; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0675a78a84e99d882f5ad823a36a92e2; size=7.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4901abdb23f4205306d14e009396a9f0; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=65c1f1b45258084eec333072fa90f7ac; size=366M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=877a005e1aade3ce7b4567a6954830bb; size=400M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3143; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=23aba0762894353d50a4984232357d15; size=369M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-01-12; dateUnrestricted=2011-10-12; subId=3237; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=7711c9e19adbe5dd75a2776eeb2c0f7c; size=403M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPamContigs; type=bedRnaElements; md5sum=4423e86c73bf40af4657d016d10968e0; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6952; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=2dae1dac2584a96cdcd7fbf2ae0e5c53; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4562; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9de07c1d6fc329ac5ebfa5d20635c300; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b796f69f7cc40bb70cbd0217b7c9fde; size=4.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7457; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labProtocolId=013N-,014N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=975224823eec41a2ea01115b2679ef30; size=8.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4562; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=df0ce405a602d9436b625a157ef1125f; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPamJunctions; type=bedRnaElements; md5sum=3cd490bbe1ed9a0c14d56b6a901619b3; size=6.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e7e9fb61d5b7bf2b98ba738d5bed233c; size=422K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e8721e85a0d051b7c7750ee649d837c6; size=424K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4217; geoSampleAccession=GSM767850; labExpId=LID9202; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=10205eed0ee8b5790e96b88bd4734ac4; size=226M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4244; geoSampleAccession=GSM767850; labExpId=LID9203; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=1128cd5f38b06f022b2a1a7f8394248e; size=367M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3637; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2eafd6458b32b35c4ca16d96dcda1993; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7457; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labProtocolId=013N-,014N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b91971d9f3db58339beebea60d177d80; size=8.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000192; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4562; geoSampleAccession=GSM767850; labExpId=LID9202,LID9203; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPamTranscriptGencV7; type=gtf; md5sum=1977ce92dd35677147c30d7920ece2de; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1; type=bam; md5sum=8f2301473a5ab2167df14f49001bf426; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep1; type=bai; md5sum=77a4651bac4f805b014e7f8fa7d3aff5; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2; type=bam; md5sum=d536759e33b5fcc0aa401eef92ddffa0; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapAlnRep2; type=bai; md5sum=c99c1e50f9b11f8a96726cf3c8e63019; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapContigs; type=bedRnaElements; md5sum=84fe105b4847555a1ceb46224359ba02; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6967; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8a0eee9c48fd4cb8e75ea5b2bc7e6d6b; size=7.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4584; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5882e01a7a07139597a34871258feb50; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6344d68a7016073ba03fdac2333876b9; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a938650c48b17bde28ef48a7a69ca966; size=5.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c39c9d20d7f1f1a74b058f19a7e58fec; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b20517f2cd1d9b3d195885b6b3bb420c; size=5.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=54a3a7a8b9a3cd9eddaa0098ce870e9c; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7477; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labProtocolId=013N+,014N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bcdc8d66514785998b663d602e78da7d; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4584; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=317833359c8cf4f7587da4a959e426be; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapJunctions; type=bedRnaElements; md5sum=e437d292a49255a07e39a4d91710e3ad; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep1; type=bigWig; md5sum=9dbe57caae7c742e8c372975b1fe2b4f; size=938M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapMinusRawSigRep2; type=bigWig; md5sum=ea70564b90be7b50ec3afb6c089d2d24; size=828M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1918; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep1; type=bigWig; md5sum=e314f4755b4dc7e45ebe196e4c732a24; size=956M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1961; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapPlusRawSigRep2; type=bigWig; md5sum=d4bef61200d06bd10331bc60877aca01; size=843M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=eb7a5961e3e2cb2e44c51df91c016997; size=696K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=eaf767aff2e22e313dbd88ba1d5bdcd1; size=656K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4283; geoSampleAccession=GSM758568; labExpId=LID8534; bioRep=013N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=43fbc1d2f4903d5cf94f52f711d7c6ce; size=81M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4221; geoSampleAccession=GSM758568; labExpId=LID8535; bioRep=014N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=57169b1148950f8399012695ed61c71a; size=58M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3638; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7e0fb5c4bdbdf2332e3fc92796e29d2e; size=22M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7477; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labProtocolId=013N+,014N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ca7dd7e3616e0ef8a69fa0234a3d9c26; size=3.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000158; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4584; geoSampleAccession=GSM758568; labExpId=LID8534,LID8535; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHepg2NucleusPapTranscriptGencV7; type=gtf; md5sum=5118dcd4e7c0dcca6f33b6e4f4a39ae3; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2; type=bam; md5sum=386f0dcf410f4263891384a185718c0d; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalAlnRep2; type=bai; md5sum=f4b9916d1a6446d537bcde0d1691d489; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=ed6cc74e10a736016c9821da2ff1d4c9; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d4c3014899697e8e663529d45989e4d3; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalMinusRep2; type=bigWig; md5sum=ae09eca1e309413b82993364d87e2985; size=314M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalPlusRep2; type=bigWig; md5sum=ac639bc61b0b162ee7f55cdc501f38c0; size=326M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01005032CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5791; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=53e7dc5ac39e77985b3153f681a4d770; size=265M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1; type=bam; md5sum=fc0cf748484f7efb1778c1bbb3a52c6b; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalAlnRep1; type=bai; md5sum=abb58cab96ea330ae21cc065ba219b57; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4fbbc422c237f6c874d55a6a271ed961; size=9.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=3d69c2705efdc9b0f0f974ad9217eb82; size=8.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalMinusRep1; type=bigWig; md5sum=84c638b826c8bcc476c57002814d6394; size=206M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalPlusRep1; type=bigWig; md5sum=0aed39214cd311abaf81f24e1da8eded; size=212M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpc01027033CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5777; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=c0fb636d4f342592183a9569f0bbecb4; size=223M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6016; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpcCellTotalContigs; type=bedRnaElements; md5sum=317627e40fcde1236482b417517b4ec6; size=29M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6985; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=74801d1e34f1f1162831cf3c37ff2733; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6362; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=00aa9c4642a39f54a0191fd8c4e362f0; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7402; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=36b1f9952ee08c632a18ea2ae863983b; size=4.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6362; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=df19100d44ef45c3351327a35896d25a; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6049; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpcCellTotalJunctions; type=bedRnaElements; md5sum=64a50c8be42e4953399f739fa06214cc; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102703.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6890; geoSampleAccession=GSM981258; labExpId=LID47094; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=0c944e6e445e5f9a5333196ac37632ef; size=247K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6904; geoSampleAccession=GSM981258; labExpId=LID47095; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=12f320e3ddeb4907fc55ebdbfb633107; size=254K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7402; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=fd9aea94ef03641dc011557aa867de83; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHfdpcCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HFDPC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002671; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6362; geoSampleAccession=GSM981258; labExpId=LID47094,LID47095; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHfdpcCellTotalTranscriptGencV10; type=gtf; md5sum=4038e786a1e774082a684ad7bc8ee59e; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1; type=bam; md5sum=a525be222112674b21ada5ef31bc9882; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaAlnRep1; type=bai; md5sum=8a751defea218c2fb9d9c57ab7874044; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0276b810f07e79916c455ce2bb5ec157; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=32477d555cef1ede480634eba07e468a; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=e65eb9c05e42082bc0a19b1107320ad7; size=79M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2555; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=be4b8d2e892ad7b3539b5a1b70d8c6cb; size=80M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPamContigsV2; type=bedRnaElements; md5sum=f7ea8ee1acc4a584f6913fde18a2e6f9; size=6.2M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6938; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=983f2f1f1373b396b63d1241d6754ab2; size=1013K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4547; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4cb478b92f1cf46c2cf8031d98d5ace2; size=15M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3619; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=97000d9831c170051e012936dcde348a; size=165K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7442; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labProtocolId=036WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8daf2fe3dd0b14cb0cce3a0d3fc0a2b2; size=208K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4547; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=077d5ba155ea02a6996100b1293da32c; size=1.8M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3619; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPamJunctions; type=bedRnaElements; md5sum=72bd2e0441a098290bc37d108dbc0a6e; size=1.7M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=94696e0ae6c9f481b7f35342d645bb29; size=427K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4196; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=3d21c12d498f9fca5332c3bdf47aa8ad; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3619; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3175f40745ceb0fc558c226bdf0b38de; size=907K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7442; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labProtocolId=036WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2b4fc43ed33bd77b564e261dd93a7e60; size=265K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HMEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000176; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4547; geoSampleAccession=GSM765397; labExpId=LID8831; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPamTranscriptGencV7; type=gtf; md5sum=cc53721e067d06cd6069d7bd3a56136b; size=3.9M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1; type=bam; md5sum=8d555da2088148d30086f729624ebdd2; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapAlnRep1; type=bai; md5sum=dfef12696ff0ef95cc6ebf1de6242e29; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapContigsV2; type=bedRnaElements; md5sum=4bff741d303a8ccab4f65f93ed345b0e; size=11M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6945; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3b19fc58fc97cbc30393e74cb8a3f0d3; size=4.9M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4556; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0d8594de330c26be062a3af35f3e105b; size=17M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1a7ad07a3c28aeb113867cf603ba7aec; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=be588e912f3e37e5ef9189a585c66c61; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3620; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=11e01859abe6b4632b3cf241c7527790; size=620K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7449; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labProtocolId=036WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=a62338a0f331556835e6cf664d55f2b5; size=583K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4556; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c99b771a5d37ca44eae57168d6cafadb; size=1.9M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3620; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapJunctions; type=bedRnaElements; md5sum=2e61eb84be4e1a7c6f20f9d615cecf74; size=5.8M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapMinusRawSigRep1; type=bigWig; md5sum=68b04effdef1dcbf02471aaa3311e62a; size=374M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2458; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapPlusRawSigRep1; type=bigWig; md5sum=8d5af746966efac6f1f646d0d750dd1b; size=386M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=eb94362f1eb864be9182333b42f9a5cb; size=585K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4200; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6581c0645f5c4a7df2490e213ca3ead3; size=114M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3620; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=823561655be3f7fe84989003179023b6; size=8.3M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7449; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labProtocolId=036WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5e47119ae98669e80e71a468a8e6e3f9; size=924K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmecCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HMEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000153; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4556; geoSampleAccession=GSM758571; labExpId=LID8695; bioRep=036WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHmecCellPapTranscriptGencV7; type=gtf; md5sum=2711f0ee759331143a379ca7aa9cbdc3; size=4.4M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1; type=bam; md5sum=38105b73450548362bc46e3add0d025d; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalAlnRep1; type=bai; md5sum=5c7de6e2ad5f35d061ed412fec83b0b3; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6046; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalContigs; type=bedRnaElements; md5sum=12036c172e9e1b9dcf96424fbe616fe8; size=53M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7025; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=2a16db8db4fcba6bc56d54abfaac5cea; size=13M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6393; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=f81e68e86e9c0683b5c9f596c879df61; size=18M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=30671aa21b65d8e72059113fe135ef62; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=1594f8c658f5cc39b6547bdc670c2353; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7434; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=f1338de661f024fba95db6b33b1a3e78; size=3.4M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6393; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=850f11ba155cec3a57c0ef2c58d835f3; size=1.6M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6400; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalJunctions; type=bedRnaElements; md5sum=2834261159c6f41486497930faddf831; size=6.6M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalMinusRep1; type=bigWig; md5sum=4c4f9a50c339ddd7246584dfbb4ab5c3; size=260M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalPlusRep1; type=bigWig; md5sum=2c193a2af20cd63864f1f888478395a0; size=267M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6909; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=5645a295ec59c58e0862d5cbc3b00f00; size=256K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5889; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ccd4feb21196cafec969f4e041996072; size=229M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7434; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=0a02cbc8cc4ec1d9da6e14b364e6df9b; size=4.1M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmepcCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HMEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002683; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6393; geoSampleAccession=GSM984621; labExpId=LID47096; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmepcCellTotalTranscriptGencV10; type=gtf; md5sum=93edf5cb0585c0022c99c8c974976837; size=4.4M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2; type=bam; md5sum=92bd5939344efe6e40534844ff375945; size=30G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalAlnRep1V2; type=bai; md5sum=eda5e2fe1e0189462f29df51cfd1ab1e; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0082430.9; submittedDataVersion=V2 - First experiment found to be too shallow; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-07-04; dateUnrestricted=2013-04-04; subId=7320; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalContigsV2; type=bedRnaElements; md5sum=7a17817439ccacd799c51308f636891c; size=17M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalFastqRd1Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=89fe1c8711794b1e7d562cd820f91719; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalFastqRd2Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=8b5d32ff78052e035f7cac0e603baccf; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalJunctionsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0082430.9; submittedDataVersion=V2 - First experiment found to be too shallow; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-07-04; dateUnrestricted=2013-04-04; subId=7320; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalJunctionsV2; type=bedRnaElements; md5sum=7fee8aa6668f03047347c19fc07d8b7f; size=11M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalMinusSignalRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalMinusSignalRep1V2; type=bigWig; md5sum=71fff235f6e830176420f922546acf92; size=375M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalPlusSignalRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmncpbCellTotalPlusSignalRep1V2; type=bigWig; md5sum=92ee6be7d6233123985fb490c3370d65; size=384M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6865; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=cf2be06e53f4b8e1304a11f575c810de; size=262K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmncpbCellTotalSpikeinsRep1V2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMNC-PB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0082430.9; submittedDataVersion=V2 - The first sequencing had shallowness issues; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002878; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7189; geoSampleAccession=GSM984606; labExpId=LID47807; bioRep=077WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=62e66cb05ed420052df8d0e530faec6d; size=166M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1; type=bam; md5sum=8f386e4ec415bcc9f7dd56327654c089; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalAlnRep1; type=bai; md5sum=df3063d65a7c32488e90615bf7e015bd; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat010260412CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4c028f76eb9fa3a40e7ce60d4a546250; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat010260412CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=56d264aeec402bffed2e53914130c706; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat010260412CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalMinusRep1; type=bigWig; md5sum=74df75369b6400fd257e6fe9ae6fb3b5; size=215M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat010260412CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat010260412CellTotalPlusRep1; type=bigWig; md5sum=30147f6100a36ac3174f3e6ee2e2b30e; size=221M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat010260412CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5765; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=f4bd936a6877e295fb560bdc78ec1e99; size=143M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2; type=bam; md5sum=476cb8ad60bc3f9f7268b027579f1544; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalAlnRep2; type=bai; md5sum=2ca8e052a7c63f0172026d21b29b82ad; size=8.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat906160112CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=e6f9dd4f3d7f7f1cf1aeabc73a13f492; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat906160112CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=1969a52b13f58cb137a641e59e5e9f7d; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat906160112CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalMinusRep2; type=bigWig; md5sum=4a874239552bf5cdca87b92713904be9; size=371M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat906160112CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscat906160112CellTotalPlusRep2; type=bigWig; md5sum=2fc20cf6a3cea28452896064ec828fce; size=391M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscat906160112CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5769; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=6b58260a21a1c6220e0d0b24b3d8422d; size=288M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6025; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscatCellTotalContigs; type=bedRnaElements; md5sum=e78420e4ff9a389798b77437dae24a93; size=28M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6939; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=c65ef5d981e989c33c0c5a79f7927206; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6371; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=e74d46b346fc5be39be18a8990d57ab7; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7409; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=5a05f1e0e49fcf06bebe06a5c6402bb0; size=5.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6371; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=fa049fcc629d827930cea1725a5b231d; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6063; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscatCellTotalJunctions; type=bedRnaElements; md5sum=4c138a124acd9ef9c2711307185b936b; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0102604.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6874; geoSampleAccession=GSM981260; labExpId=LID47097; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=3de6d2be31d84f522b91767008fc6d00; size=244K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6879; geoSampleAccession=GSM981260; labExpId=LID47098; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=1cd35b82bf53fd0d524613321ea4cc85; size=250K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7409; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=36cf3ca5c1b1fc1675e503c5db8cdb1d; size=6.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscatCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=hMSC-AT; localization=cell; rnaExtract=total; readType=2x101D; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002669; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6371; geoSampleAccession=GSM981260; labExpId=LID47097,LID47098; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscatCellTotalTranscriptGencV10; type=gtf; md5sum=e8655b6c9476472fbaa411d4e550c7e2; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2; type=bam; md5sum=ad25d4ec87cccf26a64cac2afaffeee0; size=24G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalAlnRep2; type=bai; md5sum=9ed6c587c6e91d41256d112164732649; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=7c6be24a34ac1cb70ec0b2ab29bb4f41; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=a188b37fc5e4a7906ea52a8d7deb1437; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalMinusRep2; type=bigWig; md5sum=6aea942f81dbcd609ff91737bea585f5; size=310M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalPlusRep2; type=bigWig; md5sum=b008c0090fdb9677b549a42f28133e74; size=316M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005060211CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5878; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=e1f215ba3f3fe98eff1d492b771471e7; size=98M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1; type=bam; md5sum=983f7479d15a52f29a03c37f02ec0923; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalAlnRep1; type=bai; md5sum=ee42f8d35807ab4ab0f8c878b25e5a0e; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d8bb5e9322e35ec6200c50c6d6402b3e; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=930f80901b069f5bb2f83ae27df1f980; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalMinusRep1; type=bigWig; md5sum=f49676ff01812cd2af594afff8cff629; size=312M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalPlusRep1; type=bigWig; md5sum=d6e37a151d90caa86da8750f4be5b5c0; size=317M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbm005110511CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5786; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=b18c00b1c6ffbbe9abd7df9e4b09108e; size=151M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6020; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbmCellTotalContigs; type=bedRnaElements; md5sum=94059e0677273b9b8fd40e01c90f6ed0; size=34M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6932; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=cc76b09197488866a366eb214855efe5; size=21M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6366; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6580625de8c0ea2fe0cd41ea63937023; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7404; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=9bd82d89458691ee407571607e55f8ed; size=6.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6366; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=b6ecdd5aad06b1e9b7465b776f85568f; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6057; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbmCellTotalJunctions; type=bedRnaElements; md5sum=187a99b9bfe8d6d7f7d66d98f329f6b7; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6898; geoSampleAccession=GSM984608; labExpId=LID47099; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9cd161ac1a3cd9999a2028fc0474d914; size=249K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6902; geoSampleAccession=GSM984608; labExpId=LID47100; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=ec782c2cae001170a2569349b3d86f8e; size=241K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7404; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=52792a0fe20741af2e8851f6a2db09f6; size=7.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscbmCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=hMSC-BM; localization=cell; rnaExtract=total; readType=2x101D; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002673; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6366; geoSampleAccession=GSM984608; labExpId=LID47099,LID47100; bioRep=067WC,068WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscbmCellTotalTranscriptGencV10; type=gtf; md5sum=c16acd3251b0c83f1014e5ea899ac4c6; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1; type=bam; md5sum=4f2a8deff75bba30d4d8e20e188e4409; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalAlnRep1; type=bai; md5sum=5a044c15c036ad5d6887f040b6db6884; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fa479af2ea160f54679ed829259c4b61; size=9.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d0d1b5ba02bbae64e3d9be1ce1de538a; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalMinusRep1; type=bigWig; md5sum=54779270732dfab3c7b4fc3d90adb21b; size=257M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalPlusRep1; type=bigWig; md5sum=4c753645550c00c790bdd80a685893c2; size=266M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00525017CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5892; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=464719e4ae473495c27b4eed4886cec9; size=111M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2; type=bam; md5sum=83c2fe6e5b2c44f2391f685d9888a081; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalAlnRep2; type=bai; md5sum=ffdd48b36a0cdd6c3d3f48c294443a0c; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=403ce4d464f7de5e9bdec8658649a477; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dce09f91ce9a7318e833b00a47b90908; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalMinusRep2; type=bigWig; md5sum=ea5b2b86fb1e0d970f2e2d43a83767f1; size=234M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalPlusRep2; type=bigWig; md5sum=54c530b700e0f12f516cfebcbc48fb32; size=242M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscuc00811017CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5885; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0ad2724a5d0fa3316002e13e4ea16f2e; size=83M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6045; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscucCellTotalContigs; type=bedRnaElements; md5sum=55a0e183dbb8dadf9631e99e2729bf61; size=34M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7024; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=b95ec35906d1d9979742ee551645bdd4; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6392; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=2b6d0fa6eded1bb775880b3162633124; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7433; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=da4ce934c0e776b66cb92382b237ee29; size=3.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6392; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=b8ec81dbd005edc4093fe287d1e433e9; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6075; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscucCellTotalJunctions; type=bedRnaElements; md5sum=9c55ae4577c36f6644abaa9ad624cc94; size=10M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0052501.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7678; geoSampleAccession=GSM984607; labExpId=LID47299; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=7cd2f2076eb7b562822e74ca3fff0efc; size=263K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7682; geoSampleAccession=GSM984607; labExpId=LID47300; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=31176f8c56376ceecc42a7d5ba3496d6; size=261K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7433; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=872df8b29d2d9e5b898fad24d96dbf80; size=4.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHmscucCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=hMSC-UC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002684; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6392; geoSampleAccession=GSM984607; labExpId=LID47299,LID47300; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHmscucCellTotalTranscriptGencV10; type=gtf; md5sum=f3d1592ca3acfd2e8c2bd31d96d0e520; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2; type=bam; md5sum=369bc76090941726fd706473a306eba0; size=26G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalAlnRep2; type=bai; md5sum=388281aaec6d557dd08e8c9fe5382c55; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob00902021CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c55fd1fee92cd51d12574b358e7ac7f4; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob00902021CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0cf9638b8964917665bd5b6aace9937e; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob00902021CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalMinusRep2; type=bigWig; md5sum=280b2c95e67d836e5f1ab36db44e24d9; size=330M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob00902021CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob00902021CellTotalPlusRep2; type=bigWig; md5sum=e68bd87e10f3f97efffdacf1e4143cce; size=338M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob00902021CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5881; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=6ae2482f9a12855710ec67261dc3d199; size=274M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1; type=bam; md5sum=5d4eb12039a3777104091fd6d4ddac2e; size=27G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalAlnRep1; type=bai; md5sum=06be710d1e924ae051d53aad40347b25; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob0091301CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=98c25d8c5db8ff4e47b35df3e2eceda5; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob0091301CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=87f416893ff9dce0f6699520bb16aa59; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob0091301CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalMinusRep1; type=bigWig; md5sum=405aa0083f9ff0d3a4f688ddf46dfe5c; size=273M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob0091301CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHob0091301CellTotalPlusRep1; type=bigWig; md5sum=8505ea60ede18bc18b1f9b94f74bb609; size=278M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHob0091301CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=42b35c83d1107fd2681b0df0950399f0; size=265M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6038; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHobCellTotalContigs; type=bedRnaElements; md5sum=517c6702d07046dace81566a4ab483f8; size=33M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7013; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=5c2dee1f89fbc476634f5b0dd57e309f; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6383; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=45752a96e308636a69e8a4530b2ce176; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7422; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=7a824348ee02901a99215f655a8fe5ed; size=6.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6383; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=1a2fa64c16b59453a6456a4af3940c15; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6066; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHobCellTotalJunctions; type=bedRnaElements; md5sum=33a7a61ce33439af874046e4699a5726; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6869; geoSampleAccession=GSM984610; labExpId=LID47251; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=edc758b5cb107d059d41e425beaad6b6; size=297K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6880; geoSampleAccession=GSM984610; labExpId=LID47252; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=ba275078d7f7e6c4c55a09473a02f282; size=295K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7422; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=c8ab9d46ed78c48dba07929d3927dcdd; size=7.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHobCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HOB; localization=cell; rnaExtract=total; readType=2x101D; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002675; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6383; geoSampleAccession=GSM984610; labExpId=LID47251,LID47252; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHobCellTotalTranscriptGencV10; type=gtf; md5sum=f4748c0a35b6e19b327f41f6ad53ddb7; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1; type=bam; md5sum=831510aa645faf07832ae939ed9c91f5; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep1; type=bai; md5sum=529a816aeac52cdcfbbfdd16614e62b6; size=8.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2; type=bam; md5sum=e1a2b4299fca57118ed9495902e8b47c; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalAlnRep2; type=bai; md5sum=b4dead100a0fec96eada695e9fb15117; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0101504.13,0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6037; geoSampleAccession=GSM981255; labExpId=LID47301,LID47104; bioRep=071WC,072WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalContigs; type=bedRnaElements; md5sum=489165eeef8a0c81ce783de2fb41e44c; size=31M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=838bc4c5e6d039510842af4978ad3fca; dateUnrestricted=2013-03-02; size=18M; dccAccession=wgEncodeEH002667; replicate=1,2; view=ExonsDeNovo; labExpId=LID47301,LID47104; subId=6971; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM981255; donorId=0101504.13,0032601.13; bioRep=071WC,072WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalExonsGencV10.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-27; dataVersion=ENCODE Mar 2012 Freeze; md5sum=721f58435ddc6b0e1d18c651f2617898; dateUnrestricted=2012-12-27; size=20M; dccAccession=wgEncodeEH002667; replicate=1,2; view=ExonsGencV10; labExpId=LID47301,LID47104; subId=6387; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM981255; donorId=0101504.13,0032601.13; bioRep=071WC,072WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=203990161f548904cd97fcabd8ade62a; size=9.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=5f08786946ce1a50bcdf57af1b450c27; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=f33cefb683b8ad0bd5c998b237addedd; size=9.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dcceecfa6162095761b28ee05f043e5a; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-19; dataVersion=ENCODE Jul 2012 Freeze; md5sum=7966f92c6033e98fc42d5ab1d8811ab3; dateUnrestricted=2013-04-19; size=5.2M; dccAccession=wgEncodeEH002667; replicate=1,2; view=GeneDeNovo; labExpId=LID47301,LID47104; subId=7428; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM981255; donorId=0101504.13,0032601.13; bioRep=071WC,072WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalGeneGencV10.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-27; dataVersion=ENCODE Mar 2012 Freeze; md5sum=3f11705c1ab8c8ed658688864114d0f4; dateUnrestricted=2012-12-27; size=1.9M; dccAccession=wgEncodeEH002667; replicate=1,2; view=GeneGencV10; labExpId=LID47301,LID47104; subId=6387; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM981255; donorId=0101504.13,0032601.13; bioRep=071WC,072WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; donorId=0101504.13,0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6065; geoSampleAccession=GSM981255; labExpId=LID47301,LID47104; bioRep=071WC,072WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalJunctions; type=bedRnaElements; md5sum=f91a17a2c6d8fc33f597cd48bdb2c66e; size=10M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep1; type=bigWig; md5sum=e7d7573c251dc0d4b9cc1e789cee7318; size=228M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalMinusRep2; type=bigWig; md5sum=2b00ccaa53a7780b7514a749e6ab81bf; size=267M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep1; type=bigWig; md5sum=9e4f5a1743c027eee25e36b55670ed5c; size=236M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalPlusRep2; type=bigWig; md5sum=1a53de86ab79c8be02fcedf0916bc6c8; size=272M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7674; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=70c955c69fe2fef4248437f1e086237d; size=279K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6863; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=dbc3d6f44e488cbe8ad9a4705bd3b603; size=250K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5876; geoSampleAccession=GSM981255; labExpId=LID47301; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=aca96e8c0a8d947d53735f8cc74a00a1; size=117M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPC-PL; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002667; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5759; geoSampleAccession=GSM981255; labExpId=LID47104; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=6a0a1e73fba7aa1b541bdada9dc3d3f7; size=274M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-19; dataVersion=ENCODE Jul 2012 Freeze; md5sum=997c360db0bd8c28c771b32119b01737; dateUnrestricted=2013-04-19; size=5.8M; dccAccession=wgEncodeEH002667; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47301,LID47104; subId=7428; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM981255; donorId=0101504.13,0032601.13; bioRep=071WC,072WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpcplCellTotalTranscriptGencV10.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-27; dataVersion=ENCODE Mar 2012 Freeze; md5sum=152a0fcc5f422b9c56f01dd834d13354; dateUnrestricted=2012-12-27; size=5.0M; dccAccession=wgEncodeEH002667; replicate=1,2; view=TranscriptGencV10; labExpId=LID47301,LID47104; tableName=wgEncodeCshlLongRnaSeqHpcplCellTotalTranscriptGencV10; subId=6387; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM981255; donorId=0101504.13,0032601.13; bioRep=071WC,072WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1; type=bam; md5sum=278aff92ea2094f1db87a4c6201c6c96; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep1; type=bai; md5sum=975e324c7b03949876446396bc8497c0; size=8.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2; type=bam; md5sum=b5923ad2e51e9ae442f83cd56c14dce1; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalAlnRep2; type=bai; md5sum=47abfa6fda477b035fb00e85817ee94d; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6028; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalContigs; type=bedRnaElements; md5sum=fd4d66a8f9dd9be09300d1f03efa69d8; size=32M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6957; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=479ebfe1fe28fb2badc9c7cef0429dc0; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6374; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=1440b05129a7f94fb919807f22c8f003; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dac12c61fe9f6df6d67e6015fd728da1; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=bc67d07e7a1e9cd1aa704b3b8b0954f1; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fe2597dd97ad8f74e0a8af854ba004af; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0ddde35683c2af832245f9d447580832; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7416; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=e0dbfe0cf8b01a88496875c94de62599; size=7.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6374; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=cccf2c43bd2bc2560b88bf6918bf3b2a; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6073; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalJunctions; type=bedRnaElements; md5sum=664ca547223a8991cf5182a51758cf40; size=9.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep1; type=bigWig; md5sum=8754db45e64fe82ff307d667a06515aa; size=185M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalMinusRep2; type=bigWig; md5sum=e1e7416128256a066339226349eb1689; size=216M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep1; type=bigWig; md5sum=78eb4e27dcba6b851895abd398406b68; size=193M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalPlusRep2; type=bigWig; md5sum=baeecd78ae91f947d42949c6554e6fa2; size=224M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6899; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=8fc7155b250e4f7e8e7de8743af63ccf; size=249K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6906; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=6fe51d2c4d408756ffb4419b4b06b2ed; size=291K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-14; dateUnrestricted=2012-12-14; subId=5995; geoSampleAccession=GSM984604; labExpId=LID47105; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=a56fcc5f3a5b2b7b6ef6f6f95f30b119; size=282M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5884; geoSampleAccession=GSM984604; labExpId=LID47253; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=83cffd9b718f9a8f943a1de627fdc6f0; size=350M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7416; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=8718abef44f0234aacb74644fd431e8c; size=8.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHpiepcCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HPIEpC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002685; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6374; geoSampleAccession=GSM984604; labExpId=LID47105,LID47253; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHpiepcCellTotalTranscriptGencV10; type=gtf; md5sum=da9c68caf5ab918d613b437618b7d02b; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1; type=bam; md5sum=04ec3073ece9b688db457206c48ee8aa; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep1; type=bai; md5sum=7ec42ce9d869377cd23e5b4d25b6a9bb; size=8.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2; type=bam; md5sum=48df7f1c2f88c91ba2bb18b7e26d92cf; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalAlnRep2; type=bai; md5sum=37e04b2603e89a12f7e36070876bcb91; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalContigs.bedRnaElements.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-16; dataVersion=ENCODE Mar 2012 Freeze; md5sum=047c8dc3d8c68a2240ad7a0f1cfcf0a1; dateUnrestricted=2012-12-16; size=30M; dccAccession=wgEncodeEH002676; replicate=1,2; view=Contigs; labExpId=LID47260,LID47261; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalContigs; subId=6027; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984613; donorId=0022202.16,9100101.15; bioRep=093WC,094WC; lab=CSHL; type=bedRnaElements; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=bffdb6f31b43cd3c07e1dffa08df30ff; dateUnrestricted=2013-03-02; size=17M; dccAccession=wgEncodeEH002676; replicate=1,2; view=ExonsDeNovo; labExpId=LID47260,LID47261; subId=6994; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984613; donorId=0022202.16,9100101.15; bioRep=093WC,094WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6373; geoSampleAccession=GSM984613; labExpId=LID47260,LID47261; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=ff3c013765f89fd7d2a72d2ee1b505bd; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=17bfac4ad60a28da9ce251e06c7c8052; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=4836a08b4dabb3bc2dd81ccc1a286ee9; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d47016feae6245cd97cf8f4e11c9f14d; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fbb0f82aa862fdd04632899e9a9fdd19; size=8.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; md5sum=1ca52bebb3c6efbfa840813354efc3f3; dateUnrestricted=2013-04-16; size=4.3M; dccAccession=wgEncodeEH002676; replicate=1,2; view=GeneDeNovo; labExpId=LID47260,LID47261; subId=7411; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984613; donorId=0022202.16,9100101.15; bioRep=093WC,094WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6373; geoSampleAccession=GSM984613; labExpId=LID47260,LID47261; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6b0b5e01819c06d3ca1d845b1dbd5b6c; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalJunctions.bedRnaElements.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-16; dataVersion=ENCODE Mar 2012 Freeze; md5sum=4901d29e9caa141ede035013af403203; dateUnrestricted=2012-12-16; size=11M; dccAccession=wgEncodeEH002676; replicate=1,2; view=Junctions; labExpId=LID47260,LID47261; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalJunctions; subId=6069; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984613; donorId=0022202.16,9100101.15; bioRep=093WC,094WC; lab=CSHL; type=bedRnaElements; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep1; type=bigWig; md5sum=edbf11999e849996c3a5d7f6a3c166f4; size=277M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalMinusRep2; type=bigWig; md5sum=2dcd88e100d73a79969d6758053b6b75; size=200M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep1; type=bigWig; md5sum=a1d4729c43643a7dbc93b42c810ca633; size=279M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalPlusRep2; type=bigWig; md5sum=5702afcb563c42d4b43f35d05ecf2208; size=202M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6886; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=866058fc6346258a88e62b07d65f7fbd; size=269K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6866; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=6bfba9f76dd3f2217872bf06642d9754; size=264K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5888; geoSampleAccession=GSM984613; labExpId=LID47260; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=2cf43b7a746038bb948ba986dbc3085a; size=292M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5867; geoSampleAccession=GSM984613; labExpId=LID47261; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=dd1ef65f2cd1065a51562b4ba81769a2; size=143M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; md5sum=3caf55a9673520ada96f412699c226fe; dateUnrestricted=2013-04-16; size=4.8M; dccAccession=wgEncodeEH002676; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47260,LID47261; subId=7411; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984613; donorId=0022202.16,9100101.15; bioRep=093WC,094WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsavecCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HSaVEC; localization=cell; rnaExtract=total; readType=2x101D; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002676; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6373; geoSampleAccession=GSM984613; labExpId=LID47260,LID47261; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHsavecCellTotalTranscriptGencV10; type=gtf; md5sum=db5505005bf97d5d483a980be598180e; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1; type=bam; md5sum=f122a2f44c4afc1282e8c13692e73c04; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep1; type=bai; md5sum=72d4a45e642cb912fffee8ae67b66464; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2; type=bam; md5sum=e80b66c54edd1e499228678fa38a8fd3; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaAlnRep2; type=bai; md5sum=340205cd8cf59bd01ae34836857eb666; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9f5c105ba6b252efe8e4d65889be2d2a; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8554820be8269d470b46ad19511a7599; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6db1e0daf9f8bdc9bfcf063a94883cdb; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=de28bf6442e274604e62610dceeb7440; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=a06b15f8a5f4de8114bc4bd3d18e57e0; size=134M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=2f811554c78ffeac501a88b55ee02ad5; size=155M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2552; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=5b9f524892a55e44eeb2c853dabd7c42; size=138M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2556; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=3c1bc64972ca57495682acf98dcef61a; size=160M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPamContigs; type=bedRnaElements; md5sum=d6aed0607983086ad99eeeb1d75e5ef4; size=5.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6995; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b4287e0f607c074f4a84854486591dda; size=3.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4605; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b13a8f4225ca6ff38d5c3a01d4788574; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6eb0f0688264e4d721509b96ffad4114; size=549K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7451; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labProtocolId=023WC-,024WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6efeed7c1d2a6979d14678531ddd2325; size=827K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4605; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=53681df939f9893719fe2d8262707e87; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPamJunctions; type=bedRnaElements; md5sum=4daee15179a3eb88bb1a9bdac543c0c9; size=3.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8e9bedeea5f3a665d84bba7ef245cce0; size=433K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4c81021f42ea603432e9bf594c848a6a; size=432K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4198; geoSampleAccession=GSM765391; labExpId=LID8826; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=47cf5b43873d44d147878782eb3c83b1; size=960M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4249; geoSampleAccession=GSM765391; labExpId=LID8827; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2a2a133edd213323eaea02133fcb36a1; size=853M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3621; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=69b35ca646d56f9736cffa9a30a45105; size=3.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7451; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labProtocolId=023WC-,024WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=56710b3661516950c12070460c751e53; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HSMM; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000177; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4605; geoSampleAccession=GSM765391; labExpId=LID8826,LID8827; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPamTranscriptGencV7; type=gtf; md5sum=0e24828e5307dead5b07fe41254b3899; size=4.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1; type=bam; md5sum=8d64b01d54312d99b29675fca5d8ec84; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep1; type=bai; md5sum=55e6aa86b7d1017acf1cf6e9aa965346; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4051; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2; type=bam; md5sum=5ca5f66f8e40398e04dac616993e4c01; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4051; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapAlnRep2; type=bai; md5sum=022721bd91c729d852a3b24b90db2fe9; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapContigs; type=bedRnaElements; md5sum=e9bd75d1a165580480967ee89a27be95; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7009; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ab9ed9926359345ff7cf1799568ad439; size=6.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4587; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bac50d3d0823913000cdf4ea03a2e538; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a8a9d0c320c925be22bd689671d0052f; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=26b3ff540b702363f476290f9cf6a68f; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=908afd5c94a524b2165bcb1b064592ea; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6837ea08a9953b611bf86558b203d335; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=88d988438d81e7abe78ad84aa58b37d6; size=957K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7480; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labProtocolId=023WC+,024WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=cc54c2cbba4b607b873849d857226f09; size=843K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4587; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=350aed9163622945dcc2f831df29637f; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapJunctions; type=bedRnaElements; md5sum=6507d598201091f453efa7fccdb7f408; size=8.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep1; type=bigWig; md5sum=a28fe167cc029ca8f6126a9aba3144d9; size=331M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapMinusRawSigRep2; type=bigWig; md5sum=e3889b4a196f36bf230b16ffa8a177ab; size=497M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2459; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep1; type=bigWig; md5sum=1a8b3edccda962b37f115d6042db9a29; size=342M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2460; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapPlusRawSigRep2; type=bigWig; md5sum=1af1b7f8f95d7e2a6e92ec0de11dcae1; size=514M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=c6abf847160aa903ba5b2bb58bd5eb51; size=581K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8076165b83059dd60c961cafc704e9b6; size=576K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4261; geoSampleAccession=GSM758578; labExpId=LID8710; bioRep=023WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6055166459ed81545ee33d39506b4fcb; size=130M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4246; geoSampleAccession=GSM758578; labExpId=LID8711; bioRep=024WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=fb958d17c4f0087631da80a6ddbe3396; size=179M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3622; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d86627551b4a0936ee46e75edf7793ec; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7480; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labProtocolId=023WC+,024WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=84ac3f86d8fd876cd0c0ee5a63ec1e42; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HSMM; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000154; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4587; geoSampleAccession=GSM758578; labExpId=LID8710,LID8711; bioRep=023WC,024WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHsmmCellPapTranscriptGencV7; type=gtf; md5sum=47caebb06dd080ffb941bb2461e8dde3; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1; type=bam; md5sum=17ef75ddc34bf73f1ac66e5c7eee7acb; size=9.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep1; type=bai; md5sum=3566d936255f186321352927dd6d2c97; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2; type=bam; md5sum=e5d6ef1eaa682847c97f9d20c8b92c8c; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaAlnRep2; type=bai; md5sum=c36f0f4506e2417e42934238ba3ae307; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bc95db8ef05b610e2f34964ed4216318; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f09e29d5478edec9324f694476fe6036; size=5.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=170a7435d417e0dd197a86452c3078aa; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=594c90e69113f6c486f9efab32e32188; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=8b5f82a7675be92488259b7403561279; size=192M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=a7a35220a9becc1ba9142ba9e6e12135; size=153M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3134; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=e427102b798b568407c58059dc5a1e4d; size=196M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3135; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=69848abec6e79c103c67a775fea23bde; size=155M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPamContigs; type=bedRnaElements; md5sum=1b80e5b935908b2199f750e99b249b7a; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6955; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0f850d5d50b33265058752fc3b92d017; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4565; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ac0920133ecd061e7a8bfff165ed97a1; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=570e9f72615b4c9c10d1ebbef5fb98d1; size=4.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7456; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labProtocolId=009WC-,010WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=56fc1c5a032f7f395fd3c319078d05cc; size=5.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4565; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2574da64afc7e07d304a7aacc64a1f77; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPamJunctions; type=bedRnaElements; md5sum=9d0e7a5414a0070367a660af98164c28; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=124eca194f4398d009f65016d4552b4f; size=443K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f32195fdfd7f970367f88b7d73daa4c7; size=442K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4255; geoSampleAccession=GSM767856; labExpId=LID8788; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=886c58793cc44619bf9128784270044a; size=110M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4269; geoSampleAccession=GSM767856; labExpId=LID8789; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b651fc4606d22b88ec815c345300e2de; size=80M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3627; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=846a95831083de9fe31b5d16e6b188ff; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7456; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labProtocolId=009WC-,010WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c865c2a438d15fe3e05cc361d2bd55d3; size=6.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000188; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4565; geoSampleAccession=GSM767856; labExpId=LID8788,LID8789; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPamTranscriptGencV7; type=gtf; md5sum=7852ef9fb92f41e79dfe2a4aa7a59ef1; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1; type=bam; md5sum=fbcd4ec3baa483a3517b6c60adeaf5b7; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep1; type=bai; md5sum=41bdab8d8dc2d535fcb17b63ea6252a6; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2; type=bam; md5sum=f7d81fc8b284e78252739950d0fc82de; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapAlnRep2; type=bai; md5sum=55f6c3400c4c25a4bfe4b6deb489eefb; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapContigs; type=bedRnaElements; md5sum=8cb2bf627679c4a15e9b72707b2fa413; size=16M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6996; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=d7428fa4e57ca6e882e33909685fac3d; size=6.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4564; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4bec3c916509595f7a3b025c9772e495; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4b00b8debf1a9df6f44fb6d174625ee6; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d5fc5292497603975fc342ac7ec7b0a3; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8c3d3a819cdff619170309a1fcc2ce09; size=5.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9229bda161ee6cd38f185eff15e79165; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6f50ea019c78010150ba1ceefac9b74e; size=1.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7459; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labProtocolId=009WC+,010WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=309e6350ff5cdf3d15c03fa041337bca; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4564; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=825aec3fd9fc65c1dbda7f72d7c72eaf; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapJunctions; type=bedRnaElements; md5sum=1f5bc55dfca568db07839d3924af7d0e; size=8.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep1; type=bigWig; md5sum=1dc80cd15e3e0fc1fece94d66ed9362b; size=524M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapMinusRawSigRep2; type=bigWig; md5sum=c5dc54a3c6773fb83de0b60c43bd74ed; size=561M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1930; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep1; type=bigWig; md5sum=e94d2e4799df71c7d8cb5555e5073e99; size=540M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1914; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapPlusRawSigRep2; type=bigWig; md5sum=6454ddaa5cf42f913f8d88e6ac7c26d6; size=578M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=7bf689dab6c2bfa9fc058bf57f1dadce; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=006126d0d65e6e3272a76d93eb2d3cf7; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4286; geoSampleAccession=GSM758563; labExpId=LID8463; bioRep=009WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c560f68c63e964215844c8be85dc660c; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4204; geoSampleAccession=GSM758563; labExpId=LID8464; bioRep=010WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4475a8ce3ec32d5408052e2fbd8384dd; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3628; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ef0e39cd08817f9e5f95466d1588d64a; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7459; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labProtocolId=009WC+,010WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3e67512720a188be1d3facc916744d7b; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000155; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4564; geoSampleAccession=GSM758563; labExpId=LID8463,LID8464; bioRep=009WC,010WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCellPapTranscriptGencV7; type=gtf; md5sum=2f22005d5e2919203c63274c22e2b0f4; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3; type=bam; md5sum=f50e368c0dd3ae3a4d6551ab0e8c19a7; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaAlnRep3; type=bai; md5sum=5756462bd7c1afc211e3d7ef385948ae; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5305e74f8f7e5b557481e943c1159086; size=4.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2c327276d4f379ec2a945753af436151; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=7eae85ef1b359f1178d5b90ff609da76; size=35M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3225; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=bc189ef51cf1faafc1aab367ce3845bf; size=36M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPamContigsV2; type=bedRnaElements; md5sum=fadc4d042c34e7dfbcf0d95cf75416b5; size=8.7M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6943; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=06da9b0d0c89c67b5c3d9e11f3667cc3; size=3.5M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4552; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b3deb5d743efc30a33a2a22f72964b13; size=16M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3623; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=06b1c6b4f732ea06d07af286639fa596; size=459K; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7446; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labProtocolId=029C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=63826151c75217673db485e7a410c9bc; size=553K; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4552; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4ec4383a4ca9935d36c139dc6e45782c; size=1.8M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3623; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPamJunctions; type=bedRnaElements; md5sum=ba461428aab413747ac2ac99f82a377d; size=1.9M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e470757cfa33e390c0b0a78880d1f2e3; size=500K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4199; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=0cb72bb1492f3a0056d4aa194e90987d; size=111M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3623; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a6cbd3efa6a43cc7d14e3eeec284b234; size=3.9M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7446; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labProtocolId=029C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b5f4ed4140ddf4c51f0d477192301125; size=853K; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000200; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4552; geoSampleAccession=GSM767839; labExpId=LID18556; bioRep=029C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPamTranscriptGencV7; type=gtf; md5sum=b469974551fc8d322fe31d0ec0cf3efc; size=4.0M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3; type=bam; md5sum=1d4d5e028c4e7d8bcacc4427b21f0769; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep3; type=bai; md5sum=aa9303053f865231c2ffc678259eade2; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4; type=bam; md5sum=86a9a991dc1cccbf1b24b217e3851325; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapAlnRep4; type=bai; md5sum=3d9dc61a6f4a2484ee7a92675af03ca3; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapContigs; type=bedRnaElements; md5sum=d0c878c595f411969bf69229d40933c2; size=8.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7021; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1fd91fdef366f85e38f3f43ce71bda03; size=5.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4595; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d762442a08388ffa1196b94a1ad478f7; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=55282b27ced58804f0d7504afd6d828c; size=7.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1864bde2bc026669c13c1a63a9f58dba; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ddc96a356431f20287f162b86661440c; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=420f04220198807a93ce2644b4eb24ac; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=efafaa29c8085a761263f2d23d8e490a; size=843K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7488; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labProtocolId=029C+,030C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fe27dc858ae1cdce72aefc047e44d336; size=798K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4595; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1c4363a0ac7b4c5356c752a460d951d3; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapJunctions; type=bedRnaElements; md5sum=1ab41d1edcc0cbfecaeb2532e25253d6; size=11M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep3; type=bigWig; md5sum=d077c207ae9daae94d878b12410a5c0a; size=334M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapMinusRawSigRep4; type=bigWig; md5sum=09e17a6989b7e70350deb2bfd1ffe3e7; size=293M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2461; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep3; type=bigWig; md5sum=e132ff2d68daf8eafe4b59031ad0692d; size=341M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2462; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapPlusRawSigRep4; type=bigWig; md5sum=568b49ea017299b22f19180426c5af87; size=300M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f9330ea1e0d8dc05fa849e9859e95299; size=611K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0d565109247a5ec596d72b339190cb3b; size=616K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4257; geoSampleAccession=GSM758569; labExpId=LID8688; bioRep=029C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c3fff573667b8eb27bdbd74d37bbbb8d; size=179M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4187; geoSampleAccession=GSM758569; labExpId=LID8689; bioRep=030C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2b4c377fb853d072eda8267d38894acb; size=135M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3624; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=af1d24826595a5bd768726e9bf5fa6be; size=12M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7488; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labProtocolId=029C+,030C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=166b3e0f8a99156233e39940f4b1fde8; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000156; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4595; geoSampleAccession=GSM758569; labExpId=LID8688,LID8689; bioRep=029C,030C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecCytosolPapTranscriptGencV7; type=gtf; md5sum=ff97afec797cdd0aea9ea3b5d294b1d5; size=5.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3; type=bam; md5sum=b7d48d6d603ad6e0403229b939de2dc8; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep3; type=bai; md5sum=d5f86ca486efabe56c7cbf4a5aa7e392; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4; type=bam; md5sum=d03216d944a8de4d64310c59eabbae37; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaAlnRep4; type=bai; md5sum=02899aa993840a6bbb6f85884a125623; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c97f6004abd957a9f4edd6b4676039e1; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=095cb62b96c89d4f41b9b5364575c2e5; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=88c3dff6260b3f3bc6ac202faa59f457; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4f8c7a6c63a17d35f4e1b88a248c2253; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=e8ebdc66d5e53b53c41a5abc50899a18; size=341M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaMinusRawSigRep4; type=bigWig; md5sum=65e87aea117e9694091b3dcec5f07ddd; size=422M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3136; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=4cf94b4617e5f65a46106d1b7e47300f; size=346M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2010-12-23; dateUnrestricted=2011-09-23; subId=3137; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusLongnonpolyaPlusRawSigRep4; type=bigWig; md5sum=d84a49618f416edfaee0915317ff5122; size=428M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPamContigs; type=bedRnaElements; md5sum=0c155e04fe5e78b8d1b4ca1d4a44b2a4; size=14M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6997; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=73b34e72efdcb3b01ef6856d1bf6454f; size=13M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4563; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=dcaa1c68d7b94b262c1f7a994cfb8b2d; size=18M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=dcb6af87b04337dfa3fcbe21ae0f90a4; size=6.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7458; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labProtocolId=029N-,030N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=af728fc6b420603bf6d1600ea29ab860; size=8.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4563; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=94f68c58de055eb4883ab87cd7b89ebb; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPamJunctions; type=bedRnaElements; md5sum=b697fda3050e17adf692818189edf69f; size=7.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=131c7613b9e65a911829b66dde812092; size=440K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=77ef1cbe26b347c4a87f769b6a7152d7; size=436K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4284; geoSampleAccession=GSM767857; labExpId=LID9206; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=73b5c583d528a36177646f2197464abe; size=106M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4206; geoSampleAccession=GSM767857; labExpId=LID9207; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=447cf1d57246867cdd42c377db881ec8; size=122M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3625; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d4d3498323ad8c8a27a35f81cb80de68; size=32M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7458; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labProtocolId=029N-,030N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=78716470021e272c43f6bdb0cc043c5c; size=9.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000189; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4563; geoSampleAccession=GSM767857; labExpId=LID9206,LID9207; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPamTranscriptGencV7; type=gtf; md5sum=1a287346344360e88c718f7d0418b329; size=4.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3; type=bam; md5sum=488cfcb5a9aea8c1d2128327db09fa0a; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep3; type=bai; md5sum=0fea8329e45b0affe7aa345281083d56; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4; type=bam; md5sum=63cdb6362d78c36b60401d803af249d8; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapAlnRep4; type=bai; md5sum=e59b1f7ad594be1aae9e32740763cae9; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapContigs; type=bedRnaElements; md5sum=6581623e97c6bbc0f006e71120a25c07; size=16M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6982; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bb143ed171896f4d9482682311ddd869; size=8.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4602; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=83fb55788caab2446bc23ec61c8e3dda; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7ed2ed46ff604947962b20e0f1eb4d7f; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9248b623fc8413362bff5189930a9747; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b1d5a7e43bed034136263ca9e8af8fa3; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bd6dfa99f526a85f1af11e1e7b9f61ca; size=7.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=24043528e409032124cf93d10c10b23a; size=3.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7495; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labProtocolId=029N+,030N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bd7f35c262b86ae7723ef8c09e98ce85; size=3.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4602; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=f84836d075ec0e3e7928c5cc5eef19df; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapJunctions; type=bedRnaElements; md5sum=25f06a13a711d79db8eded5a00d6ebe5; size=12M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep3; type=bigWig; md5sum=9bb7e14c2274f8f28993cd24349047f2; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapMinusRawSigRep4; type=bigWig; md5sum=2f82698d1775e449740c9ae9ae15181e; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1931; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep3; type=bigWig; md5sum=5f694c289513eb00eb3d3999a11b0bee; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2408; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapPlusRawSigRep4; type=bigWig; md5sum=e77027eb545df7448794430f43bd9cbb; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0d0e34011c5c529d797f70b9be089fd8; size=622K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=2774866fa52662dbba39263d7240a031; size=624K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4293; geoSampleAccession=GSM758565; labExpId=LID8690; bioRep=029N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=55ba0bffd40a5f0c8ac9c2c365fe8c97; size=146M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4210; geoSampleAccession=GSM758565; labExpId=LID8691; bioRep=030N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=67477602838d3fdcddef6a0226ad0773; size=162M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3626; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fe7dd11e4cbae9687fe487bee0a229fd; size=25M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=7F3771; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7495; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labProtocolId=029N+,030N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ab4a67f0f16a9689aec56e35d55a96f2; size=3.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000157; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4602; geoSampleAccession=GSM758565; labExpId=LID8690,LID8691; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqHuvecNucleusPapTranscriptGencV7; type=gtf; md5sum=77d15f80bf2e74cd547562b857747ba1; size=5.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1; type=bam; md5sum=f3792d45f5ad602f338c7d06514acd01; size=27G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalAlnRep1; type=bai; md5sum=6fb64cd41b487645e7c6833ae765aef4; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf60912033CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=69a28f1a1e7de04910f9ca726b74b973; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf60912033CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c8fd867bdcd582e26de34e9609e11e39; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf60912033CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalMinusRep1; type=bigWig; md5sum=3e2041453c0d38e51c4f857fd97a3a53; size=250M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf60912033CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf60912033CellTotalPlusRep1; type=bigWig; md5sum=2527edba3d1c39b3f047fe57336de4c2; size=261M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf60912033CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-24; subId=5872; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=2b4589f48459b15327e7cdba217ec878; size=242M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2; type=bam; md5sum=a9ea2945de2240919312372788fb51d3; size=27G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalAlnRep2; type=bai; md5sum=e22df7fb88e7b8a0b75c266049c9facd; size=9.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf61004013CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=3f2007b8e32e6a09a7e928d27bed3681; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf61004013CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=25b624f5cb3ce6d110c197f59f4ff22d; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf61004013CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalMinusRep2; type=bigWig; md5sum=9a973fa4c7c04c86a8502f0ac71d10b8; size=305M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf61004013CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmf61004013CellTotalPlusRep2; type=bigWig; md5sum=723a1ff758643b94b77012f135f3f919; size=317M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmf61004013CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0418e019b875c73444b9dd23b5732e0c; size=226M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6023; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmfCellTotalContigs; type=bedRnaElements; md5sum=e6d126bf198473ab5655b8f6305e75ea; size=35M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6990; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=2c34da5467204c2a820ae298e2c83dca; size=22M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6369; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=6db7bfac7e87e539b20f8edea5e5d7ad; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7407; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=e26415474ea78606061aa83e4af4d812; size=8.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6369; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=0f28fea44d27e0b029131ba5c32ee92d; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6061; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmfCellTotalJunctions; type=bedRnaElements; md5sum=7a842320f87147a60b39f1a7bd889a28; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6091203.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6893; geoSampleAccession=GSM984619; labExpId=LID47249; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=4605be57d0e022ce3392af5c4bc5d959; size=299K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6873; geoSampleAccession=GSM984619; labExpId=LID47250; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=1c5bd7bffd386531b70275488471ef46; size=292K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7407; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=8b84f4de17fea730660a37ef955ded08; size=8.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHvmfCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HVMF; localization=cell; rnaExtract=total; readType=2x101D; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002681; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6369; geoSampleAccession=GSM984619; labExpId=LID47249,LID47250; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHvmfCellTotalTranscriptGencV10; type=gtf; md5sum=a33a5df94b83618dc52fbff4b903d66a; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2; type=bam; md5sum=eae75cd92dce55a50271ae098acd1a34; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalAlnRep2; type=bai; md5sum=c709a63e0706034a49cae1880c98110a; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp0092205CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=032e6d3b4a480bddd205b261841a05d5; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp0092205CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=dcea0f6b6e368339b14d8dd0491e79bf; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp0092205CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalMinusRep2; type=bigWig; md5sum=bea04004b3cfdd3c13bc4eb98f7893f4; size=193M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp0092205CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp0092205CellTotalPlusRep2; type=bigWig; md5sum=9c56404fa16845cd13f99d59cbbf69ab; size=199M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp0092205CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-25; dateUnrestricted=2012-11-25; subId=5875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0f82f6fb501c1b2c20f0a5f861952958; size=268M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1; type=bam; md5sum=7361c7b7ee72ca26e18798084c035977; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalAlnRep1; type=bai; md5sum=f9628ff1a5f9a5e3fafb4b9615bcd1f5; size=8.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp81202015CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=e06ce99bef092e0ba274cd910c6a1227; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp81202015CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=bfbfd961c4f775e695ba6c99513a4899; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp81202015CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalMinusRep1; type=bigWig; md5sum=baf55eb39fa4dc9e41a433526e6e96e7; size=295M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp81202015CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwp81202015CellTotalPlusRep1; type=bigWig; md5sum=ee7d60d63c957cacdfdb7931cc680127; size=303M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwp81202015CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-25; subId=5886; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=f91756ebb80d1022b4a22c1bfce30581; size=335M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6033; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwpCellTotalContigs; type=bedRnaElements; md5sum=6c8a385bf7b6706bc6e4f1b09ae21c9c; size=29M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=f9673950b1263833550ff4ab6b5e7efc; dateUnrestricted=2013-03-02; size=18M; dccAccession=wgEncodeEH002682; replicate=1,2; view=ExonsDeNovo; labExpId=LID47254,LID47255; subId=6951; cell=HWP; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984620; donorId=8120201.5,0092205; bioRep=079WC,080WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6378; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=d700375601eff310e850ef1ae9b15e72; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; md5sum=bc1b770b205475c65833b4305b78054d; dateUnrestricted=2013-04-16; size=5.7M; dccAccession=wgEncodeEH002682; replicate=1,2; view=GeneDeNovo; labExpId=LID47254,LID47255; subId=7413; cell=HWP; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984620; donorId=8120201.5,0092205; bioRep=079WC,080WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6378; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=02ee3ec132a6d0b64db4f84b7a3e6511; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6052; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwpCellTotalJunctions; type=bedRnaElements; md5sum=e5af33d92f94386dfae72b7940da28f0; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=8120201.5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6883; geoSampleAccession=GSM984620; labExpId=LID47254; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9cf446761ea46d05966d908f3a47cddd; size=302K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0092205; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6875; geoSampleAccession=GSM984620; labExpId=LID47255; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=77b6663fa8ec0998ff0288968e1de9fb; size=221K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; md5sum=d3833f1870785fecb525f6f5593e10d9; dateUnrestricted=2013-04-16; size=6.3M; dccAccession=wgEncodeEH002682; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47254,LID47255; subId=7413; cell=HWP; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984620; donorId=8120201.5,0092205; bioRep=079WC,080WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqHwpCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=HWP; localization=cell; rnaExtract=total; readType=2x101D; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002682; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6378; geoSampleAccession=GSM984620; labExpId=LID47254,LID47255; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqHwpCellTotalTranscriptGencV10; type=gtf; md5sum=3d453bda79312a9b0e8302c783bb76c7; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1; type=bam; md5sum=114d55b835b1da684d17b1c01a866187; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep1; type=bai; md5sum=32a744724a9553171f68f08a907ec862; size=8.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2; type=bam; md5sum=732db7a9ffe6ef3bda55c1ce3d5d3a0e; size=8.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapAlnRep2; type=bai; md5sum=488f276e1053238367fed3966112ba43; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6044; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapContigs; type=bedRnaElements; md5sum=607c35255d73bc309212eecd0efbe6b3; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=7221bbad86eab126c41a20d29cca6a2d; dateUnrestricted=2013-03-02; size=31M; dccAccession=wgEncodeEH002629; replicate=1,2; view=ExonsDeNovo; labExpId=LID45016,LID45017; subId=6979; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981249; donorId=58607680; bioRep=045WC,046WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6391; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=d39770eaef5c3b9cf65adf273e4ced59; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=c7212d301510b055e2e7876b265df337; size=9.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=6c98b575f3caedb88f054e4444afded6; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=1a53853d97ed1bf5fd1eb8d036f67f2d; size=9.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=f9875eff772cdafa2292132c659fbffc; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=045WC+,046WC+; md5sum=bd314e4677983ecdb1ab785da2023811; dateUnrestricted=2013-04-16; size=1.1M; dccAccession=wgEncodeEH002629; replicate=1,2; view=GeneDeNovo; labExpId=LID45016,LID45017; subId=7431; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981249; donorId=58607680; bioRep=045WC,046WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6391; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=40da3fcb1ecd856f83e6442462f83d66; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6074; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapJunctions; type=bedRnaElements; md5sum=4b2b82cf77267849752a2d1443e4a5d0; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapMinusRep1; type=bigWig; md5sum=87f1004ddf6986676973140ca337965d; size=148M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapMinusRep2; type=bigWig; md5sum=8bc83d18da04185ab2c2e5a0f5a98043; size=107M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapPlusRep1; type=bigWig; md5sum=7c6653928e09c95dceabeba050483cfd; size=152M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapPlusRep2; type=bigWig; md5sum=d5717c12ff57b3260c348c2355b81df8; size=110M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7666; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; labProtocolId=045WC+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=4d6007689937335d781410e3a15ce42b; size=431K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7679; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; labProtocolId=046WC+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=1218df668d3dcbcdfd5e26b41e825168; size=431K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5781; geoSampleAccession=GSM981249; labExpId=LID45016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=7c6f167e4bd110681d6f6b80e01ec9c5; size=326M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5771; geoSampleAccession=GSM981249; labExpId=LID45017; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=f7784c4a13a4bf9a18f2db9f63b71d2d; size=172M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=045WC+,046WC+; md5sum=65de47738dacd4c352729511b278a316; dateUnrestricted=2013-04-16; size=1.6M; dccAccession=wgEncodeEH002629; replicate=1,2; view=TranscriptDeNovo; labExpId=LID45016,LID45017; subId=7431; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981249; donorId=58607680; bioRep=045WC,046WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002629; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6391; geoSampleAccession=GSM981249; labExpId=LID45016,LID45017; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellPapTranscriptGencV10; type=gtf; md5sum=b0d8ccfbef53da5eb46be55c5ab207b4; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1; type=bam; md5sum=5f3b458260d9917ee07f287f561fbacf; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep1; type=bai; md5sum=904db66b92aaeaecb709e8fb626cf719; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2; type=bam; md5sum=c14f95ccd2c7e421725247d9c3bf9768; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalAlnRep2; type=bai; md5sum=04ff8327f2fed5ab3eb193e5b55eb1d9; size=8.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6021; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalContigs; type=bedRnaElements; md5sum=2e5fcd92c68937369d89d0b3e51cd7bb; size=32M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6935; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=3278ff6e4ab786fa726d1e77039931bf; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6367; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=96126de2bac01eaa1839c77de2103bad; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=47fc17ab6a3ac42d99ce6d3c264085c9; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3a9c12fc030d937999fa2456cdfd0c69; size=9.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=194ec458645a9e85264143d9d37de5db; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=339ce5757850165094e64cd90c7912b1; size=9.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7405; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labProtocolId=045WCt,046WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=af0e3f708da0e50a92808f9515b9b75f; size=2.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6367; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=e770b99765d03dd6ed462835984ccf09; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6058; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalJunctions; type=bedRnaElements; md5sum=9cce1fe5fa6cfb63fd205c59861f9904; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep1; type=bigWig; md5sum=d981e3b2d2672f4393ab38b2416ef2f5; size=234M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalMinusRep2; type=bigWig; md5sum=006cceade236d974245d50329883886b; size=241M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep1; type=bigWig; md5sum=49c670192adab0eb6890fe1f3d98f3f8; size=239M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalPlusRep2; type=bigWig; md5sum=fd6b26711ef4a27ce5e065e10a447f47; size=246M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7675; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; labProtocolId=045WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=47a47c59336bc42634a84382b95937a3; size=342K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7669; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; labProtocolId=046WCt; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=b653966efd80b68a4d49fb8aa5a3e1c1; size=341K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-16; subId=5768; geoSampleAccession=GSM981243; labExpId=LID45238; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=db7410849e8d797003204d43bfb85f3e; size=137M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-02-17; dateUnrestricted=2012-11-17; subId=5783; geoSampleAccession=GSM981243; labExpId=LID45239; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=288f3c6d7e40224565b01c9eae1b784e; size=116M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7405; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labProtocolId=045WCt,046WCt; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=f23de19bda9edd1020b8a2a31a371ef4; size=3.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=cell; rnaExtract=total; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002623; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6367; geoSampleAccession=GSM981243; labExpId=LID45238,LID45239; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CellTotalTranscriptGencV10; type=gtf; md5sum=93c1fcb55ad549e6fa509db1687cd577; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1; type=bam; md5sum=f15f6a6f113be1daf1cdd3ced8147147; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep1; type=bai; md5sum=a27bfc74fa0d2a57383ee356ec5c3888; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2; type=bam; md5sum=0f7febc2c41ed69593728e64ce0d1a1b; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapAlnRep2; type=bai; md5sum=2972057bb00a575c3417353052dd3679; size=7.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6043; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapContigs; type=bedRnaElements; md5sum=ac993a0271408cee8cf6a7f467811ab6; size=8.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=6b50704b05f9b91473c8160d299a20b9; dateUnrestricted=2013-03-02; size=14M; dccAccession=wgEncodeEH002626; replicate=1,2; view=ExonsDeNovo; labExpId=LID45611,LID45612; subId=6953; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981244; donorId=58607680; bioRep=045C,046C; lab=CSHL; type=gff; localization=cytosol; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6390; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=22f55a90de05097d70d0e0e3521cc83c; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=c4f66de3ca4f8b4efcbfb1bf7c3316f4; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=ccdb8e60a3fc36abd01d94f66dbc6602; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=4dd1bfeab03778dcacefaa7ea6927a24; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=54ebc58eabcbca63681ab7b39b9f3b85; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=045N+,046N+; md5sum=373fca0175696e9e9c6dec55095693c3; dateUnrestricted=2013-04-16; size=992K; dccAccession=wgEncodeEH002626; replicate=1,2; view=GeneDeNovo; labExpId=LID45611,LID45612; subId=7414; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981244; donorId=58607680; bioRep=045C,046C; lab=CSHL; type=gff; localization=cytosol; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6390; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=161b8abc319343e0737448aef9a3f90c; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6072; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapJunctions; type=bedRnaElements; md5sum=4142f66b77901f2adb556e687e2240a3; size=9.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep1; type=bigWig; md5sum=1f1b7be359feb2b20da4b15f5a9b12df; size=55M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapMinusRep2; type=bigWig; md5sum=85da51a3c14bdb7e9afd957a4212e219; size=89M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep1; type=bigWig; md5sum=8b9fc36164124932c3e0a4f266f18e01; size=56M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapPlusRep2; type=bigWig; md5sum=edb5d300a91a0e8724f4eafb92ecce4e; size=92M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7664; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; labProtocolId=045N+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=8709a657b42a40b73b7f90ef091102e1; size=310K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7668; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; labProtocolId=046N+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=5344f293544ec7d12a50edbee2fce3e2; size=340K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5779; geoSampleAccession=GSM981244; labExpId=LID45611; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=a707f1e241a101ff15a3520ed55ced83; size=391M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5762; geoSampleAccession=GSM981244; labExpId=LID45612; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=61d9f4115784f1569306eb4c1295f7d3; size=274M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=045N+,046N+; md5sum=ee5efe02b4d5032f810233d76e9db5cc; dateUnrestricted=2013-04-16; size=1.4M; dccAccession=wgEncodeEH002626; replicate=1,2; view=TranscriptDeNovo; labExpId=LID45611,LID45612; subId=7414; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981244; donorId=58607680; bioRep=045C,046C; lab=CSHL; type=gtf; localization=cytosol; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90CytosolPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002626; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6390; geoSampleAccession=GSM981244; labExpId=LID45611,LID45612; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90CytosolPapTranscriptGencV10; type=gtf; md5sum=3c54273c6f195ef11da74ff39d07d5b7; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1; type=bam; md5sum=16c147703681e7a58ecf08c9ef70793c; size=22G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep1; type=bai; md5sum=539428010642f55143e50a05c7470ed5; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2; type=bam; md5sum=d4dcc7a67bda49ee4be0dbc4a22dc6ac; size=23G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapAlnRep2; type=bai; md5sum=c34b154a2a80a77e714023ee963d144f; size=9.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapContigs.bedRnaElements.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-16; dataVersion=ENCODE Mar 2012 Freeze; md5sum=363b333b9bf211b11ebcb7970c607531; dateUnrestricted=2012-05-14; size=25M; dccAccession=wgEncodeEH002628; replicate=1,2; view=Contigs; labExpId=LID45613,LID45635; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapContigs; subId=6034; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981248; donorId=58607680; bioRep=045N,046N; lab=CSHL; type=bedRnaElements; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6969; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=25e4544336e38057df51b2e15914cba2; size=21M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6384; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=f4305e85bb7bc1004140c3199cf5a135; size=21M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=36ee2393a0e162a1a74dd70a08a88238; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=f5b8879d659ba8f87ebd0a33e0fde16f; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3e28a99b02c9ffdd58a16ca3851ed0e2; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=db91fef4a9579093d6caef667d0e368c; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7423; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labProtocolId=045C+,046C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=ecbffa0e373889a059f22c5ab8f7014c; size=3.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6384; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=497f6fbc4e9ae5619883093ac1a180f5; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapJunctions.bedRnaElements.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-16; dataVersion=ENCODE Mar 2012 Freeze; md5sum=f888848a2297b91615a6cd995ad90674; dateUnrestricted=2012-05-14; size=21M; dccAccession=wgEncodeEH002628; replicate=1,2; view=Junctions; labExpId=LID45613,LID45635; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapJunctions; subId=6054; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981248; donorId=58607680; bioRep=045N,046N; lab=CSHL; type=bedRnaElements; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep1; type=bigWig; md5sum=d3da319e8a5bdca58c8a02840aea8c08; size=201M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapMinusRep2; type=bigWig; md5sum=c0b5302e9413172e4379a44de90267ff; size=314M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep1; type=bigWig; md5sum=9f79d6dac6c64f87a6755fab87d37775; size=209M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapPlusRep2; type=bigWig; md5sum=beadc0ceaedaf92cbf073c5d0ab9c6e0; size=324M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7662; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; labProtocolId=045C+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=9d7949898014bdd68fde8fa84710f40e; size=356K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7663; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; labProtocolId=046C+; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=c65e4a075dd89b8c47fa0a9338f4ed11; size=349K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5776; geoSampleAccession=GSM981248; labExpId=LID45613; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=7b024c8a1ec7bd611746d9b852235283; size=249M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5778; geoSampleAccession=GSM981248; labExpId=LID45635; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=332a4e2c8eac31635d173780fc0d69ac; size=354M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7423; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labProtocolId=045C+,046C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=89e3f276fd3170e58ca5e8b6f734fb7c; size=4.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqImr90NucleusPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002628; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6384; geoSampleAccession=GSM981248; labExpId=LID45613,LID45635; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqImr90NucleusPapTranscriptGencV10; type=gtf; md5sum=e8b2a5a3b37a71db7b5c9fd301944079; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1; type=bam; md5sum=de9dcd8e94d9325d7d0b830a3c572b40; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep1; type=bai; md5sum=f5db64937e061d7636be066b1c781251; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2; type=bam; md5sum=e9a9d665dc638ddddce27899426c75ab; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaAlnRep2; type=bai; md5sum=13ad0a1ddac7fc309e3ac012fa1487c2; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f068c9484d61b4fb7a16d4b6fa37f4e0; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4de01ee131eee819ae99ec2d3ca0cb28; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1182368ba1ff694157fbbac58d212184; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=534e4ca9c746e38d37dc5e0623fd19fc; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=f4185d080d54c90b447b8f0cabb7e95f; size=1017M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=813312189bdf599e938f767592f3a3e3; size=953M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2397; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=ff79a03f694fda15a394e9ae5526fe1f; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2411; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=31774ba15a12315bcf427c293b97403c; size=970M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPamContigs; type=bedRnaElements; md5sum=afc3af783d345d2157f78061590fc883; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7012; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=519f79300fecee2d2ef17f9e65ef8828; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4588; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=00b0436f6e9004f8728081a0f72ec3fe; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=061d4a3ff7ee50f19bcd803babb97d86; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7481; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labProtocolId=001WC-,002WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4fa599871a4f8a214ad8c1764d07c9f4; size=5.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4588; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=20328ca80da3f656cb46ab43af433bf4; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPamJunctions; type=bedRnaElements; md5sum=b0e56dea806ba187617df2be00ac1171; size=8.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d6bc18fded9d70795be10330f7139c24; size=439K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8a52d7738c849c154711210fa20b6495; size=432K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4227; geoSampleAccession=GSM758577; labExpId=LID8659; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6923ed2e03bd42279fb9e410390b6447; size=173M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4294; geoSampleAccession=GSM758577; labExpId=LID8660; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=def12f50d05b1bc1837f0361db5d954a; size=168M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3648; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8befdd4138a675ac39ee5c4683ccabca; size=24M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7481; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labProtocolId=001WC-,002WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=34449b5fc96b8f80e48676484bec8e84; size=6.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000162; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4588; geoSampleAccession=GSM758577; labExpId=LID8659,LID8660; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPamTranscriptGencV7; type=gtf; md5sum=757aad7d58f9cbd57b8c77ce3ed92257; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep1; type=bam; md5sum=fe973d06b92dd8419a1264dff247b696; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep1; type=bai; md5sum=4d4b6abfa4ff6f0f689caa43ca8f6fc1; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep2; type=bam; md5sum=1004cf059b880cbd35ccda6a8925a808; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapAlnRep2; type=bai; md5sum=a4f4f49e92ccae73009a6b7028ed2deb; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapContigs; type=bedRnaElements; md5sum=09507a0239e560bb2a1e1f3fd3e7c9e5; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6968; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=70ea3345eb938ae9bca7c07ef4e26933; size=6.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4585; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=effb8cccb0191ac7ee7d2aeee5d57bd3; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ea1cf09130e51296fc6fccc91ad4f4a8; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d3d8734ce5213411d6b3e356a60f91f5; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=712ddbedbc5f4335eec9d112e8ca4b23; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=df05e88f24b16537d28e4280be6e5529; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=05ea8c47f9e610821014078b6a37e4e7; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7478; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labProtocolId=001WC+,002WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=190aea8b2981b9e50691ae63670865fb; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4585; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=82e1afc6821ed602d50e883c31579f8a; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapJunctions; type=bedRnaElements; md5sum=71a59b018c25078e8affdda5d85ea2b8; size=9.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep1; type=bigWig; md5sum=608d18e23e9a82e5739cf6889412e940; size=676M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapMinusRawSigRep2; type=bigWig; md5sum=66d076e7a7cf042682825662c2c658bc; size=707M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2478; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep1; type=bigWig; md5sum=25cd92ac00e069e1d64ea9761637ae18; size=683M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1919; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapPlusRawSigRep2; type=bigWig; md5sum=b09bf74c631f5c9c4baf82bda9dd7eb2; size=719M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=1ae9a1bfc768a975d4a0da6566249eda; size=639K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=decbce46df60abb7902816e97c59b9f8; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4273; geoSampleAccession=GSM765405; labExpId=LID16627; bioRep=001WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d893f1329f0fc154bfb8029d57639139; size=686M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4230; geoSampleAccession=GSM765405; labExpId=LID16628; bioRep=002WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2563272d75254ff1c410476f46788310; size=396M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3649; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5ec81c2aa41abd9de2f2b0502cfb032f; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7478; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labProtocolId=001WC+,002WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5fddcae2176bd5a7d5301e6bc9412d3; size=2.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000163; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4585; geoSampleAccession=GSM765405; labExpId=LID16627,LID16628; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CellPapTranscriptGencV7; type=gtf; md5sum=03b417bc2b50aa043c6ef664fc062cca; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1; type=bam; md5sum=6240c7fb95a9a460acb47f9d50aab122; size=3.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep1; type=bai; md5sum=8c3a1323da706273fc342ff9eb71a971; size=6.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2; type=bam; md5sum=e9b5a54cab5b51c11e1996d984fc565c; size=2.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalAlnRep2; type=bai; md5sum=296b9020125f71f4d0acac97238decc9; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalFastqRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840136; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=95b6b0776dcaaa3898af091018c28146; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalFastqRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE Sep 2009 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateUnrestricted=2010-07-22; subId=752; geoSampleAccession=GSM840136; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; type=fastq; md5sum=bfed41799fffb55a938c35bfa39e4c60; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep1; type=bigWig; md5sum=0bbb121f4ff9cfd78cc667d844def78b; size=266M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalMinusRawSigRep2; type=bigWig; md5sum=0a2a36f2d51c9acf19c044bf836a24c6; size=217M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=1; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-45; bioRep=gen0131WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep1; type=bigWig; md5sum=a500212157a56feeeb34006c2958aa8a; size=270M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=total; replicate=2; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000142; dateSubmitted=2009-10-22; dateResubmitted=2010-06-17; dateUnrestricted=2010-07-22; subId=1503; geoSampleAccession=GSM840136; labExpId=crg-53; bioRep=gen0132WC; seqPlatform=Illumina_GA2; tableName=wgEncodeCshlLongRnaSeqK562CellTotalPlusRawSigRep2; type=bigWig; md5sum=917dcac982a5b25da460327ad6b8180b; size=221M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3; type=bam; md5sum=eea03a9edcb0f9744974dd2cbd8702c9; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep3; type=bai; md5sum=86401a886eb232f521ccf6440d3f1e2d; size=8.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4; type=bam; md5sum=92e4e8bbf6190b9c0521f83d70ac7f45; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalAlnRep4; type=bai; md5sum=78a768bf7af375457be8e5c8bd53b13b; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalContigs; type=bedRnaElements; md5sum=0c0ac54270a9212e2be8fdaf7eacce33; size=11M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6941; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=915f2cc414757dfc5849385d992735a3; size=9.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4551; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b73eb8611badbf5b8ed37b1fb58763e8; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cdca582a8249195214cd51c2dde2ae74; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=cf9431dabe0b8e6ee01f112a540509e0; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f9f9137604a1a09d72c9e64259f2a4c6; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0ceb1b86f0bade4cc2024f2a1c00f754; size=8.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=af403e415ccd72853152c0261c22ab12; size=4.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7445; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labProtocolId=025CHt,026CHt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b3814bb05ebeb83cb4eb84b49eba4714; size=5.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4551; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4c424d8ace108af578f56a8660face5d; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalJunctions; type=bedRnaElements; md5sum=bee65b2dd8cb1699805bb2c4e422e4bf; size=13M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep3; type=bigWig; md5sum=a7419c20d86ef2f44e929ecf2cec9cf3; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalMinusRawSigRep4; type=bigWig; md5sum=f50eef37accf83ecf2f9b2ba89ed3ad4; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2711; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep3; type=bigWig; md5sum=03cd68e30fd135a54f1af1a785a647cc; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2713; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalPlusRawSigRep4; type=bigWig; md5sum=866c2b710a6ce5b57e56f4bdc3b65c22; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7667; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; labProtocolId=025CHt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=6f7d11d8edd26eea42794e8350dbb26f; size=340K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7677; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; labProtocolId=026CHt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a000e967d8592babd6dd4bb87a4f7ea9; size=338K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4189; geoSampleAccession=GSM765392; labExpId=LID9185; bioRep=025CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=89f02cd9a135fbf4e74ac5ab950a1283; size=335M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4236; geoSampleAccession=GSM765392; labExpId=LID9186; bioRep=026CH; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=7b6c493a200b0ed6eb670d33c33e4b45; size=415M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3641; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a0b363c7a5e894e1f6b6cc500189b807; size=25M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7445; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labProtocolId=025CHt,026CHt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d5cb183f327972bcbb45cace95aa4de5; size=6.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=chromatin; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000180; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4551; geoSampleAccession=GSM765392; labExpId=LID9185,LID9186; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562ChromatinTotalTranscriptGencV7; type=gtf; md5sum=83fc6243af9f489990608099bddfe90b; size=4.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1; type=bam; md5sum=5fdb7612b76789744089f3cfc15ad1da; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep1; type=bai; md5sum=fa501c1ed029cf6e394884cc2c0bc62a; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2; type=bam; md5sum=1cc9f24a47d51f908e28b9dbd150d8c6; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaAlnRep2; type=bai; md5sum=8d9aa5a6af495caa420e736ffdeec8c3; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=28f21b022be8811076c8ebb0da324560; size=4.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=657cb949063fa4781f0e2c7d773e6c5e; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f2cd760ada90478269daabfc3b0fba5a; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9be3f176e656eb5ab7bb39d63c084345; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=5c8a7bc406369cf6dba1a3288b2a6e5d; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=7c9cdf5b51f7ec412bd1d6114338d644; size=41M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3144; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=7fa29032cb023ea63f748a77ed5fba26; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3229; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=f310918158c99287dd2f3a2503ad4a18; size=42M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPamContigs; type=bedRnaElements; md5sum=44f1b478649c54aa67ebe6905c615675; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6966; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=3691a18511d55615175ffa294e375690; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4579; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=baa74efe6477bfcfb76065ff7ba57c9c; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1aebfa58994e7036409c8fca5cbda608; size=609K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7474; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labProtocolId=001C-,002C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=7f1abc6caac196d4af7224943bb3968b; size=818K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4579; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=edd7a515109a2480d99572defb95a24c; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPamJunctions; type=bedRnaElements; md5sum=b64cb6e548b6595f3d3af5d5826a0189; size=2.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a6136a9b9030d356f28dcd3cf166efc8; size=495K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=375364f75aef4768e4314cd5616e6bae; size=501K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4197; geoSampleAccession=GSM767849; labExpId=LID18545; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8a97a087c0cca258d192d4de38657b13; size=159M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4279; geoSampleAccession=GSM767849; labExpId=LID18546; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=678a27898eb074bc540f2367238d60b4; size=222M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3642; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=29bcc23d758e138dc7ade09be7c05cbe; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7474; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labProtocolId=001C-,002C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=873eacbc8a1c821d647052d3f330d27c; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000193; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4579; geoSampleAccession=GSM767849; labExpId=LID18545,LID18546; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPamTranscriptGencV7; type=gtf; md5sum=381595faa07c8e066d7093345cb2e9c9; size=4.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1; type=bam; md5sum=970d0822fe075949f8f822f20ab57b78; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep1; type=bai; md5sum=40116eb4022a6ca0379f98911b8514de; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2; type=bam; md5sum=d9959d0dfaa18f3e37539e9f6be7d47e; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapAlnRep2; type=bai; md5sum=249404a3674632d966ae511c0ccbc9a7; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapContigs; type=bedRnaElements; md5sum=dfa8e74cfa85a2018608ad51a5bf1610; size=8.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6960; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=9fce4c6abe2bb670929952b7ddbcbde2; size=5.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4572; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=84adc3ce8a502d928d643c476eb9a3ce; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=521ed7d0b3b6e8b8d5a0a177d13be8ec; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7d6fb0723fb5c2b48e40c6312fc9134e; size=5.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7b44779e825b569ee9dd4e6c8e80f1cb; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=14d9037323fca5c9627600d0db14cd86; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=09effa3d66b873a466337c45cc4c9193; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7466; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labProtocolId=001C+,002C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=e6f899f19873837e6a4509bfa63fc45f; size=980K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4572; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bba91af79382b4d10d17421266239e06; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapJunctions; type=bedRnaElements; md5sum=575304133809225281f6fdd1dd506a75; size=7.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep1; type=bigWig; md5sum=a46acf068ded034b2f836975fed93793; size=381M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapMinusRawSigRep2; type=bigWig; md5sum=0ceeee2459bd082f7165ddea60f06499; size=247M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2009-07-06; dateUnrestricted=2010-04-06; subId=1920; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep1; type=bigWig; md5sum=f14f05dcc6313dd263631c44a9d808a8; size=387M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=1876; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapPlusRawSigRep2; type=bigWig; md5sum=1f61a41057bbeba705f2495cc9428397; size=251M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=88673b25505750c6a2866b1d4cd0f048; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=e3d1b701d54f97f71412900d95e49b83; size=1.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4295; geoSampleAccession=GSM840137; labExpId=LID8465; bioRep=001C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=777d30422e4dc485203c79933231195d; size=76M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4192; geoSampleAccession=GSM840137; labExpId=LID8466; bioRep=002C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9875675a92b512a38571857561a606c7; size=33M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3643; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=0602fee6597fd452f84ac85872ed8da0; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7466; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labProtocolId=001C+,002C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6f54c982899bd8f9c462c2ad2846652a; size=1.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000140; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4572; geoSampleAccession=GSM840137; labExpId=LID8465,LID8466; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562CytosolPapTranscriptGencV7; type=gtf; md5sum=04221f45fb3bb43afd1148b0dc7fa63a; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3; type=bam; md5sum=117b6ad516aa9635af09df5759e4cf30; size=9.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep3; type=bai; md5sum=fd319c0884b9b23511923d23d9c52f69; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4; type=bam; md5sum=75d970e4409c81da2917a66c909079a3; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalAlnRep4; type=bai; md5sum=8605961b43d41933424140a831d9c773; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalContigs; type=bedRnaElements; md5sum=078ed6ada60b45231c5040f8966c3d25; size=13M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6989; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=ce93d0a648d643269763f92cf5c09adb; size=8.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4546; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ee4f5fe73aceec1320500c4020ba6768; size=18M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=022852bb433ad8f4000b042be127b777; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8e4e56af1cdb1ca43e82ed70ac1cf29b; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=77d110d985f402d285083cf016046f10; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=4de2378c4f16d365e41ace69b926d33c; size=7.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9f8e3cfc4b7f49576d62e0a01fe80dfe; size=6.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7440; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labProtocolId=025NLt,026NLt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6217009f67a0ca975903a7b15c4f1768; size=5.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4546; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=02d2c8bcfa5a7f95c06a44d0756d8c65; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalJunctions; type=bedRnaElements; md5sum=48d7191a1b5922ab234272cbbf1acf43; size=7.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep3; type=bigWig; md5sum=578797d0d5ae29c0f13544c01c5ea89f; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalMinusRawSigRep4; type=bigWig; md5sum=8fcfcf1fa46a40e78698c3a03004d5bc; size=926M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2706; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep3; type=bigWig; md5sum=6d9e6421bfa8e4a84b0b4f33d107494d; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2709; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalPlusRawSigRep4; type=bigWig; md5sum=8b5985acba736f586ed8c44fc8141072; size=949M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7670; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; labProtocolId=025NLt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a654770004dc293e7e888dcdc41a8fb4; size=325K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7671; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; labProtocolId=026NLt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bd406075c9d5821a880f23928560221a; size=339K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4285; geoSampleAccession=GSM765393; labExpId=LID9187; bioRep=025NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=9a8554644318c8f3df3677a2507c563a; size=386M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4228; geoSampleAccession=GSM765393; labExpId=LID9188; bioRep=026NL; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4faf79db0bd8301b6fdd70f7b7cf4064; size=396M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3644; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=e1d68998d28cbffd054503e46718a065; size=33M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7440; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labProtocolId=025NLt,026NLt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9b995a504e7959d5f6515a406dfd60da; size=5.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000181; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4546; geoSampleAccession=GSM765393; labExpId=LID9187,LID9188; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleolusTotalTranscriptGencV7; type=gtf; md5sum=28155f833fad8ae833a12ef89ad3cace; size=4.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3; type=bam; md5sum=8f393acaeef9a9f75c793947242e34d5; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep3; type=bai; md5sum=9246535b9f3da6ead533772816ba2ba2; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4; type=bam; md5sum=d942ee1a252d3141a6ddda357414560b; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalAlnRep4; type=bai; md5sum=aee06e459ea100cc1f16be858995fcaf; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalContigs; type=bedRnaElements; md5sum=57f1029e1e79656419812f779ecb5fad; size=12M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6934; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4d8f1c1268a31af54b7087deaf04fadd; size=9.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4545; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9758deef97da65466f7d6c73663d840d; size=18M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=76a2de381538c38e4bd608f33a5c74ec; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8797659e1d7cd45c7c9a5066dfbe6fcc; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9685688c9a0c31fea47d14dc20394365; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2957a3859912427acf78bd1e2d9ccaad; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9ff02541066ec968e5e4f38a325fc6e8; size=5.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7439; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labProtocolId=025NPt,026NPt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=60daa7f6cf2f5faf8cb22f53a87bea90; size=6.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4545; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=32f45a84e431a5a984cb1d52bab5fb2c; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalJunctions; type=bedRnaElements; md5sum=85b2bc1d2b1bf98775bb7266c577c1e8; size=8.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep3; type=bigWig; md5sum=c0b672e2d8fa5149b8522d1dc592c783; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalMinusRawSigRep4; type=bigWig; md5sum=7592e06c19aa3382fe784e2d2a32d8f5; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2710; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep3; type=bigWig; md5sum=f4e5079ad9f9382928af73ba0306bf26; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2712; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalPlusRawSigRep4; type=bigWig; md5sum=62f7ad1b84ad6e0fa390745c73081096; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7676; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; labProtocolId=025NPt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=aaf482c1c3cccf77190dd1b51aafb00a; size=336K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7683; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; labProtocolId=026NPt; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=6aba51fd2fdb882e18106324619cdae3; size=339K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4291; geoSampleAccession=GSM765390; labExpId=LID9189; bioRep=025NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=4809e0d902b3c5b7441f6d05e5b75e7d; size=443M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4297; geoSampleAccession=GSM765390; labExpId=LID9190; bioRep=026NP; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d77c60ad2f4ab9e38e479879152e81aa; size=448M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3645; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=26b761969212708830aa8e6ce203aa5a; size=30M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7439; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labProtocolId=025NPt,026NPt; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2223d6122fc262407e81a9e8566e04b9; size=7.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000182; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4545; geoSampleAccession=GSM765390; labExpId=LID9189,LID9190; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleoplasmTotalTranscriptGencV7; type=gtf; md5sum=52a6195376219204e07407fd9041e16f; size=4.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1; type=bam; md5sum=ae65b78648acd6900d466c33931c918b; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep1; type=bai; md5sum=b2a788aec352dc1d4cab0a80691afbbb; size=7.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2; type=bam; md5sum=2f263aaab224f88bdd96e9799b04ac97; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaAlnRep2; type=bai; md5sum=b32e76b21e25d2fa290cab2ce6a9a474; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bf027732b157669c01ecfffc2c4bfe6e; size=7.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a52942f5556ddf478c1af1860105e016; size=5.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=991a7413e437766fe8644d4743a7f564; size=7.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a71c761ec88f2d75745ea53019c3ca18; size=5.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=09962bc212f832284c6a85df39563b9b; size=309M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=387441ddd0a59e591d1faee16124afa9; size=292M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3145; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=9a36379a376f1d79debaa9888c823b18; size=312M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3146; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=2688cb8e457fb2e381cfb033cad181cf; size=292M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPamContigs; type=bedRnaElements; md5sum=a0513047f6251f6fda0f2f8433fb99b8; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6986; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=764639b21f3c3e5a08336684c102b565; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4541; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2d480fe3c3bf3cc5e81e25589d18b833; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4cbe72c53e45365e59b23684b76d27bb; size=5.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7436; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labProtocolId=001N-,002N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=17a2920851c9b15e7396ca9b1aee7925; size=6.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4541; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c60c52c99bebec686a686d002e9ff0e1; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPamJunctions; type=bedRnaElements; md5sum=55e4dd1132180a9e7937455e508367a0; size=6.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fe0ce2e7da624df7d95022d1b7924dab; size=424K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=d17734abfb1bdeeb88cf6b316c78e09d; size=429K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4259; geoSampleAccession=GSM767844; labExpId=LID9195; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b78295caf280dd7279f32f63b2405657; size=228M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4233; geoSampleAccession=GSM767844; labExpId=LID9196; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5a06e25ba4ea509c584253018d4550f5; size=172M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3646; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d0fdd6140ca14bf83ded0f8d462c65fd; size=26M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7436; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labProtocolId=001N-,002N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=149166534483f9afc30b479c5dd0cb74; size=7.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000194; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4541; geoSampleAccession=GSM767844; labExpId=LID9195,LID9196; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPamTranscriptGencV7; type=gtf; md5sum=e8738c465c7470c490c41e036a32c1de; size=4.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1; type=bam; md5sum=c417d4cffd914d97550b9c465601b599; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep1; type=bai; md5sum=372fc6807675cae972c86ff248457cce; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2; type=bam; md5sum=3dbc05fb17b6bcb1a752af403011aeeb; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapAlnRep2; type=bai; md5sum=7441ce01ce057a6fdeff0368ef290e4e; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapContigs; type=bedRnaElements; md5sum=e16e5be18430e9021fa6bc6f787225bc; size=14M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6993; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8d7f5b07002c3d217ddef353bb8736ca; size=8.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4555; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=683ade1043bc45600e4487928c6b3fae; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=39b4ac865e711198208d16dcc10e3f3b; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b255b5cfefe06d6fdd9455b20de68b2f; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8ebf0c0dea6fd3ba44914a198ef1e8ee; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2e18700d785a73d50b1d59049b4104b8; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5983fff3749886f9ac52dbd4ba9e8784; size=4.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7450; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labProtocolId=001N+,002N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=bf2297d98a35ed90713753c2537d1a73; size=4.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4555; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=177af4742ae1844edc8a5ad120e0bde2; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapJunctions; type=bedRnaElements; md5sum=3fd8c1316b2d65c0a5cadd051547c191; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep1; type=bigWig; md5sum=d6ec7a9e7fc0cdcc63c250e84f97cbf1; size=914M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapMinusRawSigRep2; type=bigWig; md5sum=40c8405c7a7a907cab296276eb2b1587; size=864M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=1921; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep1; type=bigWig; md5sum=7945a7774537bd46bbf582589905ba7c; size=935M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1946; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapPlusRawSigRep2; type=bigWig; md5sum=e7eafdcc79402e8bfb4bef25962167a7; size=881M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=64e3ff614965c03e5fe2e019a2c48dfc; size=624K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=964347063bc77691bd9a47dcad820216; size=605K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4203; geoSampleAccession=GSM765387; labExpId=LID8556; bioRep=001N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=0c1a7471c25dc400158e290e782d2346; size=135M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4220; geoSampleAccession=GSM765387; labExpId=LID8557; bioRep=002N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=89d3545026436dd3e3108d3ee5d10c4c; size=144M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3647; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=695f62d057e4f4c23a849678c422ed5e; size=26M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7450; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labProtocolId=001N+,002N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a52ff5f5577f41c953d5478e23380e78; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000174; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4555; geoSampleAccession=GSM765387; labExpId=LID8556,LID8557; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqK562NucleusPapTranscriptGencV7; type=gtf; md5sum=3f6a96f4e62747b2c06b9511bcd43186; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1; type=bam; md5sum=4d55aa4b90bea5a9afa6aca6434bb0f2; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep1; type=bai; md5sum=7b2a5789cca302eee6a4a4276057bcde; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2; type=bam; md5sum=c41dc0bea9c5b133d145b02a8962f775; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaAlnRep2; type=bai; md5sum=6daf4830a69ff0e5df81032de0d0232f; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=383fce00d27f255a4522952f85aee2aa; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=70a9b62da2aeccb7ae4e99f876e7d103; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e971cba2f5bb14e0e2c23f0d2ac78828; size=7.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=842b3f20cd41dfbc516c706aa96d6aa2; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=aa80c19ed93ef6f17256ed446a6e1d4a; size=393M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=143f620a7b2bf7c5e348a07fe1160492; size=356M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2714; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=694efcb5684cde7c88f8a26ea11cf844; size=413M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2708; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=53e50aab7ee470242b06cfbe58451fd9; size=377M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPamContigs; type=bedRnaElements; md5sum=d3d81db9fa5d0d26d90ce0763122ac20; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6964; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=804175c3be1979893716ec49a8aba93d; size=7.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4578; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2c6cbeac620e20b1a41aef4c81f8aee0; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=1388ae48c3f6e5ba659db37585e3a291; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7473; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labProtocolId=015WC-,016WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=5956fc9e898c1dd4fab0e5553c9cd1a4; size=3.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4578; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=32a29bd31314f5ca424ee927c9a7e0e3; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPamJunctions; type=bedRnaElements; md5sum=d3fa27bd4bfda71944b4e143aacfc944; size=4.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=9e22ad97b37261f654482a066a19a53b; size=432K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=162a4c770164f76d1e799dbc116e99a9; size=427K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-05-07; dateUnrestricted=2012-02-07; subId=4056; geoSampleAccession=GSM767851; labExpId=LID8824; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b70ce423111d13e546ffd55abeccfd99; size=839M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4241; geoSampleAccession=GSM767851; labExpId=LID8825; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b15b91b762c1b522876da95e411bd542; size=673M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3650; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4318b096974e48896cdb325122d60f55; size=7.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7473; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labProtocolId=015WC-,016WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d48599eeaf39b250701618467f33e42e; size=3.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=MCF-7; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000183; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4578; geoSampleAccession=GSM767851; labExpId=LID8824,LID8825; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPamTranscriptGencV7; type=gtf; md5sum=814c5b1f19daf517e0e6d5cf234ff8f9; size=4.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1; type=bam; md5sum=8a53cd697bbb102029f652c7e445fb6e; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep1; type=bai; md5sum=f0d64145cff16bea967b5fbff9184731; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2; type=bam; md5sum=4f9e470396662b6f3be3ce8d3d488f9c; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapAlnRep2; type=bai; md5sum=eadef2f3c2b511b129467a8dd7d44007; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapContigs; type=bedRnaElements; md5sum=b7035d8adebecc8397487f8943f4db06; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7023; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=55c5a342079624346af201425b3ccdf9; size=7.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4600; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=87876ee9eef79b94531cc8c1b5bc0dd7; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bc1db55760a4db6f004e87adebaa1606; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=f5269651b271c83911e2b3075b871a29; size=8.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7dfef579d8a5d75a762b9ece8266ac8e; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e98ddf6ae3870b00a4a5a986b8fc5dc5; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=931f65c019ee4819a46d3af87f550d3d; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7493; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=92eaa0906d7c1cd96be445b45324ee05; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4600; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7b670e1bac5cb360dddba66fb3def263; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapJunctions; type=bedRnaElements; md5sum=0762d1f63e2d760f5bb0da30f25024f6; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep1; type=bigWig; md5sum=ec7ccbe7d927788addecd9d1be55b750; size=888M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapMinusRawSigRep2; type=bigWig; md5sum=198402c259773888370bd42341dab917; size=825M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2475; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep1; type=bigWig; md5sum=93b15cecd03b633c1460bd842384563d; size=929M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2010-10-05; dateUnrestricted=2011-07-05; subId=2476; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapPlusRawSigRep2; type=bigWig; md5sum=2d6773c082d915cd2ef0da0b787c3127; size=867M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0b785e19448903c58d6397dc4d5d09dc; size=613K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=66ab2116462c38dc31653f25cc7ca9b3; size=615K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4248; geoSampleAccession=GSM765388; labExpId=LID8686; bioRep=015WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=98645c20ecc2efc23139de403939c698; size=154M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4234; geoSampleAccession=GSM765388; labExpId=LID8687; bioRep=016WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=231fa72c487d9bcffb208a7138df4da6; size=239M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3651; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=87a6d60a7d6244fe658d16d775a99f40; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7493; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ce80749c4bcdab456a7feade6a19d25e; size=2.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000175; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4600; geoSampleAccession=GSM765388; labExpId=LID8686,LID8687; bioRep=015WC,016WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CellPapTranscriptGencV7; type=gtf; md5sum=dff0e7daa3115b89d54456d1f975c53f; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3; type=bam; md5sum=844f41cc1487356459b19ab8271f6426; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep3; type=bai; md5sum=cc388f507a8c33718d4d923c5155a448; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4; type=bam; md5sum=d94fea31ceba57837f4fb77701e7cb04; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapAlnRep4; type=bai; md5sum=81bdc4efb52a6d1ebffb9abd195310b1; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6019; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapContigs; type=bedRnaElements; md5sum=1a73d67426fd1d857d410f6ebafa6c60; size=15M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6931; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=c8e783ee69cdbaa56fc52b87b0f26ac3; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6365; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=9bd0171a8c0164ede8dd1b741b22fe38; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=1e97c78cd3985dff0075dd18ffff7eae; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b8b64ab3978bec6a0c4bf79ca18c581b; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3833a52680c66e8b9de59ae2f42c0217; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=5ef6858ff60e3765c3560ca1259c8bc0; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7403; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labProtocolId=089C+,090C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=7f2554036bab86b66867067462dba63a; size=1.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6365; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=da3aeb1beaa8a8718e8a4ec2f0579b04; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6055; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapJunctions; type=bedRnaElements; md5sum=f944aa0562062872a3920e5524139e4f; size=17M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep3; type=bigWig; md5sum=ce8138d943c85b3606840553e8a86fd3; size=138M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapMinusRep4; type=bigWig; md5sum=e7f57a94555191906d3459fafc43759c; size=137M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep3; type=bigWig; md5sum=6842409515f268c0df7dae91b099a1ee; size=141M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapPlusRep4; type=bigWig; md5sum=dd247d57f160dcd946358c1a3449d81d; size=140M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6907; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=511eb84fa263d1cf684e2c76c87cfc00; size=365K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6905; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=fea255c5e4e0c188c5f5e8ea72905600; size=372K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5792; geoSampleAccession=GSM981252; labExpId=LID46857; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=173467631aa65d7a2c8b76d8c86642d3; size=753M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-02-25; dateUnrestricted=2012-05-14; subId=5883; geoSampleAccession=GSM981252; labExpId=LID46858; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=e988d204e92cedbb468fdfb6c11f49c8; size=709M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7403; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labProtocolId=089C+,090C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=adf9b020bb6e4ba5d8c514acb78d883e; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7CytosolPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002633; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6365; geoSampleAccession=GSM981252; labExpId=LID46857,LID46858; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7CytosolPapTranscriptGencV10; type=gtf; md5sum=849e99c1748bb95b10e452e884f951e5; size=5.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3; type=bam; md5sum=95d36be8fcdfa1d0e7c83b33d1482a92; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep3; type=bai; md5sum=ce6274961f4117a0fb79e064f30ef237; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4; type=bam; md5sum=35af091369b811d6539ec05fb062131c; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapAlnRep4; type=bai; md5sum=c1d2a7699c6bc59329d509582fe7b4d9; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6018; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapContigs; type=bedRnaElements; md5sum=1235edb43055df24b7b2d65286aee189; size=36M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=91bdc831af8df014873798543aca2521; dateUnrestricted=2013-03-02; size=25M; dccAccession=wgEncodeEH002627; replicate=3,4; view=ExonsDeNovo; labExpId=LID46859,LID46860; subId=6954; cell=MCF-7; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981245; bioRep=089N,090N; lab=CSHL; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6364; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=8af15f0976b9a50a69b1b01001d9e72d; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b1c4c38a7b0a4fc61e117116e6d1820d; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=71dd60fe297361bad936a707ee3d6e28; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=01827929b1923f51b12053c1f0d514af; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=defabd118276ecefd853c8e338fca02e; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=089N+,090N+; md5sum=e894b47c48154a48d4f1ef8ee29fdb91; dateUnrestricted=2013-04-16; size=6.8M; dccAccession=wgEncodeEH002627; replicate=3,4; view=GeneDeNovo; labExpId=LID46859,LID46860; subId=7415; cell=MCF-7; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981245; bioRep=089N,090N; lab=CSHL; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6364; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=026eb9ebd9ae84120719d7e76a3efe99; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6056; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapJunctions; type=bedRnaElements; md5sum=0f6e076fd874b3981c6773eaf9901ac1; size=18M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep3; type=bigWig; md5sum=caed5357d67e78b7b9dcdd273914c97c; size=345M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapMinusRep4; type=bigWig; md5sum=ec1a6bd8011455d6ed6bd00c9c316dd6; size=320M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep3; type=bigWig; md5sum=a25ea03d5501e52e4c46f7a8e32f5b4c; size=360M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapPlusRep4; type=bigWig; md5sum=5754036857bce7b8987b7e355d0bf194; size=334M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6884; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=545c67a58f3916afd0fd3698a50859c6; size=376K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6864; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=c0d0819e3833ab4e5f7df7620d5f63af; size=380K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5774; geoSampleAccession=GSM981245; labExpId=LID46859; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=755b457520d07d7e5d60864bf2e46ffc; size=477M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-02-16; dateUnrestricted=2012-05-14; subId=5760; geoSampleAccession=GSM981245; labExpId=LID46860; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=9c7590a1652bdd8593f8bbd77c86831b; size=524M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=089N+,090N+; md5sum=924fc5bbfb63fcb689090c1f6681b401; dateUnrestricted=2013-04-16; size=7.6M; dccAccession=wgEncodeEH002627; replicate=3,4; view=TranscriptDeNovo; labExpId=LID46859,LID46860; subId=7415; cell=MCF-7; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981245; bioRep=089N,090N; lab=CSHL; type=gtf; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMcf7NucleusPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002627; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6364; geoSampleAccession=GSM981245; labExpId=LID46859,LID46860; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMcf7NucleusPapTranscriptGencV10; type=gtf; md5sum=d50761ba41d5be51467085980edf35b7; size=5.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1; type=bam; md5sum=3bade8f53b9b955eca1e4067bea8b6ef; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep1; type=bai; md5sum=4ae12f6fd63a2dff47d95d3e54595842; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2; type=bam; md5sum=ff6b27d74f04471d7d0eaf322976ecf8; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamAlnRep2; type=bai; md5sum=a062ee60c57183d021c4f044118a8023; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6042; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamContigs; type=bedRnaElements; md5sum=33fed4701771d39094fec19762721e85; size=15M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamExonsDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=c3cef2629c7fe17ea9e8ad0a98fe9c31; dateUnrestricted=2013-03-02; size=11M; dccAccession=wgEncodeEH002668; replicate=1,2; view=ExonsDeNovo; labExpId=LID44657,LID44658; subId=7018; cell=Monocytes-CD14+; rnaExtract=longNonPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981259; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6389; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3f9968dbdb44babeba61f36a8b3505fd; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd1Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc72f5b7cb8253f1fce2f75b7bc44776; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd1Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=17aae206bf4c19d199d0f8fd48bd1570; size=5.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd2Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fc3ab4773d17259c64c1ac2b4a63aec9; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamFastqRd2Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=88b405389db82c3809a3933d67ee40cc; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamGeneDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=039WC-,040WC-; md5sum=f801dda52f5261018b953690ff098397; dateUnrestricted=2013-04-16; size=3.7M; dccAccession=wgEncodeEH002668; replicate=1,2; view=GeneDeNovo; labExpId=LID44657,LID44658; subId=7429; cell=Monocytes-CD14+; rnaExtract=longNonPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981259; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6389; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=95c0b288e664e7be502b86cbee7ef33a; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6071; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamJunctions; type=bedRnaElements; md5sum=2437768371d09d94659391542f3b030d; size=7.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep1; type=bigWig; md5sum=9a506db8d54732862f80a18968567fc7; size=182M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamMinusRep2; type=bigWig; md5sum=51ef1f65060e61314a1e86a77e0634b4; size=132M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep1; type=bigWig; md5sum=0891ff7691806519ec3ba3997a64b923; size=191M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamPlusRep2; type=bigWig; md5sum=91fd26ec9b109384dc0a7aed05d28a0c; size=138M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamProtocolRep1.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0e39010f90e4aca78a762b4eccdb4ae1; size=615K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamProtocolRep2.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=4319d8b33c711dc469a22d72f39ab2bd; size=605K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5789; geoSampleAccession=GSM981259; labExpId=LID44657; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a45df7b9231674d9325265d4c16d7513; size=548M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-02-16; dateUnrestricted=2012-11-16; subId=5764; geoSampleAccession=GSM981259; labExpId=LID44658; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=b46366f72671a797e9ca8bb3903a343d; size=484M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamTranscriptDeNovo.gtf.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=039WC-,040WC-; md5sum=8b1a481d54751151f152da99bcc17eee; dateUnrestricted=2013-04-16; size=4.2M; dccAccession=wgEncodeEH002668; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44657,LID44658; subId=7429; cell=Monocytes-CD14+; rnaExtract=longNonPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981259; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPamTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002668; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6389; geoSampleAccession=GSM981259; labExpId=LID44657,LID44658; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPamTranscriptGencV10; type=gtf; md5sum=ee9add846019ffcbef7e807dc2c75254; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1; type=bam; md5sum=b39ad7d1dbd6a44599d40b16c41ca99a; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep1; type=bai; md5sum=98406967d64ef16643e531ab884c66f3; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2; type=bam; md5sum=d090272b40cf392b3488b525b96c5239; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapAlnRep2; type=bai; md5sum=3a6ff505c4980c6a3d8eeb074d3eea29; size=6.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6022; geoSampleAccession=GSM984609; labExpId=LID44594,LID44497; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapContigs; type=bedRnaElements; md5sum=44bf13306e4fa6c59ebf08d8371a62a5; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapExonsDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=3e47f7ad62d70b4980053f0c830b7fca; dateUnrestricted=2013-03-02; size=13M; dccAccession=wgEncodeEH002672; replicate=1,2; view=ExonsDeNovo; labExpId=LID44594,LID44497; subId=7011; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM984609; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapExonsGencV10.gtf.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-27; dataVersion=ENCODE Mar 2012 Freeze; md5sum=cbaf1900a61e9ab8739f6f37b3dad66e; dateUnrestricted=2012-05-14; size=20M; dccAccession=wgEncodeEH002672; replicate=1,2; view=ExonsGencV10; labExpId=LID44594,LID44497; subId=6382; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM984609; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd1Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=bf1f5e8b3ca82d0c87f50e6d8313aa20; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd1Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=792a76d277ae211a322f66db333259a5; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd2Rep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=0ac05de75b2e16675c1a6294d2be6fa5; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapFastqRd2Rep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8706f21f2a7ddf84c832c6666011403d; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapGeneDeNovo.gff.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=039WC+,040WC+; md5sum=e98d363f81217dce64dd667f57ec6eda; dateUnrestricted=2013-04-16; size=1.5M; dccAccession=wgEncodeEH002672; replicate=1,2; view=GeneDeNovo; labExpId=LID44594,LID44497; subId=7421; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM984609; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapGeneGencV10.gtf.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-27; dataVersion=ENCODE Mar 2012 Freeze; md5sum=8182a03183318c4cf10459022aa3746a; dateUnrestricted=2012-05-14; size=1.9M; dccAccession=wgEncodeEH002672; replicate=1,2; view=GeneGencV10; labExpId=LID44594,LID44497; subId=6382; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM984609; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6060; geoSampleAccession=GSM984609; labExpId=LID44594,LID44497; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapJunctions; type=bedRnaElements; md5sum=657e558e117d7e7d5e5ef6da5058b2ec; size=9.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep1; type=bigWig; md5sum=f09524f9a056675a80dc3820440253d4; size=187M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapMinusRep2; type=bigWig; md5sum=74b7bd550626c4454e8da5f55d842221; size=106M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep1; type=bigWig; md5sum=841b13fa779597939df632254fce633d; size=193M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapPlusRep2; type=bigWig; md5sum=a32ba42348062f845d65bc14713b5802; size=109M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7672; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; labProtocolId=039WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fb0991955e60b3402ec43b22e0d711d1; size=363K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; subId=7681; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; labProtocolId=040WC+; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=176279753fa90338b442b98ccac20a97; size=368K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5785; geoSampleAccession=GSM984609; labExpId=LID44594; bioRep=039WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=911fdbea85b3db86dc8a4d6c2b03391b; size=983M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002672; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5773; geoSampleAccession=GSM984609; labExpId=LID44497; bioRep=040WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=786f7731986ad8c4bb1c13eff4fa2085; size=525M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=039WC+,040WC+; md5sum=a399c1e2bcdde781d5f9375fd50f6965; dateUnrestricted=2013-04-16; size=2.0M; dccAccession=wgEncodeEH002672; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44594,LID44497; subId=7421; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM984609; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqMonocd14CellPapTranscriptGencV10.gtf.gz seqPlatform=Illumina_GA2x; composite=wgEncodeCshlLongRnaSeq; readType=2x76D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-03-27; dataVersion=ENCODE Mar 2012 Freeze; md5sum=5547ea5d21ece95c236e85f8266dd323; dateUnrestricted=2012-05-14; size=4.9M; dccAccession=wgEncodeEH002672; replicate=1,2; view=TranscriptGencV10; labExpId=LID44594,LID44497; tableName=wgEncodeCshlLongRnaSeqMonocd14CellPapTranscriptGencV10; subId=6382; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM984609; donorId=RO01746; bioRep=039WC,040WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2; type=bam; md5sum=be85c4e0c78a3dd8e34f85fa58251d7d; size=24G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalAlnRep2; type=bai; md5sum=581a9047438f4bc2e35010b0693d7b65; size=9.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf00608013CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=0739af44b9d7f32d76a72075d09a341d; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf00608013CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c8ab6affaff91f0b26ee85d6bb53cfef; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf00608013CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalMinusRep2; type=bigWig; md5sum=80ef57cbcba3a9d70daf096cfcbebde6; size=284M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf00608013CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf00608013CellTotalPlusRep2; type=bigWig; md5sum=0ae8dd04e50219bfcffde530081af25e; size=292M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf00608013CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5865; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=dc4371d6fe885ee9cc2a33667084f3da; size=235M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1; type=bam; md5sum=fae72b81d7df97d601119b9afc104ca8; size=24G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalAlnRep1; type=bai; md5sum=22752bad04e5358220a455971d2a3a01; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf70717012CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=aa581cd55cb8644d776ac755b47bf1ea; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf70717012CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=305ef1a624983d79211f30906ff10654; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf70717012CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalMinusRep1; type=bigWig; md5sum=64a39bdb1edff95be0e878e11a9415c1; size=353M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf70717012CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdf70717012CellTotalPlusRep1; type=bigWig; md5sum=5975e7cef4141548e622c753c632064c; size=368M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdf70717012CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5893; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=114f9b7ca4044dd2275706052687dfa6; size=240M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6041; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdfCellTotalContigs; type=bedRnaElements; md5sum=0914b6755916a0dd202f9598507328de; size=34M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=c5da3566684b2730d1d0c7bc9df6fb33; dateUnrestricted=2013-03-02; size=23M; dccAccession=wgEncodeEH002677; replicate=1,2; view=ExonsDeNovo; labExpId=LID47247,LID47248; subId=6992; cell=NHDF; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984612; donorId=7071701.2,0060801.3; bioRep=049WC,050WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6388; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=c2489699b257d23140eef1784778cc02; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; md5sum=3c2192de5f42ff4651247f897f508c0d; dateUnrestricted=2013-04-16; size=8.1M; dccAccession=wgEncodeEH002677; replicate=1,2; view=GeneDeNovo; labExpId=LID47247,LID47248; subId=7410; cell=NHDF; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984612; donorId=7071701.2,0060801.3; bioRep=049WC,050WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6388; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=65f49b2192a1b7b3118aca45387ada15; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6070; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdfCellTotalJunctions; type=bedRnaElements; md5sum=b9fdf573cfbfe63f64bea344fe3570b6; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7071701.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6877; geoSampleAccession=GSM984612; labExpId=LID47247; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=5d3567b0fcd08a7a82affe4b9be1d4c9; size=302K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=0060801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6889; geoSampleAccession=GSM984612; labExpId=LID47248; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=1855427c19db51fb21ad0ce6eade2964; size=296K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; md5sum=fba7267288907905970cbc26c46ea026; dateUnrestricted=2013-04-16; size=8.8M; dccAccession=wgEncodeEH002677; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47247,LID47248; subId=7410; cell=NHDF; rnaExtract=total; spikeInPool=Nist13; geoSampleAccession=GSM984612; donorId=7071701.2,0060801.3; bioRep=049WC,050WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhdfCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=NHDF; localization=cell; rnaExtract=total; readType=2x101D; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002677; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6388; geoSampleAccession=GSM984612; labExpId=LID47247,LID47248; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhdfCellTotalTranscriptGencV10; type=gtf; md5sum=6e4cbc45ec8fe8eba28e8215c68aab0b; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1; type=bam; md5sum=ba815560802acdc64f8eb11c8a11e1bb; size=9.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep1; type=bai; md5sum=87f9e569038e345118b792de3bdea2d9; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2; type=bam; md5sum=f94a7cfe30a0607020b0df37d8efd3ed; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep2; type=bai; md5sum=9cbf8fa98b0d83ce9a1f2f04d061ab72; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5; type=bam; md5sum=7bab32ad48f5740293502e56cb220a63; size=4.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaAlnRep5; type=bai; md5sum=ee9d44d24e56cb9b3e9477adeede18dd; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=75c68fd449e4813fc8cdeaa1d1bb83e9; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=5ccfba41325768da4c5549ebb8884bde; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd1Rep5.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=43b179e25ba1e0766b46c1659d12e338; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=135d5629f47bc52e92ed836b4650d2ef; size=7.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9b924d2e8a1f7f0477cf3c0bad93df45; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaFastqRd2Rep5.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9ea3fc3272d2cd09ee98a6a8a9834c1d; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=d5f7326ea9cf5754f5421fa36338a714; size=804M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=14dc22f749a4b3b60b3c864740caf6a8; size=564M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep5.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaMinusRawSigRep5; type=bigWig; md5sum=3133f7187f24ac39949d985b168767be; size=162M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2413; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=887d4676a036a3a61d2a5f89ce4ab71f; size=835M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2414; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a5d23a295cd0ebdd1047c1f460188e66; size=586M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep5.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2010-10-25; dateUnrestricted=2011-07-25; subId=2558; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellLongnonpolyaPlusRawSigRep5; type=bigWig; md5sum=47544e596305a63c36946060f3f67be4; size=167M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamContigsV2; type=bedRnaElements; md5sum=715e0bad6dc206c3ca6a7ea50471fe0f; size=11M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6998; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6e2d66639f038a7f7d62b65cbb15db4d; size=8.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamExonsDeNovoRep5.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6975; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4a979571c691449b68005bd4b4232d1b; size=2.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4567; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=725b80d884eaa10e031480bc0d860002; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamExonsGencV7Rep5.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4594; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=22027259795d8b883615415ff265b952; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3657; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=23f9e197fb1c78f415be1536ec91459b; size=461K; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamGeneDeNovoRep5V2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7487; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labProtocolId=035WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=8d8a8374678454b788fa78811dfa2ec3; size=503K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7460; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labProtocolId=007WC-,008WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=1c3ba3e4c0372bd1378af83e57ce12a3; size=3.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4567; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=61c8d2d9ad7f073b5c1e1b396f2351d3; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamGeneGencV7Rep5.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4594; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ee03d88791ff770da4f538574f9a8033; size=1.8M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3657; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamJunctions; type=bedRnaElements; md5sum=958fbd2f5cf6633133eaa3b2bb8ea815; size=2.3M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=15b2e4efff20f8b6e6347d8e7d1523c6; size=434K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=0df8cebf5806287e27118bdeaf0f2c44; size=432K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamProtocolRep5.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a0e382472b10ad9b067cac3c51fcca1d; size=432K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4216; geoSampleAccession=GSM765398; labExpId=LID8665; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=f76c53dabcb691459200cfb73384117c; size=290M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4289; geoSampleAccession=GSM765398; labExpId=LID8666; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e65b0b5d33dc626a7270d46a3c9fd705; size=289M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamSpikeinsRep5.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4240; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e7858f54ad2b08a10b263ac0117fda7e; size=554M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3657; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d52fa8d3fdc74f52d1b3b987826d9ccd; size=3.0M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamTranscriptDeNovoRep5V2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7487; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labProtocolId=035WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=cf1b38c11fdc022485132f4781497dc3; size=681K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7460; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labProtocolId=007WC-,008WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=fdd1ef59bbe2a409a03505cdd7467fc6; size=4.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4567; geoSampleAccession=GSM765398; labExpId=LID8665,LID8666; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7; type=gtf; md5sum=ff4d40b5ae929a2d4041231dac69ea54; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7Rep5.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000164; dateSubmitted=2011-07-14; dateUnrestricted=2012-04-14; subId=4594; geoSampleAccession=GSM765398; labExpId=LID8830; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPamTranscriptGencV7Rep5; type=gtf; md5sum=2c38a07267bf15feae17b718651c1abe; size=4.0M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1; type=bam; md5sum=fdb107e530b460d85d2b8065046d30ca; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep1; type=bai; md5sum=b5ed2e95c70bdc9600d29b859867cca0; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2; type=bam; md5sum=03533a790e8de262cfa787b6dd5b7afa; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep2; type=bai; md5sum=597194fc38a6a12190a406a18e2da9fe; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-09; dateUnrestricted=2012-03-08; subId=4055; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5; type=bam; md5sum=3791b2508d5c8a6f7449030edaee081e; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-09; dateUnrestricted=2012-03-08; subId=4055; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapAlnRep5; type=bai; md5sum=e4b80d9277f10b4eaf6163b858024771; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-02-10; dateUnrestricted=2012-05-14; subId=5612; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapContigsV2; type=bedRnaElements; md5sum=4d0d72a45de90ac2349cd41078e9596d; size=13M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7020; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c2ee26c3ca15614dd269f52ab0962ad8; size=7.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapExonsDeNovoRep5.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6962; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=4c86c4a940a82cc846fa370ef9f90847; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4591; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ec64ee77cb3eeeb6b45e5de8e928b974; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapExonsGencV7Rep5.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4574; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=28c473dee57cc07af40bc1539ed566b4; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ffa3e44ec4fbd82a7a501bf4f24d08b3; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=d75c60cbbd38d5ed7cce1fc7f440371e; size=9.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapFastqRd1Rep5.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=36e71428a848cafd390ba8acdbcb536c; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c1b3d38d247d925ff9be02db2de8e3bd; size=9.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7834c45f18ebf4c5e0821afd68222088; size=9.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapFastqRd2Rep5.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b40a359f6ac9e778155b3046c0c78562; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3659; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=819923c32c333e7af2ec9ee6532184c3; size=586K; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapGeneDeNovoRep5V2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7468; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labProtocolId=035WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=fa0a44ffe15e35372ae20b7fd7d4b2f2; size=559K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7484; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labProtocolId=007WC+,008WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=201cd95ba2d58f707953b1b0b0886036; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4591; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9e2b1f3d480663fa053c6019a8dad7b3; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapGeneGencV7Rep5.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4574; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4f5c2266c474c5cf805587447c38f1c3; size=1.9M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3659; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapJunctions; type=bedRnaElements; md5sum=92e19e55055e0dd805de7849751c168a; size=5.5M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep1; type=bigWig; md5sum=fa321fb9b90eff05c3a62915ede57009; size=641M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep2; type=bigWig; md5sum=6799ad68dad862733e89182c81885def; size=525M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep5.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapMinusRawSigRep5; type=bigWig; md5sum=55c7a8f89b3df6076776e73f5cd90a70; size=374M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1947; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep1; type=bigWig; md5sum=50538ed59934b01298a5baa8bd351ba9; size=665M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=1948; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep2; type=bigWig; md5sum=f5050b3d980fe128493e476d8d38642b; size=543M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep5.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2467; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapPlusRawSigRep5; type=bigWig; md5sum=b34a5c33ee66f69b25c14fec3156f9ad; size=384M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=09d462d51c22eae7c1259d11927f376d; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=812d49c7a74ce0a2c88b40bdb8b18ac7; size=1.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapProtocolRep5.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=00432c33ecbb7a2be5105adb6c27da34; size=553K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4186; geoSampleAccession=GSM765401; labExpId=LID16631; bioRep=007WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e95bea1b5a19f5bf0014900faa1e46c2; size=434M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4194; geoSampleAccession=GSM765401; labExpId=LID16632; bioRep=008WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c581ccf620d453ffb10948f668a94b09; size=398M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapSpikeinsRep5.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4219; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=28eff96a6fa0d774158a5279ed7f291b; size=263M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3659; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=77801c03809242b4be449e1bb42f7338; size=8.1M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapTranscriptDeNovoRep5V2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=5; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7468; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labProtocolId=035WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=29ea3910c845e208648629499c8a5b58; size=905K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cell; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7484; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labProtocolId=007WC+,008WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=15b398008f1bc93e25a0818ab750f0c7; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4591; geoSampleAccession=GSM765401; labExpId=LID16631,LID16632; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7; type=gtf; md5sum=e69f35ee3ab615eefd9ccce307aeca47; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7Rep5.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000167; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4574; geoSampleAccession=GSM765401; labExpId=LID8694; bioRep=035WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCellPapTranscriptGencV7Rep5; type=gtf; md5sum=8dd1b15fbc3d9a85ca10e1de207ace9b; size=4.4M; replicate=5; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3; type=bam; md5sum=f9b10cf320669cd58973b58c54c387d5; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaAlnRep3; type=bai; md5sum=3ddedce085c3343cd4cd1a9ac35620da; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=06cb0c1084e749fe8c9e723f00650b3f; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=720e410ea53d2ee90f4d0f6cf915982d; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=2bc108cf833b0eb748003510ac2965c8; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3147; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=e99d6004e9c38e8a834e1ac6ccec0bc9; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - Replace . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5612; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPamContigsV2; type=bedRnaElements; md5sum=017aba60d0122b148c3cca7d7e9075dd; size=3.6M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6978; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=26f64a56d062d8cc4dc280b250d1a5fc; size=2.6M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4598; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=29f567bbfd9cf02129b653d417747480; size=16M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3652; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=df9e9730efa6ddd07bc5250aba66b259; size=326K; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7490; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labProtocolId=027C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=a235efa3623860a186066fd136733dee; size=388K; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4598; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8fec64679a6fdb52458409a8636097a5; size=1.8M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3652; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPamJunctions; type=bedRnaElements; md5sum=60fec923f4af2ed87685e16d5059c0e7; size=1.7M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4245; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=c0e625e8d2f1ce3ae19bac52b2c8bdc0; size=65M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3652; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7653ff7942e66b9105c412539cbf3eb7; size=2.4M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7490; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labProtocolId=027C-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a4f54df43e4d54ccb4d2f5e4e8d0809f; size=564K; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000195; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4598; geoSampleAccession=GSM767843; labExpId=LID18554; bioRep=027C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPamTranscriptGencV7; type=gtf; md5sum=bb2d63629420f8b381faee41951d1a48; size=4.0M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3; type=bam; md5sum=f492340b01f4ac5ccb4382ebc380853d; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep3; type=bai; md5sum=62d069ce47be62666b4d96627cac07a9; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4; type=bam; md5sum=d610e44942f334acf5416d314301f44e; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapAlnRep4; type=bai; md5sum=b429c4c861bdd0c2dc389bf06ba2ab60; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapContigs; type=bedRnaElements; md5sum=6eeda669573796801965dac043961e2a; size=5.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6977; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=003673f6a9c9ec4643b918290f03bd73; size=6.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4597; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ba6c94c412e48685462aa3de2220ea55; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b58e381ecdf68e6b600406761b9f7edd; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3ca0d75c2ae1750a4a87274c03fa92d2; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=a9991890ccd58eaceee2067bf5d5ee5b; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c6df1b262ab2c7dcad6e7128381eeaec; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7a181dcaffec4762b3f39a12d5bfc3cd; size=776K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7491; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labProtocolId=027C+,028C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6a4f9cd1f18154e027fab1ec284394f6; size=750K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4597; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=8953b93d6ee4d86ee73706d3400fff4b; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapJunctions; type=bedRnaElements; md5sum=cb6fc475e409ff5e2fb3276edf49151e; size=8.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep3; type=bigWig; md5sum=ef567791e68b9d8640bdbae36a54cff4; size=192M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapMinusRawSigRep4; type=bigWig; md5sum=dfb161ab8a4b3fd2d57a46867d467297; size=214M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-30; dateUnrestricted=2011-06-30; subId=2415; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep3; type=bigWig; md5sum=5da4cdaf79d1b7885e8090e3bb9f60e3; size=196M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2416; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapPlusRawSigRep4; type=bigWig; md5sum=e54c60e7e94ee9d8b03a4a97e0cf00a3; size=218M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=fb234e279b2e98c7928ee8a4c501ec5a; size=565K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=17b5e63eb98256dc9db49798a90fc0bb; size=560K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4214; geoSampleAccession=GSM765400; labExpId=LID8795; bioRep=027C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=37f99607707db4b8db9c76d7446ed23e; size=119M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4247; geoSampleAccession=GSM765400; labExpId=LID8796; bioRep=028C; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=6c8107ee1d74f051f4742b52871f55d7; size=63M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3653; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c24d66dd78d9bfbe13f1e578012e40c1; size=12M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7491; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labProtocolId=027C+,028C+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a2ce5efe4a0a3e54d62eb25b0ba21907; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000166; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4597; geoSampleAccession=GSM765400; labExpId=LID8795,LID8796; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekCytosolPapTranscriptGencV7; type=gtf; md5sum=e49f5b127b06087b9ce4ab6cbde17a6f; size=4.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3; type=bam; md5sum=02099f50cf7b7c8937be7b0642e7baac; size=9.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep3; type=bai; md5sum=ba4116e234aecfdc7012487ff4dbcda7; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4; type=bam; md5sum=ba7e1230ab689959495443a9bedb560e; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaAlnRep4; type=bai; md5sum=f22059c8c7c17156a650537dd4a0dc1f; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b87d8f30a45cf23be49f405be8f5b9c6; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1f23451b28e874062d62a2f7d3b13c75; size=4.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=2e9189c8b4a4740898405c18e1fc3266; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=b6ed7bb9dad3890229f1718a459ecd1b; size=4.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep3; type=bigWig; md5sum=8bc634f1572597eaa1a9b14b1cb58857; size=204M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaMinusRawSigRep4; type=bigWig; md5sum=6327cf82fed3808907b82d0f9ed1626a; size=163M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-11; subId=3231; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep3; type=bigWig; md5sum=18cac1e3d895661fcf1c9e978fc7777e; size=214M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3148; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusLongnonpolyaPlusRawSigRep4; type=bigWig; md5sum=8f91402f3c1a20eb4f5636346f5d3f42; size=170M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPamContigs; type=bedRnaElements; md5sum=d0031f6f30f783e0c696ff5dfeb8ade1; size=15M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6956; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=53a86b7402d5317962d137abce5def29; size=11M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4566; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=7480fe701f9aacd286fdbdb44caff68f; size=18M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a6d4fd3e078626c0cc0ddfa3d3619554; size=4.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7461; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labProtocolId=027N-,028N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=6076d5ef2b137654fc01705cb4968512; size=5.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4566; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=197bb29518d2d9dd4d113a180a37d854; size=2.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPamJunctions; type=bedRnaElements; md5sum=4fc6486e82896587d372b5acfe581c40; size=5.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=cdf054bfe5838ea05a3498581ebc5039; size=425K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=a3801fd4f78a0df84824d8eaa808c4c6; size=427K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4274; geoSampleAccession=GSM767846; labExpId=LID9204; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=565712721f8376aabd8b2245b11e4127; size=294M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4267; geoSampleAccession=GSM767846; labExpId=LID9205; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8e516ee288224343eeb8c5809b9659b0; size=219M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3654; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=261437999fa506ec487569ca6714a734; size=20M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7461; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labProtocolId=027N-,028N-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=901c20627f445e40afeec1a4f30f16a9; size=5.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000196; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4566; geoSampleAccession=GSM767846; labExpId=LID9204,LID9205; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPamTranscriptGencV7; type=gtf; md5sum=5416a3d3b554eafc47ac11e792d26bda; size=4.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3; type=bam; md5sum=9a84331b37acc0c36a664d5ce8ac865c; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep3; type=bai; md5sum=eafb48e28b0190f25ef83c0e2cb014d3; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4053; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4; type=bam; md5sum=6cafcb02a85fd372172269decf0136b9; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; sex=U; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4053; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapAlnRep4; type=bai; md5sum=2794f7213c79fd45a25d60754a61b61d; size=7.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapContigs; type=bedRnaElements; md5sum=0bb148a3d277216ff8dc0cdd53069999; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7000; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=0746d91e50c74f40b17244ce0b941d56; size=7.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4569; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=9c4a2a62385eeb7ecfe22a4a20bf026f; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=fcab47b8b7e1259e9b2809973d3da765; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=66102a6e8aacf47f6deabd2aadd81101; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=74fadbe4941b78aa0b3e75f57825ab99; size=7.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=58838645f7145a891bc3ba92b613bb30; size=8.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c5582acc641d2bfeabab79a235f49b5c; size=2.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7464; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labProtocolId=027N+,028N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=df46f1698213cbb9e755379125621d34; size=2.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4569; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4f8f991a62deb7294eac13e69c3b9edb; size=2.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapJunctions; type=bedRnaElements; md5sum=bda71cb811aeb532fc20701d68511c7b; size=11M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep3; type=bigWig; md5sum=df22bd36f38590b66916f04ed31528ee; size=851M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapMinusRawSigRep4; type=bigWig; md5sum=4fa8f4703d96d1233bdda4c803880b2d; size=937M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2417; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep3; type=bigWig; md5sum=35c07d42ca0a70f76150c885e8e0d007; size=885M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2468; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapPlusRawSigRep4; type=bigWig; md5sum=afcdd9e0d93a86157171b8422199435d; size=973M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=3f940d6c800429698213393a801e5594; size=565K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=db70f053d5bcd83ff9c85d9940cefb40; size=560K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4237; geoSampleAccession=GSM765399; labExpId=LID8797; bioRep=027N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=e554b7c3374606f3fb72c418dbbee1e6; size=53M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4218; geoSampleAccession=GSM765399; labExpId=LID8798; bioRep=028N; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=5fc261f23650798f2c264e8102719212; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3655; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=207ee2d2f8421cf865774cdac6422380; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; donorId=4F1155J; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2012-07-19; dateUnrestricted=2013-04-19; subId=7464; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labProtocolId=027N+,028N+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=c78d7f4892ace7111e0d9831a78664fd; size=2.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000165; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4569; geoSampleAccession=GSM765399; labExpId=LID8797,LID8798; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhekNucleusPapTranscriptGencV7; type=gtf; md5sum=1b3a0db20f9e9209b25b7f7141598eef; size=5.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2; type=bam; md5sum=3f6b82285789827c79f7c96df33672e6; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalAlnRep2; type=bai; md5sum=8bfb2fd9afff17550ffa96001b0ae03c; size=8.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=8c0bb914d8ba16ff131e188b20ed31e8; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=48c5153e45a2de5e3707083db66b90d2; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalMinusRep2; type=bigWig; md5sum=1bcbf99166f12d908ea3c9832c433986; size=212M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalPlusRep2; type=bigWig; md5sum=430b23de53573016e8d4fdcf6d6a133b; size=217M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm250713022CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5877; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=e27c64e34a0bd5623f58b19c09661ffc; size=267M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1; type=bam; md5sum=c40284c2037c2f1737992bee8e7c33e4; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalAlnRep1; type=bai; md5sum=eea3bccb08798ace9ed3496bba7722fd; size=8.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c74c18204a5d2a0b10e93608b197fc56; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=cdf30bdc12c25ac6cd712defe62540e0; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalMinusRep1; type=bigWig; md5sum=ae9ab79078653dae2db451bfd58225fd; size=182M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalPlusRep1; type=bigWig; md5sum=5fd9bca9af039156eacae61f4a88acf6; size=186M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm26022001CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=0b25371724fdd2fd0eba27b948f98f5a; size=207M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6015; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm2CellTotalContigs; type=bedRnaElements; md5sum=e9b6bb05e3e5df41a20cec642f47e66d; size=32M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6984; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=291e07073fd8ca654f0ccb2cab1a9602; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6361; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=dfc01b15908bf056f7d2272bf32905b9; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7401; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=988762065c0a6b95cee7f9127bca798f; size=5.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6361; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=7eedc461f5e4ba88c91eb18fad48ce41; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6047; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm2CellTotalJunctions; type=bedRnaElements; md5sum=96910bedc16875d58d9a43bfbd5cd4d8; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=6022001; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6870; geoSampleAccession=GSM984616; labExpId=LID47256; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=9cdddf098b5ff6673619d26e29f18cc6; size=223K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6901; geoSampleAccession=GSM984616; labExpId=LID47257; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=477b792b3a6d4bab0b8477312f0a936a; size=297K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7401; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=f2e2e93d1107884220a2d91e02105028; size=6.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemfm2CellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=NHEM.f_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002686; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6361; geoSampleAccession=GSM984616; labExpId=LID47256,LID47257; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemfm2CellTotalTranscriptGencV10; type=gtf; md5sum=1f5498dcb31b30cbc8138602e7bdf059; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2; type=bam; md5sum=966431ed3c3168bc63042e663d37c28c; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalAlnRep2; type=bai; md5sum=d22dcd0bdb827b1e04610950bced6c77; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm270110012CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=1836847e906687a72b88caa42688a03c; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm270110012CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=61ce9c39490601f450c3a7d132b7f263; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm270110012CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalMinusRep2; type=bigWig; md5sum=e7d753329e6a29f7e216782e32fead53; size=166M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm270110012CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm270110012CellTotalPlusRep2; type=bigWig; md5sum=6e040aaa6227e26edb77634489115fe2; size=170M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm270110012CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=9882b7aa06df6e7718b5f48946dfaf93; size=327M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1; type=bam; md5sum=f8427e2972fa56e11789f870f3a67e01; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalAlnRep1; type=bai; md5sum=b66fe942105c3e53f5b8230a9d8829e2; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm27012303CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=533be35dd4c7824e20d7d779bf8ddc9c; size=9.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm27012303CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=d89bf7f4048c168023407f283900557c; size=9.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm27012303CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalMinusRep1; type=bigWig; md5sum=576da37fcd87150aad2b0a5295f54ab2; size=223M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm27012303CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm27012303CellTotalPlusRep1; type=bigWig; md5sum=5b50db19ca2b11c1d7c5bc226be8a64c; size=228M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm27012303CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-02-27; dateUnrestricted=2012-11-27; subId=5863; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ef31738a77733b1c68d36b46589008a6; size=289M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6032; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm2CellTotalContigs; type=bedRnaElements; md5sum=acb92165efc30f0c1dfaa7efd1288bdd; size=33M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7002; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=a02ed17ac00e0f01c4e7b4eeb5e8c469; size=18M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6379; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=ecb20cb5c50467883f8c28c6ab3549c7; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7418; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=1a8f73c87233d889cab778bf4095d499; size=5.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6379; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=a0a22562917cea83ac99f3792805e824; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6051; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm2CellTotalJunctions; type=bedRnaElements; md5sum=2e96eba2e03a6f07bd2f2900fc50dcd0; size=9.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=7012303; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6887; geoSampleAccession=GSM984617; labExpId=LID47258; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=6522d31822ae8984fa64b7261f588771; size=294K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6882; geoSampleAccession=GSM984617; labExpId=LID47259; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=a63b380c60193c26f8b682078d4d0e84; size=295K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7418; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=0deee3a32f7cc8d72b532e7ee7701e4d; size=6.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhemm2CellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=NHEM_M2; localization=cell; rnaExtract=total; readType=2x101D; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002687; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6379; geoSampleAccession=GSM984617; labExpId=LID47258,LID47259; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqNhemm2CellTotalTranscriptGencV10; type=gtf; md5sum=d5c1ef778f8e9f2fe30f09becc2d6db6; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1; type=bam; md5sum=aba5a8b521e3e06534c92226b2c9c254; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep1; type=bai; md5sum=583ae0e3b4bd355ecf84e8d70cc5308f; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2; type=bam; md5sum=97687668c8dff5f0b71e7a1bc34e5875; size=5.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaAlnRep2; type=bai; md5sum=f65ce0c7f6f8031389c399d430cf003a; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=1ad02931265325b6f5489ffb8eadb133; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=ac0423716bfa28414b42354788e83908; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=91b60a1a1dc6b330c45dfc73c9937485; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=154b5ea5ed332ce7051b162170af003f; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=17f60d379e793b8fe79967446e4b5a8b; size=103M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=858e232c2e4c9cf48dd07c73c4e74e9d; size=104M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2557; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=c1ff2b8ea3ead99adfabd7985e001149; size=106M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2010-10-22; dateUnrestricted=2011-07-22; subId=2554; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=af04853f2c18d1701c106c0246b6b23d; size=107M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPamContigs; type=bedRnaElements; md5sum=6f5423907015f4129ac13139503e12a2; size=4.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6961; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=c094f3b2268c146cf27441a0fecd025d; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4573; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6971bc8cd25c70c7924069fd8dd26027; size=17M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3ac6f8262bd56d6f5359bdcfd40879a1; size=357K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7467; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labProtocolId=033WC-,034WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=2d7806f6a5330fe8989cda9da54fe8af; size=664K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4573; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=440cd10b30b5eebf3926822d7ecdb561; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPamJunctions; type=bedRnaElements; md5sum=e5a64b6fe5554d1dfd3e25e5e45ebd70; size=3.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=8af3152f79ffe67a19ab956a7459d95a; size=430K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=bb58110fc2c3e94708c2772447fe3668; size=436K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4281; geoSampleAccession=GSM765389; labExpId=LID8828; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=176bd728ba40fdad6a57277b28bc8920; size=971M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4275; geoSampleAccession=GSM765389; labExpId=LID8829; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=cfaa1c9b6890932f69a883780f0dc5b5; size=898M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3660; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d2721ea47d5028724f986a001897d0e6; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7467; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labProtocolId=033WC-,034WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=a9d946735dc350b6afa1c86d98b5d544; size=849K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHLF; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000178; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4573; geoSampleAccession=GSM765389; labExpId=LID8828,LID8829; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPamTranscriptGencV7; type=gtf; md5sum=cf1a91b73707d8a7874e541baaee2863; size=4.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4052; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1; type=bam; md5sum=a451ea7f75cafe3427c678d9d3c5b285; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4052; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep1; type=bai; md5sum=28bf61a235ed513c11823020b39fcb4c; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4054; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2; type=bam; md5sum=924e6c1e031556fa12953ca0c6084df2; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-05-06; dateUnrestricted=2012-02-06; subId=4054; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapAlnRep2; type=bai; md5sum=eab5b0907c424c578932fb4d6771146b; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapContigs; type=bedRnaElements; md5sum=9b52b4082fb40ca137c3da6d7a197ab1; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6987; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=078e185047b38032c82efa75fd50cfe1; size=6.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4543; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=d37fc9e7e4badd931c92167615bda2e2; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=3cb0cb139b4884f386202cf15057825f; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=53ba9be9c2b28642221abcc5d199dfa0; size=9.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=247d16414b244019f2e043740cc8527e; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=52cf67764719cf1d93abbd3e412adaa6; size=9.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=de45069a8047f802f00cb8a04ff80243; size=905K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7437; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labProtocolId=033WC+,034WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=cf9a7cbb3f850f060419a509e95fa17b; size=882K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4543; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=3920435cb7a9d4f4f0d13807c44e849c; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapJunctions; type=bedRnaElements; md5sum=ef107f3adcb282f7f9fac9181e4d7ac4; size=8.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep1; type=bigWig; md5sum=73f4e98406eccf7317918c01089d486d; size=400M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapMinusRawSigRep2; type=bigWig; md5sum=766d84675266cef1b7009bcf33b13dde; size=443M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2469; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep1; type=bigWig; md5sum=2ce194cf03e060024627c950c67ca6da; size=411M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2470; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapPlusRawSigRep2; type=bigWig; md5sum=89b8d0a01eaaea43df2a51d2a236f64a; size=455M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=2864ed21ea3c89841b37c0a0df2bc256; size=579K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=ce8ac78c4215bdd8a46fb2aea9c1921b; size=612K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4278; geoSampleAccession=GSM765394; labExpId=LID8692; bioRep=033WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=a8cd0e0294f3bb0ef5671b7365d81f27; size=117M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4266; geoSampleAccession=GSM765394; labExpId=LID8701; bioRep=034WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=d93dd557bd18ecd6f6f33811e919783b; size=184M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3661; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=5b64cb3669031465a04d523a00aa4113; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7437; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labProtocolId=033WC+,034WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=2eccb8ccd4619f8efdc6c7b077343d03; size=1.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=NHLF; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000168; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4543; geoSampleAccession=GSM765394; labExpId=LID8692,LID8701; bioRep=033WC,034WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqNhlfCellPapTranscriptGencV7; type=gtf; md5sum=c375b99857b4b7f36b09b29104008110; size=5.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2; type=bam; md5sum=eef8f32de92f77db4270532f54346f56; size=25G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalAlnRep2; type=bai; md5sum=4c97886435f59df657b0165c12497d9a; size=8.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc812190217CellTotalFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=fc5bd142db83d76685d2b34d9b84c873; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc812190217CellTotalFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=a88bb8c3eaa3ed322e4c71b5ff4e570a; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc812190217CellTotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalMinusRep2; type=bigWig; md5sum=c48e14eddde9e9e82e7ede983a9cfcc0; size=116M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc812190217CellTotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc812190217CellTotalPlusRep2; type=bigWig; md5sum=90cdf04d2ebe7b914aa9198c22e1a145; size=117M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc812190217CellTotalSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-26; dateUnrestricted=2012-11-26; subId=5887; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=ace9bbc46b765c0bb52fe4a3c2927151; size=286M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1; type=bam; md5sum=eb92e112288d1653c76fb63387e3fb99; size=28G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalAlnRep1; type=bai; md5sum=3b186e9fc3aac20500bc8542e409be88; size=9.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc9011302CellTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=c3176ed0aeb17ff10a85501e8b137ace; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc9011302CellTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=fastq; md5sum=b87f41fab4fcf2c990c23f3cde4ec4bd; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc9011302CellTotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalMinusRep1; type=bigWig; md5sum=8df4ffa0687933ff26f31ecf4398cd40; size=183M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc9011302CellTotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmc9011302CellTotalPlusRep1; type=bigWig; md5sum=1e953bb4d69d455b2de37501fba7ad0f; size=140M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmc9011302CellTotalSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-02-24; dateUnrestricted=2012-11-24; subId=5864; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=spikeins; md5sum=d0cee653788f0c342697785d7e530d7f; size=257M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6024; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmcCellTotalContigs; type=bedRnaElements; md5sum=0120de5850b5d5996fc822d311d25ef7; size=34M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6937; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=f8e664340b359b3857d7289c216aa87d; size=23M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6370; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=53aa410e54a675b3d2f3e0473cfddcee; size=20M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7408; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gff; md5sum=08c4935c1c5d649ddfbd4db439bb057b; size=9.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6370; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=60ead7c3b19481c71bcffbe1ab956fc0; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-16; dateUnrestricted=2012-12-16; subId=6062; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmcCellTotalJunctions; type=bedRnaElements; md5sum=c2c13a082508532b3057ed36d6bd9fae; size=12M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=1; donorId=9011302; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6888; geoSampleAccession=GSM984615; labExpId=LID47245; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=b5c0174162ff1b525b2b87db55b0857c; size=297K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; replicate=2; donorId=8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-04-27; dateUnrestricted=2013-01-27; subId=6908; geoSampleAccession=GSM984615; labExpId=LID47246; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=pdf; md5sum=178f9446ee008206a28d8849f1783064; size=296K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7408; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; type=gtf; md5sum=e3cc1d7ba6371662e2a62bf234d6d392; size=10M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSkmcCellTotalTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SkMC; localization=cell; rnaExtract=total; readType=2x101D; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002678; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6370; geoSampleAccession=GSM984615; labExpId=LID47245,LID47246; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; tableName=wgEncodeCshlLongRnaSeqSkmcCellTotalTranscriptGencV10; type=gtf; md5sum=aa591a601a22671cfd1460c1ea51261a; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3; type=bam; md5sum=659e858b34d7a71e6c2258a9ef313320; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep3; type=bai; md5sum=066992e491ecfd2cb72348dd76fb574e; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4; type=bam; md5sum=7e1af1b62f25769d06f86d5a8e60b777; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapAlnRep4; type=bai; md5sum=98a721411bc4a3d908e2dcb7f514d2d4; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6017; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapContigs; type=bedRnaElements; md5sum=22a398338acc8e71f11a1fbaceb23ac5; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=e5a09e06eab4c8587b98c5a793639c53; dateUnrestricted=2013-03-02; size=16M; dccAccession=wgEncodeEH002632; replicate=3,4; view=ExonsDeNovo; labExpId=LID46598,LID46599; subId=6973; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981253; bioRep=085WC,086WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6363; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=6bec5f73c780a60db1d2585d7c70b599; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=3ac750d2ebdb7b5e13d9f823283c0cb7; size=9.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=f35f3523ded2b3dc0e8fc798b9dc476c; size=6.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=eecfc792365a02ede95533052ce2a867; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=4a71dafa1d07686b749064e99b008fce; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=085WC+,086WC+; md5sum=21e2e935eb8cd927aad9ae392cbd107a; dateUnrestricted=2013-04-16; size=1.5M; dccAccession=wgEncodeEH002632; replicate=3,4; view=GeneDeNovo; labExpId=LID46598,LID46599; subId=7430; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981253; bioRep=085WC,086WC; lab=CSHL; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6363; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=6fee7fcdda4716a2b3d56ab51aeb25a1; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6053; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapJunctions; type=bedRnaElements; md5sum=832f4ca83da9f9de535d070c5cd490f5; size=14M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapMinusRep3; type=bigWig; md5sum=4cbc334a22f012bc0f5c3e9fb8f0217a; size=151M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapMinusRep4; type=bigWig; md5sum=3fa778c9e3456fcc91eb0c1620d00af4; size=150M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapPlusRep3; type=bigWig; md5sum=2d8580c4e340ce92a501b400a849a148; size=154M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapPlusRep4; type=bigWig; md5sum=5d2329e0f91d5dd0f23c3f32631f15a3; size=153M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6897; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=7e88e5f753d09cf2369623869bc995dc; size=452K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6885; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=70b8fc4d0ab8560e1dfacff408669b82; size=459K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5787; geoSampleAccession=GSM981253; labExpId=LID46598; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=7579063d8089b4f7c19e3e2ae79c837e; size=551M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5775; geoSampleAccession=GSM981253; labExpId=LID46599; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=ba6931295548a1c0085752b33cf78a6e; size=306M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=085WC+,086WC+; md5sum=fe572fb35bd18a1f22ad9be62a2eb70d; dateUnrestricted=2013-04-16; size=2.0M; dccAccession=wgEncodeEH002632; replicate=3,4; view=TranscriptDeNovo; labExpId=LID46598,LID46599; subId=7430; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981253; bioRep=085WC,086WC; lab=CSHL; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCellPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002632; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6363; geoSampleAccession=GSM981253; labExpId=LID46598,LID46599; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCellPapTranscriptGencV10; type=gtf; md5sum=5184fb6d8c52aebb473fda1f94ead37e; size=5.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3; type=bam; md5sum=cb0f6b9216dbddf1038dba26ccb9cdd6; size=34G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep3; type=bai; md5sum=817a4015b0ee5429014fda571309d2d4; size=9.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4; type=bam; md5sum=5053611fed33b39a913ec9e77e08aaca; size=32G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapAlnRep4; type=bai; md5sum=1cb6a432c7b6e8a7c9ea27191196c3f0; size=9.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6031; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapContigs; type=bedRnaElements; md5sum=5a87c5acfc47757ba6fcc59f23dfe2d3; size=15M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=7001; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=631a1d0a5d531747fd01fac2faded756; size=18M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6377; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=98c016ccd5e71947cac7be915f632a9d; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=e8c6af47434651db83376459517c579e; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=57d5b931d8977e602eb3ee3a244de077; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=0a99bce432fc26d9b20c9343e07dd0ed; size=22G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=cfd5b23cad9426ede1f80803d238c611; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapGeneDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7417; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labProtocolId=085C+,086C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gff; md5sum=31d4af25e3e9d66f6b2419a7ca0ae43d; size=1.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6377; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=9145cdd5da1fd130a2d8e2b0c8bb705a; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6050; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapJunctions; type=bedRnaElements; md5sum=60ce7beecb351aea185695697ad249dd; size=18M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep3; type=bigWig; md5sum=258be741a53b7da9bf7b86063462a2a4; size=156M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapMinusRep4; type=bigWig; md5sum=381899e80396534bfc03d0e269457cf1; size=146M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep3; type=bigWig; md5sum=4a46a58fe2001bd62e39a119e6f98660; size=160M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapPlusRep4; type=bigWig; md5sum=4155bf42fc171198a178d9bc1b30e02d; size=149M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6881; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=9e038dc7eb6cea4dabb563f7b51dbd5b; size=344K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6892; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=37bd8dc137c7df6ccad0a9e1b096d6d3; size=343K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5770; geoSampleAccession=GSM981251; labExpId=LID46594; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=70b6eeaec95ac4dfa9c8a6dd1bae00ca; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5782; geoSampleAccession=GSM981251; labExpId=LID46595; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=66c25b4034ab8cc61c097eb2a2361560; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7417; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labProtocolId=085C+,086C+; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=8b5d04f04ede3d842b5ddbaaf7f62007; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshCytosolPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002630; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6377; geoSampleAccession=GSM981251; labExpId=LID46594,LID46595; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshCytosolPapTranscriptGencV10; type=gtf; md5sum=ee7c2f3d8a27b72ff95c3ef26a1fe41c; size=5.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3; type=bam; md5sum=46978634768e785865f045526fa58510; size=22G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep3; type=bai; md5sum=51bbd9aa2616364dbe195bfd9d4773fe; size=9.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4; type=bam; md5sum=16ba38ac0553b1736a4628606c173c19; size=34G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapAlnRep4; type=bai; md5sum=7e294095bf5cba54a5df64d6b5e4ea73; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6029; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapContigs; type=bedRnaElements; md5sum=5be089f5512eb00e350391389bce257c; size=33M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapExonsDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-05-30; dataVersion=ENCODE Jul 2012 Freeze; md5sum=b9af929f530de841963ffc73f942a21e; dateUnrestricted=2013-03-02; size=20M; dccAccession=wgEncodeEH002631; replicate=3,4; view=ExonsDeNovo; labExpId=LID46596,LID46597; subId=6970; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981250; bioRep=085N,086N; lab=CSHL; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6375; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=9981dbfb7ed4fb903c71a279883ed555; size=21M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=b70a34e8c098a67790029163cbaa6e3e; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=acab5815f208a10c6838657b60c75c29; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=60a7f7e31205d4e04163030439155a19; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=fastq; md5sum=c28839af3f46382a21c40a9d6d6d0f19; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapGeneDeNovo.gff.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=085N+,086N+; md5sum=8a1db8ff5ba73f1583aa246cf6458c22; dateUnrestricted=2013-04-16; size=4.8M; dccAccession=wgEncodeEH002631; replicate=3,4; view=GeneDeNovo; labExpId=LID46596,LID46597; subId=7425; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981250; bioRep=085N,086N; lab=CSHL; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapGeneGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6375; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=gtf; md5sum=8102576d717a72ce68771c61b7f516ff; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-16; dateUnrestricted=2012-05-14; subId=6076; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapJunctions; type=bedRnaElements; md5sum=d6048475e9c8853ef807da2c27428b07; size=19M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep3; type=bigWig; md5sum=62af01f7981f61fd7753f6560397356b; size=236M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapMinusRep4; type=bigWig; md5sum=242dd3d5697efad2831eeb8e3f9e60e5; size=376M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep3; type=bigWig; md5sum=9f199e486f3412daa7457d4b856d797c; size=243M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapPlusRep4; type=bigWig; md5sum=8aa3f5e950e34669c294de8ddf404643; size=388M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6903; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=2589e549931ba67a24ed436c1d21ecbf; size=342K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-04-27; dateUnrestricted=2012-05-14; subId=6878; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=pdf; md5sum=ad5d94a5f9b4a3a05d2a448d520e4e8d; size=354K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapSpikeinsRep3.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-18; dateUnrestricted=2012-05-14; subId=5790; geoSampleAccession=GSM981250; labExpId=LID46596; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=a823c860761129d6ac0a14c8f7a883f1; size=390M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapSpikeinsRep4.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-02-17; dateUnrestricted=2012-05-14; subId=5767; geoSampleAccession=GSM981250; labExpId=LID46597; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; type=spikeins; md5sum=477773b848acdb67d6fac1f29a36bb3e; size=735M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapTranscriptDeNovo.gtf.gz seqPlatform=Illumina_HiSeq_2000; composite=wgEncodeCshlLongRnaSeq; readType=2x101D; dataType=RnaSeq; project=wgEncode; dateSubmitted=2012-07-16; dataVersion=ENCODE Jul 2012 Freeze; labProtocolId=085N+,086N+; md5sum=df54dacb56d9b7a5f69209b72c93d694; dateUnrestricted=2013-04-16; size=5.5M; dccAccession=wgEncodeEH002631; replicate=3,4; view=TranscriptDeNovo; labExpId=LID46596,LID46597; subId=7425; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; geoSampleAccession=GSM981250; bioRep=085N,086N; lab=CSHL; type=gtf; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshNucleusPapTranscriptGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x101D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002631; dateSubmitted=2012-03-27; dateUnrestricted=2012-05-14; subId=6375; geoSampleAccession=GSM981250; labExpId=LID46596,LID46597; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshNucleusPapTranscriptGencV10; type=gtf; md5sum=073b24e9a6ac7d267519ffb197481b33; size=5.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1; type=bam; md5sum=afc08c3ec34d3d2c7213993e8193adb0; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep1; type=bai; md5sum=dfda9179413094075eaa5d1a4e8c3436; size=6.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2; type=bam; md5sum=47dfec59d79373401f31dbd2397f3edc; size=9.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaAlnRep2; type=bai; md5sum=c24b917e287d2a651b5d2928a8aee2ae; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=7e3f42d6e9eb19e7f73767b43d57ea99; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=6fb90b0765671fd5fa68f40fc25c9379; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=349a1beace4244082274ed731b82070c; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=e411339277d4fa62665c20964f33b1d4; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep1; type=bigWig; md5sum=4bfb0cc95929ca35156a9f3747f89c99; size=219M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaMinusRawSigRep2; type=bigWig; md5sum=e9f2d1edbdcfae981fd98d9a528e6c37; size=219M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3149; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep1; type=bigWig; md5sum=848a8afab8d0f3029d0a6501575d9ade; size=223M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2010-12-24; dateUnrestricted=2011-09-23; subId=3151; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellLongnonpolyaPlusRawSigRep2; type=bigWig; md5sum=a7e343350ce3a309e44dd351b8555e23; size=223M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPamContigs; type=bedRnaElements; md5sum=d7f55b52e877226cab531a1ea052c46d; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6949; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=7604f09dabc4b7fe490fe5167dc5a3fa; size=13M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4561; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b4fd1bf4b8b09f218df07f5379cc64c5; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=6a9ee2477dd1c3808767688853f42396; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7455; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labProtocolId=019WC-,020WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=e1b341d0546c59433031f1c6220960cc; size=7.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4561; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bbb33b03d2c919da3c1d503de0bdc68a; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPamJunctions; type=bedRnaElements; md5sum=4b91516304a1d65fe97fb87cdd74d47b; size=5.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamProtocolRep1.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=f88ffbcc91f64a0f1114f1fae23114e8; size=355K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamProtocolRep2.pdf project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=89d93b6869b6255cdc4115e58774604c; size=357K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4252; geoSampleAccession=GSM767845; labExpId=LID9003; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=8fa8d1d482a56a8939884ccb6969141b; size=598M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4202; geoSampleAccession=GSM767845; labExpId=LID9011; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=960479de28cd99105f529813e1c2bc6d; size=814M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3662; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bee65a7ef22acefd699375dd75160e07; size=24M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7455; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labProtocolId=019WC-,020WC-; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=236350429b6b3fabece6492738807f15; size=8.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longNonPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000197; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4561; geoSampleAccession=GSM767845; labExpId=LID9003,LID9011; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPamTranscriptGencV7; type=gtf; md5sum=c99e0678dd75482ca8cb29d575347a0e; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1; type=bam; md5sum=0d70a10ae21a37efca8da0cb8f2214eb; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep1; type=bai; md5sum=3ea1a45855a75f20b2d58e5bae908845; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2; type=bam; md5sum=cb43a492248399d48b68011bcffafa23; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapAlnRep2; type=bai; md5sum=c72e29a304733c67a5bad8acdefe25f0; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapContigs; type=bedRnaElements; md5sum=047ea6a69d7b03dbbfbc080f7ca7775c; size=16M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapExonsDeNovo.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2012-05-30; dateUnrestricted=2013-03-02; subId=6950; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=db5b043f8f425ebf8f22d62735e22617; size=7.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4560; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=99e08ba11dbf2a6ca7e6a328e3da1c43; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=c198fe98456dd83f6fb399abfd16ae8a; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd1; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=9d32da420fdebfbc1a8cedf37799ee8d; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=804ba3c53d6bd04031329ee9690a3a2c; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=FastqRd2; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=fastq; md5sum=8b102240e3d5d94de294c410c7210b62; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapGeneDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=b2bce60357dca9a286371580150acc1a; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapGeneDeNovoV2.gff.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7454; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labProtocolId=019WC+,020WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gff; md5sum=b1119a031041ba214bdc10214d031e72; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapGeneGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=GeneGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4560; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=4abe046dc78b3b988ee949ab1628de17; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapJunctions.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Junctions; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapJunctions; type=bedRnaElements; md5sum=e31850dce05aed1b9c5af119324301d2; size=11M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep1; type=bigWig; md5sum=250059784d71c423b9e6fa01f864b192; size=913M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapMinusRawSigRep2; type=bigWig; md5sum=f55bd95896ae0058f7bcc00fcf0770c6; size=825M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2341; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep1; type=bigWig; md5sum=753de84bc84697c4ba819a206455186f; size=938M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2010-09-29; dateUnrestricted=2011-06-29; subId=2418; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapPlusRawSigRep2; type=bigWig; md5sum=fdf1664d0e554bee241e27846d685573; size=848M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=b2f6c9a11df513a66de35fc98c6b7087; size=644K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-04-20; dateUnrestricted=2012-01-20; subId=3259; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=pdf; md5sum=72efdf9fd92abfb3d5027ebf3f01c110; size=641K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapSpikeinsRep1.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4282; geoSampleAccession=GSM765395; labExpId=LID8967; bioRep=019WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=90c0448aacae8141cbe9c2ab10e4e7b2; size=163M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapSpikeinsRep2.spikeins project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=Spikeins; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-06-08; dateUnrestricted=2012-03-08; subId=4232; geoSampleAccession=GSM765395; labExpId=LID8968; bioRep=020WC; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=spikeins; md5sum=2e0aec43443d57a6388c36176344a756; size=163M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptDeNovo.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-02-18; dateUnrestricted=2011-11-18; subId=3663; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=ea8c3da2eef928536ad9fab4101a4215; size=19M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptDeNovoV2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptDeNovo; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; submittedDataVersion=V2 - New version of processing used.; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2012-07-16; dateUnrestricted=2013-04-16; subId=7454; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labProtocolId=019WC+,020WC+; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; type=gtf; md5sum=bcf4f9757bba4d4cbb9a19e72d38f75a; size=2.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlLongRnaSeq/releaseLatest/wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; view=TranscriptGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; readType=2x76D; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000169; dateSubmitted=2011-07-13; dateUnrestricted=2012-04-13; subId=4560; geoSampleAccession=GSM765395; labExpId=LID8967,LID8968; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; tableName=wgEncodeCshlLongRnaSeqSknshraCellPapTranscriptGencV7; type=gtf; md5sum=d7d81dfe138e77b9b0b87b7575688391; size=5.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6491; geoSampleAccession=GSM973674; labExpId=LID46098,LID46099; bioRep=087WC,088WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellCiptapContigs; type=bedRnaElements; md5sum=f5a643365f472c5beaef969f41b118ee; size=1.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6748; geoSampleAccession=GSM973674; labExpId=LID46098,LID46099; bioRep=087WC,088WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=22f787674097f4fb9a97464011e44555; size=919K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellCiptapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7242; geoSampleAccession=GSM973674; labExpId=LID46098; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=de8f2fc2a19529a1118b0a353846c2e5; size=480K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellCiptapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7230; geoSampleAccession=GSM973674; labExpId=LID46099; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=78cc585caec01df9c4176fa2d6af80ea; size=475K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6497; geoSampleAccession=GSM973668; labExpId=LID46058,LID46059; bioRep=087WC,088WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellContigs; type=bedRnaElements; md5sum=23ca83dd9b5ee21d59a680da5c4b2dec; size=362K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6755; geoSampleAccession=GSM973668; labExpId=LID46058,LID46059; bioRep=087WC,088WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=f6fbb2fdadda66bf7ce3359e6a4a957c; size=880K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7226; geoSampleAccession=GSM973668; labExpId=LID46058; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=4a90e6b0c09a07ceb0e15f1e7ff0f0a9; size=462K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7254; geoSampleAccession=GSM973668; labExpId=LID46059; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=514dc5805062a403d9cec788d999be02; size=459K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5813; labExpId=LID46058; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep3; type=bam; md5sum=bd1298d1be868f2050b932234f5f04fb; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5813; labExpId=LID46058; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep3; type=bai; md5sum=490e210b64a5066e6dcdb5ec8c4be6dc; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5846; labExpId=LID46059; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep4; type=bam; md5sum=6e3ac61d3e2e01b03e34f26f70b46769; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5846; labExpId=LID46059; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalAlnRep4; type=bai; md5sum=8bd3a2df396e4e94c5e1543dd972ff74; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5831; labExpId=LID46098; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep3; type=bam; md5sum=0015163599936ca37dcfa194d1113f9a; size=9.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5831; labExpId=LID46098; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep3; type=bai; md5sum=410e10b0125b730ff239c660a3d99208; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5818; labExpId=LID46099; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep4; type=bam; md5sum=1c22cb6b373b7240be911e5d897dc145; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5818; labExpId=LID46099; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapAlnRep4; type=bai; md5sum=f36db777ba425801597ff5e25cf61a19; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5831; geoSampleAccession=GSM973674; labExpId=LID46098; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapMinusRep3; type=bigWig; md5sum=8ce552841adfd3dae12fa9ea846eda41; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5818; geoSampleAccession=GSM973674; labExpId=LID46099; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapMinusRep4; type=bigWig; md5sum=e143beecab57333d37513334ae14baa8; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5831; geoSampleAccession=GSM973674; labExpId=LID46098; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapPlusRep3; type=bigWig; md5sum=a05476cbf1022ffb1bc5a3793dffe750; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5818; geoSampleAccession=GSM973674; labExpId=LID46099; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapPlusRep4; type=bigWig; md5sum=d2cdaf277105e6040c15c72bc69541ff; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5831; geoSampleAccession=GSM973674; labExpId=LID46098; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a34f0785b527d108ce7ddf0111224ec1; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalCiptapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002601; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5818; geoSampleAccession=GSM973674; labExpId=LID46099; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d86a70c50c58bd4f122f8045179a091c; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5813; geoSampleAccession=GSM973668; labExpId=LID46058; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalMinusRep3; type=bigWig; md5sum=410a594da39f4afdc98d46fa4fe4cc44; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5846; geoSampleAccession=GSM973668; labExpId=LID46059; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalMinusRep4; type=bigWig; md5sum=280be0b18e286ff335288f927181ff52; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5813; geoSampleAccession=GSM973668; labExpId=LID46058; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalPlusRep3; type=bigWig; md5sum=b13d4ab35b82b895ea064c98c6d51d70; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5846; geoSampleAccession=GSM973668; labExpId=LID46059; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalPlusRep4; type=bigWig; md5sum=5957e670554652875b28fcf214f4e131; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5813; geoSampleAccession=GSM973668; labExpId=LID46058; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=816b313b8bf9f9aa65a5992fc4bdf6f8; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002598; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5846; geoSampleAccession=GSM973668; labExpId=LID46059; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=052cd821d188364bf0c2d93b4a1b42d1; size=5.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep1V2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5925; labExpId=LID47039; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep1V2; type=bam; md5sum=5abd4ef1a96b07369de5f37912028fac; size=5.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep1V2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5925; labExpId=LID47039; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep1V2; type=bai; md5sum=4eb781249cba36a1cd23ef9ae6d8404c; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep2V2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5919; labExpId=LID47040; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep2V2; type=bam; md5sum=f5b566f253e1e5a0b58e000c8cc707c3; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep2V2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5919; labExpId=LID47040; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapAlnRep2V2; type=bai; md5sum=0a73fe8e7ac3f8ea8ba9097d43904b19; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapMinusRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5925; geoSampleAccession=GSM897083; labExpId=LID47039; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapMinusRep1V2; type=bigWig; md5sum=e933875929f9401f964093b46f032505; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapMinusRep2V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5919; geoSampleAccession=GSM897083; labExpId=LID47040; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapMinusRep2V2; type=bigWig; md5sum=5ef5826105c69b997bcd20e2c4c85e04; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapPlusRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5925; geoSampleAccession=GSM897083; labExpId=LID47039; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapPlusRep1V2; type=bigWig; md5sum=c42b776d26985b9ba5c21e89e46624e8; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapPlusRep2V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5919; geoSampleAccession=GSM897083; labExpId=LID47040; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellShorttotalTapPlusRep2V2; type=bigWig; md5sum=bf44c47375039462351efba8e0bf3a78; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapProtocolRep1V2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-14; dateUnrestricted=2012-02-11; subId=5638; geoSampleAccession=GSM897083; labExpId=LID47039; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=13ea5b58b2fbc3e283d0015296ba465d; size=139K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapProtocolRep2V2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-14; dateUnrestricted=2012-02-11; subId=5632; geoSampleAccession=GSM897083; labExpId=LID47040; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=fb6d15f288b4f942611fac4723901526; size=139K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapRawDataRep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5925; geoSampleAccession=GSM897083; labExpId=LID47039; bioRep=087WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=3853711aa15759e77364f5d4c1f0f3ca; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellShorttotalTapRawDataRep2V2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-02-29; dateUnrestricted=2012-02-11; subId=5919; geoSampleAccession=GSM897083; labExpId=LID47040; bioRep=088WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=eade40c9be84a83e5856d56904fd2ced; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellTapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-03-28; dateUnrestricted=2012-02-11; subId=6505; geoSampleAccession=GSM897083; labExpId=LID47039,LID47040; bioRep=087WC,088WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CellTapContigsV2; type=bedRnaElements; md5sum=13d549ae45d21e2ec9710f9b955bb48f; size=630K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001740; dateSubmitted=2011-05-11; dateResubmitted=2012-03-30; dateUnrestricted=2012-02-11; subId=6763; geoSampleAccession=GSM897083; labExpId=LID47039,LID47040; bioRep=087WC,088WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=55203285c30f47c64ac69ff83ddfb497; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6842; geoSampleAccession=GSM973669; labExpId=LID46102,LID46103; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolCiptapContigs; type=bedRnaElements; md5sum=6206554accf9c28d3309de1eb3328276; size=879K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6747; geoSampleAccession=GSM973669; labExpId=LID46102,LID46103; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=f316ad4056a36bd17482f969f3ff818b; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolCiptapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7249; geoSampleAccession=GSM973669; labExpId=LID46102; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=1027db8cd582c491b872c12f1e59959e; size=458K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolCiptapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7219; geoSampleAccession=GSM973669; labExpId=LID46103; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=475f0541e97399099caa20d35e3261af; size=458K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6501; geoSampleAccession=GSM973664; labExpId=LID46062,LID46063; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolContigs; type=bedRnaElements; md5sum=6beb7874ebbe045622714f0e170f65e8; size=724K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6760; geoSampleAccession=GSM973664; labExpId=LID46062,LID46063; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=def317c302cab1a03a63e4d684394506; size=1.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7212; geoSampleAccession=GSM973664; labExpId=LID46062; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=28a28cd8fa996eea01472dee85059afa; size=439K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7233; geoSampleAccession=GSM973664; labExpId=LID46063; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=b13d0d94d71d4858c84e3f64a0246f0a; size=433K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5804; labExpId=LID46062; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep3; type=bam; md5sum=debcf40784d985b79b5be9038a1dbdee; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5804; labExpId=LID46062; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep3; type=bai; md5sum=093f682090de604e95126ace723a63e8; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5825; labExpId=LID46063; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep4; type=bam; md5sum=668de1446c6bc02b780bf5d048429bac; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5825; labExpId=LID46063; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalAlnRep4; type=bai; md5sum=00edaef0637c20c51dc96a7befb9c4c2; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5840; labExpId=LID46102; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep3; type=bam; md5sum=dae388ed964fcab80d4d5a31089b7ace; size=8.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5840; labExpId=LID46102; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep3; type=bai; md5sum=c9c278d8ceab97a396d197e204731f00; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5810; labExpId=LID46103; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep4; type=bam; md5sum=ddb0202bcfd0ec2a49e2c2d21552bf07; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5810; labExpId=LID46103; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapAlnRep4; type=bai; md5sum=8bb7da82780154de4e56640156489e1f; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5840; geoSampleAccession=GSM973669; labExpId=LID46102; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapMinusRep3; type=bigWig; md5sum=34c63aa9cbb3096325c8d9c37d67fd28; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5810; geoSampleAccession=GSM973669; labExpId=LID46103; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapMinusRep4; type=bigWig; md5sum=92e0ea7dcfb0f8fbe4fd785ff4728b66; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5840; geoSampleAccession=GSM973669; labExpId=LID46102; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapPlusRep3; type=bigWig; md5sum=89793024058320b7489a3c80505aafaa; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5810; geoSampleAccession=GSM973669; labExpId=LID46103; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapPlusRep4; type=bigWig; md5sum=72cb0ef1679e87c14364c4a24218c88b; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5840; geoSampleAccession=GSM973669; labExpId=LID46102; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5b4ff86913e836871d5ecfaffdf6dd98; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalCiptapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002599; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5810; geoSampleAccession=GSM973669; labExpId=LID46103; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0d914e9df47a3a859200d697a79b9fb8; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5804; geoSampleAccession=GSM973664; labExpId=LID46062; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalMinusRep3; type=bigWig; md5sum=a7a946ab70a182309986003c944a9b8d; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5825; geoSampleAccession=GSM973664; labExpId=LID46063; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalMinusRep4; type=bigWig; md5sum=43c7fcc5af257c1cd6689f5963632ccc; size=6.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5804; geoSampleAccession=GSM973664; labExpId=LID46062; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalPlusRep3; type=bigWig; md5sum=bd6710fea86bc43f4978197905ff4234; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5825; geoSampleAccession=GSM973664; labExpId=LID46063; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalPlusRep4; type=bigWig; md5sum=3b67b2fcf4712b9dafb18d047fa61a68; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5804; geoSampleAccession=GSM973664; labExpId=LID46062; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=918406fd4f9aafc69a9f6c05a2b06899; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002597; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5825; geoSampleAccession=GSM973664; labExpId=LID46063; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f7b6e992b0862e3225ec998f964f83cf; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5920; labExpId=LID47041; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep3; type=bam; md5sum=87d77983d90e391a03ef1b8e2b6dba84; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5920; labExpId=LID47041; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep3; type=bai; md5sum=e1018cf683ee66e10bd0000ba3f379c0; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5940; labExpId=LID47042; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep4; type=bam; md5sum=691fc9d26afc4734bfb0882c1d1ecae7; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5940; labExpId=LID47042; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapAlnRep4; type=bai; md5sum=c8b5b930ec172357b1056ca555531d00; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5920; geoSampleAccession=GSM973684; labExpId=LID47041; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapMinusRep3; type=bigWig; md5sum=5cb26126617341fab6729b33ce4cda97; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5940; geoSampleAccession=GSM973684; labExpId=LID47042; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapMinusRep4; type=bigWig; md5sum=6c45724703d267e918a1f9ffb30eae32; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5920; geoSampleAccession=GSM973684; labExpId=LID47041; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapPlusRep3; type=bigWig; md5sum=d2e94a1691e9560ebb1ec7daaec73a4e; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5940; geoSampleAccession=GSM973684; labExpId=LID47042; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapPlusRep4; type=bigWig; md5sum=99038b29c097e054030c1ef256bc1da1; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5633; geoSampleAccession=GSM973684; labExpId=LID47041; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=beb7033eb44732f1d31714f6a6bc9278; size=143K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5648; geoSampleAccession=GSM973684; labExpId=LID47042; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=e5eb39081adf7ffc0bd6919ecc670a99; size=142K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5920; geoSampleAccession=GSM973684; labExpId=LID47041; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d6f06cf5675b4ff592799b62f619ee86; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5940; geoSampleAccession=GSM973684; labExpId=LID47042; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=49cade80945847ca90fd448b56f5a5bb; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-20; subId=7109; geoSampleAccession=GSM973684; labExpId=LID47041,LID47042; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549CytosolTapContigs; type=bedRnaElements; md5sum=ee66630f2e6740ba7e9efa2a2c5afcf6; size=587K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549CytosolTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002461; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-20; subId=7111; geoSampleAccession=GSM973684; labExpId=LID47041,LID47042; bioRep=087C,088C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=120aa3d8354fda7f885d18658ef3bcba; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6853; geoSampleAccession=GSM973661; labExpId=LID46100,LID46101; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusCiptapContigs; type=bedRnaElements; md5sum=3c479ee1a4b31b92edd337d2f21b8d7b; size=772K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6773; geoSampleAccession=GSM973661; labExpId=LID46100,LID46101; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=c736b5ff899fcb805ca599b0a6039726; size=1.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusCiptapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7246; geoSampleAccession=GSM973661; labExpId=LID46100; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=86cb47cba59cb5d125976c799f57f619; size=486K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusCiptapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7244; geoSampleAccession=GSM973661; labExpId=LID46101; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=103e1842516822c30d562720e0a297bb; size=485K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6500; geoSampleAccession=GSM973683; labExpId=LID46060,LID46061; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusContigs; type=bedRnaElements; md5sum=52bde2db27d4bca1784e762afb806b7f; size=717K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6759; geoSampleAccession=GSM973683; labExpId=LID46060,LID46061; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=09deb4c14f0e5ca6ba7be1dbc8ed581d; size=1.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7238; geoSampleAccession=GSM973683; labExpId=LID46060; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=0e1b20caf3a00077fc6829c8c2e0fb58; size=507K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7208; geoSampleAccession=GSM973683; labExpId=LID46061; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=9d622ae65f477fee24bef71fa421ab9c; size=502K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5829; labExpId=LID46060; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep3; type=bam; md5sum=516ef71f683b23cec682d723b6b577ab; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5829; labExpId=LID46060; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep3; type=bai; md5sum=3bb81b54481b7049fb96965ea6e7893f; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5798; labExpId=LID46061; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep4; type=bam; md5sum=00da7abd6286d51a07f9d523a2139285; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5798; labExpId=LID46061; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalAlnRep4; type=bai; md5sum=ccdb6b9fcf5032f83a5255fb0ef915da; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5839; labExpId=LID46100; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep3; type=bam; md5sum=eb3c8923cc5006dc1288e0df63e46d71; size=4.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5839; labExpId=LID46100; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep3; type=bai; md5sum=902f55c03c3bff158a80c57c3be14ea9; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5834; labExpId=LID46101; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep4; type=bam; md5sum=00fe00cffea8a8277fd5030ccd8bea61; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5834; labExpId=LID46101; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapAlnRep4; type=bai; md5sum=96e1271efd57fa3728cb24b4434960c1; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5839; geoSampleAccession=GSM973661; labExpId=LID46100; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapMinusRep3; type=bigWig; md5sum=0f1c2d2a2aa3813d718aed0cc497cb29; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5834; geoSampleAccession=GSM973661; labExpId=LID46101; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapMinusRep4; type=bigWig; md5sum=1f008ff745f3c9a73f5451dbd5ccb2ea; size=6.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5839; geoSampleAccession=GSM973661; labExpId=LID46100; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapPlusRep3; type=bigWig; md5sum=13e4aff69a59fd6d8a354c7ee14a03eb; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5834; geoSampleAccession=GSM973661; labExpId=LID46101; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapPlusRep4; type=bigWig; md5sum=30501fd8a562c0190f93af2fd1781b50; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5839; geoSampleAccession=GSM973661; labExpId=LID46100; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f64bfbd30aa190ddb187a0d45ff7cc55; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalCiptapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002617; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5834; geoSampleAccession=GSM973661; labExpId=LID46101; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a53fc6241675ca78108409ee3fec0c48; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5829; geoSampleAccession=GSM973683; labExpId=LID46060; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalMinusRep3; type=bigWig; md5sum=50ea7bd10356aff5c247c293f64e96e3; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5798; geoSampleAccession=GSM973683; labExpId=LID46061; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalMinusRep4; type=bigWig; md5sum=b4fdc9cc9c8c5a771a78bfaf3d44a9b3; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5829; geoSampleAccession=GSM973683; labExpId=LID46060; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalPlusRep3; type=bigWig; md5sum=71f5f47dabaeab10ed71782ab43c2619; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5798; geoSampleAccession=GSM973683; labExpId=LID46061; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalPlusRep4; type=bigWig; md5sum=ba749192cec0b62ef3006fdfad0d9fd4; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5829; geoSampleAccession=GSM973683; labExpId=LID46060; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ebe4984dc91c56517c44ea542a4b8601; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002600; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-17; subId=5798; geoSampleAccession=GSM973683; labExpId=LID46061; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=37e8109f20c5dd5ce4838dead75b2f73; size=5.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5926; labExpId=LID47043; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep3; type=bam; md5sum=89d87a0c8735049c10c8c613a40dbdb1; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5926; labExpId=LID47043; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep3; type=bai; md5sum=bd620a25e9e5b360640038745f302ba2; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5930; labExpId=LID47044; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep4; type=bam; md5sum=39a352d752dc66690630b231ae687b51; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5930; labExpId=LID47044; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapAlnRep4; type=bai; md5sum=d7208167a153719b46d05398c7218b44; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5926; geoSampleAccession=GSM973685; labExpId=LID47043; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapMinusRep3; type=bigWig; md5sum=926d57961722d4e2eec54038ff3de103; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5930; geoSampleAccession=GSM973685; labExpId=LID47044; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapMinusRep4; type=bigWig; md5sum=9458758813c3a5870d35ad62400791d4; size=5.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5926; geoSampleAccession=GSM973685; labExpId=LID47043; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapPlusRep3; type=bigWig; md5sum=bf40e79044daa470a3a340c07a632faa; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5930; geoSampleAccession=GSM973685; labExpId=LID47044; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapPlusRep4; type=bigWig; md5sum=5a3965b2b50c594e02f13f0c1002535f; size=5.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5637; geoSampleAccession=GSM973685; labExpId=LID47043; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=c199c67e03c852162a99ffc4496ebb6a; size=143K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5640; geoSampleAccession=GSM973685; labExpId=LID47044; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=0d804f4df95130c8ab41596c77eda0ab; size=145K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5926; geoSampleAccession=GSM973685; labExpId=LID47043; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f415f42ae08734f35d9a9526e0f84d70; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5930; geoSampleAccession=GSM973685; labExpId=LID47044; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=587a9d3c1b447753bda1ca1bbe6e9ada; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6496; geoSampleAccession=GSM973685; labExpId=LID47043,LID47044; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqA549NucleusTapContigs; type=bedRnaElements; md5sum=2f5a7b6887ba8e94f762896c2a87dcae; size=784K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqA549NucleusTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=A549; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002462; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6754; geoSampleAccession=GSM973685; labExpId=LID47043,LID47044; bioRep=087N,088N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=ab48a246544e2b3e98915bff5b4f9010; size=1.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3335; labExpId=LID20745; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep1; type=bam; md5sum=037b138f43f920f809ad501447d1d3d8; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3335; labExpId=LID20745; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep1; type=bai; md5sum=40f01c0d6853a85013477664a43b519e; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3336; labExpId=LID20746; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep2; type=bam; md5sum=52e5e21990c255f31ca59085bfc9d449; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3336; labExpId=LID20746; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapAlnRep2; type=bai; md5sum=b8877b581864cf7b082f5bb5b2931714; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4488; geoSampleAccession=GSM897074; labExpId=LID20745,LID20746; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapContigs; type=bedRnaElements; md5sum=991f8ebf67ccd5c4a0d3b8835266106f; size=544K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4488; geoSampleAccession=GSM897074; labExpId=LID20745,LID20746; bioRep=017WC,018WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=d6e76e3be0c10faacc3ce69d167f3952; size=1.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3335; geoSampleAccession=GSM897074; labExpId=LID20745; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapMinusRawRep1; type=bigWig; md5sum=209d292b3f189583c4c3a766e0cfb3cc; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3336; geoSampleAccession=GSM897074; labExpId=LID20746; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapMinusRawRep2; type=bigWig; md5sum=74d77389d610696cf9ccf093c5df921e; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3335; geoSampleAccession=GSM897074; labExpId=LID20745; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapPlusRawRep1; type=bigWig; md5sum=edfa6744c8883f22aebf9e3eb950b21e; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3336; geoSampleAccession=GSM897074; labExpId=LID20746; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapPlusRawRep2; type=bigWig; md5sum=3359dba672da5f6fad1cd2d33045a372; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5715; geoSampleAccession=GSM897074; labExpId=LID20745; bioRep=017WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=2bdc75489eac5f2e7dea7c1024a3d031; size=318K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5707; geoSampleAccession=GSM897074; labExpId=LID20746; bioRep=018WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=005d7914d595585c39e205d92e326c5f; size=322K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3335; geoSampleAccession=GSM897074; labExpId=LID20745; bioRep=017WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=01b2f0206db86547eccddbdcead616f4; size=972M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqAg04450CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=AG04450; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001081; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3336; geoSampleAccession=GSM897074; labExpId=LID20746; bioRep=018WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=706d39a25612e65f3d97ec671d47c1eb; size=961M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3294; labExpId=LID20909; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep1; type=bam; md5sum=37b9f5f7941794ae15d5d77bb928c3f7; size=941M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3294; labExpId=LID20909; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep1; type=bai; md5sum=e763a2872fcb77584ea602ba852a5890; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3293; labExpId=LID20910; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep2; type=bam; md5sum=c2ae5eab4f1100b16b035f771d7c89c4; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3293; labExpId=LID20910; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapAlnRep2; type=bai; md5sum=b7dc6f376373490ce27dbc0fcdd7b81e; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4474; geoSampleAccession=GSM897077; labExpId=LID20909,LID20910; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapContigs; type=bedRnaElements; md5sum=9aeea081cb023a364989bb2fd3944aed; size=300K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4474; geoSampleAccession=GSM897077; labExpId=LID20909,LID20910; bioRep=037WC,038WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=93e865c8d5babba78f233ad73fed851d; size=913K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3294; geoSampleAccession=GSM897077; labExpId=LID20909; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapMinusRawRep1; type=bigWig; md5sum=48256f7699401a458862fb4070737029; size=2.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3293; geoSampleAccession=GSM897077; labExpId=LID20910; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapMinusRawRep2; type=bigWig; md5sum=9404df46696fe113bab5fe0949a92732; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3294; geoSampleAccession=GSM897077; labExpId=LID20909; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapPlusRawRep1; type=bigWig; md5sum=9b8fbd762726e01b7d8b9c6665331133; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3293; geoSampleAccession=GSM897077; labExpId=LID20910; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqBjCellShorttotalTapPlusRawRep2; type=bigWig; md5sum=cace71c4c83f23b7a79e93fb26d9afa1; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5717; geoSampleAccession=GSM897077; labExpId=LID20909; bioRep=037WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=72901d5d6411427c566c57f653f75898; size=347K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5685; geoSampleAccession=GSM897077; labExpId=LID20910; bioRep=038WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=90644f5245674b449c7df27b28c9350e; size=354K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3294; geoSampleAccession=GSM897077; labExpId=LID20909; bioRep=037WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=ab3568167cb4ce3d28d77f7ceafb6d98; size=871M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqBjCellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=BJ; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001079; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3293; geoSampleAccession=GSM897077; labExpId=LID20910; bioRep=038WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=5e9eb2745e344a3cde79f9fcdcf1bb3e; size=854M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20CellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6490; geoSampleAccession=GSM977043; labExpId=LID44362,LID44363; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20CellTapContigs; type=bedRnaElements; md5sum=23c532623276e534062eaa9cb064af08; size=589K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20CellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6746; geoSampleAccession=GSM977043; labExpId=LID44362,LID44363; bioRep=041WC,042WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=2e3c41273f780f60f962bbc2d75d1985; size=2.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20CellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01794; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7153; geoSampleAccession=GSM977043; labExpId=LID44362; bioRep=041WC; labProtocolId=041WCs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=7921b7d53a0ae7dfbe185a164db6ab61; size=209K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20CellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01778; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7159; geoSampleAccession=GSM977043; labExpId=LID44363; bioRep=042WC; labProtocolId=042WCs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=5916cbc8d78763abcac215f5c2b79e8d; size=205K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5823; labExpId=LID44363; bioRep=042WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapAlnRep2; type=bam; md5sum=329bcca692802bd8e79855ff293f3741; size=773M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5823; labExpId=LID44363; bioRep=042WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapAlnRep2; type=bai; md5sum=ef063475b7eca23ff7b8598b917223ef; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5823; geoSampleAccession=GSM977043; labExpId=LID44363; bioRep=042WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapMinusRep2; type=bigWig; md5sum=28801fdaa896ebb8488594a2e432adee; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5823; geoSampleAccession=GSM977043; labExpId=LID44363; bioRep=042WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapPlusRep2; type=bigWig; md5sum=28eedef0f024dcf863c99bf1e1ad29f8; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01778CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5823; geoSampleAccession=GSM977043; labExpId=LID44363; bioRep=042WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=f66389ec337efcb1f3de30abc857de39; size=1.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5819; labExpId=LID44362; bioRep=041WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapAlnRep1; type=bam; md5sum=9978c0e62703cdce9cb8318664ad7aac; size=997M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5819; labExpId=LID44362; bioRep=041WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapAlnRep1; type=bai; md5sum=a799c8a465e54118ad7671ecda93f631; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5819; geoSampleAccession=GSM977043; labExpId=LID44362; bioRep=041WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapMinusRep1; type=bigWig; md5sum=124e73b5211a8988bfa182413f2467aa; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5819; geoSampleAccession=GSM977043; labExpId=LID44362; bioRep=041WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapPlusRep1; type=bigWig; md5sum=47de984a1e71e671481e028ebecc5564; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd20ro01794CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=CD20+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002879; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5819; geoSampleAccession=GSM977043; labExpId=LID44362; bioRep=041WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=42d871f465ad51ce74e090c0a73b8124; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5820; labExpId=LID46197; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqCd34mobilizedCellTapAlnRep1; type=bam; md5sum=e25638cc786cbfb0b9475b3223376579; size=7.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5820; labExpId=LID46197; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqCd34mobilizedCellTapAlnRep1; type=bai; md5sum=b7b6978e52f178a1a8b016a3b53a610a; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6846; geoSampleAccession=GSM973662; labExpId=LID46197; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqCd34mobilizedCellTapContigs; type=bedRnaElements; md5sum=b1603ef9edd7a235570bbef1790e8eae; size=2.4M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6825; geoSampleAccession=GSM973662; labExpId=LID46197; bioRep=043WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=6ab54365ba73187979c45f71a23ea7a8; size=1.3M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5820; geoSampleAccession=GSM973662; labExpId=LID46197; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqCd34mobilizedCellTapMinusRep1; type=bigWig; md5sum=caf438c483e02184b7d4692c27b30b64; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5820; geoSampleAccession=GSM973662; labExpId=LID46197; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqCd34mobilizedCellTapPlusRep1; type=bigWig; md5sum=49c788f6f3869eadea9c60435052d095; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7155; geoSampleAccession=GSM973662; labExpId=LID46197; bioRep=043WC; labProtocolId=043WCs; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=6f3d691b37eaed42306c088403598796; size=189K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqCd34mobilizedCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=CD34+_Mobilized; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002604; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5820; geoSampleAccession=GSM973662; labExpId=LID46197; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4469a4d6e430efa0fd3f46d94ad2d6c6; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1403; geoSampleAccession=GSM605625; labExpId=crg-2; bioRep=gen0101WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CellShortAln; type=bam; md5sum=03df08790fe81801c7e4fea90777a788; size=53M; replicate=101; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1403; geoSampleAccession=GSM605625; labExpId=crg-2; bioRep=gen0101WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CellShortAln; type=bai; md5sum=2dbd19bdf1c4eb1cd79c48b6cfee3d6a; size=4.7M; replicate=101; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1403; geoSampleAccession=GSM605625; labExpId=crg-2; bioRep=gen0101WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CellShortMinusRaw; type=bigWig; md5sum=d7c07abdb1583cec226fa9902f26bdb2; size=24M; replicate=101; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1403; geoSampleAccession=GSM605625; labExpId=crg-2; bioRep=gen0101WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CellShortPlusRaw; type=bigWig; md5sum=e5461d01f6fc6ee96199bc861f75c30b; size=24M; replicate=101; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1017; geoSampleAccession=GSM605625; labExpId=crg-2; bioRep=gen0101WC; labVersion=Produced by Hannon Lab; type=fastq; md5sum=91cc9e599518719f89ecf51edd360954; size=1.9G; replicate=101; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3302; labExpId=LID20899; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep1; type=bam; md5sum=26935ba53a77022957bb761f98a7791c; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3302; labExpId=LID20899; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep1; type=bai; md5sum=9fe72c813cbde82341860ce19aee4c4e; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3304; labExpId=LID20902; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep2; type=bam; md5sum=689d64234d0da419adb9f0471ce50950; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3304; labExpId=LID20902; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapAlnRep2; type=bai; md5sum=a20e51205ec82a4aeb21527d48ed259f; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4482; geoSampleAccession=GSM605625; labExpId=LID20899,LID20902; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapContigs; type=bedRnaElements; md5sum=82317bda303c278337deaa46715bb166; size=584K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4482; geoSampleAccession=GSM605625; labExpId=LID20899,LID20902; bioRep=003WC,004WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=ecb360155d1dcd894b8cefaa78652bf3; size=1.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3302; geoSampleAccession=GSM605625; labExpId=LID20899; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapMinusRawRep1; type=bigWig; md5sum=24710829d03156539f323530e398e0a3; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3304; geoSampleAccession=GSM605625; labExpId=LID20902; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapMinusRawRep2; type=bigWig; md5sum=143a411477be39cc3dda77db040b5191; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3302; geoSampleAccession=GSM605625; labExpId=LID20899; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapPlusRawRep1; type=bigWig; md5sum=2a38ce6feaf3e172f20dbd08a7ed41eb; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3304; geoSampleAccession=GSM605625; labExpId=LID20902; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapPlusRawRep2; type=bigWig; md5sum=1aba1dae749ba1eac22245c0486ba6ae; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5698; geoSampleAccession=GSM605625; labExpId=LID20899; bioRep=003WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=ab3276ec86aa6974d8656d40a7c7ef02; size=294K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5697; geoSampleAccession=GSM605625; labExpId=LID20902; bioRep=004WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=46aabee1a87d338b2f7581f1260b73d9; size=307K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3302; geoSampleAccession=GSM605625; labExpId=LID20899; bioRep=003WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=b3e5e650aeca8f1050d16ca9525da622; size=901M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000212; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3304; geoSampleAccession=GSM605625; labExpId=LID20902; bioRep=004WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=f7402929d9a8377b295171c22f33742e; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6087; labExpId=LID47655; bioRep=091CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep3; type=bam; md5sum=f248692ee240690665334d9c06b048b1; size=4.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6087; labExpId=LID47655; bioRep=091CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep3; type=bai; md5sum=b36071ddfd248d9a0a000c5aa247dfb1; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6097; labExpId=LID47656; bioRep=092CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep4; type=bam; md5sum=e2a9f5129d96f745fc72e4572c7b6759; size=7.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6097; labExpId=LID47656; bioRep=092CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapAlnRep4; type=bai; md5sum=5a0aefef85bf071a39dffa0d1bc2658f; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6849; geoSampleAccession=GSM977042; labExpId=LID47655,LID47656; bioRep=091CH,092CH; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapContigs; type=bedRnaElements; md5sum=01eaee5929318dacce7c6eca3c78daa1; size=1.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6828; geoSampleAccession=GSM977042; labExpId=LID47655,LID47656; bioRep=091CH,092CH; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=c88669368dc3063cd2986e73d7d6cb7f; size=2.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6087; geoSampleAccession=GSM977042; labExpId=LID47655; bioRep=091CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapMinusRep3; type=bigWig; md5sum=9dc38455aeb0b757095ebfdc36b3f36b; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6097; geoSampleAccession=GSM977042; labExpId=LID47656; bioRep=092CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapMinusRep4; type=bigWig; md5sum=b0d8d94091f60b826c41d55db1bfde7a; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6087; geoSampleAccession=GSM977042; labExpId=LID47655; bioRep=091CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapPlusRep3; type=bigWig; md5sum=2d7871aee95ec81bc3c198180ef2e6dc; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6097; geoSampleAccession=GSM977042; labExpId=LID47656; bioRep=092CH; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878ChromatinTapPlusRep4; type=bigWig; md5sum=7258daab91ae60b204a44810f48002f4; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7180; geoSampleAccession=GSM977042; labExpId=LID47655; bioRep=091CH; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=689b9232a2d71a1dcceda0af5d2a00e6; size=149K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7174; geoSampleAccession=GSM977042; labExpId=LID47656; bioRep=092CH; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d4a6455ee8e82a28e3c40e2cae1f6214; size=146K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6087; geoSampleAccession=GSM977042; labExpId=LID47655; bioRep=091CH; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4b7e650fcfdf1b3f190d9a44ea2c76af; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878ChromatinTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=chromatin; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002889; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6097; geoSampleAccession=GSM977042; labExpId=LID47656; bioRep=092CH; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1dcdee07a19fe8569a0a1222f26d3e7b; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1404; geoSampleAccession=GSM605627; labExpId=crg-4; bioRep=gen0108C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShortAln; type=bam; md5sum=5290526e35e0d92d9659e230324d9699; size=28M; replicate=108; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1404; geoSampleAccession=GSM605627; labExpId=crg-4; bioRep=gen0108C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShortAln; type=bai; md5sum=88c9193ef535b92265ba2c5a52cfbb95; size=3.3M; replicate=108; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1404; geoSampleAccession=GSM605627; labExpId=crg-4; bioRep=gen0108C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShortMinusRaw; type=bigWig; md5sum=32c9332abad1e6949d590e7f978fda74; size=8.8M; replicate=108; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1404; geoSampleAccession=GSM605627; labExpId=crg-4; bioRep=gen0108C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShortPlusRaw; type=bigWig; md5sum=7debeac04170a03e3e9f72d21a121b9d; size=8.7M; replicate=108; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605627; labExpId=crg-4; bioRep=gen0108C; labVersion=Produced by Hannon Lab; type=fastq; md5sum=91eb0b8e8e26d5b83cbd4af2d8312c46; size=1009M; replicate=108; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605627; labExpId=crg-4; bioRep=gen0108C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShortTransfrags; type=shortFrags; md5sum=95feaeb4c61dfc1c76c97d961425138b; size=876K; replicate=108; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3305; labExpId=LID20901; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep1; type=bam; md5sum=32e18ca6acd794dbbb9ce8cc1f986f10; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3305; labExpId=LID20901; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep1; type=bai; md5sum=2d3d34079adf8051249e50d1c025ebe8; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3307; labExpId=LID20904; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep2; type=bam; md5sum=e41f8dd0aaf9c019f6f1f055c8ea9952; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3307; labExpId=LID20904; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapAlnRep2; type=bai; md5sum=f92da2727205c0a9135ae50a1953be59; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4489; geoSampleAccession=GSM605627; labExpId=LID20901,LID20904; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapContigs; type=bedRnaElements; md5sum=8767b294072074498488045c881058ce; size=438K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4489; geoSampleAccession=GSM605627; labExpId=LID20901,LID20904; bioRep=003C,004C; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=b3e4bf177ec4d02b548464a4f2e3d45f; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3305; geoSampleAccession=GSM605627; labExpId=LID20901; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapMinusRawRep1; type=bigWig; md5sum=1b692145fbefb07ff3d2265dea52cd7b; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3307; geoSampleAccession=GSM605627; labExpId=LID20904; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapMinusRawRep2; type=bigWig; md5sum=9bd53d6a6b7fd37604a8161d6ee013a8; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3305; geoSampleAccession=GSM605627; labExpId=LID20901; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapPlusRawRep1; type=bigWig; md5sum=8af9e35cc9dc0c90df759ab5b64ecc0a; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3307; geoSampleAccession=GSM605627; labExpId=LID20904; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapPlusRawRep2; type=bigWig; md5sum=34b5b31fccea887efdc370650f481b0f; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5682; geoSampleAccession=GSM605627; labExpId=LID20901; bioRep=003C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=815de8d674105a09ee4b126db350d3b5; size=304K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5695; geoSampleAccession=GSM605627; labExpId=LID20904; bioRep=004C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=c153d5a3c0fa9b56e17f1065d5cd3da7; size=315K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3305; geoSampleAccession=GSM605627; labExpId=LID20901; bioRep=003C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=53d0fa4292dbe046e2c471ea4261f94e; size=770M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878CytosolShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000203; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3307; geoSampleAccession=GSM605627; labExpId=LID20904; bioRep=004C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=bff82a306cc96cb35dd764cd7f1b3b09; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7100; labExpId=LID47653; bioRep=091NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep3; type=bam; md5sum=51abe3d228a461ad0391a657b6ffba04; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7100; labExpId=LID47653; bioRep=091NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep3; type=bai; md5sum=d54d8dce0e9950f975de5020c01e62b3; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7099; labExpId=LID47654; bioRep=092NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep4; type=bam; md5sum=0e6007a4b6b1413dda5a86bcfb37a8d7; size=8.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7099; labExpId=LID47654; bioRep=092NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapAlnRep4; type=bai; md5sum=9be2d82c624006d7b227b98241e252f1; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7264; geoSampleAccession=GSM977032; labExpId=LID47653,LID47654; bioRep=091NL,092NL; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapContigs; type=bedRnaElements; md5sum=608bdd32269565bd6d249dac37e9fec6; size=5.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7264; geoSampleAccession=GSM977032; labExpId=LID47653,LID47654; bioRep=091NL,092NL; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=d19d1c88ad16c7345c05c9cd460854dc; size=4.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7100; geoSampleAccession=GSM977032; labExpId=LID47653; bioRep=091NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapMinusRawRep3; type=bigWig; md5sum=41114ab48698b9afbb69eaedf2277f24; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7099; geoSampleAccession=GSM977032; labExpId=LID47654; bioRep=092NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapMinusRawRep4; type=bigWig; md5sum=a0f87c2235c287511008ca1dcd28d1ad; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7100; geoSampleAccession=GSM977032; labExpId=LID47653; bioRep=091NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapPlusRawRep3; type=bigWig; md5sum=990a496b275182b40ec019fc33692a90; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7099; geoSampleAccession=GSM977032; labExpId=LID47654; bioRep=092NL; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqGm12878NucleolusTapPlusRawRep4; type=bigWig; md5sum=c73f244ba51f8888603a4f60ec9a6d2e; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7166; geoSampleAccession=GSM977032; labExpId=LID47653; bioRep=091NL; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=b55eb8e4ab1be95e20a75652620aae17; size=145K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7148; geoSampleAccession=GSM977032; labExpId=LID47654; bioRep=092NL; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=eba5d3bb54e9ef94c35d7df6bd8ed0fa; size=143K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7100; geoSampleAccession=GSM977032; labExpId=LID47653; bioRep=091NL; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1361f9583e0293501e6f594aa6c3e5e8; size=9.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleolusTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=nucleolus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002942; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7099; geoSampleAccession=GSM977032; labExpId=LID47654; bioRep=092NL; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=e05f2ffa635f1e7f6f5d9c358039231d; size=7.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1402; geoSampleAccession=GSM605633; labExpId=crg-6; bioRep=gen0112N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShortAln; type=bam; md5sum=d710bdf4ab5e03a5309e1783fb75c0df; size=51M; replicate=112; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1402; geoSampleAccession=GSM605633; labExpId=crg-6; bioRep=gen0112N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShortAln; type=bai; md5sum=94e066bc51ed7d73499ad8c63405557a; size=3.0M; replicate=112; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1402; geoSampleAccession=GSM605633; labExpId=crg-6; bioRep=gen0112N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShortMinusRaw; type=bigWig; md5sum=6663326e3102cf17b0d9ba4b08084512; size=8.2M; replicate=112; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1402; geoSampleAccession=GSM605633; labExpId=crg-6; bioRep=gen0112N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShortPlusRaw; type=bigWig; md5sum=2549445d3289d3666cf5f4c0adafd79c; size=8.2M; replicate=112; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605633; labExpId=crg-6; bioRep=gen0112N; labVersion=Produced by Hannon Lab; type=fastq; md5sum=dc95979eb6e3937a47511cd7cb9b035a; size=1.3G; replicate=112; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605633; labExpId=crg-6; bioRep=gen0112N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShortTransfrags; type=shortFrags; md5sum=35df1ca77cff34683b9baa6b2426b182; size=1.2M; replicate=112; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3308; labExpId=LID20900; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep1; type=bam; md5sum=302ca6e4b1ea53fbe1d3e68cf0a59670; size=841M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3308; labExpId=LID20900; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep1; type=bai; md5sum=eb0df8cc04baf79ed269e99a4d9bc972; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3338; labExpId=LID20903; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep2; type=bam; md5sum=23650e6de625f0de1148522020e302c9; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3338; labExpId=LID20903; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapAlnRep2; type=bai; md5sum=68df2dc58a3e36daf7ea15dce9fd97f9; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4477; geoSampleAccession=GSM605633; labExpId=LID20900,LID20903; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapContigs; type=bedRnaElements; md5sum=5a0210832fb59ea929b588eefb276672; size=721K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4477; geoSampleAccession=GSM605633; labExpId=LID20900,LID20903; bioRep=003N,004N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=1f9ac70bbb56b4836f727535934e1975; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3308; geoSampleAccession=GSM605633; labExpId=LID20900; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapMinusRawRep1; type=bigWig; md5sum=ca6b72d62e5f9dfa415ce1f537fa7dd3; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3338; geoSampleAccession=GSM605633; labExpId=LID20903; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapMinusRawRep2; type=bigWig; md5sum=e74bcdc8965d96a1de75625692083d13; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3308; geoSampleAccession=GSM605633; labExpId=LID20900; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapPlusRawRep1; type=bigWig; md5sum=f7a6b19f4d7f77116c43692c6a16ade7; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3338; geoSampleAccession=GSM605633; labExpId=LID20903; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapPlusRawRep2; type=bigWig; md5sum=471ecceaac3018f1bd7cfabe77837878; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5709; geoSampleAccession=GSM605633; labExpId=LID20900; bioRep=003N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=9a7631dfa386f86a5ac443bfbfa138b8; size=308K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5696; geoSampleAccession=GSM605633; labExpId=LID20903; bioRep=004N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=7e64919241ec856776a45951e37ca1f7; size=338K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3308; geoSampleAccession=GSM605633; labExpId=LID20900; bioRep=003N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=bc98249bb02a5e7e6fe6c6a2a608b197; size=853M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqGm12878NucleusShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000204; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3338; geoSampleAccession=GSM605633; labExpId=LID20903; bioRep=004N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=1645e1c4b3ae9c3647b94d8e0d77efba; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3340; labExpId=LID20905; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep1; type=bam; md5sum=f2599972fca418b1ce0ab702f38aebb0; size=815M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3340; labExpId=LID20905; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep1; type=bai; md5sum=20b8d76b4be3fe2735e77c3dd0469b35; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3341; labExpId=LID20906; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep2; type=bam; md5sum=cc23a429bfe42213ae82c221514457b8; size=795M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3341; labExpId=LID20906; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapAlnRep2; type=bai; md5sum=192a92b922959e8f9ddfe49c436aec7a; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4485; geoSampleAccession=GSM897073; labExpId=LID20905,LID20906; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapContigs; type=bedRnaElements; md5sum=58e33cc66e8ff9414f92fdaf58781885; size=647K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4485; geoSampleAccession=GSM897073; labExpId=LID20905,LID20906; bioRep=005WC,006WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=b7915f6c1f4f1832bbc23715c888d01f; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3340; geoSampleAccession=GSM897073; labExpId=LID20905; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapMinusRawRep1; type=bigWig; md5sum=381ec3bdde95cf32cc2ef48dc2fe158d; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3341; geoSampleAccession=GSM897073; labExpId=LID20906; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapMinusRawRep2; type=bigWig; md5sum=fd9ee3f60e44bffb35696496e7234bf8; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3340; geoSampleAccession=GSM897073; labExpId=LID20905; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapPlusRawRep1; type=bigWig; md5sum=876438b671af7d900f9d6c5351fdb7af; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3341; geoSampleAccession=GSM897073; labExpId=LID20906; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapPlusRawRep2; type=bigWig; md5sum=f1761d3d65f33865bb86849a81cc5594; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5714; geoSampleAccession=GSM897073; labExpId=LID20905; bioRep=005WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=b6575c80c5f694912261bedb10a1ec21; size=312K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5704; geoSampleAccession=GSM897073; labExpId=LID20906; bioRep=006WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=97f2034c4c3d57c7abe4ce72fba75651; size=308K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3340; geoSampleAccession=GSM897073; labExpId=LID20905; bioRep=005WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=1dce5cd6d0e7f7db15d2a24c7b302773; size=759M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001082; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3341; geoSampleAccession=GSM897073; labExpId=LID20906; bioRep=006WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=6a25b6692785467ed6d4f07b650c981d; size=731M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3342; labExpId=LID20908; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapAlnRep2; type=bam; md5sum=fd572bffc038fe6b7943623867cb8250; size=563M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3342; labExpId=LID20908; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapAlnRep2; type=bai; md5sum=32343ad3ad52bfa64847cd11f5441739; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; submittedDataVersion=V2 - Changed . to -1 to represent NULL; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4495; geoSampleAccession=GSM897072; labExpId=LID20908; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapContigsV2; type=bedRnaElements; md5sum=f3ec5c1af5742e8c68b6a73ecdebfa4c; size=1.6M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4495; geoSampleAccession=GSM897072; labExpId=LID20908; bioRep=006C; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=3f17c0c427a08e4308e314655d037ccb; size=1.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3342; geoSampleAccession=GSM897072; labExpId=LID20908; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapMinusRawRep2; type=bigWig; md5sum=05f4e9214c02870fa6f7b0e807cbaffd; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3342; geoSampleAccession=GSM897072; labExpId=LID20908; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapPlusRawRep2; type=bigWig; md5sum=dcde810070f32fbdaf722c425cd2e7d5; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3342; geoSampleAccession=GSM897072; labExpId=LID20908; bioRep=006C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=9c717d33ac5a9ff3b954d35dd914cf29; size=453M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescCytosolTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001083; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7145; geoSampleAccession=GSM897072; labExpId=LID20908; bioRep=006C; labProtocolId=006Cs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=7df215d1abe900bdc96ac64206a92811; size=170K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3343; labExpId=LID20907; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapAlnRep2; type=bam; md5sum=773fae1c64130b176774ed9f69aef8e6; size=843M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3343; labExpId=LID20907; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapAlnRep2; type=bai; md5sum=4c42e9f1a7adeb5cac1766a85e782698; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; submittedDataVersion=V2 - Changed . to -1 to represent NULL; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4496; geoSampleAccession=GSM897071; labExpId=LID20907; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapContigsV2; type=bedRnaElements; md5sum=1fc71d7535e93b09b16d8ed675ebc2f0; size=1.7M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4496; geoSampleAccession=GSM897071; labExpId=LID20907; bioRep=006N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=6fd7e6b3c821057ec1f2c159f6eb845f; size=1009K; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3343; geoSampleAccession=GSM897071; labExpId=LID20907; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapMinusRawRep2; type=bigWig; md5sum=34b0ee01cf0202a92ca5c8900898f79b; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3343; geoSampleAccession=GSM897071; labExpId=LID20907; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapPlusRawRep2; type=bigWig; md5sum=813df911b2f3c04b72beed6f888b7749; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5687; geoSampleAccession=GSM897071; labExpId=LID20907; bioRep=006N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=51daca410714ecb7423e60fbd1a7c090; size=350K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1hescNucleusShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-hESC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001084; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3343; geoSampleAccession=GSM897071; labExpId=LID20907; bioRep=006N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=45ac3325433a21ac411e8dcf0f5dbbd9; size=912M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7095; labExpId=LID48357; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep1; type=bam; md5sum=186dad6df2cf586fd39ec72fb3a23a80; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7095; labExpId=LID48357; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep1; type=bai; md5sum=41c9c5d2bdf1421a415b645f8ae34860; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7101; labExpId=LID48358; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep2; type=bam; md5sum=5b210eacf3b3e6b9dbc97a78665f0b78; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7101; labExpId=LID48358; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellAlnRep2; type=bai; md5sum=bf2a644a65ccf200adc8b1d1674c7dba; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7094; labExpId=LID48353; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep1; type=bam; md5sum=a25dc20f24f6fb0a8e40c2dbb8c00810; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7094; labExpId=LID48353; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep1; type=bai; md5sum=8391871de1e7b10d8a8931ef30e215fb; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7096; labExpId=LID48354; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep2; type=bam; md5sum=4365f8b78d9f2cf68587e6a36436701b; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7096; labExpId=LID48354; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapAlnRep2; type=bai; md5sum=f80eee22c352398f06a9e238137446a7; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7262; geoSampleAccession=GSM977030; labExpId=LID48353,LID48354; bioRep=095WC,096WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapContigs; type=bedRnaElements; md5sum=d1fadba2545d2812a0d0330e146c73ba; size=768K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7262; geoSampleAccession=GSM977030; labExpId=LID48353,LID48354; bioRep=095WC,096WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=aaa59fd966da82dd7005e45e72c9f299; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7094; geoSampleAccession=GSM977030; labExpId=LID48353; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapMinusRawRep1; type=bigWig; md5sum=015760465a6dd94a8e245a18f7ce489e; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7096; geoSampleAccession=GSM977030; labExpId=LID48354; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapMinusRawRep2; type=bigWig; md5sum=044feb4f2edd9ee974546c25687d485a; size=6.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7094; geoSampleAccession=GSM977030; labExpId=LID48353; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapPlusRawRep1; type=bigWig; md5sum=0ab8bf5d1a63ff307b65db3a1349f596; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7096; geoSampleAccession=GSM977030; labExpId=LID48354; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellCiptapPlusRawRep2; type=bigWig; md5sum=bab18eb63ebbf6564bf831d476aab003; size=6.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7218; geoSampleAccession=GSM977030; labExpId=LID48353; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=65bda0040c5458af67943a01298e6e60; size=165K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7222; geoSampleAccession=GSM977030; labExpId=LID48354; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=968e76b26a9d6c3739bd2751073cbe98; size=169K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7094; geoSampleAccession=GSM977030; labExpId=LID48353; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=967972f80cbae124c875ceff71cf5d3c; size=9.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellCiptapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002944; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7096; geoSampleAccession=GSM977030; labExpId=LID48354; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=77f130b7928fdc175adb6944249de82f; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7261; geoSampleAccession=GSM977031; labExpId=LID48357,LID48358; bioRep=095WC,096WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellContigs; type=bedRnaElements; md5sum=d04dd88c373cb994b68252a1b7664c87; size=659K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7261; geoSampleAccession=GSM977031; labExpId=LID48357,LID48358; bioRep=095WC,096WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=51c816c60709490a27f64792b26d882b; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7095; geoSampleAccession=GSM977031; labExpId=LID48357; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellMinusRawRep1; type=bigWig; md5sum=057ddc80856e3445ebc77338090a0d3d; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7101; geoSampleAccession=GSM977031; labExpId=LID48358; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellMinusRawRep2; type=bigWig; md5sum=79afa7de207a233a7145baa2c269c784; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7095; geoSampleAccession=GSM977031; labExpId=LID48357; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellPlusRawRep1; type=bigWig; md5sum=1ff340cdf3d6b430171e96858332cb01; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7101; geoSampleAccession=GSM977031; labExpId=LID48358; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellPlusRawRep2; type=bigWig; md5sum=bbe97eb61f0dec7b7f2e04095a6e8904; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7252; geoSampleAccession=GSM977031; labExpId=LID48357; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=762aca802f6a882dac76ce416b60387a; size=167K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7245; geoSampleAccession=GSM977031; labExpId=LID48358; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d4f5536006221a75f66d9097169b179d; size=167K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7095; geoSampleAccession=GSM977031; labExpId=LID48357; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=378a783f4cce53e8da897cd687bcd76c; size=8.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002943; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-19; subId=7101; geoSampleAccession=GSM977031; labExpId=LID48358; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f799a9240826c38dd84ffa591144edfb; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7097; labExpId=LID48355; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep1; type=bam; md5sum=9841ef6bcb5650f6d5cf85d175c4e7a8; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7097; labExpId=LID48355; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep1; type=bai; md5sum=76e85a27b8b31abc3aab9a1220612dab; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7098; labExpId=LID48356; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep2; type=bam; md5sum=9317731e3d22e6ca7f150efae42c21a9; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7098; labExpId=LID48356; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapAlnRep2; type=bai; md5sum=68627e4a57d9ddc320e360d3e6e79403; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7265; geoSampleAccession=GSM977029; labExpId=LID48355,LID48356; bioRep=095WC,096WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapContigs; type=bedRnaElements; md5sum=bcdf9b0b63382da44cc5558953643808; size=798K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7265; geoSampleAccession=GSM977029; labExpId=LID48355,LID48356; bioRep=095WC,096WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=f1b02383fc5901fcd1de27f6c2fb2594; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7097; geoSampleAccession=GSM977029; labExpId=LID48355; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapMinusRawRep1; type=bigWig; md5sum=bf1abc1704bf3d8d1bb209c15e9c9977; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7098; geoSampleAccession=GSM977029; labExpId=LID48356; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapMinusRawRep2; type=bigWig; md5sum=dae67f722f3a25e8fe65da1e4f628f97; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7097; geoSampleAccession=GSM977029; labExpId=LID48355; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapPlusRawRep1; type=bigWig; md5sum=5a1847b97f2942b317f185911c9ad490; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7098; geoSampleAccession=GSM977029; labExpId=LID48356; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqH1neuronsCellTapPlusRawRep2; type=bigWig; md5sum=b26a7e0421746fb472819575bee4e6c2; size=6.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7239; geoSampleAccession=GSM977029; labExpId=LID48355; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=7ef57e03523952e3ef31f48551ab7db7; size=169K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7231; geoSampleAccession=GSM977029; labExpId=LID48356; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=91cef4d9f11d36b457f66a1f28d562f1; size=171K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7097; geoSampleAccession=GSM977029; labExpId=LID48355; bioRep=095WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cb3b3b39c37d0d4f3e244350fec3e84a; size=9.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqH1neuronsCellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-neurons; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=Cellular Dyn; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002945; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; subId=7098; geoSampleAccession=GSM977029; labExpId=LID48356; bioRep=096WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4f5e1b6aace31dc36b2b8a6a1d7f8847; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf609010111CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5928; labExpId=LID47434; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf609010111CellTapAlnRep2; type=bam; md5sum=d268e832798ee3f4573ce6bf7df16d75; size=8.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf609010111CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5928; labExpId=LID47434; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf609010111CellTapAlnRep2; type=bai; md5sum=fc8223f2fa0c28f6d499acc2162868d8; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf609010111CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5928; geoSampleAccession=GSM977035; labExpId=LID47434; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf609010111CellTapMinusRep2; type=bigWig; md5sum=705ec1725f8102b5585c94902b6c091e; size=6.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf609010111CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5928; geoSampleAccession=GSM977035; labExpId=LID47434; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf609010111CellTapPlusRep2; type=bigWig; md5sum=f3335d66f2ac994772309dfb13633288; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf609010111CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5928; geoSampleAccession=GSM977035; labExpId=LID47434; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=84926740ac21dc0bf84f6c3c22c1d44c; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf61113019CellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5942; labExpId=LID47433; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf61113019CellTapAlnRep1; type=bam; md5sum=06c14f6506f35ae23cee441c1268c7bc; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf61113019CellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5942; labExpId=LID47433; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf61113019CellTapAlnRep1; type=bai; md5sum=ebf19e02b6ba84ff6d6b35afdaf1ad41; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf61113019CellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5942; geoSampleAccession=GSM977035; labExpId=LID47433; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf61113019CellTapMinusRep1; type=bigWig; md5sum=cc4a2c1e27bcaa5c18672af8130dd553; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf61113019CellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5942; geoSampleAccession=GSM977035; labExpId=LID47433; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoaf61113019CellTapPlusRep1; type=bigWig; md5sum=2f071baae6df1133d0e2db2c00877758; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoaf61113019CellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5942; geoSampleAccession=GSM977035; labExpId=LID47433; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=49f7cb1d9db62ced5317054686e103d7; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoafCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6111301.9,6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6518; geoSampleAccession=GSM977035; labExpId=LID47433,LID47434; bioRep=055WC,056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoafCellTapContigs; type=bedRnaElements; md5sum=05c534e48156f81aaba65153f275cfa6; size=1017K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoafCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6111301.9,6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6775; geoSampleAccession=GSM977035; labExpId=LID47433,LID47434; bioRep=055WC,056WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=ec2f8f35d6d85ab5c8905ac844981fee; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoafCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6111301.9; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7156; geoSampleAccession=GSM977035; labExpId=LID47433; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=c28190565b0f0bc3257af251eab7b3a1; size=220K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoafCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoAF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6090101.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002880; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7173; geoSampleAccession=GSM977035; labExpId=LID47434; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=1c0d521238fdd7d01c2e69eee1cbc4ae; size=214K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec70717061CellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5947; labExpId=LID47435; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec70717061CellTapAlnRep1; type=bam; md5sum=f7e85e486923619105d3cf003c7fdd3f; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec70717061CellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5947; labExpId=LID47435; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec70717061CellTapAlnRep1; type=bai; md5sum=c31e0c849e8e9fdbc87a8ebc162045ed; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec70717061CellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5947; geoSampleAccession=GSM977040; labExpId=LID47435; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec70717061CellTapMinusRep1; type=bigWig; md5sum=9a789c266b94ded457e015b8ae5d6a8d; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec70717061CellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5947; geoSampleAccession=GSM977040; labExpId=LID47435; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec70717061CellTapPlusRep1; type=bigWig; md5sum=1199468d43c31cc09c28df211313f357; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec70717061CellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5947; geoSampleAccession=GSM977040; labExpId=LID47435; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5fa119267ee24c9a40365efadae924a9; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec80611021CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5953; labExpId=LID47436; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec80611021CellTapAlnRep2; type=bam; md5sum=0c32b2d4445ff2ed9c7018d912e3fbe2; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec80611021CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5953; labExpId=LID47436; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec80611021CellTapAlnRep2; type=bai; md5sum=e9db804d22b9deec49422557da94a843; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec80611021CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5953; geoSampleAccession=GSM977040; labExpId=LID47436; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec80611021CellTapMinusRep2; type=bigWig; md5sum=73687dad66949a5b8160cebf3aacfe04; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec80611021CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5953; geoSampleAccession=GSM977040; labExpId=LID47436; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoec80611021CellTapPlusRep2; type=bigWig; md5sum=ba8ca374f3bc147f97db3e48f1ed9939; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoec80611021CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5953; geoSampleAccession=GSM977040; labExpId=LID47436; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a37e655994c4609e909df2b4639cda12; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoecCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6489; geoSampleAccession=GSM977040; labExpId=LID47435,LID47436; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHaoecCellTapContigs; type=bedRnaElements; md5sum=6dd2e65ed1dae465c7a5bb19995d4414; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoecCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=7071706.1,8061102.1; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6821; geoSampleAccession=GSM977040; labExpId=LID47435,LID47436; bioRep=057WC,058WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=63ee53b0889ef1507f4baa9666dab832; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoecCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071706.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7140; geoSampleAccession=GSM977040; labExpId=LID47435; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=a27f7fc6442d717a04dc5474b21ed6df; size=211K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHaoecCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HAoEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8061102.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002885; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7172; geoSampleAccession=GSM977040; labExpId=LID47436; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=69b7e141988a6a0084ae5059d6c72482; size=214K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5950; labExpId=LID47475; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapAlnRep1; type=bam; md5sum=db67acd8221c6355615573d2e9dcd09b; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5950; labExpId=LID47475; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapAlnRep1; type=bai; md5sum=de8b67b9772f9d72a24b58b55153ec1d; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5950; geoSampleAccession=GSM977037; labExpId=LID47475; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapMinusRep1; type=bigWig; md5sum=60877750db8ffdc5dfe9742457984f32; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5950; geoSampleAccession=GSM977037; labExpId=LID47475; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapPlusRep1; type=bigWig; md5sum=a09596e408415f0519bd554420dbf79c; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch00113082pCellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5950; geoSampleAccession=GSM977037; labExpId=LID47475; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d88962efc6dd23a59d7b0d12c579cf46; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5948; labExpId=LID47476; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapAlnRep2; type=bam; md5sum=f0738a1a4dd3721fdd5058968050695f; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5948; labExpId=LID47476; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapAlnRep2; type=bai; md5sum=7da1877a42cb1fa5730b05e8b07f6584; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5948; geoSampleAccession=GSM977037; labExpId=LID47476; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapMinusRep2; type=bigWig; md5sum=652584781d09742fe6b86e65e66f8a80; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5948; geoSampleAccession=GSM977037; labExpId=LID47476; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapPlusRep2; type=bigWig; md5sum=8be29c7e6adcfbca63ce7d35d7591d6e; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHch81008082CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5948; geoSampleAccession=GSM977037; labExpId=LID47476; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c724ab1b641fea647a147a81c9b78fc8; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHchCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6504; geoSampleAccession=GSM977037; labExpId=LID47475,LID47476; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHchCellTapContigs; type=bedRnaElements; md5sum=5d5b2ddec997fcf6aa32c966ceb9b298; size=483K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHchCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6762; geoSampleAccession=GSM977037; labExpId=LID47475,LID47476; bioRep=059WC,060WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=a5295f5d13a0fcd0a74a671f5a787a72; size=832K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHchCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7181; geoSampleAccession=GSM977037; labExpId=LID47475; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=7a4ba688c8d6d8cede9577eb863c7f6b; size=261K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHchCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HCH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8100808.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002886; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7152; geoSampleAccession=GSM977037; labExpId=LID47476; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=22f9d61724c1ffd10a772ab775f9647d; size=263K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3344; labExpId=LID21143; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep1; type=bam; md5sum=bb601ea89be697303c2148860ddd9ec1; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3344; labExpId=LID21143; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep1; type=bai; md5sum=d65f50a8660a9665df78bcb1f3d016fe; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3345; labExpId=LID21146; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep2; type=bam; md5sum=1027f7e402f98a0ac1dae6125ce2a445; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3345; labExpId=LID21146; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapAlnRep2; type=bai; md5sum=0ffbdd41a73dd17f7672ccccd428f770; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4486; geoSampleAccession=GSM897079; labExpId=LID21143,LID21146; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapContigs; type=bedRnaElements; md5sum=fa92606bb88a35030ad5c7d760232e65; size=702K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4486; geoSampleAccession=GSM897079; labExpId=LID21143,LID21146; bioRep=011WC,012WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=dec20cad92d74f7c44ed4d6ea4ba80f3; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3344; geoSampleAccession=GSM897079; labExpId=LID21143; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapMinusRawRep1; type=bigWig; md5sum=8260224488a6271a85b6498e185c0bc3; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3345; geoSampleAccession=GSM897079; labExpId=LID21146; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapMinusRawRep2; type=bigWig; md5sum=e5f7015c0722d153965d38ee1063a1ed; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3344; geoSampleAccession=GSM897079; labExpId=LID21143; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapPlusRawRep1; type=bigWig; md5sum=4280926f2f48b85d793af36bcc26c494; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3345; geoSampleAccession=GSM897079; labExpId=LID21146; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapPlusRawRep2; type=bigWig; md5sum=38240c3ed165bf6124fa05d7efd7861a; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5699; geoSampleAccession=GSM897079; labExpId=LID21143; bioRep=011WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=898e443771f88df2800e63a93c5cfb0a; size=296K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5710; geoSampleAccession=GSM897079; labExpId=LID21146; bioRep=012WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=79a434aa03ef698ee661aebfb5a45a1b; size=298K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3344; geoSampleAccession=GSM897079; labExpId=LID21143; bioRep=011WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=4b95560edc2f405c0d40021d9558ded4; size=931M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001089; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3345; geoSampleAccession=GSM897079; labExpId=LID21146; bioRep=012WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=2250920043dafed0e4513e23e1c76be7; size=877M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3346; labExpId=LID21145; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep1; type=bam; md5sum=10a1ec54fb3bdf40a29a4163cc5e9995; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3346; labExpId=LID21145; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep1; type=bai; md5sum=6b7c0a42ff436233dbf9eb254acf24e7; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3347; labExpId=LID21148; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep2; type=bam; md5sum=7eddb273e507a3a79df0173ff42e05f2; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3347; labExpId=LID21148; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapAlnRep2; type=bai; md5sum=14548ff52156047ee27635a9af5b9af5; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4487; geoSampleAccession=GSM897069; labExpId=LID21145,LID21148; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapContigs; type=bedRnaElements; md5sum=88afb3b1799e36557547c9f43c6f8eb2; size=752K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4487; geoSampleAccession=GSM897069; labExpId=LID21145,LID21148; bioRep=011C,012C; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=8720b5fa41a309297deb9cc539dbcc7a; size=2.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3346; geoSampleAccession=GSM897069; labExpId=LID21145; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapMinusRawRep1; type=bigWig; md5sum=4293962ed61b5edb5c726b6ef9975c58; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3347; geoSampleAccession=GSM897069; labExpId=LID21148; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapMinusRawRep2; type=bigWig; md5sum=f5dd66f0c73b1f5c8ea4665a692e0c4d; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3346; geoSampleAccession=GSM897069; labExpId=LID21145; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapPlusRawRep1; type=bigWig; md5sum=89987d9f0be770f7223b90256d7bd340; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3347; geoSampleAccession=GSM897069; labExpId=LID21148; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapPlusRawRep2; type=bigWig; md5sum=14d80597887629f040093d3bda26ecd8; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5680; geoSampleAccession=GSM897069; labExpId=LID21145; bioRep=011C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=97a388e1ce60be1945a7abae630c88e3; size=314K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5693; geoSampleAccession=GSM897069; labExpId=LID21148; bioRep=012C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=ba8502e48be3c7823bc327084864505b; size=315K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3346; geoSampleAccession=GSM897069; labExpId=LID21145; bioRep=011C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=71ab9acadfe6ae1cc5cb64ebcf9e965c; size=924M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3CytosolShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001087; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3347; geoSampleAccession=GSM897069; labExpId=LID21148; bioRep=012C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=3d1698c7c3f0671c0dc81ed639cdae29; size=935M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3348; labExpId=LID21144; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep1; type=bam; md5sum=edd0a9021247c896f5346bbb3f707c33; size=682M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3348; labExpId=LID21144; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep1; type=bai; md5sum=8648c674337cfabe90d0e7d4a6a2b683; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3349; labExpId=LID21147; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep2; type=bam; md5sum=bc3384ce4c6994a844333c3f5a712d8c; size=774M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3349; labExpId=LID21147; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapAlnRep2; type=bai; md5sum=dc00f5567cf02840987016f5fdd9e9cf; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4470; geoSampleAccession=GSM897080; labExpId=LID21144,LID21147; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapContigs; type=bedRnaElements; md5sum=60e84fbd8031bd215e7d8103b2197dec; size=279K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4470; geoSampleAccession=GSM897080; labExpId=LID21144,LID21147; bioRep=011N,012N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=d801e25952c2bbaa88f79a6f2ee95b6d; size=990K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3348; geoSampleAccession=GSM897080; labExpId=LID21144; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapMinusRawRep1; type=bigWig; md5sum=87fbaea5961f1983d8b01aab3b2d96ab; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3349; geoSampleAccession=GSM897080; labExpId=LID21147; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapMinusRawRep2; type=bigWig; md5sum=10473c0215e9a1481597846efb597ce4; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3348; geoSampleAccession=GSM897080; labExpId=LID21144; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapPlusRawRep1; type=bigWig; md5sum=9a1de511d5522bf3ad92fd76c7c4c9cc; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3349; geoSampleAccession=GSM897080; labExpId=LID21147; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapPlusRawRep2; type=bigWig; md5sum=57b97f38feea7d5255133ec475a6c99c; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5706; geoSampleAccession=GSM897080; labExpId=LID21144; bioRep=011N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=bcf25fe06918736cf99458fd6ce5e03d; size=349K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5700; geoSampleAccession=GSM897080; labExpId=LID21147; bioRep=012N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=4869b33064efb54ae8d3c9b6aa90aba4; size=349K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3348; geoSampleAccession=GSM897080; labExpId=LID21144; bioRep=011N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=5b2587944b679f1be4f9400e5a79c240; size=717M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHelas3NucleusShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HeLa-S3; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001088; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3349; geoSampleAccession=GSM897080; labExpId=LID21147; bioRep=012N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=a2a472e72f2e505814c5fbb4b6679f0c; size=727M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4060; labExpId=LID44460; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep1; type=bam; md5sum=2c351dc6f0523f40fc7e86dba023ba48; size=856M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4060; labExpId=LID44460; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep1; type=bai; md5sum=00d2403ee824ae186bca827b5122c50e; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4062; labExpId=LID44461; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep2; type=bam; md5sum=8cefbe45153562f2f273ae51ea7091d7; size=956M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4062; labExpId=LID44461; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapAlnRep2; type=bai; md5sum=8c7fbcc72da910f50cf19a8f7ccc5966; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4479; geoSampleAccession=GSM897084; labExpId=LID44460,LID44461; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapContigs; type=bedRnaElements; md5sum=e0c22ab8dfd7c994e939be5e6c6fb633; size=318K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4479; geoSampleAccession=GSM897084; labExpId=LID44460,LID44461; bioRep=013WC,014WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=11308f834bc398b2796c05d84f5e0917; size=876K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4060; geoSampleAccession=GSM897084; labExpId=LID44460; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapMinusRawRep1; type=bigWig; md5sum=a5cb40841ef1432aa986919792cab224; size=1.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4062; geoSampleAccession=GSM897084; labExpId=LID44461; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapMinusRawRep2; type=bigWig; md5sum=f1f4063da30b2e9aa28fd3ffe9f128de; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4060; geoSampleAccession=GSM897084; labExpId=LID44460; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapPlusRawRep1; type=bigWig; md5sum=94d57ceaed92102ff2999ae71fae9d0a; size=1.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4062; geoSampleAccession=GSM897084; labExpId=LID44461; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapPlusRawRep2; type=bigWig; md5sum=0825aa29ea183af2270f2ac76f23e749; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4060; geoSampleAccession=GSM897084; labExpId=LID44460; bioRep=013WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=4daa2f0023cb9e468b6be00aad2b048b; size=938M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; subId=4062; geoSampleAccession=GSM897084; labExpId=LID44461; bioRep=014WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=8bdbad322d9ee8dc0467006ff1c02e1b; size=1000M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7259; geoSampleAccession=GSM897084; labExpId=LID44460; bioRep=013WC; labProtocolId=013WCs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=e5cdc295767070b1593b29b2b921d309; size=190K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001741; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7227; geoSampleAccession=GSM897084; labExpId=LID44461; bioRep=014WC; labProtocolId=014WCs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=0fc16310d4a32dbbe7b46cae821b5922; size=192K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2012-02-07; dateUnrestricted=2012-11-07; subId=4061; labExpId=LID44464; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep1; type=bam; md5sum=69c21e124de6a69cfb235e6d5aeac352; size=755M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2012-02-07; dateUnrestricted=2012-11-07; subId=4061; labExpId=LID44464; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep1; type=bai; md5sum=f8e7923c6fdf1c566c4d8f2fab5f22d9; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4114; labExpId=LID44465; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep2; type=bam; md5sum=09ddd4ebe294058bdee825d659c6e76d; size=441M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4114; labExpId=LID44465; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapAlnRep2; type=bai; md5sum=35c3406a03eacd66aaf75fc99e006a13; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4484; geoSampleAccession=GSM897082; labExpId=LID44464,LID44465; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapContigs; type=bedRnaElements; md5sum=e3ba859e03d02e26bde7abd8219c695f; size=290K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4484; geoSampleAccession=GSM897082; labExpId=LID44464,LID44465; bioRep=013C,014C; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=71b0fe60cf3d5e604f6c97ad1e44ab72; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2012-02-07; dateUnrestricted=2012-11-07; subId=4061; geoSampleAccession=GSM897082; labExpId=LID44464; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapMinusRawRep1; type=bigWig; md5sum=4628897166af37d289a406149a948623; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4114; geoSampleAccession=GSM897082; labExpId=LID44465; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapMinusRawRep2; type=bigWig; md5sum=1b54aac3b8151f98100163b6526520b7; size=1.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2012-02-07; dateUnrestricted=2012-11-07; subId=4061; geoSampleAccession=GSM897082; labExpId=LID44464; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapPlusRawRep1; type=bigWig; md5sum=e9ef426eecda2c6a0be73caea68c25e5; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4114; geoSampleAccession=GSM897082; labExpId=LID44465; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapPlusRawRep2; type=bigWig; md5sum=2feb41f0343a89875d9ee47cdca3bf24; size=1.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2012-02-07; dateUnrestricted=2012-11-07; subId=4061; geoSampleAccession=GSM897082; labExpId=LID44464; bioRep=013C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=88abb3392192592ea8ce04dabd9eb221; size=1011M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4114; geoSampleAccession=GSM897082; labExpId=LID44465; bioRep=014C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=0372280ee4eb82e8bb753b44c4abba35; size=806M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7258; geoSampleAccession=GSM897082; labExpId=LID44464; bioRep=013C; labProtocolId=013Cs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=8002ee8c87f453b48c294ace5b81f5e2; size=210K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2CytosolTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001743; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7235; geoSampleAccession=GSM897082; labExpId=LID44465; bioRep=014C; labProtocolId=014Cs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=564728c6107bda064b91f1a78e9b5d98; size=207K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4112; labExpId=LID44462; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep1; type=bam; md5sum=2a8762293f390f29085bb94f0e159d49; size=899M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4112; labExpId=LID44462; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep1; type=bai; md5sum=c295404effc2bab97c0db00fbb7124a1; size=3.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4113; labExpId=LID44463; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep2; type=bam; md5sum=d65830bc54ac0f261b7ec07a8e88c387; size=792M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4113; labExpId=LID44463; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapAlnRep2; type=bai; md5sum=f3d2fc0a6479e1f260cbc1e12054974d; size=3.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4480; geoSampleAccession=GSM897085; labExpId=LID44462,LID44463; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapContigs; type=bedRnaElements; md5sum=f1243aee2df502cd7ec8b177ba94e5c0; size=206K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4480; geoSampleAccession=GSM897085; labExpId=LID44462,LID44463; bioRep=013N,014N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=9d4e5af3ce150589f057ec364acd3a7f; size=612K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4112; geoSampleAccession=GSM897085; labExpId=LID44462; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapMinusRawRep1; type=bigWig; md5sum=87689296b73fc06cd51a39ed3e13fb94; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4113; geoSampleAccession=GSM897085; labExpId=LID44463; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapMinusRawRep2; type=bigWig; md5sum=1b5cbf9623e430913ce6c94db289678b; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4112; geoSampleAccession=GSM897085; labExpId=LID44462; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapPlusRawRep1; type=bigWig; md5sum=632aac93ee1e44aecbabc12d776d26e8; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4113; geoSampleAccession=GSM897085; labExpId=LID44463; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapPlusRawRep2; type=bigWig; md5sum=e8ef9d3c0e235ab7a474942ea84a98fa; size=1.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4112; geoSampleAccession=GSM897085; labExpId=LID44462; bioRep=013N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=fd75364af617356e54ee4dbe7cba2538; size=998M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2011-05-13; dateUnrestricted=2012-02-13; subId=4113; geoSampleAccession=GSM897085; labExpId=LID44463; bioRep=014N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=ba8f88267ed0a03db07ffcd1b8f7d68c; size=891M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7220; geoSampleAccession=GSM897085; labExpId=LID44462; bioRep=013N; labProtocolId=013Ns; seqPlatform=Illumina_GA2x; type=pdf; md5sum=0d2ad9c66c84a034e88b596dc4fa7872; size=221K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHepg2NucleusTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HepG2; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001742; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7240; geoSampleAccession=GSM897085; labExpId=LID44463; bioRep=014N; labProtocolId=014Ns; seqPlatform=Illumina_GA2x; type=pdf; md5sum=a897d97347e3a22bb3791ae8fc35fe85; size=220K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01005032CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5952; labExpId=LID47478; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01005032CellTapAlnRep2; type=bam; md5sum=3e06024a1e54526fa6592348e48557b4; size=9.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01005032CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5952; labExpId=LID47478; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01005032CellTapAlnRep2; type=bai; md5sum=552ad20a450e29063f8e3db4161c6306; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01005032CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5952; geoSampleAccession=GSM977038; labExpId=LID47478; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01005032CellTapMinusRep2; type=bigWig; md5sum=919d5c4c1b3d1cf13e1e97f99864237c; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01005032CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5952; geoSampleAccession=GSM977038; labExpId=LID47478; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01005032CellTapPlusRep2; type=bigWig; md5sum=7f7b1d538a99d01d920cafb20481c4ab; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01005032CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5952; geoSampleAccession=GSM977038; labExpId=LID47478; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=dc68c1ff47c520f3b05cdc8ff3eb41d4; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01027033CellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5946; labExpId=LID47477; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01027033CellTapAlnRep1; type=bam; md5sum=d46386a0759fa8256e553bb04323ba4e; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01027033CellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5946; labExpId=LID47477; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01027033CellTapAlnRep1; type=bai; md5sum=8067621dbcdc065b4dcd2263c08d5a20; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01027033CellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5946; geoSampleAccession=GSM977038; labExpId=LID47477; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01027033CellTapMinusRep1; type=bigWig; md5sum=1478cf68b60ccdfd1c8014676c881ef5; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01027033CellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5946; geoSampleAccession=GSM977038; labExpId=LID47477; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpc01027033CellTapPlusRep1; type=bigWig; md5sum=0c386bdf6f8fb13139ceac17ef5936c1; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpc01027033CellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5946; geoSampleAccession=GSM977038; labExpId=LID47477; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=729a698fb0d2bd942e569a16f3ca74c8; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpcCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0102703.3,0100503.2; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6852; geoSampleAccession=GSM977038; labExpId=LID47477,LID47478; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHfdpcCellTapContigs; type=bedRnaElements; md5sum=143ca0ff0ccc9ca2f70846c6972b053f; size=576K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpcCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0102703.3,0100503.2; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6832; geoSampleAccession=GSM977038; labExpId=LID47477,LID47478; bioRep=061WC,062WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=96eb58f003f71283448399d23a967461; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpcCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102703.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7175; geoSampleAccession=GSM977038; labExpId=LID47477; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=a2fb4855c6e2d3ba1c26fe388eb10807; size=267K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHfdpcCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HFDPC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0100503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002887; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7168; geoSampleAccession=GSM977038; labExpId=LID47478; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=37fce0bcd20310d292acff0028042989; size=263K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6096; labExpId=LID47657; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmepcCellTapAlnRep1; type=bam; md5sum=4ece10a3ae64b5238e86ffdcdb2328b5; size=5.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6096; labExpId=LID47657; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmepcCellTapAlnRep1; type=bai; md5sum=ca2be31cdef0289333a3e94051308a2b; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6022801.3; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6820; geoSampleAccession=GSM977050; labExpId=LID47657; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmepcCellTapContigs; type=bedRnaElements; md5sum=33adc0c65a5bfb92172931f387359e7a; size=3.2M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6022801.3; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6822; geoSampleAccession=GSM977050; labExpId=LID47657; bioRep=063WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=fab8f213ea0b075f961eb5a721ea47e2; size=766K; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6096; geoSampleAccession=GSM977050; labExpId=LID47657; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmepcCellTapMinusRep1; type=bigWig; md5sum=4315ce3470243c77a93964251534542e; size=8.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6096; geoSampleAccession=GSM977050; labExpId=LID47657; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmepcCellTapPlusRep1; type=bigWig; md5sum=e2be16eba3a2350e11280a9d7b83cc3f; size=8.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7170; geoSampleAccession=GSM977050; labExpId=LID47657; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=58c7e3ca8af7f230ac0923f682622c36; size=156K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmepcCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HMEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002890; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6096; geoSampleAccession=GSM977050; labExpId=LID47657; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=473cf82a9118b1cf90ad3c06bd676d17; size=5.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat010260412CellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5951; labExpId=LID47479; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat010260412CellTapAlnRep1; type=bam; md5sum=f00002b4512a672d55aee0e1bc530949; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat010260412CellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5951; labExpId=LID47479; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat010260412CellTapAlnRep1; type=bai; md5sum=4825dd0322e3e04fb789247946f837b0; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat010260412CellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5951; geoSampleAccession=GSM977041; labExpId=LID47479; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat010260412CellTapMinusRep1; type=bigWig; md5sum=d13f0bf754437a950a0970ed52add9e9; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat010260412CellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5951; geoSampleAccession=GSM977041; labExpId=LID47479; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat010260412CellTapPlusRep1; type=bigWig; md5sum=8d54bc735878eccdf89510e193b60703; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat010260412CellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5951; geoSampleAccession=GSM977041; labExpId=LID47479; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0f43d818b0eec86797f1a3e476ad82b1; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat906160112CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5949; labExpId=LID47480; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat906160112CellTapAlnRep2; type=bam; md5sum=aa9a42d88e8bbd5e8cb503bdf431a4ed; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat906160112CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5949; labExpId=LID47480; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat906160112CellTapAlnRep2; type=bai; md5sum=38d24972cc1d0184e1da1d0084f230c1; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat906160112CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5949; geoSampleAccession=GSM977041; labExpId=LID47480; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat906160112CellTapMinusRep2; type=bigWig; md5sum=37c0f24dc798b6593e9b55e70d25254d; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat906160112CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5949; geoSampleAccession=GSM977041; labExpId=LID47480; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscat906160112CellTapPlusRep2; type=bigWig; md5sum=72d34378bec3e5015a7a6000fbf61d05; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscat906160112CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5949; geoSampleAccession=GSM977041; labExpId=LID47480; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c4fb7a3ab267d603ce20c3a297130210; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscatCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6493; geoSampleAccession=GSM977041; labExpId=LID47479,LID47480; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscatCellTapContigs; type=bedRnaElements; md5sum=4f07718ad83333db0bb63111568bad39; size=899K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscatCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6751; geoSampleAccession=GSM977041; labExpId=LID47479,LID47480; bioRep=065WC,066WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=6cf618df5a49a1e06eedef9abc0a3f81; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscatCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0102604.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7157; geoSampleAccession=GSM977041; labExpId=LID47479; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=663f9ece437a2c89a9eded8627b3a1c7; size=264K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscatCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-AT; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9061601.12; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002888; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7144; geoSampleAccession=GSM977041; labExpId=LID47480; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=70c623f212660b33f6d7ce0bdef8dbf3; size=275K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7131; labExpId=LID47658; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep1; type=bam; md5sum=e304ea0fdbe323d19de163fcc55c9ca0; size=29G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7131; labExpId=LID47658; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep1; type=bai; md5sum=70538d6b6d1ec100d496c9d956f17e17; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7129; labExpId=LID47659; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep2; type=bam; md5sum=cd56090877f4686a3abdc29045c787c7; size=34G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7129; labExpId=LID47659; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapAlnRep2; type=bai; md5sum=dfa4f063dc4aba3a90e210e34fab5cec; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7127; geoSampleAccession=GSM977028; labExpId=LID47658,LID47659; bioRep=067WC,068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapContigs; type=bedRnaElements; md5sum=ebd747c1326eaec03f95b9cff4eee80d; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0051105.11,0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7127; geoSampleAccession=GSM977028; labExpId=LID47658,LID47659; bioRep=067WC,068WC; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=294d34c955c5ac7cb07600a562caddee; size=2.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7131; geoSampleAccession=GSM977028; labExpId=LID47658; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapMinusRawRep1; type=bigWig; md5sum=3aedf8ff8805d9a396f70aca2db10406; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7129; geoSampleAccession=GSM977028; labExpId=LID47659; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapMinusRawRep2; type=bigWig; md5sum=51b831860d265c370962291b0e2fb300; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7131; geoSampleAccession=GSM977028; labExpId=LID47658; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapPlusRawRep1; type=bigWig; md5sum=5dc388a3016ceb19bfb0f1cd56645088; size=8.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7129; geoSampleAccession=GSM977028; labExpId=LID47659; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscbmCellTapPlusRawRep2; type=bigWig; md5sum=589b3a3e6e27175790f26a26a3b21c95; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7171; geoSampleAccession=GSM977028; labExpId=LID47658; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=4c495841edace5faaddde083c61d684c; size=156K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7151; geoSampleAccession=GSM977028; labExpId=LID47659; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=88c6c3fc33a4dc29b48b93e55cf53aa0; size=159K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0051105.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7131; geoSampleAccession=GSM977028; labExpId=LID47658; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4d2f0201d37a4f204aa958953adb1432; size=24G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscbmCellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=hMSC-BM; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0050602.11; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002946; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7129; geoSampleAccession=GSM977028; labExpId=LID47659; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=388de35a26759b5f94fb2ed7ccfeb13e; size=28G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6094; labExpId=LID47515; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep1; type=bam; md5sum=06281ca6f2b5b56808364ce05e3f7465; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6094; labExpId=LID47515; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep1; type=bai; md5sum=e7bafe14dc6d866a307faf5666857fff; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6089; labExpId=LID47516; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep2; type=bam; md5sum=266cecdfaf0c6222a1204e1305020c0c; size=23G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6089; labExpId=LID47516; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapAlnRep2; type=bai; md5sum=1fefcd037d9fb3f38a683016cdc29c53; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6492; geoSampleAccession=GSM977048; labExpId=LID47515,LID47516; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapContigs; type=bedRnaElements; md5sum=cba62530f8941cc31625ca4ddf028b77; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6750; geoSampleAccession=GSM977048; labExpId=LID47515,LID47516; bioRep=069WC,070WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=7b0ae51269d32402f0927363fd54b9d3; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6094; geoSampleAccession=GSM977048; labExpId=LID47515; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapMinusRep1; type=bigWig; md5sum=43b097a9f2556dcecdaff5cfca70716e; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6089; geoSampleAccession=GSM977048; labExpId=LID47516; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapMinusRep2; type=bigWig; md5sum=85baa92679bae9b665524be3f8ed6718; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6094; geoSampleAccession=GSM977048; labExpId=LID47515; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapPlusRep1; type=bigWig; md5sum=8a8204554e8af4981221c5bac0e17e80; size=8.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6089; geoSampleAccession=GSM977048; labExpId=LID47516; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHmscucCellTapPlusRep2; type=bigWig; md5sum=ac4f87903bb5f4a567c58ccef17dea5c; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0052501.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7165; geoSampleAccession=GSM977048; labExpId=LID47515; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=78373963fd5eeee1caa3cd3c202f102d; size=277K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0081101.7; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7142; geoSampleAccession=GSM977048; labExpId=LID47516; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=78736524f747600644da84c12cd40939; size=281K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6094; geoSampleAccession=GSM977048; labExpId=LID47515; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d863531eab7c8ae0679d7f8d98e38237; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHmscucCellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=hMSC-UC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002896; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6089; geoSampleAccession=GSM977048; labExpId=LID47516; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=97d9c67f414b6437bcd1286a8056980f; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5929; labExpId=LID47432; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapAlnRep2; type=bam; md5sum=d12a7f1d12af2a4d8ed8e0343adc0438; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5929; labExpId=LID47432; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapAlnRep2; type=bai; md5sum=d973b9ff94f450e1a18b4aa817657c53; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5929; geoSampleAccession=GSM977036; labExpId=LID47432; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapMinusRep2; type=bigWig; md5sum=577a1093853b0ba03e38a93fc796516d; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5929; geoSampleAccession=GSM977036; labExpId=LID47432; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapPlusRep2; type=bigWig; md5sum=6a80c3748e64afe8f9d5232761123ba8; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHob00902021CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5929; geoSampleAccession=GSM977036; labExpId=LID47432; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=577475229a308013b00c7ee5d8fb23a6; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7128; labExpId=LID47431; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHobCellTapAlnRep1; type=bam; md5sum=b097e8ec7155e90b39e393c4fb56c052; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7128; labExpId=LID47431; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHobCellTapAlnRep1; type=bai; md5sum=8ccfa765ab5abddc8c72ba37ff228586; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7130; geoSampleAccession=GSM977036; labExpId=LID47431,LID47432; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHobCellTapContigs; type=bedRnaElements; md5sum=d258fc66eea1ed65da45eb556f39771c; size=785K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0091301,0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7130; geoSampleAccession=GSM977036; labExpId=LID47431,LID47432; bioRep=053WC,054WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=a79d842de71c9346da58609fe6fdc5b2; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7128; geoSampleAccession=GSM977036; labExpId=LID47431; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHobCellTapMinusRawRep1; type=bigWig; md5sum=fe9374f1038a2fff34a5389601dc53e7; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7128; geoSampleAccession=GSM977036; labExpId=LID47431; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHobCellTapPlusRawRep1; type=bigWig; md5sum=03ba3c025249c1251c30d8edbeb8f49d; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7146; geoSampleAccession=GSM977036; labExpId=LID47431; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=911754e484c7a4c0baa74645f5110b98; size=219K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0090202.1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7177; geoSampleAccession=GSM977036; labExpId=LID47432; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=1d49496764d0745e4bb4dc98c186c40f; size=215K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHobCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HOB; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0091301; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002881; dateSubmitted=2012-06-26; dateUnrestricted=2013-03-26; subId=7128; geoSampleAccession=GSM977036; labExpId=LID47431; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=018b744a68472ba3fd64250811087886; size=3.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6101; labExpId=LID47517; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep1; type=bam; md5sum=06329499f5032fe154177b0f295271b4; size=21G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6101; labExpId=LID47517; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep1; type=bai; md5sum=871ae6c25cac9a9526ccb3e55f2b3e6d; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6095; labExpId=LID47518; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep2; type=bam; md5sum=1bbbf36d2b7295290b9810ce08772205; size=29G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6095; labExpId=LID47518; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapAlnRep2; type=bai; md5sum=fcd83f83425972d3f36c42ab7215918b; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0101504.13,0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6510; geoSampleAccession=GSM977049; labExpId=LID47517,LID47518; bioRep=071WC,072WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapContigs; type=bedRnaElements; md5sum=983884cefa9fd5d98e44396a6e4b60e9; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0101504.13,0032601.13; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6827; geoSampleAccession=GSM977049; labExpId=LID47517,LID47518; bioRep=071WC,072WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=a8607da302c08d4fbba3f1db13e32933; size=3.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6101; geoSampleAccession=GSM977049; labExpId=LID47517; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapMinusRep1; type=bigWig; md5sum=7a8991c3e9ff8637f347df20c4d7d242; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6095; geoSampleAccession=GSM977049; labExpId=LID47518; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapMinusRep2; type=bigWig; md5sum=4dc6e69703e1f84023964a794a6a0ea2; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6101; geoSampleAccession=GSM977049; labExpId=LID47517; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapPlusRep1; type=bigWig; md5sum=45cd172a9cdbab8c0460b2a76488ebeb; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6095; geoSampleAccession=GSM977049; labExpId=LID47518; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpcplCellTapPlusRep2; type=bigWig; md5sum=d1070d5b639bfa3765cf32cdc03c9f94; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0101504.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7154; geoSampleAccession=GSM977049; labExpId=LID47517; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=3b1bc97ad5765ada06f1bacc8eb19a10; size=281K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0032601.13; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7167; geoSampleAccession=GSM977049; labExpId=LID47518; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=fe5f489cc7ddaf6bad2296375defe41d; size=286K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6101; geoSampleAccession=GSM977049; labExpId=LID47517; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0a627b12917b1cabda3a9fc671a57f3b; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpcplCellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HPC-PL; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002891; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6095; geoSampleAccession=GSM977049; labExpId=LID47518; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f852dd82580a0db99589a34171535af6; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6099; labExpId=LID47519; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep1; type=bam; md5sum=86af7baa4047fc3b3e97aacea6c63b07; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6099; labExpId=LID47519; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep1; type=bai; md5sum=a8b24d416d3086e9adaa8443458c74b6; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6092; labExpId=LID47520; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep2; type=bam; md5sum=983af9ab7ec8a8ac22e2b52f8ae706b6; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6092; labExpId=LID47520; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapAlnRep2; type=bai; md5sum=f2933ef915557f5c47e3516651771501; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=9041503.2,9012801.2; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6847; geoSampleAccession=GSM977052; labExpId=LID47519,LID47520; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapContigs; type=bedRnaElements; md5sum=28fe9754e585f80f318622c32f6e7caa; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6767; geoSampleAccession=GSM977052; labExpId=LID47519,LID47520; bioRep=073WC,074WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=3fa8a9f9fee0ef8b3f81e4b93aa21da4; size=2.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6099; geoSampleAccession=GSM977052; labExpId=LID47519; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapMinusRep1; type=bigWig; md5sum=5a2a8e9c53dccca953618d83fd9672a4; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6092; geoSampleAccession=GSM977052; labExpId=LID47520; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapMinusRep2; type=bigWig; md5sum=33a72ef46a0858fa267b849ecbc20644; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6099; geoSampleAccession=GSM977052; labExpId=LID47519; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapPlusRep1; type=bigWig; md5sum=0640f247e3eae472ce52b08117a78104; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6092; geoSampleAccession=GSM977052; labExpId=LID47520; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHpiepcCellTapPlusRep2; type=bigWig; md5sum=9bcbf56d2a7c1f684ce25e846e6b82a8; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9041503.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7150; geoSampleAccession=GSM977052; labExpId=LID47519; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=b028baafb729d374c33c2273aed6868e; size=284K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9012801.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7163; geoSampleAccession=GSM977052; labExpId=LID47520; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=f2cd5d42023d8f89f2f5abf60c9902d8; size=280K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6099; geoSampleAccession=GSM977052; labExpId=LID47519; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=18cc8889c919ee4ce01df032a3f96b80; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHpiepcCellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HPIEpC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002892; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6092; geoSampleAccession=GSM977052; labExpId=LID47520; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=8f8cd5a826fe2401788a3e46f746aab0; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6098; labExpId=LID47615; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep1; type=bam; md5sum=4256a032e1f2d4542692758e8d72b811; size=18G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6098; labExpId=LID47615; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep1; type=bai; md5sum=f2fe0bb1067ff3168beb4aff7a4616ee; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6091; labExpId=LID47616; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep2; type=bam; md5sum=40e5991254cfa1692b35ef3b9f15e19d; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6091; labExpId=LID47616; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapAlnRep2; type=bai; md5sum=ff59dac0eff09b530a8543569f1fec88; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0022202.16,9100101.15; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6857; geoSampleAccession=GSM977051; labExpId=LID47615,LID47616; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapContigs; type=bedRnaElements; md5sum=af93b4cf131c4513860d82edb99520d5; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=0022202.16,9100101.15; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6835; geoSampleAccession=GSM977051; labExpId=LID47615,LID47616; bioRep=093WC,094WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=d4634093ce07424f2d23775e5768ff7c; size=2.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6098; geoSampleAccession=GSM977051; labExpId=LID47615; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapMinusRep1; type=bigWig; md5sum=52aac62651038c4af3a47ecb026aa8fb; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6091; geoSampleAccession=GSM977051; labExpId=LID47616; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapMinusRep2; type=bigWig; md5sum=21c5d8a6b887b759c06aefcc927f45b6; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6098; geoSampleAccession=GSM977051; labExpId=LID47615; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapPlusRep1; type=bigWig; md5sum=3815a471013b774232623eb1b95916d0; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6091; geoSampleAccession=GSM977051; labExpId=LID47616; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHsavecCellTapPlusRep2; type=bigWig; md5sum=2e5d8c9f448af03ff0244b651e60e0fb; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0022202.16; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7176; geoSampleAccession=GSM977051; labExpId=LID47615; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=58cc4d8e31ea3f7e455b7a3e5e1669f8; size=270K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9100101.15; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7143; geoSampleAccession=GSM977051; labExpId=LID47616; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=8ecdb6f5a4b38f049470010abed7b714; size=271K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6098; geoSampleAccession=GSM977051; labExpId=LID47615; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=00e98883ac8a36502d5d54434994268d; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHsavecCellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HSaVEC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002893; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6091; geoSampleAccession=GSM977051; labExpId=LID47616; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=e1618bd2c4d5f89b548363d06db5c320; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3362; labExpId=LID21056; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep3; type=bam; md5sum=ff04ccf2cac390a81fc9f7c1275a96b8; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3362; labExpId=LID21056; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep3; type=bai; md5sum=0f947831315ddd98fb5cc331d0c861bf; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3295; labExpId=LID21058; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep4; type=bam; md5sum=b6a9fba1306499191fe7e562b833c210; size=832M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3295; labExpId=LID21058; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapAlnRep4; type=bai; md5sum=932c7e5c98573a9b47b6a770f595adfb; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4475; geoSampleAccession=GSM897075; labExpId=LID21056,LID21058; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapContigs; type=bedRnaElements; md5sum=9e2a283ebb77a8685de4a3b0cea95c75; size=2.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4475; geoSampleAccession=GSM897075; labExpId=LID21056,LID21058; bioRep=029N,030N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=672a54c83780a160aa72362283199787; size=2.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3362; geoSampleAccession=GSM897075; labExpId=LID21056; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapMinusRawRep3; type=bigWig; md5sum=913765bad3c1e58374276d7d92df8b9d; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3295; geoSampleAccession=GSM897075; labExpId=LID21058; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapMinusRawRep4; type=bigWig; md5sum=6f39e198619849b089e6b55c0148216d; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3362; geoSampleAccession=GSM897075; labExpId=LID21056; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapPlusRawRep3; type=bigWig; md5sum=d8f28309df9602dfc7ee609aab5cdeb8; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3295; geoSampleAccession=GSM897075; labExpId=LID21058; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapPlusRawRep4; type=bigWig; md5sum=c47a34ff4661284ee45b9251d607ba1b; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5702; geoSampleAccession=GSM897075; labExpId=LID21056; bioRep=029N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=e572f81f55c3ca0419a023bd438bc6c4; size=326K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5694; geoSampleAccession=GSM897075; labExpId=LID21058; bioRep=030N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=64068fd361ad8d0d2169f3b43dbed7bb; size=326K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3362; geoSampleAccession=GSM897075; labExpId=LID21056; bioRep=029N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=0d6d12b60fc88da597f8f014403b4305; size=942M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHuvecNucleusShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HUVEC; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001080; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3295; geoSampleAccession=GSM897075; labExpId=LID21058; bioRep=030N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=8b41b3ed8cc82e0b580024787b734b5b; size=748M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5924; labExpId=LID47243; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapAlnRep1; type=bam; md5sum=363cdc8643ca448688a0bdf4806d91f6; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5924; labExpId=LID47243; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapAlnRep1; type=bai; md5sum=40c70d12032ba0f126f93576950925ba; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5924; geoSampleAccession=GSM977033; labExpId=LID47243; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapMinusRep1; type=bigWig; md5sum=39b929cd5922248e72cc7b6cd10e867a; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5924; geoSampleAccession=GSM977033; labExpId=LID47243; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapPlusRep1; type=bigWig; md5sum=eb3b3825f67a1f147459945ca839b680; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf60912033CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5924; geoSampleAccession=GSM977033; labExpId=LID47243; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a6193f2055b4365275d2ada0b7c7e704; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5927; labExpId=LID47244; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapAlnRep2; type=bam; md5sum=f0b7b3a6620fbe37ae95473e3c8cd037; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5927; labExpId=LID47244; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapAlnRep2; type=bai; md5sum=b6cb881ea6105d947f9f3ccedcc0bd0e; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5927; geoSampleAccession=GSM977033; labExpId=LID47244; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapMinusRep2; type=bigWig; md5sum=0b204d3fef8d4da986d93214d47fa2a7; size=8.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5927; geoSampleAccession=GSM977033; labExpId=LID47244; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapPlusRep2; type=bigWig; md5sum=26cfed8d027f52adcbec864ff282fbaf; size=8.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmf61004013CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5927; geoSampleAccession=GSM977033; labExpId=LID47244; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d10fe6bd27537ae91015c835ffbb2a0a; size=7.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmfCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6495; geoSampleAccession=GSM977033; labExpId=LID47243,LID47244; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHvmfCellTapContigs; type=bedRnaElements; md5sum=a0ed93233f764da86b867254368e7b4d; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmfCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6753; geoSampleAccession=GSM977033; labExpId=LID47243,LID47244; bioRep=051WC,052WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=9391d6262f88b2129f7e395de62f350a; size=2.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmfCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6091203.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7147; geoSampleAccession=GSM977033; labExpId=LID47243; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=06b61b3a1cba5d450322ba5cd55d4b1e; size=279K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHvmfCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HVMF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=6100401.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002882; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7149; geoSampleAccession=GSM977033; labExpId=LID47244; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=b958c13909a81c1add660e0f64aae385; size=290K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6088; labExpId=LID47609; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapAlnRep1; type=bam; md5sum=85d271d6fe6683654389813e094a7fa3; size=23G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6088; labExpId=LID47609; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapAlnRep1; type=bai; md5sum=109eb24e1dec4633cbc13fe44a44518d; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6090; labExpId=LID47610; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapAlnRep2; type=bam; md5sum=2dad3eec35aa5baca396c33d8a055369; size=20G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6090; labExpId=LID47610; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapAlnRep2; type=bai; md5sum=f0bd8560f288440483f5353935b949d2; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=8120201.5,0092205; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6851; geoSampleAccession=GSM977046; labExpId=LID47609,LID47610; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapContigs; type=bedRnaElements; md5sum=76fae557dbcd6306310ca390b5969015; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=8120201.5,0092205; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6831; geoSampleAccession=GSM977046; labExpId=LID47609,LID47610; bioRep=079WC,080WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=a43955caac819c21036f44be4b48e7a5; size=2.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6088; geoSampleAccession=GSM977046; labExpId=LID47609; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapMinusRep1; type=bigWig; md5sum=ba8e50d252bb73537cfbd26fe581773a; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6090; geoSampleAccession=GSM977046; labExpId=LID47610; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapMinusRep2; type=bigWig; md5sum=d223fd1ae30d96e00b0429558c66e6b3; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6088; geoSampleAccession=GSM977046; labExpId=LID47609; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapPlusRep1; type=bigWig; md5sum=a338f7b86da2556e20eee80b00a1536b; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6090; geoSampleAccession=GSM977046; labExpId=LID47610; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqHwpCellTapPlusRep2; type=bigWig; md5sum=e5e06db9ede8c9eb4e03d550f0ee9d25; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=8120201.5; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7141; geoSampleAccession=GSM977046; labExpId=LID47609; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=f99581aaa9eacb8bb2f705342b5a8748; size=262K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0092205; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7161; geoSampleAccession=GSM977046; labExpId=LID47610; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=827deb4cb15be99bc1f34a0587f40303; size=257K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6088; geoSampleAccession=GSM977046; labExpId=LID47609; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=dd8dc241e4f2d4f8a38d87f7436bad60; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqHwpCellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=HWP; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002894; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6090; geoSampleAccession=GSM977046; labExpId=LID47610; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5f5f9104ecf48b967641c2e3d9f29040; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6508; geoSampleAccession=GSM973693; labExpId=LID45108,LID45111; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellCiptapContigs; type=bedRnaElements; md5sum=36cfb64eee3674c1231980d656e99c22; size=522K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6765; geoSampleAccession=GSM973693; labExpId=LID45108,LID45111; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=4151b7417f178bde0dd41e46171e11a6; size=673K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6517; geoSampleAccession=GSM973691; labExpId=LID45107,LID45110; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellContigs; type=bedRnaElements; md5sum=ec75957d75cdcccc6d1ab8dcd7a0c520; size=683K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6774; geoSampleAccession=GSM973691; labExpId=LID45107,LID45110; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=83c96497370c0bf9c9c99f1d95f3ff60; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5843; labExpId=LID45107; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep1; type=bam; md5sum=5a9675efe6af57ff2918dd898fe786ab; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5843; labExpId=LID45107; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep1; type=bai; md5sum=08faac23a83c14eb89a85e66c5824ab6; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5844; labExpId=LID45110; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep2; type=bam; md5sum=46e7efa6281b84551a9046c8f96cffa3; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5844; labExpId=LID45110; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalAlnRep2; type=bai; md5sum=b5ee38bb159e36a073359e71514ede38; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5838; labExpId=LID45108; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep1; type=bam; md5sum=c65cc3a4be05080ce90c384d490e6fed; size=17G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5838; labExpId=LID45108; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep1; type=bai; md5sum=cfcc5159e61ee3f59e7c3b2bfefb5a4d; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5833; labExpId=LID45111; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep2; type=bam; md5sum=5bdc4511dada4aad2f052224295c2d43; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5833; labExpId=LID45111; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapAlnRep2; type=bai; md5sum=072bd4a0b69d3324e87311bef3b7ecae; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5838; geoSampleAccession=GSM973693; labExpId=LID45108; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapMinusRep1; type=bigWig; md5sum=346f9f93fe714e7c23bfeb495acc7c36; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5833; geoSampleAccession=GSM973693; labExpId=LID45111; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapMinusRep2; type=bigWig; md5sum=3f411bcf80a4b02fa296c81bf4df7559; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5838; geoSampleAccession=GSM973693; labExpId=LID45108; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapPlusRep1; type=bigWig; md5sum=abb4f6e23af34c4025ea6ebcdbf16ce0; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5833; geoSampleAccession=GSM973693; labExpId=LID45111; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapPlusRep2; type=bigWig; md5sum=d96fdd201507d53ebcaabe0ce2414047; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5838; geoSampleAccession=GSM973693; labExpId=LID45108; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5c26ea74e8e3f06d251e52881ba4c7d5; size=5.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalCiptapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002621; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5833; geoSampleAccession=GSM973693; labExpId=LID45111; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=31a72a43d342906580238e2ca2d3c14d; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5843; geoSampleAccession=GSM973691; labExpId=LID45107; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalMinusRep1; type=bigWig; md5sum=0a53df820cd680a45213965538dfe81e; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5844; geoSampleAccession=GSM973691; labExpId=LID45110; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalMinusRep2; type=bigWig; md5sum=d4a092b7af0e0ce50be8f9feec03b655; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5843; geoSampleAccession=GSM973691; labExpId=LID45107; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalPlusRep1; type=bigWig; md5sum=b683f245aee0b34b1794b75de2c83874; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5844; geoSampleAccession=GSM973691; labExpId=LID45110; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalPlusRep2; type=bigWig; md5sum=e9bfc5d75e3fa4d462c1bb74bec2bc42; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5843; geoSampleAccession=GSM973691; labExpId=LID45107; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5e78ed6e307404648adb5dd57dc4f807; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002620; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5844; geoSampleAccession=GSM973691; labExpId=LID45110; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=7fb20f0b8538a0fe434233c3c7922162; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5922; labExpId=LID47262; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep1; type=bam; md5sum=958da5207e787c689ec44c8ea0594d8a; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5922; labExpId=LID47262; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep1; type=bai; md5sum=b23113ed48f4850c76d20278f6028d42; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5939; labExpId=LID47263; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep2; type=bam; md5sum=e35d4d675ec1cf51de25c753e1618ebf; size=9.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5939; labExpId=LID47263; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapAlnRep2; type=bai; md5sum=5ae946a979c9f79927bab7d83a57b01d; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5922; geoSampleAccession=GSM973680; labExpId=LID47262; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapMinusRep1; type=bigWig; md5sum=5159e6a92addbf036f68c9f9c055f2f0; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5939; geoSampleAccession=GSM973680; labExpId=LID47263; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapMinusRep2; type=bigWig; md5sum=95857eaa9ef93c8b3a5a1ec6f7b864f3; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5922; geoSampleAccession=GSM973680; labExpId=LID47262; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapPlusRep1; type=bigWig; md5sum=214fbeb93a04c16e6da45d7c30eeaf0e; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5939; geoSampleAccession=GSM973680; labExpId=LID47263; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellShorttotalTapPlusRep2; type=bigWig; md5sum=b110b5753a82006f16335872842827f5; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5634; geoSampleAccession=GSM973680; labExpId=LID47262; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d95d08c90623f1ca4fa9a9ef9a88f2a8; size=149K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5646; geoSampleAccession=GSM973680; labExpId=LID47263; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=918d8365b0e49e64e3e93c2dfa92ce23; size=150K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5922; geoSampleAccession=GSM973680; labExpId=LID47262; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=81755c25a7511488f46c90da7c8926fa; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5939; geoSampleAccession=GSM973680; labExpId=LID47263; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=38c4a8cdcf4bab432b4b03d4dc9a4606; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6512; geoSampleAccession=GSM973680; labExpId=LID47262,LID47263; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CellTapContigs; type=bedRnaElements; md5sum=c5660d286a4bd532a0078f2c36d2cd91; size=962K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002465; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6769; geoSampleAccession=GSM973680; labExpId=LID47262,LID47263; bioRep=045WC,046WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=d10b183f79519d538e92047d02be65ef; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7263; geoSampleAccession=GSM973670; labExpId=LID45888,LID45889; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolCiptapContigs; type=bedRnaElements; md5sum=9b660146ca9cfda479d7767c18557298; size=598K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7263; geoSampleAccession=GSM973670; labExpId=LID45888,LID45889; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=3e327fc82282b1a03cf62598b6768a54; size=2.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolCiptapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7256; geoSampleAccession=GSM973670; labExpId=LID45888; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=00d8d748a111b6ad9e09a99de961516b; size=392K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolCiptapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7255; geoSampleAccession=GSM973670; labExpId=LID45889; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=3ac829ae1a65460d79717dfd43252b18; size=403K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=58607680; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6845; geoSampleAccession=GSM973671; labExpId=LID45957,LID45958; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolContigs; type=bedRnaElements; md5sum=6588bde5fc093823e1d970ccdfaba5d8; size=857K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6749; geoSampleAccession=GSM973671; labExpId=LID45957,LID45958; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=a835faabfed15d3f39f52a9eacb409a3; size=459K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7251; geoSampleAccession=GSM973671; labExpId=LID45957; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=95804e5946e2da2222b61be0eb6b2b0b; size=358K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7237; geoSampleAccession=GSM973671; labExpId=LID45958; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=3966efc09ed69d68689f63bf8390cc18; size=342K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5842; labExpId=LID45957; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep1; type=bam; md5sum=2ac8fc2489366145a5e4e24bb639d577; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5842; labExpId=LID45957; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep1; type=bai; md5sum=fd1b85fd4819a4729cb125dd77bfb542; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5828; labExpId=LID45958; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep2; type=bam; md5sum=8642fd77f697398ccd8e2dba2115a8e1; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5828; labExpId=LID45958; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalAlnRep2; type=bai; md5sum=a1f5c0b07027d46ab84fb781201e42a1; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5849; labExpId=LID45888; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep1; type=bam; md5sum=0f207d30c753a46129ffc1d78366dbf9; size=16G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5849; labExpId=LID45888; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep1; type=bai; md5sum=ae9c8065c0127164a2cc96ccf45f83a9; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5847; labExpId=LID45889; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep2; type=bam; md5sum=2dc1bd96984917845bd752c2badf5fdc; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5847; labExpId=LID45889; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapAlnRep2; type=bai; md5sum=2c41b0fd698afe6c0dd9ed2b8137c0a4; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5849; geoSampleAccession=GSM973670; labExpId=LID45888; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapMinusRep1; type=bigWig; md5sum=044367c1e72af39de210978f99a4862d; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5847; geoSampleAccession=GSM973670; labExpId=LID45889; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapMinusRep2; type=bigWig; md5sum=7b1739794e46614e7013830b836e242f; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5849; geoSampleAccession=GSM973670; labExpId=LID45888; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapPlusRep1; type=bigWig; md5sum=95bdbba7695d4a4644aad05fc159f767; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5847; geoSampleAccession=GSM973670; labExpId=LID45889; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapPlusRep2; type=bigWig; md5sum=dd6852882270abeace49a42a91559bdc; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5849; geoSampleAccession=GSM973670; labExpId=LID45888; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=275c5363f5885fcaf1d5b773e6cf3a2f; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalCiptapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002619; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5847; geoSampleAccession=GSM973670; labExpId=LID45889; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=df197efda87e4866182c9e2e1f8842b0; size=5.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5842; geoSampleAccession=GSM973671; labExpId=LID45957; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalMinusRep1; type=bigWig; md5sum=8a41726d15a08bf287b0f6a7542ee9b3; size=9.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5828; geoSampleAccession=GSM973671; labExpId=LID45958; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalMinusRep2; type=bigWig; md5sum=d7c45b1d84503fb5b978f5778993e96c; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5842; geoSampleAccession=GSM973671; labExpId=LID45957; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalPlusRep1; type=bigWig; md5sum=ce520a74fd1d56335671e6cde5408b44; size=9.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5828; geoSampleAccession=GSM973671; labExpId=LID45958; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalPlusRep2; type=bigWig; md5sum=8538feb3657842b107d671bf34eaa919; size=8.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5842; geoSampleAccession=GSM973671; labExpId=LID45957; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=00d7d69f2c2c4aa0810efef4d6cba3bc; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002618; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5828; geoSampleAccession=GSM973671; labExpId=LID45958; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c6f68b26b30030c88cf86458ab56ddaf; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5936; labExpId=LID47264; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep1; type=bam; md5sum=510089f6fc12b7679e35028400480409; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5936; labExpId=LID47264; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep1; type=bai; md5sum=c567c2e91cc290ac9b3a127129c6ec33; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5933; labExpId=LID47265; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep2; type=bam; md5sum=b0524a8a4b5b2345f73f0ee3a4f3b662; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5933; labExpId=LID47265; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapAlnRep2; type=bai; md5sum=cdcde698be8dd69f45e862e4d1721d1a; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5936; geoSampleAccession=GSM973686; labExpId=LID47264; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapMinusRep1; type=bigWig; md5sum=4896ede944325a4a42dd39ccbc4df23e; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5933; geoSampleAccession=GSM973686; labExpId=LID47265; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapMinusRep2; type=bigWig; md5sum=5f71b432e9b80a191ead7fd2d5bb7fda; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5936; geoSampleAccession=GSM973686; labExpId=LID47264; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapPlusRep1; type=bigWig; md5sum=165e3fa8f53bd4ba15730a66d6487747; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5933; geoSampleAccession=GSM973686; labExpId=LID47265; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapPlusRep2; type=bigWig; md5sum=1e3003e48bd310ebaa85de9bacd5a96d; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5644; geoSampleAccession=GSM973686; labExpId=LID47264; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=31511d1db02214ce12b910b2927c1e6e; size=153K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5642; geoSampleAccession=GSM973686; labExpId=LID47265; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=4aa26c833002e61608f607190231b303; size=153K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5936; geoSampleAccession=GSM973686; labExpId=LID47264; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f0aabf954e67a159f828e63aeb82f76e; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5933; geoSampleAccession=GSM973686; labExpId=LID47265; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b310a63092d32075f98fd55a8902b620; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6516; geoSampleAccession=GSM973686; labExpId=LID47264,LID47265; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90CytosolTapContigs; type=bedRnaElements; md5sum=cd0bb58e9df4635fcd1345508e6c9699; size=686K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90CytosolTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002463; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6772; geoSampleAccession=GSM973686; labExpId=LID47264,LID47265; bioRep=045C,046C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=ccf394006a90042a73881444578e0980; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6503; geoSampleAccession=GSM973673; labExpId=LID45886,LID45887; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusCiptapContigs; type=bedRnaElements; md5sum=95dc1b1ae6dfc3e460222fed005efe44; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6761; geoSampleAccession=GSM973673; labExpId=LID45886,LID45887; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=ac6823f29cf29dce5d5bf7aa2619c7bc; size=545K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusCiptapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7216; geoSampleAccession=GSM973673; labExpId=LID45886; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=5c30d76466b6a234c677991e5ac93470; size=464K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusCiptapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7209; geoSampleAccession=GSM973673; labExpId=LID45887; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=7a5efa7deb28579d99d83ed0e481f0ea; size=431K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6511; geoSampleAccession=GSM973678; labExpId=LID45955,LID45956; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusContigs; type=bedRnaElements; md5sum=37f4069d147e9944c13b258755037d79; size=867K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6768; geoSampleAccession=GSM973678; labExpId=LID45955,LID45956; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=3839be669ca3cae88fcde236adde1754; size=455K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7248; geoSampleAccession=GSM973678; labExpId=LID45955; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=fe2ec42a95d118dc10830528ee7de48f; size=386K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7221; geoSampleAccession=GSM973678; labExpId=LID45956; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=586923976c4c38cd36b0962036908988; size=372K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5836; labExpId=LID45955; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep1; type=bam; md5sum=505b010291955e76a7ec09bafc3aa629; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5836; labExpId=LID45955; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep1; type=bai; md5sum=178a2986d0e40af302211189ed9e1d86; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5811; labExpId=LID45956; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep2; type=bam; md5sum=2a31e248e8c68046327efd3d931fe192; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5811; labExpId=LID45956; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalAlnRep2; type=bai; md5sum=106d329bd4284854cdba80fdca6a953b; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5808; labExpId=LID45886; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep1; type=bam; md5sum=992c3fb944e429419db112ad8e4d22cf; size=15G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5808; labExpId=LID45886; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep1; type=bai; md5sum=0e1cbda8c7e37ac61cb9f51f1cbec4f3; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5800; labExpId=LID45887; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep2; type=bam; md5sum=f71f834c0e67ab3cac1bf351de2c3399; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5800; labExpId=LID45887; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapAlnRep2; type=bai; md5sum=1bc020338e0ce5a78bfeddaf620f5e83; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5808; geoSampleAccession=GSM973673; labExpId=LID45886; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapMinusRep1; type=bigWig; md5sum=3e264084bc9a72b71141ff708ba6777e; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5800; geoSampleAccession=GSM973673; labExpId=LID45887; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapMinusRep2; type=bigWig; md5sum=58dc8722ab57982f785594ecc7a98623; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5808; geoSampleAccession=GSM973673; labExpId=LID45886; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapPlusRep1; type=bigWig; md5sum=5ba44c579b4ca6c220509babe27ae3b4; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5800; geoSampleAccession=GSM973673; labExpId=LID45887; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapPlusRep2; type=bigWig; md5sum=c0baf2dd2e0131f5d38124028601005e; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5808; geoSampleAccession=GSM973673; labExpId=LID45886; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=9579612913e4435b6ac91991d0d5e990; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalCiptapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002605; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5800; geoSampleAccession=GSM973673; labExpId=LID45887; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d7d67f8a2d4fbce7143da67b15cf8eff; size=7.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5836; geoSampleAccession=GSM973678; labExpId=LID45955; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalMinusRep1; type=bigWig; md5sum=ec35c40516bddbc82d1aa22e3de92f8f; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5811; geoSampleAccession=GSM973678; labExpId=LID45956; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalMinusRep2; type=bigWig; md5sum=d96603816092b94d48f072529626672a; size=9.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5836; geoSampleAccession=GSM973678; labExpId=LID45955; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalPlusRep1; type=bigWig; md5sum=f52d06eeef7872122811f37a83c6788e; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5811; geoSampleAccession=GSM973678; labExpId=LID45956; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalPlusRep2; type=bigWig; md5sum=289f125dd31fffabd906fd8e02747474; size=9.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5836; geoSampleAccession=GSM973678; labExpId=LID45955; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b2bc42ad519c9075418cbd1dea64140d; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002606; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5811; geoSampleAccession=GSM973678; labExpId=LID45956; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ab362063912c03e3f17493a8789db0cf; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5931; labExpId=LID47266; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep1; type=bam; md5sum=91915e8edf32b5dc310ca5f3e816f519; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5931; labExpId=LID47266; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep1; type=bai; md5sum=31395901f4abd543c36a0964ad773145; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5954; labExpId=LID47267; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep2; type=bam; md5sum=c2731ca21157567db232977358595138; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5954; labExpId=LID47267; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapAlnRep2; type=bai; md5sum=4c0ae05c965cb6971b67da86263b9940; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5931; geoSampleAccession=GSM973679; labExpId=LID47266; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapMinusRep1; type=bigWig; md5sum=a1ea072579fe0e53c74e1c850362d0bb; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5954; geoSampleAccession=GSM973679; labExpId=LID47267; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapMinusRep2; type=bigWig; md5sum=68ca625292b765b19967a9d6daad5d7c; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5931; geoSampleAccession=GSM973679; labExpId=LID47266; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapPlusRep1; type=bigWig; md5sum=373258e93deef16ca6e9a77f8539744d; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5954; geoSampleAccession=GSM973679; labExpId=LID47267; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapPlusRep2; type=bigWig; md5sum=d7cd23fdddd5b47ed1ec15b67a191151; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5641; geoSampleAccession=GSM973679; labExpId=LID47266; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=7b23b2adb9f035f85fb533a95138faf7; size=155K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5654; geoSampleAccession=GSM973679; labExpId=LID47267; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=6aad3fc0406b340daef19ef682b975d7; size=154K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5931; geoSampleAccession=GSM973679; labExpId=LID47266; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=46e72f0dd5b931b210b9154e9fc06fd1; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5954; geoSampleAccession=GSM973679; labExpId=LID47267; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2eaf83a3128020276328e116c79bb4e5; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6506; geoSampleAccession=GSM973679; labExpId=LID47266,LID47267; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqImr90NucleusTapContigs; type=bedRnaElements; md5sum=38bbf1fd4547efabc6d55fe2d44f4a1d; size=860K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqImr90NucleusTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=IMR90; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=58607680; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002464; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6823; geoSampleAccession=GSM973679; labExpId=LID47266,LID47267; bioRep=045N,046N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=2a744a6ee6edc736ca280be0d15f0112; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1409; geoSampleAccession=GSM605630; labExpId=crg-31; bioRep=gen0130WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CellShortAln; type=bam; md5sum=b8b6d993a31cda4827f9cd23a9a4d618; size=41M; replicate=130; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1409; geoSampleAccession=GSM605630; labExpId=crg-31; bioRep=gen0130WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CellShortAln; type=bai; md5sum=2bd965ce0f4530b9f8871e0bb5527302; size=4.4M; replicate=130; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1409; geoSampleAccession=GSM605630; labExpId=crg-31; bioRep=gen0130WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CellShortMinusRaw; type=bigWig; md5sum=73ed2cc27b31565e7d403faa3ebd8231; size=17M; replicate=130; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1409; geoSampleAccession=GSM605630; labExpId=crg-31; bioRep=gen0130WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CellShortPlusRaw; type=bigWig; md5sum=f7c0d7ad646646320eaccc2e050b9123; size=17M; replicate=130; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-14; subId=1000; geoSampleAccession=GSM605630; labExpId=crg-31; bioRep=gen0130WC; labVersion=Produced by Hannon Lab; type=fastq; md5sum=27bd048de5ac571a226bbd3d83e529ff; size=1.9G; replicate=130; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=K562; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2010-01-14; dateResubmitted=2010-06-14; dateUnrestricted=2010-10-14; subId=1965; geoSampleAccession=GSM605630; labExpId=crg-31; bioRep=gen0130WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CellShortTransfrags; type=shortFrags; md5sum=4c1639afd2d6bfc017fb2acee07b60bf; size=1.9M; replicate=130; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3296; labExpId=LID10567; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep1; type=bam; md5sum=d43bf7295915a91092026ad2c0a8c2d2; size=571M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3296; labExpId=LID10567; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep1; type=bai; md5sum=90d2326e515e8e0b882c4bb39b295ecc; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3363; labExpId=LID10568; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep2; type=bam; md5sum=5d4da451d8fc41bf2c806919caa4815d; size=996M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3363; labExpId=LID10568; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapAlnRep2; type=bai; md5sum=9d5d82bc2a78122abef85683d433c199; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4468; geoSampleAccession=GSM605630; labExpId=LID10567,LID10568; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapContigs; type=bedRnaElements; md5sum=6b0e3670644af6daca8f6c2e57e336c8; size=357K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4468; geoSampleAccession=GSM605630; labExpId=LID10567,LID10568; bioRep=001WC,002WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=773dcf0d4702edfb17f2923a9a4afa33; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3296; geoSampleAccession=GSM605630; labExpId=LID10567; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapMinusRawRep1; type=bigWig; md5sum=18de869c0d45d10cf2be39b5736874d1; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3363; geoSampleAccession=GSM605630; labExpId=LID10568; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapMinusRawRep2; type=bigWig; md5sum=7ac3602b798a6d75ae6d9d0c8769a58b; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3296; geoSampleAccession=GSM605630; labExpId=LID10567; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapPlusRawRep1; type=bigWig; md5sum=f27465fd0c8028c871e1fac627391a7c; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3363; geoSampleAccession=GSM605630; labExpId=LID10568; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CellShorttotalTapPlusRawRep2; type=bigWig; md5sum=db0c5a6c5f60bc3125c55fa7bae88a13; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5705; geoSampleAccession=GSM605630; labExpId=LID10567; bioRep=001WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=7c62b99d1f374488238f3705f8103f18; size=276K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5689; geoSampleAccession=GSM605630; labExpId=LID10568; bioRep=002WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=75422d1590238057aed56e639e4e423b; size=324K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3296; geoSampleAccession=GSM605630; labExpId=LID10567; bioRep=001WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=4b96def5b0732d53b7ff30e611e42a97; size=587M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000213; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3363; geoSampleAccession=GSM605630; labExpId=LID10568; bioRep=002WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=49871ebb05bc2e786784ef8bd3062c9f; size=730M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1405; geoSampleAccession=GSM605632; labExpId=crg-32; bioRep=gen0133CH; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShortAln; type=bam; md5sum=99a96758feefaa37e4810bcfb268eaf8; size=190M; replicate=133; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1405; geoSampleAccession=GSM605632; labExpId=crg-32; bioRep=gen0133CH; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShortAln; type=bai; md5sum=e9d6d908381a831eefa0948ebfd53c8a; size=5.4M; replicate=133; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1405; geoSampleAccession=GSM605632; labExpId=crg-32; bioRep=gen0133CH; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShortMinusRaw; type=bigWig; md5sum=7ee072c90986f00e2e9b9eafdfffb9dc; size=174M; replicate=133; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1405; geoSampleAccession=GSM605632; labExpId=crg-32; bioRep=gen0133CH; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShortPlusRaw; type=bigWig; md5sum=069a44a560ff4a5a6c80ba22c6062f28; size=176M; replicate=133; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=chromatin; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605632; labExpId=crg-32; bioRep=gen0133CH; labVersion=Produced by Hannon Lab; type=fastq; md5sum=2b37ae3eaaf4352318fdc75e3fef3f70; size=1.7G; replicate=133; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=K562; localization=chromatin; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605632; labExpId=crg-32; bioRep=gen0133CH; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShortTransfrags; type=shortFrags; md5sum=b10a237146847867ff5794dd5ba1fa65; size=44M; replicate=133; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3364; labExpId=LID8930; bioRep=025CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep3; type=bam; md5sum=44588996b7c1830a145ea17d8e3a52d1; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3364; labExpId=LID8930; bioRep=025CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep3; type=bai; md5sum=e6ab6fd7b2ecd3fe843c04a481628711; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3365; labExpId=LID18560; bioRep=026CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep4; type=bam; md5sum=1f818c6d6b7b4dbc36da9632d2635ec8; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3365; labExpId=LID18560; bioRep=026CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapAlnRep4; type=bai; md5sum=23ada0b4fc26df82da7abe7be17b3f6f; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4476; geoSampleAccession=GSM605632; labExpId=LID8930,LID18560; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapContigs; type=bedRnaElements; md5sum=fc52c70a1136cf55987080e026468551; size=2.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4476; geoSampleAccession=GSM605632; labExpId=LID8930,LID18560; bioRep=025CH,026CH; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=3b56c3b4f10c128458c0bda30438597f; size=2.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3364; geoSampleAccession=GSM605632; labExpId=LID8930; bioRep=025CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapMinusRawRep3; type=bigWig; md5sum=8cfc54d326127c6e517d67231c6803a2; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3365; geoSampleAccession=GSM605632; labExpId=LID18560; bioRep=026CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapMinusRawRep4; type=bigWig; md5sum=37de1632c73a3d657e1ab5838e50fa09; size=10M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3364; geoSampleAccession=GSM605632; labExpId=LID8930; bioRep=025CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapPlusRawRep3; type=bigWig; md5sum=4bac393e86441779fcfd6445f57a113f; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3365; geoSampleAccession=GSM605632; labExpId=LID18560; bioRep=026CH; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapPlusRawRep4; type=bigWig; md5sum=57b1b816a606f3435f415938d4340b6a; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3364; geoSampleAccession=GSM605632; labExpId=LID8930; bioRep=025CH; seqPlatform=Illumina_GA2x; type=fastq; md5sum=9b470a4c3577bd40a3afed33d5fbb089; size=971M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562ChromatinShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=chromatin; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000205; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3365; geoSampleAccession=GSM605632; labExpId=LID18560; bioRep=026CH; seqPlatform=Illumina_GA2x; type=fastq; md5sum=333136c9d2e699973dc704ee59e5eebc; size=787M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1406; geoSampleAccession=GSM605629; labExpId=crg-36; bioRep=gen0142C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CytosolShortAln; type=bam; md5sum=0cc50ede720498592566740908ac669f; size=63M; replicate=142; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1406; geoSampleAccession=GSM605629; labExpId=crg-36; bioRep=gen0142C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CytosolShortAln; type=bai; md5sum=9ca3a421bd96e0d077fc14e54273c4b1; size=4.8M; replicate=142; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1406; geoSampleAccession=GSM605629; labExpId=crg-36; bioRep=gen0142C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CytosolShortMinusRaw; type=bigWig; md5sum=5cbb3aedfb442f3dd1bc3410dadfd518; size=22M; replicate=142; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1406; geoSampleAccession=GSM605629; labExpId=crg-36; bioRep=gen0142C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CytosolShortPlusRaw; type=bigWig; md5sum=3b0808e187cc32007d31b25ea91cece1; size=22M; replicate=142; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605629; labExpId=crg-36; bioRep=gen0142C; labVersion=Produced by Hannon Lab; type=fastq; md5sum=e41db398bcbdb1abed3230b37ed2c195; size=905M; replicate=142; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=K562; localization=cytosol; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605629; labExpId=crg-36; bioRep=gen0142C; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562CytosolShortTransfrags; type=shortFrags; md5sum=ec554ecc914e06e8ed784472cc7f5565; size=1.6M; replicate=142; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3297; labExpId=LID10572; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep1; type=bam; md5sum=45fedb7b863fab34cc9a1864eefe58d0; size=862M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3297; labExpId=LID10572; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep1; type=bai; md5sum=d8e7a114b29ea72a699cffc43bcc1a7a; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3298; labExpId=LID10571; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep2; type=bam; md5sum=1dd42d818027c74149a30b341be8a9ea; size=849M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3298; labExpId=LID10571; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapAlnRep2; type=bai; md5sum=9f8ac7373accb45b041183b864af8a96; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4493; geoSampleAccession=GSM605629; labExpId=LID10572,LID10571; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapContigs; type=bedRnaElements; md5sum=9209ff689d1f62487a6210afc0bed839; size=300K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4493; geoSampleAccession=GSM605629; labExpId=LID10572,LID10571; bioRep=001C,002C; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=8faebd571ecacaea9a8ebafd6f8824f9; size=1.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3297; geoSampleAccession=GSM605629; labExpId=LID10572; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapMinusRawRep1; type=bigWig; md5sum=561d398f0b543ed94d5a9079cfd93f4f; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3298; geoSampleAccession=GSM605629; labExpId=LID10571; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapMinusRawRep2; type=bigWig; md5sum=97f175810838a38fc4a9f6e7941a7c39; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3297; geoSampleAccession=GSM605629; labExpId=LID10572; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapPlusRawRep1; type=bigWig; md5sum=7a403e4fc6c5bc7699d04a7ad01bb13d; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3298; geoSampleAccession=GSM605629; labExpId=LID10571; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapPlusRawRep2; type=bigWig; md5sum=a8a864882059a8bc5a8983fecae17da2; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5684; geoSampleAccession=GSM605629; labExpId=LID10572; bioRep=001C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=725654f55054db59a620c61392020e17; size=289K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5711; geoSampleAccession=GSM605629; labExpId=LID10571; bioRep=002C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=13d393cadd13f2ddae9d9f664c5589ff; size=288K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3297; geoSampleAccession=GSM605629; labExpId=LID10572; bioRep=001C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=9d48f1ef3da7b8ab1286b53bf350c064; size=615M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562CytosolShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000206; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3298; geoSampleAccession=GSM605629; labExpId=LID10571; bioRep=002C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=d1975ef6efba87c8821f901af53eabc4; size=548M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1408; geoSampleAccession=GSM605628; labExpId=crg-37; bioRep=gen0143NL; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShortAln; type=bam; md5sum=92bc993126f0a9034a9396a1caf5f36b; size=60M; replicate=143; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1408; geoSampleAccession=GSM605628; labExpId=crg-37; bioRep=gen0143NL; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShortAln; type=bai; md5sum=bf9af5435daaf488b35e7623d9fa99aa; size=4.9M; replicate=143; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1408; geoSampleAccession=GSM605628; labExpId=crg-37; bioRep=gen0143NL; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShortMinusRaw; type=bigWig; md5sum=001f287c628c3e66ab546930f00ab81f; size=39M; replicate=143; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1408; geoSampleAccession=GSM605628; labExpId=crg-37; bioRep=gen0143NL; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShortPlusRaw; type=bigWig; md5sum=4389273c52e0e7a5bc4146d4c0c2ee00; size=39M; replicate=143; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleolus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605628; labExpId=crg-37; bioRep=gen0143NL; labVersion=Produced by Hannon Lab; type=fastq; md5sum=79bcdc9187199406e6638d03173164fe; size=1.1G; replicate=143; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=K562; localization=nucleolus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605628; labExpId=crg-37; bioRep=gen0143NL; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShortTransfrags; type=shortFrags; md5sum=499f8b948c6329c62c2aa0aafd514570; size=6.0M; replicate=143; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3366; labExpId=LID8928; bioRep=025NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep3; type=bam; md5sum=63fb0bb9ad9c1a7bbcb9cc2cd44be86d; size=991M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3366; labExpId=LID8928; bioRep=025NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep3; type=bai; md5sum=1b941e63297d5f451091797bb6814c9a; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3367; labExpId=LID18558; bioRep=026NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep4; type=bam; md5sum=4166bbab0e923c0f407861b9d230cd63; size=983M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3367; labExpId=LID18558; bioRep=026NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapAlnRep4; type=bai; md5sum=39451aad620cabf2605017dfdd08cf45; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4481; geoSampleAccession=GSM605628; labExpId=LID8928,LID18558; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapContigs; type=bedRnaElements; md5sum=6e39fecf670f81058fe63c4dac7941d8; size=535K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4481; geoSampleAccession=GSM605628; labExpId=LID8928,LID18558; bioRep=025NL,026NL; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=16e37beddb6a8d43426a1d646d95bb9e; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3366; geoSampleAccession=GSM605628; labExpId=LID8928; bioRep=025NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapMinusRawRep3; type=bigWig; md5sum=81ac50814794826209a74b836b8c0819; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3367; geoSampleAccession=GSM605628; labExpId=LID18558; bioRep=026NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapMinusRawRep4; type=bigWig; md5sum=be54c86ef9b4b615a9ed0828537c0270; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3366; geoSampleAccession=GSM605628; labExpId=LID8928; bioRep=025NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapPlusRawRep3; type=bigWig; md5sum=5b4f8a64dcf8efb943c90e21570d2826; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3367; geoSampleAccession=GSM605628; labExpId=LID18558; bioRep=026NL; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapPlusRawRep4; type=bigWig; md5sum=91a25d4462f68dbe7c3dbaac3675e2c0; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3366; geoSampleAccession=GSM605628; labExpId=LID8928; bioRep=025NL; seqPlatform=Illumina_GA2x; type=fastq; md5sum=f96e4e47e52b37d978eef27adf7df636; size=851M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleolusShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleolus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000207; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3367; geoSampleAccession=GSM605628; labExpId=LID18558; bioRep=026NL; seqPlatform=Illumina_GA2x; type=fastq; md5sum=1be1fa8860e592135bba9e01ee0c4b19; size=838M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1411; geoSampleAccession=GSM605634; labExpId=crg-39; bioRep=gen0146NP; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShortAln; type=bam; md5sum=55f429d4f6b1d49fc7794a3277473cd4; size=554M; replicate=146; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1411; geoSampleAccession=GSM605634; labExpId=crg-39; bioRep=gen0146NP; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShortAln; type=bai; md5sum=a65f37ad014019833c6e8cdf0368aa2a; size=5.7M; replicate=146; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1411; geoSampleAccession=GSM605634; labExpId=crg-39; bioRep=gen0146NP; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShortMinusRaw; type=bigWig; md5sum=304e95f4f0fd3770e05ee3e77afe5a23; size=436M; replicate=146; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1411; geoSampleAccession=GSM605634; labExpId=crg-39; bioRep=gen0146NP; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShortPlusRaw; type=bigWig; md5sum=f3c9ab8009d30d29e4d8744f62dd7ab6; size=446M; replicate=146; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605634; labExpId=crg-39; bioRep=gen0146NP; labVersion=Produced by Hannon Lab; type=fastq; md5sum=4fa23b0b2b4429814f7fb6e151dd31bc; size=1.9G; replicate=146; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605634; labExpId=crg-39; bioRep=gen0146NP; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShortTransfrags; type=shortFrags; md5sum=135787d24694f7999dd87a0ae4b98c54; size=151M; replicate=146; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3368; labExpId=LID8929; bioRep=025NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep3; type=bam; md5sum=9810e20cb34749352426228fe22f2fe0; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3368; labExpId=LID8929; bioRep=025NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep3; type=bai; md5sum=a8cb8ee02041cc431bdd6556489ec42f; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3369; labExpId=LID18559; bioRep=026NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep4; type=bam; md5sum=4e180551cf0af4c72d4687e3a3f4a0be; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3369; labExpId=LID18559; bioRep=026NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapAlnRep4; type=bai; md5sum=7eec99bf1310b714b26f6f52840e98e8; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4494; geoSampleAccession=GSM605634; labExpId=LID8929,LID18559; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapContigs; type=bedRnaElements; md5sum=8d9bcf4f8c0a71d8a136a1f481e13bd9; size=13M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4494; geoSampleAccession=GSM605634; labExpId=LID8929,LID18559; bioRep=025NP,026NP; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=fa3c27ef7846dae19b90a3642c2cb600; size=3.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3368; geoSampleAccession=GSM605634; labExpId=LID8929; bioRep=025NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapMinusRawRep3; type=bigWig; md5sum=e6054ab6e5ef0109e7e4d9031734c5e9; size=34M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3369; geoSampleAccession=GSM605634; labExpId=LID18559; bioRep=026NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapMinusRawRep4; type=bigWig; md5sum=c22342750e8a7d444f17f756816aef1c; size=34M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3368; geoSampleAccession=GSM605634; labExpId=LID8929; bioRep=025NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapPlusRawRep3; type=bigWig; md5sum=5e021cf32cf5d735d4ee1ece911d2491; size=34M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3369; geoSampleAccession=GSM605634; labExpId=LID18559; bioRep=026NP; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapPlusRawRep4; type=bigWig; md5sum=592a4196ebc8283f27f9d4b4c3364b2c; size=34M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3368; geoSampleAccession=GSM605634; labExpId=LID8929; bioRep=025NP; seqPlatform=Illumina_GA2x; type=fastq; md5sum=5d015dc471ccf8cd33abe038bdef4714; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleoplasmShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleoplasm; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000208; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3369; geoSampleAccession=GSM605634; labExpId=LID18559; bioRep=026NP; seqPlatform=Illumina_GA2x; type=fastq; md5sum=798b7bc9f941fadedc9d5027fc1f06f4; size=978M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1407; geoSampleAccession=GSM605635; labExpId=crg-42; bioRep=gen0151N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleusShortAln; type=bam; md5sum=fa47b4158cfa85da47bdfb92aa292110; size=32M; replicate=151; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1407; geoSampleAccession=GSM605635; labExpId=crg-42; bioRep=gen0151N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleusShortAln; type=bai; md5sum=e6a521aa8435252f4660f573b8a96bf0; size=3.6M; replicate=151; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1407; geoSampleAccession=GSM605635; labExpId=crg-42; bioRep=gen0151N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleusShortMinusRaw; type=bigWig; md5sum=f010b65dccf6e1f03578f1158728e2be; size=11M; replicate=151; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1407; geoSampleAccession=GSM605635; labExpId=crg-42; bioRep=gen0151N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleusShortPlusRaw; type=bigWig; md5sum=808368bb38471e7a2422429257ac72ef; size=11M; replicate=151; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605635; labExpId=crg-42; bioRep=gen0151N; labVersion=Produced by Hannon Lab; type=fastq; md5sum=47f0dc881271463933dd1ace317e18ff; size=391M; replicate=151; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=K562; localization=nucleus; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605635; labExpId=crg-42; bioRep=gen0151N; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562NucleusShortTransfrags; type=shortFrags; md5sum=b846c25f354c246db00c65f16a379c72; size=1.2M; replicate=151; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3299; labExpId=LID10570; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep1; type=bam; md5sum=938a80d561e144724d05d72faeee629a; size=782M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3299; labExpId=LID10570; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep1; type=bai; md5sum=452593789b1044809eacd46b91ab9989; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3301; labExpId=LID10569; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep2; type=bam; md5sum=770d18aceac7c6dbce6c09fbd7169650; size=638M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3301; labExpId=LID10569; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapAlnRep2; type=bai; md5sum=a4e2f0a4355c19a2507f121d58ecb6ad; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4490; geoSampleAccession=GSM605635; labExpId=LID10570,LID10569; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapContigs; type=bedRnaElements; md5sum=7b80f1ac3518f3664d4cc1e5c283a4e0; size=511K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4490; geoSampleAccession=GSM605635; labExpId=LID10570,LID10569; bioRep=001N,002N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=ee64e445a0f98c4b6a8391d6cd9a9aa3; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3299; geoSampleAccession=GSM605635; labExpId=LID10570; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapMinusRawRep1; type=bigWig; md5sum=2ae269e5e5422a9dc7ddeb4de88526da; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3301; geoSampleAccession=GSM605635; labExpId=LID10569; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapMinusRawRep2; type=bigWig; md5sum=1836a0ae8ee33ac6cb55508809dacbc1; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3299; geoSampleAccession=GSM605635; labExpId=LID10570; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapPlusRawRep1; type=bigWig; md5sum=d33b7dfb19f123ffbe91e909494cbdfa; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3301; geoSampleAccession=GSM605635; labExpId=LID10569; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapPlusRawRep2; type=bigWig; md5sum=8b5ca5b6923b1f7175bb643a7c59572e; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5708; geoSampleAccession=GSM605635; labExpId=LID10570; bioRep=001N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=8f77463de47ac2d3afefc8aef66540fa; size=286K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-18; subId=5716; geoSampleAccession=GSM605635; labExpId=LID10569; bioRep=002N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=6adb3566110ad25a8442b7470b6ab93d; size=286K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3299; geoSampleAccession=GSM605635; labExpId=LID10570; bioRep=001N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=7857ffa8cf4b9892b8dbc2522be6b89c; size=808M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562NucleusShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000209; dateSubmitted=2011-01-18; dateUnrestricted=2011-10-18; subId=3301; geoSampleAccession=GSM605635; labExpId=LID10569; bioRep=002N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=02685eb72683978c71ef658a35056631; size=667M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562PolysomeShortAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=polysome; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000210; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1410; geoSampleAccession=GSM605631; labExpId=crg-44; bioRep=gen0154P; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562PolysomeShortAln; type=bam; md5sum=1d6729a0e7ef60365ef0c12627666b41; size=4.5M; replicate=154; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562PolysomeShortAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=polysome; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000210; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1410; geoSampleAccession=GSM605631; labExpId=crg-44; bioRep=gen0154P; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562PolysomeShortAln; type=bai; md5sum=5b32aca4a321202ab1903d7eb482bfab; size=2.4M; replicate=154; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562PolysomeShortMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=K562; localization=polysome; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000210; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1410; geoSampleAccession=GSM605631; labExpId=crg-44; bioRep=gen0154P; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562PolysomeShortMinusRaw; type=bigWig; md5sum=4cd0855c5b328c169d0dbb06a4531336; size=4.5M; replicate=154; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562PolysomeShortPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=K562; localization=polysome; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000210; dateSubmitted=2009-09-23; dateResubmitted=2010-06-14; dateUnrestricted=2010-06-23; subId=1410; geoSampleAccession=GSM605631; labExpId=crg-44; bioRep=gen0154P; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562PolysomeShortPlusRaw; type=bigWig; md5sum=36c98037c3852b824e1da0efa2ac3090; size=4.5M; replicate=154; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562PolysomeShortRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=polysome; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000210; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605631; labExpId=crg-44; bioRep=gen0154P; labVersion=Produced by Hannon Lab; type=fastq; md5sum=7916e2647309884d4dc586790fb04222; size=297M; replicate=154; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqK562PolysomeShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=K562; localization=polysome; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000210; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605631; labExpId=crg-44; bioRep=gen0154P; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqK562PolysomeShortTransfrags; type=shortFrags; md5sum=7af2e4e15b34c58e1eabf798cfe2fca5; size=325K; replicate=154; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6514; geoSampleAccession=GSM973676; labExpId=LID46458,LID46459; bioRep=089WC,090WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellCiptapContigs; type=bedRnaElements; md5sum=51b978a8e11e0c2ff4fa92b912659838; size=2.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6770; geoSampleAccession=GSM973676; labExpId=LID46458,LID46459; bioRep=089WC,090WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=55ca3782e97a655870be6bd1c9b43beb; size=1.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellCiptapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7247; geoSampleAccession=GSM973676; labExpId=LID46458; bioRep=089WC; labProtocolId=089WCs; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=54905e7549b196ec576f559edec328fd; size=426K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellCiptapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7211; geoSampleAccession=GSM973676; labExpId=LID46459; bioRep=090WC; labProtocolId=090WCs; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=a3fd75b797e2ad4a77512f403a3f759f; size=431K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6515; geoSampleAccession=GSM973690; labExpId=LID46311,LID46312; bioRep=089WC,090WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellContigs; type=bedRnaElements; md5sum=53d9dfc3e4946f16bd03c013d436c904; size=831K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6771; geoSampleAccession=GSM973690; labExpId=LID46311,LID46312; bioRep=089WC,090WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=5785251bb837076156169da6d29b1765; size=2.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7253; geoSampleAccession=GSM973690; labExpId=LID46311; bioRep=089WC; labProtocolId=089WCs; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=6a165ed11a580a0a47f78bbb2016dce5; size=410K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7213; geoSampleAccession=GSM973690; labExpId=LID46312; bioRep=090WC; labProtocolId=090WCs; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=ed42c7a201abeaef7c8e61c5bf65ac83; size=412K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5845; labExpId=LID46311; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep3; type=bam; md5sum=a651083200997c69d55bdd58cd007252; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5845; labExpId=LID46311; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep3; type=bai; md5sum=1039b9bc5fd8cfd7fc3c8c99b4af27ee; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5805; labExpId=LID46312; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep4; type=bam; md5sum=042d7a296291b10479b79eebd7174aa7; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5805; labExpId=LID46312; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalAlnRep4; type=bai; md5sum=17f0a5148c2538a1ddaa9a85fa199035; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5837; labExpId=LID46458; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep3; type=bam; md5sum=e8d34aa78ef9b02c712cf13664f7b71e; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5837; labExpId=LID46458; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep3; type=bai; md5sum=48ed069d6afd982b2ec9817423f30672; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5803; labExpId=LID46459; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep4; type=bam; md5sum=666c44ee6bae3acead61384372203f9b; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5803; labExpId=LID46459; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapAlnRep4; type=bai; md5sum=b7d4d0aaf16b03b8a6a3061b3d2139e0; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5837; geoSampleAccession=GSM973676; labExpId=LID46458; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapMinusRep3; type=bigWig; md5sum=5e245fca36b0b9cec74d041f75e2cb7f; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5803; geoSampleAccession=GSM973676; labExpId=LID46459; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapMinusRep4; type=bigWig; md5sum=cfc3d926fda3fa577dcebf27f6c29e2f; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5837; geoSampleAccession=GSM973676; labExpId=LID46458; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapPlusRep3; type=bigWig; md5sum=c5f8f97dc2e1e2f80339d090d896c026; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5803; geoSampleAccession=GSM973676; labExpId=LID46459; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapPlusRep4; type=bigWig; md5sum=74e74a880928e30fe7523e08cf32162d; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5837; geoSampleAccession=GSM973676; labExpId=LID46458; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0c57e03e7eb405de3cb922e18a53ca5b; size=5.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalCiptapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002610; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5803; geoSampleAccession=GSM973676; labExpId=LID46459; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ada8088eb919369e61237271ef2958ef; size=4.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5845; geoSampleAccession=GSM973690; labExpId=LID46311; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalMinusRep3; type=bigWig; md5sum=b8a25d9c874b9750395fc431343ec4a1; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5805; geoSampleAccession=GSM973690; labExpId=LID46312; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalMinusRep4; type=bigWig; md5sum=1a0aa614525ca7830d25af993b55f6dc; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5845; geoSampleAccession=GSM973690; labExpId=LID46311; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalPlusRep3; type=bigWig; md5sum=04a43797e5c150dd52d52c99418c4787; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5805; geoSampleAccession=GSM973690; labExpId=LID46312; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalPlusRep4; type=bigWig; md5sum=ae95568fc7e880ec71444bbb4c40c4fe; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5845; geoSampleAccession=GSM973690; labExpId=LID46311; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a5f723ec50c25dcd1607d022461f11bf; size=6.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002609; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5805; geoSampleAccession=GSM973690; labExpId=LID46312; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1c653a498ab47c074e8368cb0ad5f614; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep1V2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-03-01; dateUnrestricted=2011-10-19; subId=5937; labExpId=LID47160; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep1V2; type=bam; md5sum=d5028b68bb1789cda597ae6a502e8f02; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep1V2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-03-01; dateUnrestricted=2011-10-19; subId=5937; labExpId=LID47160; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep1V2; type=bai; md5sum=1553ffb0f88526c7f082173e78c118f4; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep2V2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-02-29; dateUnrestricted=2011-10-19; subId=5923; labExpId=LID47161; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep2V2; type=bam; md5sum=83e906399cdb5977bfb165138ca1a7d6; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep2V2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-02-29; dateUnrestricted=2011-10-19; subId=5923; labExpId=LID47161; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapAlnRep2V2; type=bai; md5sum=d93dd535c84b0172d36489a99d2db7e5; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapMinusRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-03-01; dateUnrestricted=2011-10-19; subId=5937; geoSampleAccession=GSM897081; labExpId=LID47160; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapMinusRep1V2; type=bigWig; md5sum=4fb86c63ce408f1dd81d9e9c6d999d1e; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapMinusRep2V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-02-29; dateUnrestricted=2011-10-19; subId=5923; geoSampleAccession=GSM897081; labExpId=LID47161; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapMinusRep2V2; type=bigWig; md5sum=dce18f6c5640343fd8d8cb08c887003a; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapPlusRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-03-01; dateUnrestricted=2011-10-19; subId=5937; geoSampleAccession=GSM897081; labExpId=LID47160; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapPlusRep1V2; type=bigWig; md5sum=4a7d1ee5cd3fce77c107ffd69ac26230; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapPlusRep2V2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-02-29; dateUnrestricted=2011-10-19; subId=5923; geoSampleAccession=GSM897081; labExpId=LID47161; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapPlusRep2V2; type=bigWig; md5sum=4c578f7cc5eaf741c409fc6eae83309d; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapProtocolRep1V2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-02-14; dateUnrestricted=2011-10-19; subId=5645; geoSampleAccession=GSM897081; labExpId=LID47160; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=7600b5c5b63d867a3cebb96cfad8fced; size=138K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapProtocolRep2V2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-02-14; dateUnrestricted=2011-10-19; subId=5636; geoSampleAccession=GSM897081; labExpId=LID47161; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=b21db593369ee188ac461cba38349f01; size=138K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapRawDataRep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-03-01; dateUnrestricted=2011-10-19; subId=5937; geoSampleAccession=GSM897081; labExpId=LID47160; bioRep=089WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=71306c02029ec02fada9279de2952f48; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellShorttotalTapRawDataRep2V2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-02-29; dateUnrestricted=2011-10-19; subId=5923; geoSampleAccession=GSM897081; labExpId=LID47161; bioRep=090WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ff5e653fcf26eda119d69288f65e9576; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellTapContigsV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-03-28; dateUnrestricted=2011-10-19; subId=6519; geoSampleAccession=GSM897081; labExpId=LID47160,LID47161; bioRep=089WC,090WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CellTapContigsV2; type=bedRnaElements; md5sum=711b77ff0b70941f2e5ecf7cb93f3c4a; size=912K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CellTapExonsGencV10V2.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; submittedDataVersion=V2 - Same experiment experiment as before, but run on a HiSeq2000 this version.; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001090; dateSubmitted=2011-01-19; dateResubmitted=2012-03-30; dateUnrestricted=2011-10-19; subId=6776; geoSampleAccession=GSM897081; labExpId=LID47160,LID47161; bioRep=089WC,090WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=eaa8e07795bd14cb120d1f94a41a3bd8; size=1.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6513; geoSampleAccession=GSM973672; labExpId=LID46315,LID46316; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolContigs; type=bedRnaElements; md5sum=501be93a84524ef3b61cf73640d65724; size=803K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6829; geoSampleAccession=GSM973672; labExpId=LID46315,LID46316; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=0e58540d0f57af95394bd78c10d1036c; size=2.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7228; geoSampleAccession=GSM973672; labExpId=LID46315; bioRep=089C; labProtocolId=089Cs; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=8f4cb69f67755e87569dae1e0ecd9de1; size=420K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7225; geoSampleAccession=GSM973672; labExpId=LID46316; bioRep=090C; labProtocolId=090Cs; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=647c0fe4b393870cedddb6dce02506aa; size=411K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5816; labExpId=LID46315; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep3; type=bam; md5sum=10ee8e792105a16c8c04da5748749ef1; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5816; labExpId=LID46315; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep3; type=bai; md5sum=55355e4c02d7cc3e4b9c07f92189990d; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5814; labExpId=LID46316; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep4; type=bam; md5sum=575feb4fd4a1f5ca0278204688307078; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5814; labExpId=LID46316; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalAlnRep4; type=bai; md5sum=6d04c4f6c772da98837d7f44da621462; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5816; geoSampleAccession=GSM973672; labExpId=LID46315; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalMinusRep3; type=bigWig; md5sum=15a6c53a45a8f701ae404777368a3b7e; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5814; geoSampleAccession=GSM973672; labExpId=LID46316; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalMinusRep4; type=bigWig; md5sum=e74bae3fb8314e6dc75f65c4ac1d97cd; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5816; geoSampleAccession=GSM973672; labExpId=LID46315; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalPlusRep3; type=bigWig; md5sum=1606056f3f63fc2334ca12cce05ecb73; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5814; geoSampleAccession=GSM973672; labExpId=LID46316; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalPlusRep4; type=bigWig; md5sum=3c3b5c780786e466e151a85f97e1a51e; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5816; geoSampleAccession=GSM973672; labExpId=LID46315; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=8732e47fe628f63dc3e4ab19aba1c1c5; size=6.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002607; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5814; geoSampleAccession=GSM973672; labExpId=LID46316; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ef642f48c4a250866f24693fc7aecd87; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5934; labExpId=LID47162; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep3; type=bam; md5sum=91027d27ee8d2218345cbbbde55cd310; size=9.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5934; labExpId=LID47162; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep3; type=bai; md5sum=6bef96025d9c6c6b6435c202b37ed8dd; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5955; labExpId=LID47163; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep4; type=bam; md5sum=3a1ef32f8e18bf61a5d56596ff64c9b8; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5955; labExpId=LID47163; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapAlnRep4; type=bai; md5sum=eac9964c1f6f22516ff1a0ecc121b24d; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5934; geoSampleAccession=GSM973681; labExpId=LID47162; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapMinusRep3; type=bigWig; md5sum=3c14a5b7bcef6b02cd5cb003c00bb5cb; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5955; geoSampleAccession=GSM973681; labExpId=LID47163; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapMinusRep4; type=bigWig; md5sum=0b3a4aeefef5bc30ac99f0b74415b143; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5934; geoSampleAccession=GSM973681; labExpId=LID47162; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapPlusRep3; type=bigWig; md5sum=b260e7ef4a4b38c820ce6969faee42e7; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5955; geoSampleAccession=GSM973681; labExpId=LID47163; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapPlusRep4; type=bigWig; md5sum=3bdeb154d26495e939c876c669897f30; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5643; geoSampleAccession=GSM973681; labExpId=LID47162; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=8b32621cfabddf535eab4c3e74cc5ab3; size=144K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5631; geoSampleAccession=GSM973681; labExpId=LID47163; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=135d9e0dee9bb88ac92296ca58f69287; size=143K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5934; geoSampleAccession=GSM973681; labExpId=LID47162; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=3b1585a9ac72be13f2166bcfdcb84f26; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-03-01; dateUnrestricted=2012-12-01; subId=5955; geoSampleAccession=GSM973681; labExpId=LID47163; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=916b68a6d2197b35dc4a2d6718eba1c8; size=6.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6524; geoSampleAccession=GSM973681; labExpId=LID47162,LID47163; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7CytosolTapContigs; type=bedRnaElements; md5sum=8e30274e549e15dd1886683b05ab24d9; size=651K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7CytosolTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002466; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6841; geoSampleAccession=GSM973681; labExpId=LID47162,LID47163; bioRep=089C,090C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=10d88aa23ddebeec84aad0647514e99f; size=1.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6523; geoSampleAccession=GSM973687; labExpId=LID46313,LID46314; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusContigs; type=bedRnaElements; md5sum=e5ffe612ad3d899f089e9d17d4c75bfc; size=1.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6780; geoSampleAccession=GSM973687; labExpId=LID46313,LID46314; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=834a153b79f38e6dcb15690c66293c6c; size=2.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7215; geoSampleAccession=GSM973687; labExpId=LID46313; bioRep=089N; labProtocolId=089Ns; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=9646851c79eec11c05090d5fa5179c0f; size=455K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7232; geoSampleAccession=GSM973687; labExpId=LID46314; bioRep=090N; labProtocolId=090Ns; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d3fb758db5183cec7d15d37f9d1f2be2; size=453K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5806; labExpId=LID46313; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep3; type=bam; md5sum=5ec679d8158e6dc9267002efe92f272a; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5806; labExpId=LID46313; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep3; type=bai; md5sum=eb24b5fe7338a839e4d96fcbd6faddbc; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5822; labExpId=LID46314; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep4; type=bam; md5sum=6007e4cee6fc3cfaa5df3f3e6a107175; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5822; labExpId=LID46314; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalAlnRep4; type=bai; md5sum=199982b19dc572c1c26ccc3b1f719f57; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5806; geoSampleAccession=GSM973687; labExpId=LID46313; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalMinusRep3; type=bigWig; md5sum=5cc2b0e987d478a83cc3f8ee1e25db7b; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5822; geoSampleAccession=GSM973687; labExpId=LID46314; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalMinusRep4; type=bigWig; md5sum=e2ff6e5506c0a049cd7360238da146ba; size=6.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5806; geoSampleAccession=GSM973687; labExpId=LID46313; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalPlusRep3; type=bigWig; md5sum=287684fad2f80ac9e65922071348c713; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5822; geoSampleAccession=GSM973687; labExpId=LID46314; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalPlusRep4; type=bigWig; md5sum=a63059b6fdfe577afb14cecf5d5d3863; size=6.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5806; geoSampleAccession=GSM973687; labExpId=LID46313; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a69b9cb54e5db606002967b9d5fc849d; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002608; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5822; geoSampleAccession=GSM973687; labExpId=LID46314; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b5c85795ce1df3a8ac306b675186e5e6; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5944; labExpId=LID47164; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep3; type=bam; md5sum=629a97789cddc135e3242989841f7995; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5944; labExpId=LID47164; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep3; type=bai; md5sum=5b6000df2bbba8d1406537339f5c2997; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5941; labExpId=LID47165; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep4; type=bam; md5sum=1709e08a58814d011716cb637906c3ac; size=10G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5941; labExpId=LID47165; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapAlnRep4; type=bai; md5sum=9de67dbaa8c087203d41a957988c9648; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5944; geoSampleAccession=GSM973682; labExpId=LID47164; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapMinusRep3; type=bigWig; md5sum=d5ee0916569d0b8b039e3db89dc82fc0; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5941; geoSampleAccession=GSM973682; labExpId=LID47165; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapMinusRep4; type=bigWig; md5sum=c8c729ce9bd7c7990a24bff186d34554; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5944; geoSampleAccession=GSM973682; labExpId=LID47164; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapPlusRep3; type=bigWig; md5sum=b8013e8e476a916d612f53ca8d8a04cf; size=7.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5941; geoSampleAccession=GSM973682; labExpId=LID47165; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapPlusRep4; type=bigWig; md5sum=e2074eed4ffe74d18945e69353a3fee3; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5652; geoSampleAccession=GSM973682; labExpId=LID47164; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=3235b95a1c1fc185a38c11a24beddc8d; size=143K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5649; geoSampleAccession=GSM973682; labExpId=LID47165; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d7ddb46b5b6b0d43d271d83079e8a615; size=144K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5944; geoSampleAccession=GSM973682; labExpId=LID47164; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a099da21fb1df213ecf1ee8052bd8175; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5941; geoSampleAccession=GSM973682; labExpId=LID47165; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c1d6119e0dd0b074c3628680b36d4bad; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6522; geoSampleAccession=GSM973682; labExpId=LID47164,LID47165; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqMcf7NucleusTapContigs; type=bedRnaElements; md5sum=e5dfe43bc6842638b04cb9cc19ddb992; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMcf7NucleusTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=MCF-7; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002467; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6839; geoSampleAccession=GSM973682; labExpId=LID47164,LID47165; bioRep=089N,090N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=4ee6d6db8ea87f55acc7aab825ccd8c1; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5832; labExpId=LID44360; bioRep=039WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep1; type=bam; md5sum=ff0021672bcb17530918aa34429fe96a; size=1022M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5832; labExpId=LID44360; bioRep=039WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep1; type=bai; md5sum=6213817ccacd1bfd3ba01f334e8e0b06; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5826; labExpId=LID44361; bioRep=040WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep2; type=bam; md5sum=ffe71e0b0ab379d3c9cc349d7bd34002; size=763M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5826; labExpId=LID44361; bioRep=040WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapAlnRep2; type=bai; md5sum=31586e12c2bac7ab89b25336160d035a; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6494; geoSampleAccession=GSM977044; labExpId=LID44360,LID44361; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapContigs; type=bedRnaElements; md5sum=947daf3be39b1e0642d6da77ab5f10bc; size=794K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6752; geoSampleAccession=GSM977044; labExpId=LID44360,LID44361; bioRep=039WC,040WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=9ed04ad1e4f608d2e3a233006aa572f6; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5832; geoSampleAccession=GSM977044; labExpId=LID44360; bioRep=039WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapMinusRep1; type=bigWig; md5sum=dc1bfbff15ff94896c3892d0246c9509; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5826; geoSampleAccession=GSM977044; labExpId=LID44361; bioRep=040WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapMinusRep2; type=bigWig; md5sum=af05cd93e46cb1b6eccf6986183258cf; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5832; geoSampleAccession=GSM977044; labExpId=LID44360; bioRep=039WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapPlusRep1; type=bigWig; md5sum=7e3f792d88051246b6515e958a5b6c9f; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5826; geoSampleAccession=GSM977044; labExpId=LID44361; bioRep=040WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqMonocd14CellTapPlusRep2; type=bigWig; md5sum=904167931009f2c9b06b1f30dcbace33; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7169; geoSampleAccession=GSM977044; labExpId=LID44360; bioRep=039WC; labProtocolId=039WCs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=0fb1729d6ff88f6a79f35209e720a0ea; size=204K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01746; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7160; geoSampleAccession=GSM977044; labExpId=LID44361; bioRep=040WC; labProtocolId=040WCs; seqPlatform=Illumina_GA2x; type=pdf; md5sum=a9aff07d7d4ba2b9b6c28929ac5dff72; size=208K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5832; geoSampleAccession=GSM977044; labExpId=LID44360; bioRep=039WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=371bfc0a60aa869ac6559ef8958002a4; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqMonocd14CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=Monocytes-CD14+; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002898; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5826; geoSampleAccession=GSM977044; labExpId=LID44361; bioRep=040WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=9af86a083eaa9dd1a4dc5b7c6be060a6; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5935; labExpId=LID47242; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapAlnRep2; type=bam; md5sum=3d701317a847924fdd78fa6bd4dc892d; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5935; labExpId=LID47242; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapAlnRep2; type=bai; md5sum=da23acdc03e77d2e5ac34ea774591e57; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5935; geoSampleAccession=GSM977034; labExpId=LID47242; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapMinusRep2; type=bigWig; md5sum=aa25a0a8b5cd0c16b2cd2e360ee91255; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5935; geoSampleAccession=GSM977034; labExpId=LID47242; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapPlusRep2; type=bigWig; md5sum=bfb7d1416b177f8cd13bded38c2ce6e9; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf00608013CellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5935; geoSampleAccession=GSM977034; labExpId=LID47242; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b5c54dbb3b846e062a73a501563e05bb; size=6.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5945; labExpId=LID47241; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapAlnRep1; type=bam; md5sum=2ef2dcd09b077b9ad7dc3d3af9d741fe; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5945; labExpId=LID47241; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapAlnRep1; type=bai; md5sum=9f761be42887ff3a83685fb6b95dd907; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5945; geoSampleAccession=GSM977034; labExpId=LID47241; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapMinusRep1; type=bigWig; md5sum=a30eb8e3b75042802d9d55c03ada269b; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5945; geoSampleAccession=GSM977034; labExpId=LID47241; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapPlusRep1; type=bigWig; md5sum=fed8a3abe00bcde580ded752e1a63cf6; size=7.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdf70717012CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5945; geoSampleAccession=GSM977034; labExpId=LID47241; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=571fead73324272902509ddf5e0499ca; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdfCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6488; geoSampleAccession=GSM977034; labExpId=LID47241,LID47242; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhdfCellTapContigs; type=bedRnaElements; md5sum=c61f439ee0f4910d667eb9eb3813d159; size=1.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdfCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6745; geoSampleAccession=GSM977034; labExpId=LID47241,LID47242; bioRep=049WC,050WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=d4f07005ec76d76170a55f61106cbc36; size=2.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdfCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7071701.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7185; geoSampleAccession=GSM977034; labExpId=LID47241; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=66c1477c01580b69130d85517dbd30df; size=285K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhdfCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHDF; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=0060801.3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002883; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7179; geoSampleAccession=GSM977034; labExpId=LID47242; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d6704fa4406e511ca06b7ce200340463; size=305K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3371; labExpId=LID20999; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep1; type=bam; md5sum=3f6f90b587214ce0e8a2bbafe80b025e; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3371; labExpId=LID20999; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep1; type=bai; md5sum=1c71f337d97f1300a8a4d511aa72f533; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3372; labExpId=LID21000; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep2; type=bam; md5sum=ab6ac9d935ef9c2c9538512946c5f4ac; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3372; labExpId=LID21000; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapAlnRep2; type=bai; md5sum=331637cf83a20d6dcc671e4b3e01a6a5; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4472; geoSampleAccession=GSM897086; labExpId=LID20999,LID21000; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapContigs; type=bedRnaElements; md5sum=d0af9d62c5690158f7fc413a50d3e121; size=560K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4472; geoSampleAccession=GSM897086; labExpId=LID20999,LID21000; bioRep=007WC,008WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=86221a4263bc19708058ec39e990ff9b; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3371; geoSampleAccession=GSM897086; labExpId=LID20999; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapMinusRawRep1; type=bigWig; md5sum=043440435b36ce61bd34fdfdb8d7662a; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3372; geoSampleAccession=GSM897086; labExpId=LID21000; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapMinusRawRep2; type=bigWig; md5sum=ba9944c70d4a8de032b5657ef455273a; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3371; geoSampleAccession=GSM897086; labExpId=LID20999; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapPlusRawRep1; type=bigWig; md5sum=6cfbb025bc9c9a37094ce106b5f5421d; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3372; geoSampleAccession=GSM897086; labExpId=LID21000; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCellShorttotalTapPlusRawRep2; type=bigWig; md5sum=2f0ccdb07ccffc9addc89b7c5a42eb0a; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5718; geoSampleAccession=GSM897086; labExpId=LID20999; bioRep=007WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=41b637907fedafb918a7f289fe13107b; size=295K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5688; geoSampleAccession=GSM897086; labExpId=LID21000; bioRep=008WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=e066dc37eae75a0c293044fbe878b599; size=292K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3371; geoSampleAccession=GSM897086; labExpId=LID20999; bioRep=007WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=254f04a88e62aecacf37f1de096a5979; size=946M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEK; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001091; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3372; geoSampleAccession=GSM897086; labExpId=LID21000; bioRep=008WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=e045eb3939932f6afaa7cb024f8f5758; size=770M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3373; labExpId=LID21002; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep3; type=bam; md5sum=22df271f2e055ac3a6ba4f82f411bb29; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3373; labExpId=LID21002; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep3; type=bai; md5sum=a901cfd4ed7fcb7ff1d532abb64170d8; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3374; labExpId=LID21004; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep4; type=bam; md5sum=72345303233f9f492d7b40a7ad3d8872; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3374; labExpId=LID21004; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapAlnRep4; type=bai; md5sum=299c73516e46504512a79fc44dceb25c; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4469; geoSampleAccession=GSM897078; labExpId=LID21002,LID21004; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapContigs; type=bedRnaElements; md5sum=0aa2ccb251b6b8daa3c0f9c0b936f4c6; size=632K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4469; geoSampleAccession=GSM897078; labExpId=LID21002,LID21004; bioRep=027C,028C; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=dc206f3ab00485e7fd9659c376981e8b; size=1.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3373; geoSampleAccession=GSM897078; labExpId=LID21002; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapMinusRawRep3; type=bigWig; md5sum=eff824d26e69a9053d8dddbb0684dd9c; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3374; geoSampleAccession=GSM897078; labExpId=LID21004; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapMinusRawRep4; type=bigWig; md5sum=c1e524f323d185200277800248d1e1e5; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3373; geoSampleAccession=GSM897078; labExpId=LID21002; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapPlusRawRep3; type=bigWig; md5sum=cc831581083bd473b41f7cd427fffb11; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3374; geoSampleAccession=GSM897078; labExpId=LID21004; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapPlusRawRep4; type=bigWig; md5sum=b6ec92eb7fa88e200e046ab169ab0610; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5686; geoSampleAccession=GSM897078; labExpId=LID21002; bioRep=027C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=62b5d06ed893cfd5bf2b70e565f317e8; size=333K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5713; geoSampleAccession=GSM897078; labExpId=LID21004; bioRep=028C; seqPlatform=Illumina_GA2x; type=pdf; md5sum=45ca9ad813b9c291ebeb31589d7d6fb1; size=293K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3373; geoSampleAccession=GSM897078; labExpId=LID21002; bioRep=027C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=8815f0827d4783aa21a5dd280641b0a2; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekCytosolShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEK; localization=cytosol; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001092; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3374; geoSampleAccession=GSM897078; labExpId=LID21004; bioRep=028C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=ead145e114537185482da76f2f6c2400; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3380; labExpId=LID21001; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep3; type=bam; md5sum=86dfffadc9e67c5f19870f957198ce4d; size=675M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3380; labExpId=LID21001; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep3; type=bai; md5sum=44fbb70c74744a372f8e867ccc874fce; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3375; labExpId=LID21003; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep4; type=bam; md5sum=055e5581e306819524a51f19749eaa58; size=817M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3375; labExpId=LID21003; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapAlnRep4; type=bai; md5sum=11b532bec87b6284b8f0d102fe1d02d8; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4492; geoSampleAccession=GSM897076; labExpId=LID21001,LID21003; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=7c4ab7c6178ec276264cc459ae2c0558; size=884K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3380; geoSampleAccession=GSM897076; labExpId=LID21001; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapMinusRawRep3; type=bigWig; md5sum=f1aed5ec40443beee05d7f80307ad2cb; size=1.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3375; geoSampleAccession=GSM897076; labExpId=LID21003; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapMinusRawRep4; type=bigWig; md5sum=d0c13d4a419eee2a3390fea8f807bc11; size=2.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3380; geoSampleAccession=GSM897076; labExpId=LID21001; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapPlusRawRep3; type=bigWig; md5sum=8ed219b83cd0f36a4d0495e6642427c7; size=1.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3375; geoSampleAccession=GSM897076; labExpId=LID21003; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapPlusRawRep4; type=bigWig; md5sum=61e3ab67bd0e1f27649dbc901e419a22; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5701; geoSampleAccession=GSM897076; labExpId=LID21001; bioRep=027N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=0fbb145eec88cbe6028ae6f787dd9b15; size=338K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5683; geoSampleAccession=GSM897076; labExpId=LID21003; bioRep=028N; seqPlatform=Illumina_GA2x; type=pdf; md5sum=9c80675c45ec42866dfae3ef6d252929; size=333K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3380; geoSampleAccession=GSM897076; labExpId=LID21001; bioRep=027N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=a32508dc782736896419d2939422c387; size=769M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEK; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3375; geoSampleAccession=GSM897076; labExpId=LID21003; bioRep=028N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=5d296705dea53646051ca6e752bede15; size=898M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEK; sex=F; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2012-05-07; dateUnrestricted=2013-02-07; subId=6855; geoSampleAccession=GSM897076; labExpId=LID21001,LID21003; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqNhekNucleusTapContigs; type=bedRnaElements; md5sum=21a14145c1c86b7bd60986ce5048febd; size=247K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhekNucleusTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHEK; sex=F; localization=nucleus; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; donorId=4F1155J; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001093; dateSubmitted=2012-05-07; dateUnrestricted=2013-02-07; subId=6834; geoSampleAccession=GSM897076; labExpId=LID21001,LID21003; bioRep=027N,028N; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=ca63a435de4fc7a6aaee1ac681f237a9; size=895K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6093; labExpId=LID47611; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep1; type=bam; md5sum=7a20671b91e3b10a3a8c5dab321e0bba; size=19G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6093; labExpId=LID47611; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep1; type=bai; md5sum=eee965ca244d1ef09a6142d569e1ae79; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6100; labExpId=LID47612; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep2; type=bam; md5sum=071b19167b23fcc228e44619d14f4200; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6100; labExpId=LID47612; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapAlnRep2; type=bai; md5sum=ca506615d8787f1379a5f9229ff3afdc; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6022001,5071302.2; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6843; geoSampleAccession=GSM977045; labExpId=LID47611,LID47612; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapContigs; type=bedRnaElements; md5sum=f4f7c1254f3045365be5beca46002d0d; size=2.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=6022001,5071302.2; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6824; geoSampleAccession=GSM977045; labExpId=LID47611,LID47612; bioRep=081WC,082WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=b31e1900453326741ee68d9c03e1e1cb; size=2.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6093; geoSampleAccession=GSM977045; labExpId=LID47611; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapMinusRep1; type=bigWig; md5sum=f2d82787de76a68af488680e88dbd85c; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6100; geoSampleAccession=GSM977045; labExpId=LID47612; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapMinusRep2; type=bigWig; md5sum=edd28288214d7af699dac2635b1ed252; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6093; geoSampleAccession=GSM977045; labExpId=LID47611; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapPlusRep1; type=bigWig; md5sum=e06147947728767e3460998558576b6b; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6100; geoSampleAccession=GSM977045; labExpId=LID47612; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemfm2CellTapPlusRep2; type=bigWig; md5sum=722ebe8b247d71e3e5ac75561546115c; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022001; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7164; geoSampleAccession=GSM977045; labExpId=LID47611; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=583dcf41781cc73a48455117ed66c740; size=256K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=5071302.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7178; geoSampleAccession=GSM977045; labExpId=LID47612; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=bccf9ac0dfd043ef782b04b9ac04d5c1; size=267K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; subId=6093; geoSampleAccession=GSM977045; labExpId=LID47611; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=fb17cb7b2282d55464e64222e3090b77; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemfm2CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEM.f_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002895; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6100; geoSampleAccession=GSM977045; labExpId=LID47612; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=3e899c73121f0bc2f5d6b0effbc94998; size=8.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6103; labExpId=LID47613; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep1; type=bam; md5sum=7e2bc3c42c7e0d9ca4c329ba7170a62c; size=24G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6103; labExpId=LID47613; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep1; type=bai; md5sum=e5cde7c5bb4fe46514108851a885d477; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6102; labExpId=LID47614; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep2; type=bam; md5sum=13f5bf2a85eb1bf29dd43f4f2bc69dfc; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6102; labExpId=LID47614; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapAlnRep2; type=bai; md5sum=13a87280f7566a9507e81b83c8a75702; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=7012303,7011001.2; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6856; geoSampleAccession=GSM977047; labExpId=LID47613,LID47614; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapContigs; type=bedRnaElements; md5sum=879d9153567e8b196972c26ad83fc1b7; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=7012303,7011001.2; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6836; geoSampleAccession=GSM977047; labExpId=LID47613,LID47614; bioRep=083WC,084WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=61a408d18ac4742947a2000d1fbd932d; size=2.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6103; geoSampleAccession=GSM977047; labExpId=LID47613; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapMinusRep1; type=bigWig; md5sum=b8c9535ce5cf036539053ecbb4bbf2ad; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6102; geoSampleAccession=GSM977047; labExpId=LID47614; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapMinusRep2; type=bigWig; md5sum=cd19ce7313acd0aa0b3db813bb32ee8a; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6103; geoSampleAccession=GSM977047; labExpId=LID47613; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapPlusRep1; type=bigWig; md5sum=91254474181c825ee6ab3e1dff1dca32; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6102; geoSampleAccession=GSM977047; labExpId=LID47614; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqNhemm2CellTapPlusRep2; type=bigWig; md5sum=1e6b2b5244ac3a37d4b2254b92071dd1; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7012303; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7186; geoSampleAccession=GSM977047; labExpId=LID47613; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=db7876d96d8040911d022b77ba2c1495; size=269K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=7011001.2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7158; geoSampleAccession=GSM977047; labExpId=LID47614; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=aebef4ba6f37e20946367d592361eabd; size=257K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6103; geoSampleAccession=GSM977047; labExpId=LID47613; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c6369df1e8b61b0508cb0a84c637dc09; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqNhemm2CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=NHEM_M2; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002897; dateSubmitted=2012-03-21; dateUnrestricted=2012-12-20; subId=6102; geoSampleAccession=GSM977047; labExpId=LID47614; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=159d200c0dc6c075b1e2070f4b4d2a35; size=5.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqProstateCellShortTransfrags.shortFrags.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Transfrags; cell=prostate; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000211; dateSubmitted=2009-09-23; dateResubmitted=2010-07-20; dateUnrestricted=2010-06-23; subId=1965; geoSampleAccession=GSM605626; labExpId=crg-61; bioRep=gen0161WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqProstateCellShortTransfrags; type=shortFrags; md5sum=b6f38dbc11f6820eef4cfbc456373e45; size=3.7M; replicate=161; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqProstateCellTotalAln.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=prostate; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000211; dateSubmitted=2009-09-23; dateResubmitted=2010-06-30; dateUnrestricted=2010-06-23; subId=1837; geoSampleAccession=GSM605626; labExpId=crg-61; bioRep=gen0161WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqProstateCellTotalAln; type=bam; md5sum=8ee9ea5b2f0854fcacda49f88725baf6; size=98M; replicate=161; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqProstateCellTotalAln.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=prostate; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000211; dateSubmitted=2009-09-23; dateResubmitted=2010-06-30; dateUnrestricted=2010-06-23; subId=1837; geoSampleAccession=GSM605626; labExpId=crg-61; bioRep=gen0161WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqProstateCellTotalAln; type=bai; md5sum=c3b0190ef41a3178226e64aab0e129cb; size=5.0M; replicate=161; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqProstateCellTotalMinusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=prostate; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000211; dateSubmitted=2009-09-23; dateResubmitted=2010-06-30; dateUnrestricted=2010-06-23; subId=1837; geoSampleAccession=GSM605626; labExpId=crg-61; bioRep=gen0161WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqProstateCellTotalMinusRaw; type=bigWig; md5sum=e759d7207450fd4bd88007ba2b6e14b7; size=31M; replicate=161; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqProstateCellTotalPlusRaw.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=prostate; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000211; dateSubmitted=2009-09-23; dateResubmitted=2010-06-30; dateUnrestricted=2010-06-23; subId=1837; geoSampleAccession=GSM605626; labExpId=crg-61; bioRep=gen0161WC; labVersion=Produced by Hannon Lab; tableName=wgEncodeCshlShortRnaSeqProstateCellTotalPlusRaw; type=bigWig; md5sum=16fe0adb8bae85a625f9b391dc0a17a2; size=31M; replicate=161; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqProstateCellTotalRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=prostate; localization=cell; rnaExtract=shortTotal; protocol=TAP-Only; origAssembly=hg18; dataVersion=ENCODE Fall 2009 Freeze; dccAccession=wgEncodeEH000211; dateSubmitted=2009-09-23; dateUnrestricted=2010-06-23; subId=535; geoSampleAccession=GSM605626; labExpId=crg-61; bioRep=gen0161WC; labVersion=Produced by Hannon Lab; type=fastq; md5sum=cc247f23a9a364e8a763b65e3819e1fe; size=1.2G; replicate=161; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc812190217CellTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5943; labExpId=LID47240; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc812190217CellTapAlnRep2; type=bam; md5sum=48a6697fe3dc0cd94f39b724e106eb94; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc812190217CellTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5943; labExpId=LID47240; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc812190217CellTapAlnRep2; type=bai; md5sum=bccd180badee52f0b84a8fc2e6d5001d; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc812190217CellTapMinusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5943; geoSampleAccession=GSM977039; labExpId=LID47240; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc812190217CellTapMinusRep2; type=bigWig; md5sum=24a2fa2ceae1ee168ac2b4e9f6a2b149; size=8.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc812190217CellTapPlusRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5943; geoSampleAccession=GSM977039; labExpId=LID47240; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc812190217CellTapPlusRep2; type=bigWig; md5sum=290ae6a6f8e0b9601a627ea6dd26c4d3; size=8.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc812190217CellTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-03-01; dateUnrestricted=2012-11-29; subId=5943; geoSampleAccession=GSM977039; labExpId=LID47240; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=caf05711111e8ee1eb7c53eabd32c89a; size=7.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5921; labExpId=LID47239; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapAlnRep1; type=bam; md5sum=b446db64463a9384c4cda45e5d9652a8; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5921; labExpId=LID47239; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapAlnRep1; type=bai; md5sum=530a7f52c13b9152264f74007ef40bdd; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapMinusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5921; geoSampleAccession=GSM977039; labExpId=LID47239; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapMinusRep1; type=bigWig; md5sum=ba513f5ddf480ff57c08a313da701383; size=8.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapPlusRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5921; geoSampleAccession=GSM977039; labExpId=LID47239; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapPlusRep1; type=bigWig; md5sum=3544472f38227ceb3c7cff72e86ddae0; size=8.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmc9011302CellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5921; geoSampleAccession=GSM977039; labExpId=LID47239; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f3e7326613e42a1d5e8b444f18d931b6; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmcCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6498; geoSampleAccession=GSM977039; labExpId=LID47239,LID47240; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSkmcCellTapContigs; type=bedRnaElements; md5sum=2d189af090a69d12ea74beeb1227af92; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmcCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6756; geoSampleAccession=GSM977039; labExpId=LID47239,LID47240; bioRep=047WC,048WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=4a5d341e464de3df5d02713f65e9c1bd; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmcCellTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=1; donorId=9011302; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7162; geoSampleAccession=GSM977039; labExpId=LID47239; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=e626efea26ce639afd8489f29492f84a; size=289K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSkmcCellTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SkMC; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=2; donorId=8121902.17; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002884; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7183; geoSampleAccession=GSM977039; labExpId=LID47240; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=6481f9edad206a636ec4abc76baa13d9; size=284K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6509; geoSampleAccession=GSM973677; labExpId=LID46270,LID46271; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellCiptapContigs; type=bedRnaElements; md5sum=92f3e480e51c3bd21b2c389b8309fa0c; size=2.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6766; geoSampleAccession=GSM973677; labExpId=LID46270,LID46271; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=9b183da429ceb5a692b0d1599b64084d; size=1.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellCiptapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7257; geoSampleAccession=GSM973677; labExpId=LID46270; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=5d02ad62dd51ef04f4c1516ed1546c6a; size=545K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellCiptapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7214; geoSampleAccession=GSM973677; labExpId=LID46271; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=a1dd61686c4969fc59e2c9b0a366a7c7; size=561K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6507; geoSampleAccession=GSM973675; labExpId=LID46201,LID46202; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellContigs; type=bedRnaElements; md5sum=66ad5b8a8eadef0d1c5a2a815be702a3; size=533K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6764; geoSampleAccession=GSM973675; labExpId=LID46201,LID46202; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=74727aec4fb23c62bf38f7c8f6bce09a; size=1.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7243; geoSampleAccession=GSM973675; labExpId=LID46201; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d6705ee385ac4dc59a6ba11b55087174; size=519K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7250; geoSampleAccession=GSM973675; labExpId=LID46202; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=b289a0784487cc99753ee8e45af12df7; size=531K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5835; labExpId=LID46201; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep3; type=bam; md5sum=4fd6ec6230d2023dd4d2e4641f0af419; size=7.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5835; labExpId=LID46201; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep3; type=bai; md5sum=6af9ba670d1fa5df7458bea128959055; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5841; labExpId=LID46202; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep4; type=bam; md5sum=12425d1e129a4f4464e0926c192761e2; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5841; labExpId=LID46202; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalAlnRep4; type=bai; md5sum=b9c8cf3ada8c2b1dbed13e091b92820d; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5851; labExpId=LID46270; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep3; type=bam; md5sum=1d1415751c9891c48c1924f8e2583f67; size=6.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5851; labExpId=LID46270; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep3; type=bai; md5sum=50df83c5c8bb112285454eb021f32ba3; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5807; labExpId=LID46271; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep4; type=bam; md5sum=473d13817da9c7b18501f8574395dec5; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5807; labExpId=LID46271; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapAlnRep4; type=bai; md5sum=ed0de3a01d3ad7f907a2e6a79b2cca26; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5851; geoSampleAccession=GSM973677; labExpId=LID46270; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapMinusRep3; type=bigWig; md5sum=a3afd46c98c26b8a2b7384def62c0863; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5807; geoSampleAccession=GSM973677; labExpId=LID46271; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapMinusRep4; type=bigWig; md5sum=67fef02b619bf092bd30ad800d2b27f4; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5851; geoSampleAccession=GSM973677; labExpId=LID46270; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapPlusRep3; type=bigWig; md5sum=db8a93f2b095be407acd1544c9b8c0a8; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5807; geoSampleAccession=GSM973677; labExpId=LID46271; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapPlusRep4; type=bigWig; md5sum=771231f1fbedd8a67c3411f41e863309; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5851; geoSampleAccession=GSM973677; labExpId=LID46270; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=6cb67dc3745c7d0f4df744d52558e015; size=6.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalCiptapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002616; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5807; geoSampleAccession=GSM973677; labExpId=LID46271; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=092f047fa76c9d9f05c8e6246101a6e4; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5835; geoSampleAccession=GSM973675; labExpId=LID46201; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalMinusRep3; type=bigWig; md5sum=0c2e07cbdd52d6fb94168397c7ef055d; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5841; geoSampleAccession=GSM973675; labExpId=LID46202; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalMinusRep4; type=bigWig; md5sum=2f6ad29e6cce9487a91dfbbff66dfc2c; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5835; geoSampleAccession=GSM973675; labExpId=LID46201; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalPlusRep3; type=bigWig; md5sum=57fc6d463486306d6a76910211c413d0; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5841; geoSampleAccession=GSM973675; labExpId=LID46202; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalPlusRep4; type=bigWig; md5sum=eaad2b9ac38b1e9429a0822811e9cc8a; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5835; geoSampleAccession=GSM973675; labExpId=LID46201; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d3f6834382adaece30b7c8cbd4a2e549; size=4.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002622; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5841; geoSampleAccession=GSM973675; labExpId=LID46202; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5f288c81e9d756fd87a336f85be80ab1; size=4.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5802; labExpId=LID46956; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep3; type=bam; md5sum=fc7af1fb4d1ed11d519f12875d8fe7c6; size=14G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5802; labExpId=LID46956; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep3; type=bai; md5sum=3092cdf3fe86df317c5da5b3c89e22de; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5821; labExpId=LID46957; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep4; type=bam; md5sum=224f5e071051bbc4cb7cdaf66295a9bf; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5821; labExpId=LID46957; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapAlnRep4; type=bai; md5sum=dc65362e7011cae49679045ff5798f57; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5802; geoSampleAccession=GSM973667; labExpId=LID46956; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapMinusRep3; type=bigWig; md5sum=3d2472046a08c885ab8921fd2ab77f61; size=6.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5821; geoSampleAccession=GSM973667; labExpId=LID46957; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapMinusRep4; type=bigWig; md5sum=9bb0df5aa571c7563d6be3bcd1984360; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5802; geoSampleAccession=GSM973667; labExpId=LID46956; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapPlusRep3; type=bigWig; md5sum=d36d48008352678e6e4c3be5b2c6cc37; size=6.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5821; geoSampleAccession=GSM973667; labExpId=LID46957; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellShorttotalTapPlusRep4; type=bigWig; md5sum=d0c6c70b0a978ff98c4d42fdc39358d0; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5635; geoSampleAccession=GSM973667; labExpId=LID46956; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=f847a3c3496cf02d885637359495e58d; size=140K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5651; geoSampleAccession=GSM973667; labExpId=LID46957; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=37cfff8c925cf69be3ab65b07118580a; size=142K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5802; geoSampleAccession=GSM973667; labExpId=LID46956; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d45c89633668999f026de3a9f1ae02a3; size=8.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5821; geoSampleAccession=GSM973667; labExpId=LID46957; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=05f9a692f03f89bbfacec01618406a53; size=8.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6520; geoSampleAccession=GSM973667; labExpId=LID46956,LID46957; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCellTapContigs; type=bedRnaElements; md5sum=ed07ae10f58665ce19d32f7072c9627b; size=729K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCellTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cell; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002470; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6777; geoSampleAccession=GSM973667; labExpId=LID46956,LID46957; bioRep=085WC,086WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=57f0ab2cc4307aabfce8b2ae2de7b33e; size=1.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6499; geoSampleAccession=GSM973692; labExpId=LID46274,LID46275; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolCiptapContigs; type=bedRnaElements; md5sum=877f6883e4a3a6a1bfe468a28296b750; size=2.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6757; geoSampleAccession=GSM973692; labExpId=LID46274,LID46275; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=c1aa0d14bf9b692aed9e5b7798d1c5e0; size=1.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolCiptapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7241; geoSampleAccession=GSM973692; labExpId=LID46274; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=8d198c66bc99e068333190188d1eddab; size=556K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolCiptapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7217; geoSampleAccession=GSM973692; labExpId=LID46275; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=41bf2d876c5e250919385af3f1c5d40c; size=572K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6850; geoSampleAccession=GSM973666; labExpId=LID46205,LID46206; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolContigs; type=bedRnaElements; md5sum=62a6b9820af2abbb54bf26cdf00aac42; size=721K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6830; geoSampleAccession=GSM973666; labExpId=LID46205,LID46206; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=5759485570e129403b394921d1ef1c3f; size=2.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7229; geoSampleAccession=GSM973666; labExpId=LID46205; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=78446b98251f6fd5c4ed5dd676eb575d; size=499K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7224; geoSampleAccession=GSM973666; labExpId=LID46206; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=6554c88fc6e5e14eebdcf4eda947cfe3; size=521K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5817; labExpId=LID46205; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep3; type=bam; md5sum=2027970fe78fb5a82f81cc0b74d6f127; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5817; labExpId=LID46205; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep3; type=bai; md5sum=270f2a41c4c859b9e3ea95ae3e44cba9; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5815; labExpId=LID46206; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep4; type=bam; md5sum=21fbea7858b7b304c21daccde1a1525a; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5815; labExpId=LID46206; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalAlnRep4; type=bai; md5sum=09852bd2f5676f71e8dddf6dec68e188; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5830; labExpId=LID46274; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep3; type=bam; md5sum=4f763d907c4b48c1fe5d581a85e61b42; size=11G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5830; labExpId=LID46274; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep3; type=bai; md5sum=1dce4eaaad8fe5cb39d6b7673cd04ca8; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5809; labExpId=LID46275; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep4; type=bam; md5sum=1a1a00f28023b8041084772a0d5c03cf; size=9.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5809; labExpId=LID46275; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapAlnRep4; type=bai; md5sum=d528fed0fab9c222cc69e3dc85d884f2; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5830; geoSampleAccession=GSM973692; labExpId=LID46274; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapMinusRep3; type=bigWig; md5sum=dd40687a2b33776153619720d228886d; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5809; geoSampleAccession=GSM973692; labExpId=LID46275; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapMinusRep4; type=bigWig; md5sum=af9c3bff402608be771e28ddc83f11ba; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5830; geoSampleAccession=GSM973692; labExpId=LID46274; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapPlusRep3; type=bigWig; md5sum=7098bf93f9bc9ebae4b8f4a3403ddf3d; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5809; geoSampleAccession=GSM973692; labExpId=LID46275; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapPlusRep4; type=bigWig; md5sum=887e8628f61f35aad19f8259ae35cdda; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5830; geoSampleAccession=GSM973692; labExpId=LID46274; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b072a301d8b627d109226344dc50e943; size=8.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalCiptapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002614; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5809; geoSampleAccession=GSM973692; labExpId=LID46275; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a54b0b354dcde8d5eeee06f7db3d48d6; size=7.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5817; geoSampleAccession=GSM973666; labExpId=LID46205; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalMinusRep3; type=bigWig; md5sum=9394d3e249861f85553a1a11aa7fb66a; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5815; geoSampleAccession=GSM973666; labExpId=LID46206; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalMinusRep4; type=bigWig; md5sum=17d4d0e62c182a5a895dadcc6614c03c; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5817; geoSampleAccession=GSM973666; labExpId=LID46205; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalPlusRep3; type=bigWig; md5sum=402b239c64d611644cd04706edcc8b3e; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5815; geoSampleAccession=GSM973666; labExpId=LID46206; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalPlusRep4; type=bigWig; md5sum=0c23fa23bc42148dade9725ef640f9b5; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5817; geoSampleAccession=GSM973666; labExpId=LID46205; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1a93c5273bd991e9a3765076cec7d5e9; size=5.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002612; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5815; geoSampleAccession=GSM973666; labExpId=LID46206; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d7828b4ec8e758baeb2fe2bdb1760efe; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5852; labExpId=LID46958; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep3; type=bam; md5sum=85074511d8b807efad9543ab857c216c; size=9.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5852; labExpId=LID46958; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep3; type=bai; md5sum=574bb94b500edc6afa46fad3c4519653; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5850; labExpId=LID46959; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep4; type=bam; md5sum=0f829f876586958c1411302849989623; size=12G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5850; labExpId=LID46959; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapAlnRep4; type=bai; md5sum=cc2e2158188d4bfb7aa512570119e22c; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5852; geoSampleAccession=GSM973688; labExpId=LID46958; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapMinusRep3; type=bigWig; md5sum=6bd0c3d82fc576205663dba3e4b9be80; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5850; geoSampleAccession=GSM973688; labExpId=LID46959; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapMinusRep4; type=bigWig; md5sum=6185d7314f33f59afa48e49bb2159720; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5852; geoSampleAccession=GSM973688; labExpId=LID46958; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapPlusRep3; type=bigWig; md5sum=db88f1dd56438d1e2af062fd763261cf; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5850; geoSampleAccession=GSM973688; labExpId=LID46959; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapPlusRep4; type=bigWig; md5sum=4790d70621cab766e8d916de5a9b7bf5; size=6.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5852; geoSampleAccession=GSM973688; labExpId=LID46958; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c3ac966b599a555030c81c306bfd20bb; size=7.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5850; geoSampleAccession=GSM973688; labExpId=LID46959; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=988d932e162e707fb4b417f40a494854; size=7.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6521; geoSampleAccession=GSM973688; labExpId=LID46958,LID46959; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshCytosolTapContigs; type=bedRnaElements; md5sum=4802f73ec8d952218d04a70185600751; size=659K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6779; geoSampleAccession=GSM973688; labExpId=LID46958,LID46959; bioRep=085C,086C; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=9a053f397ca4d01815f447bd057f0b32; size=1.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7184; geoSampleAccession=GSM973688; labExpId=LID46958; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=b52fdebef426c66d6d9d00d2073c77e2; size=185K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshCytosolTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=cytosol; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002468; dateSubmitted=2012-06-28; dateUnrestricted=2013-03-28; subId=7182; geoSampleAccession=GSM973688; labExpId=LID46959; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d86c8f02730cf013b00cc0f61fe0ae1f; size=187K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusCiptapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6844; geoSampleAccession=GSM973663; labExpId=LID46272,LID46273; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusCiptapContigs; type=bedRnaElements; md5sum=f80dbc0c169c4a42b9a9584ef2477c46; size=1.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusCiptapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-06-20; dateUnrestricted=2013-03-20; subId=7110; geoSampleAccession=GSM973663; labExpId=LID46272,LID46273; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=071525eb413a18959bbdb3dd2a1bacbc; size=1.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusCiptapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7236; geoSampleAccession=GSM973663; labExpId=LID46272; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=2080cadd130b3fcf2bd58acfddc72656; size=635K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusCiptapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7210; geoSampleAccession=GSM973663; labExpId=LID46273; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=d352ce8eb1506a2f8b45ff40bd4ba46b; size=654K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6502; geoSampleAccession=GSM973665; labExpId=LID46203,LID46204; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusContigs; type=bedRnaElements; md5sum=d34c139efbb7e3229f5060253109bb7c; size=787K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; dataVersion=ENCODE Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-04-23; dateUnrestricted=2013-01-23; subId=6840; geoSampleAccession=GSM973665; labExpId=LID46203,LID46204; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=cba37770f5474cbddf66de32a1cbbe23; size=1.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7234; geoSampleAccession=GSM973665; labExpId=LID46203; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=399498dec0e2513e01fefc4fbf214aa4; size=577K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7223; geoSampleAccession=GSM973665; labExpId=LID46204; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=19b6ec4dbdd828598019c9a17d1fd059; size=609K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5824; labExpId=LID46203; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep3; type=bam; md5sum=2c9ce27495cdf960e7ed04c55956669a; size=5.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5824; labExpId=LID46203; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep3; type=bai; md5sum=e5c17a936232589ab1429d2e75d268d6; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5812; labExpId=LID46204; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep4; type=bam; md5sum=7bd1811fb1576aa2cea51568e50d1474; size=6.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5812; labExpId=LID46204; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalAlnRep4; type=bai; md5sum=fc28d364f2a1448e74886cf80b7cacbf; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5827; labExpId=LID46272; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep3; type=bam; md5sum=c9ff3c559bc2c575f66249fd1a2b1418; size=6.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5827; labExpId=LID46272; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep3; type=bai; md5sum=8edd07a65536b6645e4d1a2a83310793; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5801; labExpId=LID46273; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep4; type=bam; md5sum=383d85117e159644d721c9f9fee8068e; size=7.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5801; labExpId=LID46273; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapAlnRep4; type=bai; md5sum=eb8c63f2c7bfbfe96ed8fdea5202afea; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5827; geoSampleAccession=GSM973663; labExpId=LID46272; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapMinusRep3; type=bigWig; md5sum=a755c998e564b054c1fa9384c16c67df; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5801; geoSampleAccession=GSM973663; labExpId=LID46273; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapMinusRep4; type=bigWig; md5sum=fc0147e2883ce34fb534457a0c04f54b; size=8.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5827; geoSampleAccession=GSM973663; labExpId=LID46272; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapPlusRep3; type=bigWig; md5sum=89a3479bc74c7e14ddd0bb36d8a2cd1c; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5801; geoSampleAccession=GSM973663; labExpId=LID46273; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapPlusRep4; type=bigWig; md5sum=f60039a9437b1fe95e5a76b7d031d38a; size=8.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-18; subId=5827; geoSampleAccession=GSM973663; labExpId=LID46272; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=65c9c7c11b2e3dd10715caf398852c09; size=4.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalCiptapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=CIP-TAP; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002615; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5801; geoSampleAccession=GSM973663; labExpId=LID46273; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cbd496c776151651e0f446c014115d57; size=6.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5824; geoSampleAccession=GSM973665; labExpId=LID46203; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalMinusRep3; type=bigWig; md5sum=bc006caf41a44592e8af89934d342983; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5812; geoSampleAccession=GSM973665; labExpId=LID46204; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalMinusRep4; type=bigWig; md5sum=2ab2b425c707645a4d21d48a0ad34578; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5824; geoSampleAccession=GSM973665; labExpId=LID46203; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalPlusRep3; type=bigWig; md5sum=61db4ee812ed8ce68a69564530a6f633; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5812; geoSampleAccession=GSM973665; labExpId=LID46204; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalPlusRep4; type=bigWig; md5sum=5823a0412d984bc856be9a0057da152f; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5824; geoSampleAccession=GSM973665; labExpId=LID46203; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=89daa93a432309c2a3b4ad31a5c0ce33; size=4.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=None; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002613; dateSubmitted=2012-02-18; dateUnrestricted=2012-11-18; subId=5812; geoSampleAccession=GSM973665; labExpId=LID46204; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b17160061e8464fed65d8ae6cc7a7654; size=5.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5848; labExpId=LID46960; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep3; type=bam; md5sum=d197311be6e867517f61f965e939ec85; size=13G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5848; labExpId=LID46960; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep3; type=bai; md5sum=39bdee7d7e148ae137bcf700f0fc7918; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5932; labExpId=LID46961; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep4; type=bam; md5sum=e44b6993cdabe47adb65c24095281166; size=5.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5932; labExpId=LID46961; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapAlnRep4; type=bai; md5sum=4d08c26638b0529df5ba2b75ba40806c; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapMinusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5848; geoSampleAccession=GSM973689; labExpId=LID46960; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapMinusRep3; type=bigWig; md5sum=4c3553ba1d8b162de09dde6adc67be77; size=6.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapMinusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5932; geoSampleAccession=GSM973689; labExpId=LID46961; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapMinusRep4; type=bigWig; md5sum=060f6a4c414e2db3e245a4ab11675ddf; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapPlusRep3.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5848; geoSampleAccession=GSM973689; labExpId=LID46960; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapPlusRep3; type=bigWig; md5sum=431eb3e856c021b99d7c4456474bb833; size=6.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapPlusRep4.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5932; geoSampleAccession=GSM973689; labExpId=LID46961; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapPlusRep4; type=bigWig; md5sum=225d5c29d8eb2f09154dbd1f310a216e; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapProtocolRep3.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5647; geoSampleAccession=GSM973689; labExpId=LID46960; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=1f9dbef6e85ab924f35a31ed7b230b67; size=151K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapProtocolRep4.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-14; dateUnrestricted=2012-11-14; subId=5639; geoSampleAccession=GSM973689; labExpId=LID46961; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=pdf; md5sum=a2f6ab85a32bf2af13b0fda3f1caf65a; size=148K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-19; dateUnrestricted=2012-11-19; subId=5848; geoSampleAccession=GSM973689; labExpId=LID46960; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=19498563e2b6c346b06f1a854ee67480; size=9.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusShorttotalTapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; subId=5932; geoSampleAccession=GSM973689; labExpId=LID46961; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=47833d7a17cef60c7b16b93e9af3561e; size=4.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7260; geoSampleAccession=GSM973689; labExpId=LID46960,LID46961; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeCshlShortRnaSeqSknshNucleusTapContigs; type=bedRnaElements; md5sum=b1c8fe57efcebca2032ac1c45b261faa; size=501K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshNucleusTapExonsGencV10.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV10; cell=SK-N-SH; localization=nucleus; rnaExtract=shortTotal; readType=1x101; protocol=TAP-Only; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002469; dateSubmitted=2012-06-29; dateUnrestricted=2013-03-29; subId=7260; geoSampleAccession=GSM973689; labExpId=LID46960,LID46961; bioRep=085N,086N; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; type=gtf; md5sum=457ff9c2dfe65e0247f708cfbb278fe2; size=1.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3376; labExpId=LID20747; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep1; type=bam; md5sum=5cadbe1fc66d9ae3f761c1d790f02d15; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3376; labExpId=LID20747; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep1; type=bai; md5sum=f0b7aa64a574189b47c640142d077b30; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3377; labExpId=LID20748; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep2; type=bam; md5sum=913ee61cd5a672cd3a549a233ae2b156; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3377; labExpId=LID20748; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapAlnRep2; type=bai; md5sum=101fc9a22f36362cffbb19f030c12b29; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapContigs.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Contigs; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-07-12; dateResubmitted=2012-02-07; dateUnrestricted=2012-04-12; subId=4471; geoSampleAccession=GSM897070; labExpId=LID20747,LID20748; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapContigs; type=bedRnaElements; md5sum=cfc763c1c3e0733e4b198094d1b31438; size=613K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapExonsGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=ExonsGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4471; geoSampleAccession=GSM897070; labExpId=LID20747,LID20748; bioRep=019WC,020WC; labVersion=iIDR; seqPlatform=Illumina_GA2x; type=gtf; md5sum=bdf7c62de15dd40edeaafc705ea498f3; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3376; geoSampleAccession=GSM897070; labExpId=LID20747; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapMinusRawRep1; type=bigWig; md5sum=82c83d331341e068b130f7e142ee1a69; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3377; geoSampleAccession=GSM897070; labExpId=LID20748; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapMinusRawRep2; type=bigWig; md5sum=5566d962153a68b78fb351c5d69aef13; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3376; geoSampleAccession=GSM897070; labExpId=LID20747; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapPlusRawRep1; type=bigWig; md5sum=b1f6556ea8d2922511c5a3e2126787ef; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3377; geoSampleAccession=GSM897070; labExpId=LID20748; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapPlusRawRep2; type=bigWig; md5sum=1c598500a448a72b8b514b855baaba7d; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapProtocolRep1.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5679; geoSampleAccession=GSM897070; labExpId=LID20747; bioRep=019WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=10a126dd3b95b8011132005d2b3c205c; size=318K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapProtocolRep2.pdf.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=Protocol; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2012-02-15; dateUnrestricted=2011-10-19; subId=5692; geoSampleAccession=GSM897070; labExpId=LID20748; bioRep=020WC; seqPlatform=Illumina_GA2x; type=pdf; md5sum=4c08caaef8a04cbda0c569b21dd7c666; size=317K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3376; geoSampleAccession=GSM897070; labExpId=LID20747; bioRep=019WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=aca2e59982611d4a7dff78c742e72301; size=984M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeCshlShortRnaSeq/releaseLatest/wgEncodeCshlShortRnaSeqSknshraCellShorttotalTapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=CSHL; composite=wgEncodeCshlShortRnaSeq; dataType=RnaSeq; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=shortTotal; readType=1x36; protocol=TAP-Only; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001094; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3377; geoSampleAccession=GSM897070; labExpId=LID20748; bioRep=020WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=9e4f1246736d063a896c3172acc04a09; size=924M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6412; labExpId=RHA009; bioRep=087WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapAlnRep3; type=bam; md5sum=01cecc1be0758fb805ccaf24218b36db; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6412; labExpId=RHA009; bioRep=087WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapAlnRep3; type=bai; md5sum=2dadb34a602e1d6b59d7459bf6696a99; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6414; labExpId=RHA010; bioRep=088WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapAlnRep4; type=bam; md5sum=ef6bcf7408b4521936b77b4b5a55c96f; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6414; labExpId=RHA010; bioRep=088WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapAlnRep4; type=bai; md5sum=e6c786835662438f67f5203fa436a146; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7271; geoSampleAccession=GSM1006902; labExpId=RHA009,RHA010; bioRep=087WC,088WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapClusters; type=bedCluster; md5sum=5389c1c4d1cad7da294fd38074dbd4c4; size=5.3M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6412; geoSampleAccession=GSM1006902; labExpId=RHA009; bioRep=087WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=02cabf541367a3cbdae1927d3c8101ad; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6414; geoSampleAccession=GSM1006902; labExpId=RHA010; bioRep=088WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=03f5501cc9a9dddc658cc943ba1160c5; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6412; geoSampleAccession=GSM1006902; labExpId=RHA009; bioRep=087WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=52a67c9c28603bb079bbed2bb28e5d7f; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6414; geoSampleAccession=GSM1006902; labExpId=RHA010; bioRep=088WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=e8e6248f4cdd00f7f8b9aa664fe00b30; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6412; geoSampleAccession=GSM1006902; labExpId=RHA009; bioRep=087WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapMinusRawRep3; type=bigWig; md5sum=4cc175aa25b9f9bc6214e91599610b04; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6414; geoSampleAccession=GSM1006902; labExpId=RHA010; bioRep=088WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapMinusRawRep4; type=bigWig; md5sum=0dc46f2227d8b2e0cefc3794f21a76bf; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6412; geoSampleAccession=GSM1006902; labExpId=RHA009; bioRep=087WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapPlusRawRep3; type=bigWig; md5sum=57630f684575ffaaba6e549a299077c8; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CellPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=A549; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002929; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6414; geoSampleAccession=GSM1006902; labExpId=RHA010; bioRep=088WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CellPapPlusRawRep4; type=bigWig; md5sum=c309d71f61b496b4907c485e10b2443c; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6409; labExpId=RHA011; bioRep=087C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapAlnRep3; type=bam; md5sum=b07798aeb4399b24706b853c28b2fc89; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6409; labExpId=RHA011; bioRep=087C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapAlnRep3; type=bai; md5sum=7b5e02d4e14c05d2394395707e6bd518; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6404; labExpId=RHA012; bioRep=088C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapAlnRep4; type=bam; md5sum=c99dffdc175998518a08a3c8ec3e3831; size=5.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6404; labExpId=RHA012; bioRep=088C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapAlnRep4; type=bai; md5sum=484a6d7652d69247a04f50b0748ecc9e; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7274; geoSampleAccession=GSM1006909; labExpId=RHA011,RHA012; bioRep=087C,088C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapClusters; type=bedCluster; md5sum=b917affee7662ad988b67af280d33aeb; size=4.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6409; geoSampleAccession=GSM1006909; labExpId=RHA011; bioRep=087C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=43672868c4d6958ad2e4d0f763c2c3be; size=2.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6404; geoSampleAccession=GSM1006909; labExpId=RHA012; bioRep=088C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5f6ca7d7a305acdd7872bf4d2b39ae55; size=4.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6409; geoSampleAccession=GSM1006909; labExpId=RHA011; bioRep=087C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1178867a0ccf9cb64603b518fa52dafd; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6404; geoSampleAccession=GSM1006909; labExpId=RHA012; bioRep=088C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=7ad2176ef0ee561f7bad61b027d9f0a3; size=3.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6409; geoSampleAccession=GSM1006909; labExpId=RHA011; bioRep=087C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapMinusRawRep3; type=bigWig; md5sum=cde3550b00463fe64a5a382fea9857cb; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6404; geoSampleAccession=GSM1006909; labExpId=RHA012; bioRep=088C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapMinusRawRep4; type=bigWig; md5sum=3016b0fbd14d7dc4a565f98ffc7e5dbc; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6409; geoSampleAccession=GSM1006909; labExpId=RHA011; bioRep=087C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapPlusRawRep3; type=bigWig; md5sum=29a7cde0305d472d06dbb201b6b0f1b1; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549CytosolPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002927; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6404; geoSampleAccession=GSM1006909; labExpId=RHA012; bioRep=088C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549CytosolPapPlusRawRep4; type=bigWig; md5sum=2f8059b8fb75b33d0f3c33cec605bf5b; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6405; labExpId=RHA013; bioRep=087N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapAlnRep3; type=bam; md5sum=ad1a4828fd993d8085614132a6b754a5; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6405; labExpId=RHA013; bioRep=087N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapAlnRep3; type=bai; md5sum=9071f6b836d3472fc5cd2f191c26ae31; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6408; labExpId=RHA014; bioRep=088N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapAlnRep4; type=bam; md5sum=56eea9bedd4cae6c745680db799f0543; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6408; labExpId=RHA014; bioRep=088N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapAlnRep4; type=bai; md5sum=a28c09b604568bd3e53072f8d1f54bab; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7266; geoSampleAccession=GSM1006903; labExpId=RHA013,RHA014; bioRep=087N,088N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapClusters; type=bedCluster; md5sum=d0c43f00cb45cbeb8bd891621af892ff; size=4.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6405; geoSampleAccession=GSM1006903; labExpId=RHA013; bioRep=087N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=92558cdcf454cdeea5b009d91f07d8a2; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6408; geoSampleAccession=GSM1006903; labExpId=RHA014; bioRep=088N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0fa1fd8a7c194b410d1784f4fb20f18a; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6405; geoSampleAccession=GSM1006903; labExpId=RHA013; bioRep=087N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=fc621a7dce30b184afc7832f8ab316e1; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6408; geoSampleAccession=GSM1006903; labExpId=RHA014; bioRep=088N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=812307dda46c44681502850f9dc520c1; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6405; geoSampleAccession=GSM1006903; labExpId=RHA013; bioRep=087N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapMinusRawRep3; type=bigWig; md5sum=22513fce1cbd14131a70526fb037bc6a; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6408; geoSampleAccession=GSM1006903; labExpId=RHA014; bioRep=088N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapMinusRawRep4; type=bigWig; md5sum=570c86a891c89eb744e8f0bae13461f4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6405; geoSampleAccession=GSM1006903; labExpId=RHA013; bioRep=087N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapPlusRawRep3; type=bigWig; md5sum=2266fed91fa7e54459bb5cdd44024233; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetA549NucleusPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002928; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6408; geoSampleAccession=GSM1006903; labExpId=RHA014; bioRep=088N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetA549NucleusPapPlusRawRep4; type=bigWig; md5sum=44e45648287353e37b422347ec74e970; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1979; labExpId=DHG001; bioRep=gen0105C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapAlnRep1; type=bam; md5sum=02bef90485e98b5397a70af77f3fa245; size=246M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1979; labExpId=DHG001; bioRep=gen0105C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapAlnRep1; type=bai; md5sum=b1e134a1fb04a188782052ed4de80394; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapAlnRep1V2.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2011-11-09; dateResubmitted=2010-07-22; dateUnrestricted=2012-08-09; subId=5098; labExpId=IHG024; bioRep=gen0107C; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapAlnRep1V2; type=bam; md5sum=017e887899fc0f28b36cb71fe498f583; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapAlnRep1V2.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2011-11-09; dateResubmitted=2010-07-22; dateUnrestricted=2012-08-09; subId=5098; labExpId=IHG024; bioRep=gen0107C; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapAlnRep1V2; type=bai; md5sum=798daa5f9e1db8fe485ef3c4290a46c6; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1979; labExpId=DHG001; bioRep=gen0105C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapClustersRep1; type=bed; md5sum=bd1c3ae97d07de1a5debd9d6889622b6; size=593K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapClustersRep1V2.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2011-11-09; dateResubmitted=2010-03-08; dateUnrestricted=2012-08-09; subId=5098; geoSampleAccession=GSM830535; labExpId=IHG024; bioRep=gen0107C; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapClustersRep1V2; type=bed; md5sum=48763242783e077fd5ddd697d43b6969; size=7.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; labExpId=DHG001; bioRep=gen0105C; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=77d2d0ac459f83a4c223f55af5036f1d; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapFastqRd1Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2011-11-09; dateResubmitted=2009-11-17; dateUnrestricted=2012-08-09; subId=5098; geoSampleAccession=GSM830535; labExpId=IHG024; bioRep=gen0107C; labVersion=clone-free; seqPlatform=Illumina_GA2; type=fastq; md5sum=b54da1aa919da0cf1b818cc563de09dd; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; labExpId=DHG001; bioRep=gen0105C; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=d53b25727740a365620efc52c2607f97; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapFastqRd2Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2011-11-09; dateResubmitted=2009-11-17; dateUnrestricted=2012-08-09; subId=5098; geoSampleAccession=GSM830535; labExpId=IHG024; bioRep=gen0107C; labVersion=clone-free; seqPlatform=Illumina_GA2; type=fastq; md5sum=054624748b11266dc4bef4cdd6e611ed; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapMinusRawRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2011-11-09; dateResubmitted=2010-07-22; dateUnrestricted=2012-08-09; subId=5098; geoSampleAccession=GSM830535; labExpId=IHG024; bioRep=gen0107C; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapMinusRawRep1V2; type=bigWig; md5sum=2e602986507fa4a74730a2c85346b9cc; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1979; labExpId=DHG001; bioRep=gen0105C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapMinusRawSigRep1; type=bigWig; md5sum=d11593267f573d8b2ef5879719005872; size=58M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapPlusRawRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2011-11-09; dateResubmitted=2010-07-22; dateUnrestricted=2012-08-09; subId=5098; geoSampleAccession=GSM830535; labExpId=IHG024; bioRep=gen0107C; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapPlusRawRep1V2; type=bigWig; md5sum=39a6558646cee0174798cf41003ac477; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878CytosolPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000248; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1979; labExpId=DHG001; bioRep=gen0105C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878CytosolPapPlusRawSigRep1; type=bigWig; md5sum=711a4823129f2b4fa3c470387dfc537d; size=58M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000249; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1980; labExpId=DHG002; bioRep=gen0111N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878NucleusPapAlnRep1; type=bam; md5sum=f0d5c607ffef0469a68169066d68f69e; size=242M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000249; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1980; labExpId=DHG002; bioRep=gen0111N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878NucleusPapAlnRep1; type=bai; md5sum=b55a759b767b658186f75b0b51756f0e; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878NucleusPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000249; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1980; geoSampleAccession=GSM830534; labExpId=DHG002; bioRep=gen0111N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878NucleusPapClustersRep1; type=bed; md5sum=c55682f7a3bf37d20d6af81fe5f0842a; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000249; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830534; labExpId=DHG002; bioRep=gen0111N; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=0ed640ba88d1e5cb702fd41ed0f26cc3; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000249; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830534; labExpId=DHG002; bioRep=gen0111N; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=015408fe68f41e10ab0993e1a152f49d; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878NucleusPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000249; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1980; geoSampleAccession=GSM830534; labExpId=DHG002; bioRep=gen0111N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878NucleusPapMinusRawSigRep1; type=bigWig; md5sum=fb50bcc9b26b9ff2bfb3b67f06f0be51; size=132M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetGm12878NucleusPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000249; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1980; geoSampleAccession=GSM830534; labExpId=DHG002; bioRep=gen0111N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetGm12878NucleusPapPlusRawSigRep1; type=bigWig; md5sum=89e86a431bf98d5757b90fa07cfec440; size=132M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetH1hescCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000250; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4032; labExpId=IHE001; bioRep=gen0114WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetH1hescCellPapAlnRep1; type=bam; md5sum=416a7d6780983f69856a001ca3136998; size=2.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetH1hescCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000250; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4032; labExpId=IHE001; bioRep=gen0114WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetH1hescCellPapAlnRep1; type=bai; md5sum=3d348f18039f31cfb375b1f9b3722e95; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetH1hescCellPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000250; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4032; geoSampleAccession=GSM830532; labExpId=IHE001; bioRep=gen0114WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetH1hescCellPapClustersRep1; type=bed; md5sum=ed52fdd87447ac04c2a67c8036e617fa; size=3.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetH1hescCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000250; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4032; geoSampleAccession=GSM830532; labExpId=IHE001; bioRep=gen0114WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=fcd1ef8ffb346888bd36e0830dec1f48; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetH1hescCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000250; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4032; geoSampleAccession=GSM830532; labExpId=IHE001; bioRep=gen0114WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=daa6a09e3a88a84c06e9bffd922088cf; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetH1hescCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000250; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4032; geoSampleAccession=GSM830532; labExpId=IHE001; bioRep=gen0114WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetH1hescCellPapMinusRawRep1; type=bigWig; md5sum=d91f35ed4314f2eeaae866531726c34f; size=8.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetH1hescCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000250; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4032; geoSampleAccession=GSM830532; labExpId=IHE001; bioRep=gen0114WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetH1hescCellPapPlusRawRep1; type=bigWig; md5sum=ca0c00c6c7ee77c2d4eb69dbb6ae58ae; size=8.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001744; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=4025; labExpId=RHH014; bioRep=011WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CellPapAlnRep1; type=bam; md5sum=aa7805481ffe6c9b43d9652b05051ef9; size=4.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001744; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=4025; labExpId=RHH014; bioRep=011WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CellPapAlnRep1; type=bai; md5sum=dced77dd7838d36fe7359f1309e35c9e; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CellPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001744; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=4025; geoSampleAccession=GSM830530; labExpId=RHH014; bioRep=011WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CellPapClustersRep1; type=bed; md5sum=b1c071be3fab2f36af1ee504775c1ea6; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001744; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=4025; geoSampleAccession=GSM830530; labExpId=RHH014; bioRep=011WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=34c7a52501a75d010613734311b07def; size=3.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001744; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=4025; geoSampleAccession=GSM830530; labExpId=RHH014; bioRep=011WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=4ed83de07bd6528b08652336116370f5; size=3.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001744; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=4025; geoSampleAccession=GSM830530; labExpId=RHH014; bioRep=011WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CellPapMinusRawRep1; type=bigWig; md5sum=3e1e497e9edea480337743072e0b5a08; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001744; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=4025; geoSampleAccession=GSM830530; labExpId=RHH014; bioRep=011WC; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CellPapPlusRawRep1; type=bigWig; md5sum=18c28a22ee4e2601ab28e8d69c46e4a8; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000268; dateSubmitted=2009-12-05; dateResubmitted=2011-05-17; dateUnrestricted=2010-09-05; subId=4617; labExpId=RHH002; bioRep=gen0122C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CytosolPapAlnRep1; type=bam; md5sum=6a39b4266713df479d2636811c341943; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000268; dateSubmitted=2009-12-05; dateResubmitted=2011-05-17; dateUnrestricted=2010-09-05; subId=4617; labExpId=RHH002; bioRep=gen0122C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CytosolPapAlnRep1; type=bai; md5sum=27d520753752d64d6cc45f2cdb3f9a72; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CytosolPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000268; dateSubmitted=2009-12-05; dateResubmitted=2011-05-17; dateUnrestricted=2010-09-05; subId=4617; geoSampleAccession=GSM830533; labExpId=RHH002; bioRep=gen0122C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CytosolPapClustersRep1; type=bed; md5sum=655b9edfd19654af2ed95127ff0e8085; size=1.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000268; dateSubmitted=2009-12-05; dateResubmitted=2011-05-17; dateUnrestricted=2010-09-05; subId=4617; geoSampleAccession=GSM830533; labExpId=RHH002; bioRep=gen0122C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=0fe2f6902a856f4a89a6208bfc45f3b4; size=2.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000268; dateSubmitted=2009-12-05; dateResubmitted=2011-05-17; dateUnrestricted=2010-09-05; subId=4617; geoSampleAccession=GSM830533; labExpId=RHH002; bioRep=gen0122C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=06475ca109055b147953b22d1ce8a0d6; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CytosolPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000268; dateSubmitted=2009-12-05; dateResubmitted=2011-05-17; dateUnrestricted=2010-09-05; subId=4617; geoSampleAccession=GSM830533; labExpId=RHH002; bioRep=gen0122C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CytosolPapMinusRawRep1; type=bigWig; md5sum=03eeca2f8ae0966eafb5a875fae5e34d; size=27M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3CytosolPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000268; dateSubmitted=2009-12-05; dateResubmitted=2011-05-17; dateUnrestricted=2010-09-05; subId=4617; geoSampleAccession=GSM830533; labExpId=RHH002; bioRep=gen0122C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3CytosolPapPlusRawRep1; type=bigWig; md5sum=594b2cc41bb985e13293e859f51a1312; size=27M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3NucleusPapAlnRep1V2.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000267; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5100; labExpId=RHH004; bioRep=gen0124N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3NucleusPapAlnRep1V2; type=bam; md5sum=519c3c36bf919a414d2ef80d94089bc6; size=5.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3NucleusPapAlnRep1V2.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000267; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5100; labExpId=RHH004; bioRep=gen0124N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3NucleusPapAlnRep1V2; type=bai; md5sum=b34adfed388ea1a714e653a53a5b8e88; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3NucleusPapClustersRep1V2.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000267; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5100; geoSampleAccession=GSM1006914; labExpId=RHH004; bioRep=gen0124N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3NucleusPapClustersRep1V2; type=bed; md5sum=b1ad9c86e6f91c6a7b280b4853f217a3; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3NucleusPapFastqRd1Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000267; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5100; geoSampleAccession=GSM1006914; labExpId=RHH004; bioRep=gen0124N; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=68fb641df5cb5675b0545f4bd8baf36b; size=3.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3NucleusPapFastqRd2Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000267; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5100; geoSampleAccession=GSM1006914; labExpId=RHH004; bioRep=gen0124N; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=3bcdb71547d2174a62aba8f569c22f0a; size=3.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3NucleusPapMinusRawRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000267; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5100; geoSampleAccession=GSM1006914; labExpId=RHH004; bioRep=gen0124N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3NucleusPapMinusRawRep1V2; type=bigWig; md5sum=28e104c08161695dcb540cf2821b7b21; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHelas3NucleusPapPlusRawRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000267; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5100; geoSampleAccession=GSM1006914; labExpId=RHH004; bioRep=gen0124N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHelas3NucleusPapPlusRawRep1V2; type=bigWig; md5sum=a8685ba0fd00b821ac72d9223480286f; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000252; dateSubmitted=2009-11-13; dateResubmitted=2010-08-19; dateUnrestricted=2010-08-13; subId=2116; labExpId=DHH002; bioRep=gen0126C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2CytosolPapAlnRep1; type=bam; md5sum=146dbcdbe6179d456f76221cd093d930; size=90M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000252; dateSubmitted=2009-11-13; dateResubmitted=2010-08-19; dateUnrestricted=2010-08-13; subId=2116; labExpId=DHH002; bioRep=gen0126C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2CytosolPapAlnRep1; type=bai; md5sum=0f16146aa141287a7386292944b2b90e; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2CytosolPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000252; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=2116; geoSampleAccession=GSM830525; labExpId=DHH002; bioRep=gen0126C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2CytosolPapClustersRep1; type=bed; md5sum=5340bd7fd0e817d1f4bc97d54a9cc616; size=1.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000252; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830525; labExpId=DHH002; bioRep=gen0126C; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=d030fe790b3bd228dba12c20120502fe; size=457M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000252; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830525; labExpId=DHH002; bioRep=gen0126C; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=15b48b7e515203a8da15d6574e530302; size=618M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2CytosolPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000252; dateSubmitted=2009-11-13; dateResubmitted=2010-08-19; dateUnrestricted=2010-08-13; subId=2116; geoSampleAccession=GSM830525; labExpId=DHH002; bioRep=gen0126C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2CytosolPapMinusRawSigRep1; type=bigWig; md5sum=e9cd55e87fe16b7348624e9fb468ef1b; size=32M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2CytosolPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000252; dateSubmitted=2009-11-13; dateResubmitted=2010-08-19; dateUnrestricted=2010-08-13; subId=2116; geoSampleAccession=GSM830525; labExpId=DHH002; bioRep=gen0126C; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2CytosolPapPlusRawSigRep1; type=bigWig; md5sum=261ba4fcad5e6f496f3652566b83d40a; size=33M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000253; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=2117; labExpId=DHH003; bioRep=gen0129N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2NucleusPapAlnRep1; type=bam; md5sum=3bfb08e51cf80893eb71231fc43a2435; size=114M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000253; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=2117; labExpId=DHH003; bioRep=gen0129N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2NucleusPapAlnRep1; type=bai; md5sum=c478c8f319931356dab50b728685c894; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2NucleusPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000253; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=2117; geoSampleAccession=GSM830531; labExpId=DHH003; bioRep=gen0129N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2NucleusPapClustersRep1; type=bed; md5sum=6d1013d3708a627e7bfea530cc956a20; size=2.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000253; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830531; labExpId=DHH003; bioRep=gen0129N; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=611c84aac912a872ebd7b5e96b56a411; size=587M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000253; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830531; labExpId=DHH003; bioRep=gen0129N; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=b460f513d02ba179e300a7707c304f05; size=806M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2NucleusPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000253; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=2117; geoSampleAccession=GSM830531; labExpId=DHH003; bioRep=gen0129N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2NucleusPapMinusRawSigRep1; type=bigWig; md5sum=5283f7444669a0a5486d9b4ff8fa9cbe; size=52M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHepg2NucleusPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000253; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=2117; geoSampleAccession=GSM830531; labExpId=DHH003; bioRep=gen0129N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHepg2NucleusPapPlusRawSigRep1; type=bigWig; md5sum=ba8cc989c9c1679802b403f62ed6da5b; size=52M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecCytosolPapAlnRep1V2.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000266; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5099; labExpId=RHH003; bioRep=gen0117C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHuvecCytosolPapAlnRep1V2; type=bam; md5sum=fd58f1ee216b20544b3cd41be7ee0ea0; size=4.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecCytosolPapAlnRep1V2.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000266; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5099; labExpId=RHH003; bioRep=gen0117C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHuvecCytosolPapAlnRep1V2; type=bai; md5sum=1293e71a5f2717bf71d5015d53fe18f0; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecCytosolPapClustersRep1V2.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000266; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5099; geoSampleAccession=GSM1006915; labExpId=RHH003; bioRep=gen0117C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHuvecCytosolPapClustersRep1V2; type=bed; md5sum=80c305101f2009d07355d970e29b7a68; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecCytosolPapFastqRd1Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000266; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5099; geoSampleAccession=GSM1006915; labExpId=RHH003; bioRep=gen0117C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=85087703eccb962bc6a6219987045ad8; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecCytosolPapFastqRd2Rep1V2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000266; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5099; geoSampleAccession=GSM1006915; labExpId=RHH003; bioRep=gen0117C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=e36bbb621397a521ad8dd50e0f91212e; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecCytosolPapMinusRawRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000266; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5099; geoSampleAccession=GSM1006915; labExpId=RHH003; bioRep=gen0117C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHuvecCytosolPapMinusRawRep1V2; type=bigWig; md5sum=3be99e4023512e5bd2b2f9c945fab649; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecCytosolPapPlusRawRep1V2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; submittedDataVersion=V2 - Improved Sequencing; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000266; dateSubmitted=2011-11-09; dateResubmitted=2011-05-05; dateUnrestricted=2012-08-09; subId=5099; geoSampleAccession=GSM1006915; labExpId=RHH003; bioRep=gen0117C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetHuvecCytosolPapPlusRawRep1V2; type=bigWig; md5sum=ad2d11ba5ee585cedf4a2910ca030ba9; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecNucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000251; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4031; labExpId=RHH001; bioRep=gen0118N; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHuvecNucleusPapAlnRep1; type=bam; md5sum=db5c295500bdc9750e756850b05e7ec2; size=3.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecNucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000251; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4031; labExpId=RHH001; bioRep=gen0118N; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHuvecNucleusPapAlnRep1; type=bai; md5sum=84a851f8a35395c9891e7d7c096f951e; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecNucleusPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000251; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4031; geoSampleAccession=GSM830519; labExpId=RHH001; bioRep=gen0118N; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHuvecNucleusPapClustersRep1; type=bed; md5sum=61b8749ad28fc63fcf004a03fd981f9a; size=2.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecNucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000251; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4031; geoSampleAccession=GSM830519; labExpId=RHH001; bioRep=gen0118N; labVersion=clone-free; seqPlatform=Illumina_GA2; type=fastq; md5sum=911bf003341fcf8141f5f26747db7dbe; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecNucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000251; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4031; geoSampleAccession=GSM830519; labExpId=RHH001; bioRep=gen0118N; labVersion=clone-free; seqPlatform=Illumina_GA2; type=fastq; md5sum=90aeea4d36c645ac2d14291b18b72914; size=2.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecNucleusPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000251; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4031; geoSampleAccession=GSM830519; labExpId=RHH001; bioRep=gen0118N; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHuvecNucleusPapMinusRawRep1; type=bigWig; md5sum=16bfd4fd3be0fa6e84b28c03f9e41513; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetHuvecNucleusPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000251; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4031; geoSampleAccession=GSM830519; labExpId=RHH001; bioRep=gen0118N; labVersion=clone-free; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetHuvecNucleusPapPlusRawRep1; type=bigWig; md5sum=7bf4b0198aa4b4b4a8f75bb4b4868f5e; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-22; dateUnrestricted=2012-12-22; subId=6191; labExpId=RHI001; bioRep=045WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapAlnRep1; type=bam; md5sum=6ec7adae8231c730e9483d2d652d415e; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-22; dateUnrestricted=2012-12-22; subId=6191; labExpId=RHI001; bioRep=045WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapAlnRep1; type=bai; md5sum=3c98959a863b06a0379a11571e912664; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6394; labExpId=RHI002; bioRep=046WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapAlnRep2; type=bam; md5sum=438f5818fc0625dda374348487483c6b; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6394; labExpId=RHI002; bioRep=046WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapAlnRep2; type=bai; md5sum=c13768256e2f75c234b46d4129f7e57c; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7276; geoSampleAccession=GSM1006908; labExpId=RHI001,RHI002; bioRep=045WC,046WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapClusters; type=bedCluster; md5sum=ca9c092382b3055faccf13452c226eb9; size=2.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-22; dateUnrestricted=2012-12-22; subId=6191; geoSampleAccession=GSM1006908; labExpId=RHI001; bioRep=045WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=25a14832cc5879304047435c6fdc24e1; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6394; geoSampleAccession=GSM1006908; labExpId=RHI002; bioRep=046WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cdcfbd1b9b69321d5c0aa5afa9d176c4; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-22; dateUnrestricted=2012-12-22; subId=6191; geoSampleAccession=GSM1006908; labExpId=RHI001; bioRep=045WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b54da859be8703ed12b7c88d018aa02c; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6394; geoSampleAccession=GSM1006908; labExpId=RHI002; bioRep=046WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=eb21f85a37a56f2e3f52292e76cdef9a; size=2.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-22; dateUnrestricted=2012-12-22; subId=6191; geoSampleAccession=GSM1006908; labExpId=RHI001; bioRep=045WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapMinusRawRep1; type=bigWig; md5sum=dc7958ee2d4650829639706cd1f0cbf7; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6394; geoSampleAccession=GSM1006908; labExpId=RHI002; bioRep=046WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapMinusRawRep2; type=bigWig; md5sum=f14710c35a251e3a2c8da8c3477f6d94; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-22; dateUnrestricted=2012-12-22; subId=6191; geoSampleAccession=GSM1006908; labExpId=RHI001; bioRep=045WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapPlusRawRep1; type=bigWig; md5sum=debae4fde60d2eff9b89f2ded03c7819; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002924; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6394; geoSampleAccession=GSM1006908; labExpId=RHI002; bioRep=046WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CellPapPlusRawRep2; type=bigWig; md5sum=db21b257c5251ca835c00fe74f2cdb87; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6395; labExpId=RHI003; bioRep=045C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapAlnRep1; type=bam; md5sum=096039af97496deba283185219d3aab2; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6395; labExpId=RHI003; bioRep=045C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapAlnRep1; type=bai; md5sum=3ac0c72ab414d6266806f92bdca490d2; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6396; labExpId=RHI004; bioRep=046C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapAlnRep2; type=bam; md5sum=6b656282c05cdb8d0b0cb8b34f638a16; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6396; labExpId=RHI004; bioRep=046C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapAlnRep2; type=bai; md5sum=f99e73a16ffc3052b5c673a31226592f; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7187; geoSampleAccession=GSM1006911; labExpId=RHI003,RHI004; bioRep=045C,046C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapClusters; type=bedCluster; md5sum=ddc562fb1312dac43ce66b9b89b0c128; size=3.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6395; geoSampleAccession=GSM1006911; labExpId=RHI003; bioRep=045C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=73ae7d716f3e2a5f5d4b3735b585abc5; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6396; geoSampleAccession=GSM1006911; labExpId=RHI004; bioRep=046C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=671aa4e1301ab1fa7be9d98c8aa2c695; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6395; geoSampleAccession=GSM1006911; labExpId=RHI003; bioRep=045C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c18bacd62a8e40981a0fde32aa3f01bf; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6396; geoSampleAccession=GSM1006911; labExpId=RHI004; bioRep=046C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=6cbe900c67d989c639b759d17a2dd613; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6395; geoSampleAccession=GSM1006911; labExpId=RHI003; bioRep=045C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapMinusRawRep1; type=bigWig; md5sum=559118b91b757919ee0c39e3764da1ea; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6396; geoSampleAccession=GSM1006911; labExpId=RHI004; bioRep=046C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapMinusRawRep2; type=bigWig; md5sum=caabf1bce1ba1b24bac6ee7e1ab3a1b5; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6395; geoSampleAccession=GSM1006911; labExpId=RHI003; bioRep=045C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapPlusRawRep1; type=bigWig; md5sum=a0c754ee0a44deaa9b15304c3290ecb8; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90CytosolPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002930; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6396; geoSampleAccession=GSM1006911; labExpId=RHI004; bioRep=046C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90CytosolPapPlusRawRep2; type=bigWig; md5sum=d6ba0a51e726b63bab92f379e6924f1b; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6397; labExpId=RHI005; bioRep=045N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapAlnRep1; type=bam; md5sum=9b688928c1b9b9a524c46ab696f3e5f2; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6397; labExpId=RHI005; bioRep=045N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapAlnRep1; type=bai; md5sum=8680e23f8b1186f70be5c5c8c183962e; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6537; labExpId=RHI006; bioRep=046N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapAlnRep2; type=bam; md5sum=ea30ac65f46bf45ddfd78188ac710a85; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6537; labExpId=RHI006; bioRep=046N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapAlnRep2; type=bai; md5sum=9812ba448137f9d7c2c6a9bc93ccefb2; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; donorId=58607680; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7269; geoSampleAccession=GSM1006913; labExpId=RHI005,RHI006; bioRep=045N,046N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapClusters; type=bedCluster; md5sum=62119430e017036d6ede9b55fcb70f3a; size=3.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6397; geoSampleAccession=GSM1006913; labExpId=RHI005; bioRep=045N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cc8258801a21ee5fbfcc7363f7dc0aed; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapFastqRd1Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6537; geoSampleAccession=GSM1006913; labExpId=RHI006; bioRep=046N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=9b114dab268079c57676edadeba13f1d; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6397; geoSampleAccession=GSM1006913; labExpId=RHI005; bioRep=045N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=818d133a7cb0eeb18138cfa980d46220; size=2.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapFastqRd2Rep2.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6537; geoSampleAccession=GSM1006913; labExpId=RHI006; bioRep=046N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ba037139508f7bb9df97751477ab3d85; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6397; geoSampleAccession=GSM1006913; labExpId=RHI005; bioRep=045N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapMinusRawRep1; type=bigWig; md5sum=188ce7e0f0717d8c1f17b3269d25780a; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6537; geoSampleAccession=GSM1006913; labExpId=RHI006; bioRep=046N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapMinusRawRep2; type=bigWig; md5sum=a936e9dacca2d7565b03404d2a3a0efe; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6397; geoSampleAccession=GSM1006913; labExpId=RHI005; bioRep=045N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapPlusRawRep1; type=bigWig; md5sum=e24450de00e320f5e46aeb8e2c10c676; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetImr90NucleusPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002931; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6537; geoSampleAccession=GSM1006913; labExpId=RHI006; bioRep=046N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetImr90NucleusPapPlusRawRep2; type=bigWig; md5sum=a603b124c13c0784294e8bf7f64e1198; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562ChromatinTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000254; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1986; labExpId=PHK001; bioRep=gen0135CH; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562ChromatinTotalAlnRep1; type=bam; md5sum=013c2f36f196e1880e8312951a305dea; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562ChromatinTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000254; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1986; labExpId=PHK001; bioRep=gen0135CH; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562ChromatinTotalAlnRep1; type=bai; md5sum=80dc3b869d568a459e56ee03f795099d; size=3.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562ChromatinTotalClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=K562; localization=chromatin; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000254; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1986; geoSampleAccession=GSM830536; labExpId=PHK001; bioRep=gen0135CH; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562ChromatinTotalClustersRep1; type=bed; md5sum=16ffaaa53f93a84e8c3015d2eb1de073; size=786K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562ChromatinTotalFastqRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=RawData; cell=K562; localization=chromatin; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000254; dateSubmitted=2009-11-13; dateResubmitted=2010-04-07; dateUnrestricted=2010-08-13; subId=841; geoSampleAccession=GSM830536; labExpId=PHK001; bioRep=gen0135CH; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=cee07690167916813020639b9b0c7cec; size=227M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562ChromatinTotalMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000254; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1986; geoSampleAccession=GSM830536; labExpId=PHK001; bioRep=gen0135CH; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562ChromatinTotalMinusRawSigRep1; type=bigWig; md5sum=73c07e72819bac301b9c8005438323da; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562ChromatinTotalPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=K562; localization=chromatin; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000254; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1986; geoSampleAccession=GSM830536; labExpId=PHK001; bioRep=gen0135CH; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562ChromatinTotalPlusRawSigRep1; type=bigWig; md5sum=0a7a3ba1eab8f0bd077aa68f1571b53a; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000255; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4616; labExpId=IHK009010015; bioRep=gen0138C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetK562CytosolPapAlnRep1; type=bam; md5sum=09b28fa2071192f62aac17db362ca53d; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000255; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4616; labExpId=IHK009010015; bioRep=gen0138C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetK562CytosolPapAlnRep1; type=bai; md5sum=b687ae1427e2c46926a46b6cdf208918; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562CytosolPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000255; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4616; geoSampleAccession=GSM830537; labExpId=IHK009010015; bioRep=gen0138C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetK562CytosolPapClustersRep1; type=bed; md5sum=9b9fd57b832df82baad1afd3c847765f; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562CytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000255; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4616; geoSampleAccession=GSM830537; labExpId=IHK009010015; bioRep=gen0138C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=8ef48f1596c5cadcdbefaa7a67218413; size=2.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562CytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000255; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4616; geoSampleAccession=GSM830537; labExpId=IHK009010015; bioRep=gen0138C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=507d7b722ee096954356cb00e25a06c6; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562CytosolPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000255; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4616; geoSampleAccession=GSM830537; labExpId=IHK009010015; bioRep=gen0138C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetK562CytosolPapMinusRawRep1; type=bigWig; md5sum=c20ced2d1bf34f979f22c41f062d6c52; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562CytosolPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000255; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4616; geoSampleAccession=GSM830537; labExpId=IHK009010015; bioRep=gen0138C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetK562CytosolPapPlusRawRep1; type=bigWig; md5sum=ee4bd8baaf3c4437e7472fdda293befc; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleolusTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000256; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1988; labExpId=DHK008; bioRep=gen0145NL; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleolusTotalAlnRep1; type=bam; md5sum=53a48c58e9f6c70f02b0b79553b7ead1; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleolusTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000256; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1988; labExpId=DHK008; bioRep=gen0145NL; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleolusTotalAlnRep1; type=bai; md5sum=58cd68a61b8121f054a5d979c5eb8f88; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleolusTotalClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000256; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1988; geoSampleAccession=GSM830521; labExpId=DHK008; bioRep=gen0145NL; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleolusTotalClustersRep1; type=bed; md5sum=76fd054dbb1842f9c58fa0d3631f53d8; size=696K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleolusTotalFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000256; dateSubmitted=2009-11-13; dateResubmitted=2010-04-07; dateUnrestricted=2010-08-13; subId=841; geoSampleAccession=GSM830521; labExpId=DHK008; bioRep=gen0145NL; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=09a7d6a2c09127c185a426201229d8dc; size=161M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleolusTotalFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000256; dateSubmitted=2009-11-13; dateResubmitted=2010-04-07; dateUnrestricted=2010-08-13; subId=841; geoSampleAccession=GSM830521; labExpId=DHK008; bioRep=gen0145NL; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=1080104d5622e38d8884f4c97c98b9f4; size=196M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleolusTotalMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000256; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1988; geoSampleAccession=GSM830521; labExpId=DHK008; bioRep=gen0145NL; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleolusTotalMinusRawSigRep1; type=bigWig; md5sum=9188f2fc82976cecba4d98c7c99973ea; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleolusTotalPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=K562; localization=nucleolus; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000256; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1988; geoSampleAccession=GSM830521; labExpId=DHK008; bioRep=gen0145NL; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleolusTotalPlusRawSigRep1; type=bigWig; md5sum=a1587b6c346639e0f9aff9923e47b3e7; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleoplasmTotalAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000257; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1987; labExpId=PHK002; bioRep=gen0148NP; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleoplasmTotalAlnRep1; type=bam; md5sum=c2b8e2fa042e8f0617b2fefc2cbff066; size=456K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleoplasmTotalAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000257; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1987; labExpId=PHK002; bioRep=gen0148NP; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleoplasmTotalAlnRep1; type=bai; md5sum=e43dcab6755ebb781df4eb92f7f0d7fa; size=524K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleoplasmTotalClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000257; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1987; geoSampleAccession=GSM830524; labExpId=PHK002; bioRep=gen0148NP; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleoplasmTotalClustersRep1; type=bed; md5sum=643381be4177a6bc13a2052defa3b3ae; size=24K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleoplasmTotalFastqRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=RawData; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000257; dateSubmitted=2009-11-13; dateResubmitted=2010-04-07; dateUnrestricted=2010-08-13; subId=841; geoSampleAccession=GSM830524; labExpId=PHK002; bioRep=gen0148NP; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=f9f78b4c36a26c0663f74f264fc98034; size=72M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleoplasmTotalMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000257; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1987; geoSampleAccession=GSM830524; labExpId=PHK002; bioRep=gen0148NP; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleoplasmTotalMinusRawSigRep1; type=bigWig; md5sum=c98b98e09faa6d2ea62ba00f39b06047; size=662K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleoplasmTotalPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000257; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1987; geoSampleAccession=GSM830524; labExpId=PHK002; bioRep=gen0148NP; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleoplasmTotalPlusRawSigRep1; type=bigWig; md5sum=43bc9d2619ca5a974c252c766107e40a; size=670K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000258; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1984; labExpId=DHK006; bioRep=gen0150N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleusPapAlnRep1; type=bam; md5sum=ee0137cced04dc5b30a2f07c7b9c5fb5; size=93M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000258; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1984; labExpId=DHK006; bioRep=gen0150N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleusPapAlnRep1; type=bai; md5sum=2a17aec7564927022171ad7ac1f06865; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleusPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000258; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1984; geoSampleAccession=GSM830526; labExpId=DHK006; bioRep=gen0150N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleusPapClustersRep1; type=bed; md5sum=398974455a7b7a22faa37baef00b89e7; size=1.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000258; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830526; labExpId=DHK006; bioRep=gen0150N; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=70a243e36a1a02ba1aa3e796f2e5c059; size=581M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000258; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830526; labExpId=DHK006; bioRep=gen0150N; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=8c3460c1bbff5e8bb08bcacd67978e05; size=602M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleusPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000258; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1984; geoSampleAccession=GSM830526; labExpId=DHK006; bioRep=gen0150N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleusPapMinusRawSigRep1; type=bigWig; md5sum=0eb3c08edbe2f45db1a6b0b8762ea3f0; size=43M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562NucleusPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000258; dateSubmitted=2009-11-13; dateResubmitted=2010-08-18; dateUnrestricted=2010-08-13; subId=1984; geoSampleAccession=GSM830526; labExpId=DHK006; bioRep=gen0150N; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562NucleusPapPlusRawSigRep1; type=bigWig; md5sum=c727a7b67c7b0b8f28d8f511ebb3b89e; size=43M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562PolysomePapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=polysome; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000259; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1985; labExpId=DHK007; bioRep=gen0153P; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562PolysomePapAlnRep1; type=bam; md5sum=13f582655eea95d8f4ec5083fd181f99; size=354M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562PolysomePapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=K562; localization=polysome; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000259; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1985; labExpId=DHK007; bioRep=gen0153P; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562PolysomePapAlnRep1; type=bai; md5sum=046390ffe04c64fffb7106e625f7725d; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562PolysomePapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=K562; localization=polysome; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000259; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1985; geoSampleAccession=GSM830527; labExpId=DHK007; bioRep=gen0153P; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562PolysomePapClustersRep1; type=bed; md5sum=ca9b0f37cf1e3eab147d690374ba6991; size=2.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562PolysomePapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=K562; localization=polysome; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000259; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830527; labExpId=DHK007; bioRep=gen0153P; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=11e2b327e72491d169218b2446cabbe8; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562PolysomePapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=K562; localization=polysome; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000259; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830527; labExpId=DHK007; bioRep=gen0153P; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=8ba34c4d5b57f981b499e73e9b252a2a; size=2.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562PolysomePapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=K562; localization=polysome; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000259; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1985; geoSampleAccession=GSM830527; labExpId=DHK007; bioRep=gen0153P; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562PolysomePapMinusRawSigRep1; type=bigWig; md5sum=42bb878a4e876a65ec7b8a4b0e5f6265; size=60M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetK562PolysomePapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=K562; localization=polysome; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000259; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1985; geoSampleAccession=GSM830527; labExpId=DHK007; bioRep=gen0153P; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetK562PolysomePapPlusRawSigRep1; type=bigWig; md5sum=676ed61bb1072774127e023944d63dbc; size=60M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6403; labExpId=RHM046; bioRep=089WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapAlnRep3; type=bam; md5sum=8b5e9689e83a1cfdefe99ca74670eec7; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6403; labExpId=RHM046; bioRep=089WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapAlnRep3; type=bai; md5sum=1af0036ed9aff87b124926ba0270ac3c; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6402; labExpId=RHM047; bioRep=090WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapAlnRep4; type=bam; md5sum=43ba39a1ad89c733b4db24a99f86e6d7; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6402; labExpId=RHM047; bioRep=090WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapAlnRep4; type=bai; md5sum=6d88775f3c3baaf73d5c85436a5d7fd2; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7267; geoSampleAccession=GSM1006905; labExpId=RHM046,RHM047; bioRep=089WC,090WC; labVersion=iIDR; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapClusters; type=bedCluster; md5sum=9429a9022c64788a8ccb48fe0d5e8124; size=3.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6403; geoSampleAccession=GSM1006905; labExpId=RHM046; bioRep=089WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=741ea38a005ddb164ae1d2ede35853a9; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6402; geoSampleAccession=GSM1006905; labExpId=RHM047; bioRep=090WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=89c3166f2974ab3dc7ecf64b3bf45e60; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6403; geoSampleAccession=GSM1006905; labExpId=RHM046; bioRep=089WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=973e5e20a1bb0c3efd1d47ca97cf89e9; size=2.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6402; geoSampleAccession=GSM1006905; labExpId=RHM047; bioRep=090WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0b320665c59fa414d6bf305f737cd64e; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6403; geoSampleAccession=GSM1006905; labExpId=RHM046; bioRep=089WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapMinusRawRep3; type=bigWig; md5sum=d47c57713fe0a6eb59c891efe25b4747; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6402; geoSampleAccession=GSM1006905; labExpId=RHM047; bioRep=090WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapMinusRawRep4; type=bigWig; md5sum=707ee6124af96edd2ddded4618a0fbe8; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6403; geoSampleAccession=GSM1006905; labExpId=RHM046; bioRep=089WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapPlusRawRep3; type=bigWig; md5sum=b8a21b1aeb7ec64675f7f9a43348765b; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CellPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002934; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6402; geoSampleAccession=GSM1006905; labExpId=RHM047; bioRep=090WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CellPapPlusRawRep4; type=bigWig; md5sum=3372d1241d34f69a80b2c759835253f3; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6401; labExpId=RHM044; bioRep=089C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapAlnRep3; type=bam; md5sum=ddffbcb748bcb4ccd45f678d904c4e69; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6401; labExpId=RHM044; bioRep=089C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapAlnRep3; type=bai; md5sum=e6e92e482e6787322d8c9301ece8c010; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6407; labExpId=RHM045; bioRep=090C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapAlnRep4; type=bam; md5sum=4fb4372cdfaa15ed807b110fa58bafc8; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6407; labExpId=RHM045; bioRep=090C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapAlnRep4; type=bai; md5sum=5c153bdbdcfbbe44f5c607499ea355b4; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7273; geoSampleAccession=GSM1006904; labExpId=RHM044,RHM045; bioRep=089C,090C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapClusters; type=bedCluster; md5sum=157f067028bf9b6f47e5cdfa40be5f95; size=2.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6401; geoSampleAccession=GSM1006904; labExpId=RHM044; bioRep=089C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2d2d1ce2fa2f10c1e2c6236f2d516c0d; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6407; geoSampleAccession=GSM1006904; labExpId=RHM045; bioRep=090C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=846eb856626b8df9ce22a9e792040a30; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6401; geoSampleAccession=GSM1006904; labExpId=RHM044; bioRep=089C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ad3d80d4213ac3967a1a4da1c74ffaa1; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6407; geoSampleAccession=GSM1006904; labExpId=RHM045; bioRep=090C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1d87bac52bb37e929438e8ad52032b57; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6401; geoSampleAccession=GSM1006904; labExpId=RHM044; bioRep=089C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapMinusRawRep3; type=bigWig; md5sum=cde79b57f953ae7617f3087280489498; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6407; geoSampleAccession=GSM1006904; labExpId=RHM045; bioRep=090C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapMinusRawRep4; type=bigWig; md5sum=cd60d5a1e9466b8d280734cb60d79c5f; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6401; geoSampleAccession=GSM1006904; labExpId=RHM044; bioRep=089C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapPlusRawRep3; type=bigWig; md5sum=bbd85b5f6078d66e7c6c879d50019eaa; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7CytosolPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002932; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6407; geoSampleAccession=GSM1006904; labExpId=RHM045; bioRep=090C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7CytosolPapPlusRawRep4; type=bigWig; md5sum=c616cab896b3fd3a8a7d30a5186a4b9a; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6406; labExpId=RHM054; bioRep=089N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapAlnRep3; type=bam; md5sum=cba510d76113b610b882d5a83bdf1bb1; size=3.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6406; labExpId=RHM054; bioRep=089N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapAlnRep3; type=bai; md5sum=984a7e9cbde44afa8d3dc3aeaa752ebd; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6410; labExpId=RHM055; bioRep=090N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapAlnRep4; type=bam; md5sum=6a773ae9b3cc196d9dd8f484ab6423f1; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6410; labExpId=RHM055; bioRep=090N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapAlnRep4; type=bai; md5sum=689a12d24c2c8a113b87dd9d6cc5409d; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7272; geoSampleAccession=GSM1006912; labExpId=RHM054,RHM055; bioRep=089N,090N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapClusters; type=bedCluster; md5sum=7339e29c127c1a17405a6589642f3609; size=72K; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6406; geoSampleAccession=GSM1006912; labExpId=RHM054; bioRep=089N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=bcb40b24f500ab611370e63bd71f9154; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6410; geoSampleAccession=GSM1006912; labExpId=RHM055; bioRep=090N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=92d572430fc74bd97d67f8a3f9693c78; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6406; geoSampleAccession=GSM1006912; labExpId=RHM054; bioRep=089N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=70521fe20dd1d97c53b5adcb615b4cc1; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6410; geoSampleAccession=GSM1006912; labExpId=RHM055; bioRep=090N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=14c71b084f756fafe871c0a27795e1fb; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6406; geoSampleAccession=GSM1006912; labExpId=RHM054; bioRep=089N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapMinusRawRep3; type=bigWig; md5sum=e65fb041c024dc00b862152051088dc4; size=1.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6410; geoSampleAccession=GSM1006912; labExpId=RHM055; bioRep=090N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapMinusRawRep4; type=bigWig; md5sum=d1f9121730e28ff9ae9902e77aaa24db; size=1.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6406; geoSampleAccession=GSM1006912; labExpId=RHM054; bioRep=089N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapPlusRawRep3; type=bigWig; md5sum=fe7f1d386ccba5e63ab97c58b7152702; size=1.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetMcf7NucleusPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002933; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6410; geoSampleAccession=GSM1006912; labExpId=RHM055; bioRep=090N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetMcf7NucleusPapPlusRawRep4; type=bigWig; md5sum=5d0a60eec0e517bfe5acc20aa637931b; size=1.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekCytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000260; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4026; labExpId=IHN011; bioRep=gen0156C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekCytosolPapAlnRep1; type=bam; md5sum=dcc5d59fa996a2346312e017553b7189; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekCytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000260; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4026; labExpId=IHN011; bioRep=gen0156C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekCytosolPapAlnRep1; type=bai; md5sum=3f84d25224ec72111e41d73c9c2b8395; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekCytosolPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000260; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4026; geoSampleAccession=GSM830522; labExpId=IHN011; bioRep=gen0156C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekCytosolPapClustersRep1; type=bed; md5sum=937dd4a0a0c71f512bbb64ce4c3af912; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekCytosolPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000260; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4026; geoSampleAccession=GSM830522; labExpId=IHN011; bioRep=gen0156C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=1dfd651571f3e562651269b20d317a2d; size=882M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekCytosolPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000260; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4026; geoSampleAccession=GSM830522; labExpId=IHN011; bioRep=gen0156C; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=63ad89abb193d2afc5ce52cfd7d6f00b; size=868M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekCytosolPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000260; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4026; geoSampleAccession=GSM830522; labExpId=IHN011; bioRep=gen0156C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekCytosolPapMinusRawRep1; type=bigWig; md5sum=b4550476a11e2b248a29f2c70e5a4317; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekCytosolPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000260; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4026; geoSampleAccession=GSM830522; labExpId=IHN011; bioRep=gen0156C; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekCytosolPapPlusRawRep1; type=bigWig; md5sum=0cef6eeda63434f2f8ab4df39319ad6c; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekNucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000261; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4028; labExpId=IHN012; bioRep=gen0158N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekNucleusPapAlnRep1; type=bam; md5sum=c75f3771c79a4573a13183f45b9a116f; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekNucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000261; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4028; labExpId=IHN012; bioRep=gen0158N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekNucleusPapAlnRep1; type=bai; md5sum=ac569a421e2f61ecf675364298b760bf; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekNucleusPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000261; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4028; geoSampleAccession=GSM830523; labExpId=IHN012; bioRep=gen0158N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekNucleusPapClustersRep1; type=bed; md5sum=5d6f7fafd4c46def32f966f51ab92ee5; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekNucleusPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000261; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4028; geoSampleAccession=GSM830523; labExpId=IHN012; bioRep=gen0158N; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=335aa957d884afa7957abf29bcc58e62; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekNucleusPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000261; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4028; geoSampleAccession=GSM830523; labExpId=IHN012; bioRep=gen0158N; labVersion=clone-free; seqPlatform=Illumina_GA2x; type=fastq; md5sum=0574f548bfca92c6400452cf71dffb0c; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekNucleusPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000261; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4028; geoSampleAccession=GSM830523; labExpId=IHN012; bioRep=gen0158N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekNucleusPapMinusRawRep1; type=bigWig; md5sum=5de798a6aac7da424adf49247abe7fc8; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetNhekNucleusPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000261; dateSubmitted=2009-11-13; dateResubmitted=2011-05-05; dateUnrestricted=2010-08-13; subId=4028; geoSampleAccession=GSM830523; labExpId=IHN012; bioRep=gen0158N; labVersion=clone-free; seqPlatform=Illumina_GA2x; tableName=wgEncodeGisRnaPetNhekNucleusPapPlusRawRep1; type=bigWig; md5sum=9ddd1d0717f21d92942c843ed4530af1; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetProstateCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=prostate; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000262; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1989; labExpId=DHP001; bioRep=gen0160WC; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetProstateCellPapAlnRep1; type=bam; md5sum=2b35614e74d2a5a1127d984740fc210e; size=34M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetProstateCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=prostate; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000262; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1989; labExpId=DHP001; bioRep=gen0160WC; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetProstateCellPapAlnRep1; type=bai; md5sum=3c079c3be9664c75627f4b0e79c4ed80; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetProstateCellPapClustersRep1.bed.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=prostate; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000262; dateSubmitted=2009-11-13; dateResubmitted=2010-03-08; dateUnrestricted=2010-08-13; subId=1989; geoSampleAccession=GSM830520; labExpId=DHP001; bioRep=gen0160WC; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetProstateCellPapClustersRep1; type=bed; md5sum=03f9cd2ff4caa0dfc6406e53e6660487; size=1001K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetProstateCellPapFastqRd1Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=prostate; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000262; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830520; labExpId=DHP001; bioRep=gen0160WC; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=bccec7defc834d01fcc1c491d2b38ef0; size=109M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetProstateCellPapFastqRd2Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=prostate; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2010 Freeze; dccAccession=wgEncodeEH000262; dateSubmitted=2009-11-13; dateResubmitted=2009-11-17; dateUnrestricted=2010-08-13; subId=778; geoSampleAccession=GSM830520; labExpId=DHP001; bioRep=gen0160WC; labVersion=clone-based; seqPlatform=Illumina_GA2; type=fastq; md5sum=8b04f434b5b80d74948578f2182b1e2e; size=125M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetProstateCellPapMinusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=prostate; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000262; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1989; geoSampleAccession=GSM830520; labExpId=DHP001; bioRep=gen0160WC; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetProstateCellPapMinusRawSigRep1; type=bigWig; md5sum=e9d6ba8c32c3d56ef6d23ffbf8143b8c; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetProstateCellPapPlusRawSigRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=prostate; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000262; dateSubmitted=2009-11-13; dateResubmitted=2010-07-22; dateUnrestricted=2010-08-13; subId=1989; geoSampleAccession=GSM830520; labExpId=DHP001; bioRep=gen0160WC; labVersion=clone-based; seqPlatform=Illumina_GA2; tableName=wgEncodeGisRnaPetProstateCellPapPlusRawSigRep1; type=bigWig; md5sum=5c16509331a37e16c739fcf86fbf7652; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6234; labExpId=RHS015; bioRep=085WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapAlnRep3; type=bam; md5sum=3abe63a1fb584354ec9b3fe0d4816418; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6234; labExpId=RHS015; bioRep=085WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapAlnRep3; type=bai; md5sum=bf6ae18f1bc1b7a4dba20fd64cdeab3d; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6236; labExpId=RHS016; bioRep=086WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapAlnRep4; type=bam; md5sum=c637bf532ae67265474f21f810effc84; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6236; labExpId=RHS016; bioRep=086WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapAlnRep4; type=bai; md5sum=2f9d4f859ad4895c990f4ef5c33d1aa0; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7270; geoSampleAccession=GSM1006910; labExpId=RHS015,RHS016; bioRep=085WC,086WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapClusters; type=bedCluster; md5sum=e83f2760b330f08d0907be1d11cc769e; size=3.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6234; geoSampleAccession=GSM1006910; labExpId=RHS015; bioRep=085WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=10a04f8aaac77dd0c95c5f99154f26a2; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6236; geoSampleAccession=GSM1006910; labExpId=RHS016; bioRep=086WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5b63acc9d3114b5adac33a49e64c73da; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6234; geoSampleAccession=GSM1006910; labExpId=RHS015; bioRep=085WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=018df0bf60d5e64763cb95457052e0cf; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6236; geoSampleAccession=GSM1006910; labExpId=RHS016; bioRep=086WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=af6057a960aaa679a7d6fdbbd06e68da; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6234; geoSampleAccession=GSM1006910; labExpId=RHS015; bioRep=085WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapMinusRawRep3; type=bigWig; md5sum=ceba74b3bc5d6be1f31ebbeebee6f582; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6236; geoSampleAccession=GSM1006910; labExpId=RHS016; bioRep=086WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapMinusRawRep4; type=bigWig; md5sum=cacc867f656b84bd48f72f9d35e55e06; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6234; geoSampleAccession=GSM1006910; labExpId=RHS015; bioRep=085WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapPlusRawRep3; type=bigWig; md5sum=cc4ee85c657d319f9415ddef7a3f6f2d; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCellPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002926; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6236; geoSampleAccession=GSM1006910; labExpId=RHS016; bioRep=086WC; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCellPapPlusRawRep4; type=bigWig; md5sum=11dc9961e8ef2eda1d806ae3fb7a003a; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6233; labExpId=RHS017; bioRep=085C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapAlnRep3; type=bam; md5sum=3c4d5b02df0a4850c1c5ac5c5d01c2ff; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6233; labExpId=RHS017; bioRep=085C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapAlnRep3; type=bai; md5sum=77f6df953ec8e698ca470f21237c2190; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6235; labExpId=RHS018; bioRep=086C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapAlnRep4; type=bam; md5sum=52e859ee9a4b85f6fdf6b0c8ed4b4f97; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6235; labExpId=RHS018; bioRep=086C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapAlnRep4; type=bai; md5sum=5006111f9b0d4c6b7b4042368ba38d1c; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7268; geoSampleAccession=GSM1006907; labExpId=RHS017,RHS018; bioRep=085C,086C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapClusters; type=bedCluster; md5sum=2e4a119208b6ac9dcf01d99f9aab944c; size=3.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6233; geoSampleAccession=GSM1006907; labExpId=RHS017; bioRep=085C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d349a414b6463655257997e472833808; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6235; geoSampleAccession=GSM1006907; labExpId=RHS018; bioRep=086C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=bb70ff63a5b2626f9bfb2123311ab350; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6233; geoSampleAccession=GSM1006907; labExpId=RHS017; bioRep=085C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cbaf46d2e28eaef63b076cd184b6321b; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6235; geoSampleAccession=GSM1006907; labExpId=RHS018; bioRep=086C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=8ffd49094e03aa343d0e48b060159750; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6233; geoSampleAccession=GSM1006907; labExpId=RHS017; bioRep=085C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapMinusRawRep3; type=bigWig; md5sum=445087e435232f2feef85a922af137a7; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6235; geoSampleAccession=GSM1006907; labExpId=RHS018; bioRep=086C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapMinusRawRep4; type=bigWig; md5sum=e330d3fe393d4db2ca5c66325d4ed0a9; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6233; geoSampleAccession=GSM1006907; labExpId=RHS017; bioRep=085C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapPlusRawRep3; type=bigWig; md5sum=816b437e91b912a31b6e1cd5fd8c70dc; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshCytosolPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002925; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; subId=6235; geoSampleAccession=GSM1006907; labExpId=RHS018; bioRep=086C; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshCytosolPapPlusRawRep4; type=bigWig; md5sum=70411a1c7c75a0318cbe11c0270900ee; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6413; labExpId=RHS019; bioRep=085N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapAlnRep3; type=bam; md5sum=93b947b661ecfd029225651b45be81db; size=3.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6413; labExpId=RHS019; bioRep=085N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapAlnRep3; type=bai; md5sum=b74fdac20250028ef26afb6e4bea23f1; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6411; labExpId=RHS020; bioRep=086N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapAlnRep4; type=bam; md5sum=c52fe1b870e579da294e039a72ba3a21; size=3.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6411; labExpId=RHS020; bioRep=086N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapAlnRep4; type=bai; md5sum=24efc785bc877cb56dd55cc613a00f01; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapClusters.bedCluster.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=Clusters; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateResubmitted=2012-06-29; dateUnrestricted=2012-12-27; subId=7275; geoSampleAccession=GSM1006906; labExpId=RHS019,RHS020; bioRep=085N,086N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapClusters; type=bedCluster; md5sum=cdcaa6fc46640cd38a459e2558e1d74c; size=2.6M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapFastqRd1Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6413; geoSampleAccession=GSM1006906; labExpId=RHS019; bioRep=085N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=822858501aaf49faa18900ba2befe6e3; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapFastqRd1Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd1; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6411; geoSampleAccession=GSM1006906; labExpId=RHS020; bioRep=086N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ca3f35e8f553081d794a7e8f5fba044c; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapFastqRd2Rep3.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6413; geoSampleAccession=GSM1006906; labExpId=RHS019; bioRep=085N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=7525f58b8cfbfc649775fe56ed62a0d0; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapFastqRd2Rep4.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=FastqRd2; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6411; geoSampleAccession=GSM1006906; labExpId=RHS020; bioRep=086N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=54dfecaaeb1c31cde353afd48e4b1b80; size=2.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6413; geoSampleAccession=GSM1006906; labExpId=RHS019; bioRep=085N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapMinusRawRep3; type=bigWig; md5sum=2579fb9bd0f5a07fc430001bc0a765fe; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=MinusRawSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6411; geoSampleAccession=GSM1006906; labExpId=RHS020; bioRep=086N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapMinusRawRep4; type=bigWig; md5sum=7473e4548a38bc2ae1fac86241cf9ba7; size=9.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6413; geoSampleAccession=GSM1006906; labExpId=RHS019; bioRep=085N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapPlusRawRep3; type=bigWig; md5sum=738f5c5b04374f2132330ad11e72b7ac; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaPet/releaseLatest/wgEncodeGisRnaPetSknshNucleusPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaPet; dataType=RnaPet; view=PlusRawSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=2x36; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002935; dateSubmitted=2012-03-27; dateUnrestricted=2012-12-27; subId=6411; geoSampleAccession=GSM1006906; labExpId=RHS020; bioRep=086N; labVersion=clone-free; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeGisRnaPetSknshNucleusPapPlusRawRep4; type=bigWig; md5sum=e0120f6ed47a3b699908a0119723a6d3; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/ucsc_encode_dcc_wgEncodeGisRnaSeq.soft type=soft; size=9.3K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqGm12878CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000269; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1399; geoSampleAccession=GSM672834; labExpId=crg-9; bioRep=gen0106C; labProtocolId=gen0106C+; tableName=wgEncodeGisRnaSeqGm12878CytosolPapAlnRep1; type=bam; md5sum=cbe74aad388e38dfb2ca4da93f6a9fee; size=640M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqGm12878CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000269; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1399; geoSampleAccession=GSM672834; labExpId=crg-9; bioRep=gen0106C; labProtocolId=gen0106C+; tableName=wgEncodeGisRnaSeqGm12878CytosolPapAlnRep1; type=bai; md5sum=47e1118bdfe446d7951914f6e6e91db0; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqGm12878CytosolPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000269; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1399; geoSampleAccession=GSM672834; labExpId=crg-9; bioRep=gen0106C; labProtocolId=gen0106C+; tableName=wgEncodeGisRnaSeqGm12878CytosolPapMinusRawRep1; type=bigWig; md5sum=f2f6cad8fd4086144d22685c99af6ec6; size=69M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqGm12878CytosolPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000269; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1399; geoSampleAccession=GSM672834; labExpId=crg-9; bioRep=gen0106C; labProtocolId=gen0106C+; tableName=wgEncodeGisRnaSeqGm12878CytosolPapPlusRawRep1; type=bigWig; md5sum=63eb77a143f6b3eb3d2b143eacd39b3c; size=76M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqGm12878CytosolPapRawData2Rep1.csqual.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000269; dateSubmitted=2009-10-29; dateResubmitted=2010-09-17; dateUnrestricted=2010-07-29; subId=2323; geoSampleAccession=GSM672834; labExpId=crg-9; bioRep=gen0106C; labProtocolId=gen0106C+; type=csqual; md5sum=76cc978f317edb1b9082a8d19f053081; size=861M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqGm12878CytosolPapRawDataRep1.csfasta.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000269; dateSubmitted=2009-10-29; dateResubmitted=2010-09-17; dateUnrestricted=2010-07-29; subId=2323; geoSampleAccession=GSM672834; labExpId=crg-9; bioRep=gen0106C; labProtocolId=gen0106C+; type=csfasta; md5sum=034eb5d9f7e4fa3c3c6163c26340ea09; size=690M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqH1hescCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000270; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1400; geoSampleAccession=GSM672836; labExpId=crg-16; bioRep=gen0115WC; labProtocolId=gen0115WC+; tableName=wgEncodeGisRnaSeqH1hescCellPapAlnRep1; type=bam; md5sum=7081f6c40227464a083a267cfae0793c; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqH1hescCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000270; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1400; geoSampleAccession=GSM672836; labExpId=crg-16; bioRep=gen0115WC; labProtocolId=gen0115WC+; tableName=wgEncodeGisRnaSeqH1hescCellPapAlnRep1; type=bai; md5sum=442bfbe42b283c7aabcdca3b434eeb7c; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqH1hescCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000270; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1400; geoSampleAccession=GSM672836; labExpId=crg-16; bioRep=gen0115WC; labProtocolId=gen0115WC+; tableName=wgEncodeGisRnaSeqH1hescCellPapMinusRawRep1; type=bigWig; md5sum=272f91d52f8be7b9a059d998012a561f; size=255M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqH1hescCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000270; dateSubmitted=2009-10-29; dateResubmitted=2010-07-03; dateUnrestricted=2010-07-29; subId=1400; geoSampleAccession=GSM672836; labExpId=crg-16; bioRep=gen0115WC; labProtocolId=gen0115WC+; tableName=wgEncodeGisRnaSeqH1hescCellPapPlusRawRep1; type=bigWig; md5sum=d218ad22fac6126fcda6669242be4c97; size=270M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqH1hescCellPapRawData3Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000270; dateSubmitted=2009-10-29; dateResubmitted=2010-09-17; dateUnrestricted=2010-07-29; subId=2323; geoSampleAccession=GSM672836; labExpId=crg-16; bioRep=gen0115WC; labProtocolId=gen0115WC+; type=fastq; md5sum=874413c608aaee5afc4f2c337a85bd81; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672833; labExpId=crg-48; bioRep=gen0139C; labProtocolId=gen0139C+; tableName=wgEncodeGisRnaSeqK562CytosolPapAlnRep1; type=bam; md5sum=ee30c5e4e0477cf211d80d6b9234b656; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672833; labExpId=crg-48; bioRep=gen0139C; labProtocolId=gen0139C+; tableName=wgEncodeGisRnaSeqK562CytosolPapAlnRep1; type=bai; md5sum=2eb7e297f20fa5bfc3434f285cef0837; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672835; labExpId=crg-55; bioRep=gen0141C; labProtocolId=gen0141C+; tableName=wgEncodeGisRnaSeqK562CytosolPapAlnRep2; type=bam; md5sum=ab4c8b4cda763aa07c35bb7258b82593; size=829M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672835; labExpId=crg-55; bioRep=gen0141C; labProtocolId=gen0141C+; tableName=wgEncodeGisRnaSeqK562CytosolPapAlnRep2; type=bai; md5sum=6184fd823d60bdc69abeada594989013; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672833; labExpId=crg-48; bioRep=gen0139C; labProtocolId=gen0139C+; tableName=wgEncodeGisRnaSeqK562CytosolPapMinusRawRep1; type=bigWig; md5sum=170514a331d6b9941b6756d0ad01b9fa; size=150M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=MinusRawSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672835; labExpId=crg-55; bioRep=gen0141C; labProtocolId=gen0141C+; tableName=wgEncodeGisRnaSeqK562CytosolPapMinusRawRep2; type=bigWig; md5sum=9ae05b262ed17d43e56fda06cc1334ef; size=77M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672833; labExpId=crg-48; bioRep=gen0139C; labProtocolId=gen0139C+; tableName=wgEncodeGisRnaSeqK562CytosolPapPlusRawRep1; type=bigWig; md5sum=0e752e1b3df40d967c5578c6f5530206; size=153M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=PlusRawSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-07-01; dateUnrestricted=2010-07-29; subId=1401; geoSampleAccession=GSM672835; labExpId=crg-55; bioRep=gen0141C; labProtocolId=gen0141C+; tableName=wgEncodeGisRnaSeqK562CytosolPapPlusRawRep2; type=bigWig; md5sum=97df76e6ccec64e13e158a232e70a182; size=85M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapRawData2Rep2.csqual.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-09-17; dateUnrestricted=2010-07-29; subId=2323; geoSampleAccession=GSM672835; labExpId=crg-55; bioRep=gen0141C; labProtocolId=gen0141C+; type=csqual; md5sum=045fd5d3ee6725132feed41e88341405; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapRawData3Rep1.fastq.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-09-17; dateUnrestricted=2010-07-29; subId=2323; geoSampleAccession=GSM672833; labExpId=crg-48; bioRep=gen0139C; labProtocolId=gen0139C+; type=fastq; md5sum=ad87bb1990b0dabb15833377db5274b0; size=2.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeGisRnaSeq/releaseLatest/wgEncodeGisRnaSeqK562CytosolPapRawDataRep2.csfasta.gz project=wgEncode; grant=Gingeras; lab=GIS; composite=wgEncodeGisRnaSeq; dataType=RnaSeq; view=RawData; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000271; dateSubmitted=2009-10-29; dateResubmitted=2010-09-17; dateUnrestricted=2010-07-29; subId=2323; geoSampleAccession=GSM672835; labExpId=crg-55; bioRep=gen0141C; labProtocolId=gen0141C+; type=csfasta; md5sum=cbe31af94a51e64cc5421099a9a32bb2; size=486M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3422; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep1; type=bam; md5sum=4cfc99373e471ba419ec43760eb75d6f; size=416M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3422; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep1; type=bai; md5sum=6a1f2a4043e6ee827db74e49b69212f2; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep2; type=bam; md5sum=19b5a4f9929fe434cb11983a93433584; size=295M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep2; type=bai; md5sum=8382e9f1decfbe90bc25c2b19a8572a6; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3481; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapMinusSignalRep1; type=bigWig; md5sum=cb45e712458ae6c29623d0e1cf7bc5b2; size=65M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3482; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapMinusSignalRep2; type=bigWig; md5sum=cac38e9a81172791a918cdfb5c6775f3; size=53M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3481; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapPlusSignalRep1; type=bigWig; md5sum=189929e27bbae8fbc603a66fd646e238; size=67M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3482; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapPlusSignalRep2; type=bigWig; md5sum=286cb07c282eb64f4204349d61fa3678; size=55M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3422; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=56fb9223f20ea47d8fc9ac986de14d0f; size=522M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=ba92c4b67807582aa6a9572073e69ee3; size=368M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4517; geoSampleAccession=GSM849359; labExpId=K16,K17; bioRep=021WC,022WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=cae06fe184558274964cc7a34164bf89; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=A549; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849359; labExpId=K16,K17; bioRep=021WC,022WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapTssHmm; type=bedRnaElements; md5sum=7b0f3d45b0bc364e95bd918c835fdae5; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6657; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep3; type=bam; md5sum=9d7c580e8eea5c2b193070069f0b9e51; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6657; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep3; type=bai; md5sum=46ed62f1350d8e9b3dd3a85f1f66d174; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6688; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep4; type=bam; md5sum=cd4e783624d01398f8f1ac961770b60f; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6688; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep4; type=bai; md5sum=9554cc029f1fb1aff7ecd492bbc627a1; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6595; geoSampleAccession=GSM979632; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapMinusRawRep3; type=bigWig; md5sum=7a79e9bc5f9edf7308728252d3bf6e11; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6626; geoSampleAccession=GSM979632; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapMinusRawRep4; type=bigWig; md5sum=d5408590ab9ea722a02563e50cae78c3; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6595; geoSampleAccession=GSM979632; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapPlusRawRep3; type=bigWig; md5sum=274bdd7e673e0c29c0981e389c661dcd; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6626; geoSampleAccession=GSM979632; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapPlusRawRep4; type=bigWig; md5sum=e14de5dee4e2a0c8c5ea6688dcaf9a4d; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6434; geoSampleAccession=GSM979632; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=9208e5ee1887657ac8d5a1416f3078a1; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6465; geoSampleAccession=GSM979632; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=64484988cb80ed64177b881392d1651a; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549CytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6723; geoSampleAccession=GSM979632; labExpId=CThi10049,CThi10059; bioRep=087C,088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapTssHmm; type=bedRnaElements; md5sum=3ca940aaac31db4c9cd99b250b381984; size=3.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6670; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep3; type=bam; md5sum=b2de372f2a14170431a7e2cf41c81b67; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6670; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep3; type=bai; md5sum=67fc850ed90dcd91200ca434bc78d335; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6689; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep4; type=bam; md5sum=84172dcb11974dae3de0b18ba2f78c70; size=2.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6689; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep4; type=bai; md5sum=f69bb5158254ab8bfa56d4e17060676e; size=5.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6608; geoSampleAccession=GSM979633; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapMinusRawRep3; type=bigWig; md5sum=bdecc7faa264379e9d6f630a450a81bc; size=39M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6627; geoSampleAccession=GSM979633; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapMinusRawRep4; type=bigWig; md5sum=294fdaa0b30a6765b26962d5b8805480; size=69M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6608; geoSampleAccession=GSM979633; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapPlusRawRep3; type=bigWig; md5sum=3a6e65f30ef737261aca751e9da261cd; size=36M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6627; geoSampleAccession=GSM979633; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapPlusRawRep4; type=bigWig; md5sum=fa33f011425e6b9cb4db74dc538a2862; size=61M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6447; geoSampleAccession=GSM979633; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1edf5fc648f0880d45007083366e5231; size=2.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6466; geoSampleAccession=GSM979633; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f166417d95ae21529d5ecd95eecf618c; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageA549NucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6719; geoSampleAccession=GSM979633; labExpId=CThi10106,CThi10060; bioRep=087N,088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapTssHmm; type=bedRnaElements; md5sum=a2e080e0849f65e0c15bf9553371b674; size=5.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep1; type=bam; md5sum=b4e3933531d3d4ba91680a2d19cbd497; size=530M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep1; type=bai; md5sum=fde66c3c3d6613bfb9f142b84fc6f0af; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep2; type=bam; md5sum=6137d7782b16a37eea79cf2580ffbce5; size=456M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep2; type=bai; md5sum=1b5991705c53711377cfc1aed5da1729; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3479; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapMinusSignalRep1; type=bigWig; md5sum=f0a6517e60934654068bdc9e403abb1e; size=68M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3480; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapMinusSignalRep2; type=bigWig; md5sum=a5a9e730880d6f3d05f9bcbf476ed337; size=62M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3479; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapPlusSignalRep1; type=bigWig; md5sum=3655e816beecbbf279250e30a9691b66; size=70M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3480; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapPlusSignalRep2; type=bigWig; md5sum=3582ebe3e115d576f987a5f5b61e04e4; size=64M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=73716d9b241a824ecc1a80539fe326ae; size=669M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=74ba9d09a4c64ef086ba64317fd149e6; size=563M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4520; geoSampleAccession=GSM849358; labExpId=K12,K13; bioRep=017WC,018WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=cd8c202675587912e01c8ca4c2b24344; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageAg04450CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=AG04450; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849358; labExpId=K12,K13; bioRep=017WC,018WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapTssHmm; type=bedRnaElements; md5sum=ddc41e9f47db9fa7c2862b3ecdde70df; size=2.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep1; type=bam; md5sum=a1132dad095044a9d2db183fdb09e3ff; size=418M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep1; type=bai; md5sum=32292329cf614ce8fae8161ae5e4f385; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep2; type=bam; md5sum=f4f7f44b1ac7044c8e9a886cccd5c391; size=421M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep2; type=bai; md5sum=4967ce59a18a9317d9aca85351ca78ca; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3483; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapMinusSignalRep1; type=bigWig; md5sum=364067cd07ff38b75ad2e65b2d244d31; size=59M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3484; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapMinusSignalRep2; type=bigWig; md5sum=af499c5f6e76233e78ab0c07f9676b51; size=63M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3483; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapPlusSignalRep1; type=bigWig; md5sum=f8a208df77bad82c559a9c79454b27cc; size=61M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3484; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapPlusSignalRep2; type=bigWig; md5sum=e8984fe76c3bf0b9808485aca37169dc; size=65M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=2bdeccb1e52715ccbffc0e2da5f5676d; size=516M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=40c7327ec23ce4d16f20d584fe981b87; size=500M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4498; geoSampleAccession=GSM849328; labExpId=K18,K19; bioRep=037WC,038WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=77f308b9e1745c719328d6a96f030278; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageBjCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=BJ; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849328; labExpId=K18,K19; bioRep=037WC,038WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapTssHmm; type=bedRnaElements; md5sum=5384dc8d939943aceddf0fd66effe38b; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6687; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep1; type=bam; md5sum=387094d340b1e6ef83273828fab72a6a; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6687; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep1; type=bai; md5sum=183b2c520f45473d819574114362531e; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6710; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep2; type=bam; md5sum=b49964c65715c71f32c7329504721599; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6710; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep2; type=bai; md5sum=4f2bf22b8f066c4cf14aca17fc418181; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6625; geoSampleAccession=GSM979634; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapMinusRawRep1; type=bigWig; md5sum=2053bfd291ad4fec1ffaea1a5517828b; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6647; geoSampleAccession=GSM979634; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapMinusRawRep2; type=bigWig; md5sum=0ea0e0130caaa4463c8df320d520d47e; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6625; geoSampleAccession=GSM979634; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapPlusRawRep1; type=bigWig; md5sum=8b23418535fdb54eef063a684eb7380e; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6647; geoSampleAccession=GSM979634; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapPlusRawRep2; type=bigWig; md5sum=290e3fee55b7c60fd32b705c1a012255; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6463; geoSampleAccession=GSM979634; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=390ad3d5d7ef514709e5eaf772cb1fbd; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6487; geoSampleAccession=GSM979634; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=62de2bb1c831e4e12e21d73ce6edeaa0; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd20CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6744; geoSampleAccession=GSM979634; labExpId=CThi10023,CThi10024; bioRep=041WC,042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapTssHmm; type=bedRnaElements; md5sum=c69036e9a1bf0eb39d0b73687fc31ec1; size=2.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd34mobilizedCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6679; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapAlnRep1; type=bam; md5sum=6473babe341854a82cd55454238b553c; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd34mobilizedCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6679; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapAlnRep1; type=bai; md5sum=52cf9687562f4ff6c690286732041c4c; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd34mobilizedCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6618; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapMinusRawRep1; type=bigWig; md5sum=d9ad2b6901d7044ac738e80d537c8cad; size=35M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd34mobilizedCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6618; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapPlusRawRep1; type=bigWig; md5sum=b2ccda5c3c3645069e2cb640a85c4e98; size=33M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd34mobilizedCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6457; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4c2bcef04c267c5a53d08d79cf5fa702; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageCd34mobilizedCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6725; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapTssHmm; type=bedRnaElements; md5sum=ab8da53f0160caed5bf387c3f1f376d0; size=1.9M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep1; type=bam; md5sum=ea9f4c22893c4742e10c7a650eb708b1; size=598M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep1; type=bai; md5sum=2f6dcd025e5cd4cf2f2c27588907ea4d; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep2; type=bam; md5sum=1f7c9c2db92bf0c340342d3b79c2bb56; size=651M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep2; type=bai; md5sum=31c490fd5faccc8052d5c164607be4ab; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapMinusSignalRep1; type=bigWig; md5sum=8cd60821188d81a0fff923b913a2f156; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; geoSampleAccession=GSM849368; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapMinusSignalRep2; type=bigWig; md5sum=4f1cbefb544bc5d8b00ebc089cf9178f; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapPlusSignalRep1; type=bigWig; md5sum=6b3c771491b80a0c2a79d908a5e1f60b; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; geoSampleAccession=GSM849368; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapPlusSignalRep2; type=bigWig; md5sum=2c5e364b2affd07ca95a344f16ce8f26; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapRawDataRep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2389; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=38489b20550f89a117ba9652efd95373; size=731M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapRawDataRep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2394; geoSampleAccession=GSM849368; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=935bf7c7b2a9d9225739aab7ea69a65d; size=792M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4531; geoSampleAccession=GSM849368; labExpId=J72,J73; bioRep=003WC,004WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=42dad26024f54a14d89c8ac0a4a89192; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849368; labExpId=J72,J73; bioRep=003WC,004WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapTssHmm; type=bedRnaElements; md5sum=5f6e685ac94e68d1f8696df5f695fd1a; size=5.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; labExpId=I27; bioRep=gen0104C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolPamAln; type=bam; md5sum=ce61eeed6ffb7b9ea07c9e912a2aa65d; size=571M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; labExpId=I27; bioRep=gen0104C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolPamAln; type=bai; md5sum=057098a2247ac79249d48cc55e6e9ee5; size=5.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolPamMinusSignal; type=bigWig; md5sum=16f881e10265380521e309683375cf3d; size=12M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolPamPlusSignal; type=bigWig; md5sum=5fec08d3900bf7c1c20a9b35689f5663; size=12M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateUnrestricted=2009-12-09; subId=2433; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; type=fastq; md5sum=156618e589854a9454497754f0b0b003; size=562M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4526; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; type=gtf; md5sum=327f9a60e47cefc8ad0ce78122d9f472; size=2.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2011-11-04; dateUnrestricted=2012-08-04; subId=5075; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=IDR; type=bedRnaElements; md5sum=329b5534c170df31bb68a5ec85fa29c7; size=3.1M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; tableName=wgEncodeRikenCageGm12878CytosolPamTssHmmV2; type=bedRnaElements; md5sum=71a1a2c77cc44a6fe8096bcecd7c96e9; size=3.1M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3950; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep1; type=bam; md5sum=8cdec463b84758a0f9413ed98415aa0c; size=594M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3950; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep1; type=bai; md5sum=8d586a3389dd7d10466aa277903a3116; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3947; labExpId=J85; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep2; type=bam; md5sum=e8873a432725fff6acf71991c178b875; size=589M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3947; labExpId=J85; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep2; type=bai; md5sum=3604a10a48d7d54a0b06cd560416a3b6; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3950; geoSampleAccession=GSM849349; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapMinusSignalRep1; type=bigWig; md5sum=33171018a1b5f7ca9469e87db1f2d052; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3947; geoSampleAccession=GSM849349; labExpId=J85; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapMinusSignalRep2; type=bigWig; md5sum=8ef216b78facfa754fd26e7cf34b963d; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3950; geoSampleAccession=GSM849349; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapPlusSignalRep1; type=bigWig; md5sum=591b45fc707da9b9e001622830803330; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3947; geoSampleAccession=GSM849349; labExpId=J85; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapPlusSignalRep2; type=bigWig; md5sum=3de885fbcf494db1ae4266a32d15dfaa; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapRawDataRep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2393; geoSampleAccession=GSM849349; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=71621ab0376d95da763cd0146429528d; size=761M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapRawDataRep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2391; geoSampleAccession=GSM849349; labExpId=J85; bioRep=004C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=60bb1cd2e8e256eb61c79de047251c61; size=755M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4508; geoSampleAccession=GSM849349; labExpId=J84,J85; bioRep=003C,004C; seqPlatform=Illumina_GA2x; type=gtf; md5sum=74c76a88c989f1a7972e96b49c514a40; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878CytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849349; labExpId=J84,J85; bioRep=003C,004C; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapTssHmm; type=bedRnaElements; md5sum=cc58970f6a67f0e89db9c6d3095a5430; size=4.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleolusTotalAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000340; dateSubmitted=2010-01-14; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2125; labExpId=I69; bioRep=gen0109NL; tableName=wgEncodeRikenCageGm12878NucleolusTotalAln; type=bam; md5sum=d4e4b81db44e2902ecb84ac658b3c7c2; size=1.1G; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleolusTotalAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000340; dateSubmitted=2010-01-14; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2125; labExpId=I69; bioRep=gen0109NL; tableName=wgEncodeRikenCageGm12878NucleolusTotalAln; type=bai; md5sum=d263538a905fe8faad8aaa73936c545a; size=5.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleolusTotalMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000340; dateSubmitted=2010-01-14; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2125; geoSampleAccession=GSM849352; labExpId=I69; bioRep=gen0109NL; tableName=wgEncodeRikenCageGm12878NucleolusTotalMinusSignal; type=bigWig; md5sum=90b6c133f36725b2bf30b34aee1cc200; size=18M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleolusTotalPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000340; dateSubmitted=2010-01-14; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2125; geoSampleAccession=GSM849352; labExpId=I69; bioRep=gen0109NL; tableName=wgEncodeRikenCageGm12878NucleolusTotalPlusSignal; type=bigWig; md5sum=500c1be9022e41ab500e533982de78d5; size=19M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleolusTotalRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000340; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849352; labExpId=I69; bioRep=gen0109NL; type=fastq; md5sum=86558766bd604387be73ca72418eddb0; size=1.2G; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleolusTotalTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000340; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4506; geoSampleAccession=GSM849352; labExpId=I69; bioRep=gen0109NL; type=gtf; md5sum=bcfebe0eb93dcc20af0772a0bedfe759; size=2.8M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleolusTotalTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=nucleolus; rnaExtract=total; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000340; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849352; labExpId=I69; bioRep=gen0109NL; tableName=wgEncodeRikenCageGm12878NucleolusTotalTssHmmV2; type=bedRnaElements; md5sum=bca64a670503ff8ea90691646f083043; size=7.3M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPamAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000339; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2350; labExpId=J59; bioRep=gen0110N; tableName=wgEncodeRikenCageGm12878NucleusPamAlnRep1; type=bam; md5sum=eff9f038c0e003bc34a4ea4516569c61; size=50M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPamAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000339; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2350; labExpId=J59; bioRep=gen0110N; tableName=wgEncodeRikenCageGm12878NucleusPamAlnRep1; type=bai; md5sum=bcba902d38cc8707af40ae425eb7d8f1; size=3.4M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPamMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000339; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2350; geoSampleAccession=GSM849341; labExpId=J59; bioRep=gen0110N; tableName=wgEncodeRikenCageGm12878NucleusPamMinusSignalRep1; type=bigWig; md5sum=f88733366681111f6386a981891d2f48; size=1.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPamPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000339; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2350; geoSampleAccession=GSM849341; labExpId=J59; bioRep=gen0110N; tableName=wgEncodeRikenCageGm12878NucleusPamPlusSignalRep1; type=bigWig; md5sum=b567929178ba7d6de1e0680babf3d94c; size=1012K; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPamRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000339; dateSubmitted=2009-03-09; dateUnrestricted=2009-12-09; subId=2350; geoSampleAccession=GSM849341; labExpId=J59; bioRep=gen0110N; type=fastq; md5sum=401b0d36cc6ecbc8b59f3ad73e1bd44f; size=76M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000339; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4509; geoSampleAccession=GSM849341; labExpId=J59; bioRep=gen0110N; type=gtf; md5sum=609ab760c944108b3297c4a1214995f2; size=2.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=nucleus; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000339; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849341; labExpId=J59; bioRep=gen0110N; tableName=wgEncodeRikenCageGm12878NucleusPamTssHmmV2; type=bedRnaElements; md5sum=a81778e4ff3a240be04062054910091b; size=727K; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3948; labExpId=J93; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapAlnRep1; type=bam; md5sum=f1ebe561e26b754b40b344e312162fc2; size=603M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3948; labExpId=J93; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapAlnRep1; type=bai; md5sum=32329f56d20a34c34cc1203357771205; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3949; labExpId=J94; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapAlnRep2; type=bam; md5sum=f53ab0b4254874cabaf77484b20a2e4d; size=643M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3949; labExpId=J94; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapAlnRep2; type=bai; md5sum=8191307115d4461a5b8c3018afb73da3; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3948; geoSampleAccession=GSM849348; labExpId=J93; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapMinusSignalRep1; type=bigWig; md5sum=cd846b0203ddf3ac6dfee13acb9bf030; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3949; geoSampleAccession=GSM849348; labExpId=J94; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapMinusSignalRep2; type=bigWig; md5sum=0bce07d725d364eb5010391f105d48cb; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3948; geoSampleAccession=GSM849348; labExpId=J93; bioRep=003N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapPlusSignalRep1; type=bigWig; md5sum=63ec12b6dbeeabfa18346d71b448b5ef; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3949; geoSampleAccession=GSM849348; labExpId=J94; bioRep=004N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapPlusSignalRep2; type=bigWig; md5sum=682f11c1765159727acadf7d102fa937; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapRawDataRep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2390; geoSampleAccession=GSM849348; labExpId=J93; bioRep=003N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=febdbaf841a04cc6b8a985f99000de90; size=749M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapRawDataRep2.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2392; geoSampleAccession=GSM849348; labExpId=J94; bioRep=004N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=d3ea3876b0f4b2a02aab89bec7e9d710; size=760M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4536; geoSampleAccession=GSM849348; labExpId=J93,J94; bioRep=003N,004N; seqPlatform=Illumina_GA2x; type=gtf; md5sum=f540fa9eeba85d12124693b116f1b581; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageGm12878NucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001678; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849348; labExpId=J93,J94; bioRep=003N,004N; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878NucleusPapTssHmm; type=bedRnaElements; md5sum=ac1075ac9fcb104a35a8159e7e9a8158; size=6.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateResubmitted=2010-09-22; dateUnrestricted=2010-10-13; subId=1799; labExpId=I67; bioRep=gen0113WC; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageH1hescCellPamAln; type=bam; md5sum=9cd926fb78e6a109c6f83f67bba264f3; size=728M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateResubmitted=2010-09-22; dateUnrestricted=2010-10-13; subId=1799; labExpId=I67; bioRep=gen0113WC; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageH1hescCellPamAln; type=bai; md5sum=cdec53868897ea4a8ed857030d454dac; size=5.2M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateResubmitted=2010-09-22; dateUnrestricted=2010-10-13; subId=1799; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageH1hescCellPamMinusSignal; type=bigWig; md5sum=94db6594e3652cd5d769fbcb24e7ec27; size=6.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateResubmitted=2010-09-22; dateUnrestricted=2010-10-13; subId=1799; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageH1hescCellPamPlusSignal; type=bigWig; md5sum=7ec869e6e5dc08e4ff210d8f10a53ee6; size=9.2M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; type=fastq; md5sum=d4bf93d6c819c491b124cda8dc8593ce; size=933M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4530; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; type=gtf; md5sum=814faa1bdd7e766ce10fab6e40da90fc; size=2.8M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; tableName=wgEncodeRikenCageH1hescCellPamTssHmmV2; type=bedRnaElements; md5sum=881c01c967f0041c0b64f9ec4228dccd; size=4.4M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2380; labExpId=J74; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapAlnRep1; type=bam; md5sum=8967b37d49e4aeb1a827c2bba18ff2dd; size=665M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2380; labExpId=J74; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapAlnRep1; type=bai; md5sum=fe49657a52bfebb614b38fd2ae8f56cb; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2370; labExpId=J75; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapAlnRep2; type=bam; md5sum=b2d2b1db4c8ea702619e5d43bf8b9faa; size=639M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2370; labExpId=J75; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapAlnRep2; type=bai; md5sum=168340e060fb954d738c35189b38839d; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2380; geoSampleAccession=GSM849357; labExpId=J74; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapMinusSignalRep1; type=bigWig; md5sum=af71f718325dffa717412c03a20b3a24; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2370; geoSampleAccession=GSM849357; labExpId=J75; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapMinusSignalRep2; type=bigWig; md5sum=65ec690e4f56dcbbf777be0515a99579; size=6.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2380; geoSampleAccession=GSM849357; labExpId=J74; bioRep=005WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapPlusSignalRep1; type=bigWig; md5sum=407e55ddec4a0cb0d4140c5419b06311; size=6.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2370; geoSampleAccession=GSM849357; labExpId=J75; bioRep=006WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapPlusSignalRep2; type=bigWig; md5sum=a7e9cfc789181f09584692acfea929bb; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2380; geoSampleAccession=GSM849357; labExpId=J74; bioRep=005WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=a7186ad215baddb0067b790b3188d8a4; size=805M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2370; geoSampleAccession=GSM849357; labExpId=J75; bioRep=006WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=10ff2ab8cd1740567213ec8e14ff95ce; size=765M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4505; geoSampleAccession=GSM849357; labExpId=J74,J75; bioRep=005WC,006WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=a5ad9ad642ab1252e2aa890aab89328d; size=3.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=H1-hESC; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001138; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849357; labExpId=J74,J75; bioRep=005WC,006WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCellPapTssHmm; type=bedRnaElements; md5sum=a4cdc93d8803820602fc68d664ff2882; size=4.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001139; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2379; labExpId=J86; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCytosolPapAlnRep2; type=bam; md5sum=517fe6f8794493006e2756b5f1e1c2e7; size=628M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001139; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2379; labExpId=J86; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCytosolPapAlnRep2; type=bai; md5sum=8b05e80f60869129a4b2947d4a80bc02; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCytosolPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001139; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2379; geoSampleAccession=GSM849356; labExpId=J86; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCytosolPapMinusSignalRep2; type=bigWig; md5sum=45702da159378b723c5fe749c9a600b8; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCytosolPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001139; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2379; geoSampleAccession=GSM849356; labExpId=J86; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCytosolPapPlusSignalRep2; type=bigWig; md5sum=bacc17901f779ee8551afd858bc7bac7; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCytosolPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001139; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2379; geoSampleAccession=GSM849356; labExpId=J86; bioRep=006C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=a1f11acd7a2c04941a8e83f4c31e5c13; size=787M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescCytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=H1-hESC; localization=cytosol; rnaExtract=longPolyA; readType=1x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001139; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; subId=7562; geoSampleAccession=GSM849356; labExpId=J86; bioRep=006C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescCytosolPapTssHmm; type=bedRnaElements; md5sum=0d96ca71dbc0c868e13ed2b58b3e5679; size=1.1M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescNucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001140; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2360; labExpId=J95; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescNucleusPapAlnRep2; type=bam; md5sum=13a82092ce42218948697041ae6942b9; size=671M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescNucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001140; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2360; labExpId=J95; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescNucleusPapAlnRep2; type=bai; md5sum=50104f02b4b7932e1daed24377dcde3d; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescNucleusPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001140; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2360; geoSampleAccession=GSM849326; labExpId=J95; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescNucleusPapMinusSignalRep2; type=bigWig; md5sum=3da9ef1cdb0957a337294e60f7edb79d; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescNucleusPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001140; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2360; geoSampleAccession=GSM849326; labExpId=J95; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescNucleusPapPlusSignalRep2; type=bigWig; md5sum=2a1be0ad1384fa93a1ef60cf3e24adad; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescNucleusPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001140; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2360; geoSampleAccession=GSM849326; labExpId=J95; bioRep=006N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=233452cd0e0d6de26c902b65bcabaa54; size=775M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageH1hescNucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=H1-hESC; localization=nucleus; rnaExtract=longPolyA; readType=1x36; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH001140; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; subId=7561; geoSampleAccession=GSM849326; labExpId=J95; bioRep=006N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageH1hescNucleusPapTssHmm; type=bedRnaElements; md5sum=9db72cc11424489b7a5f1dbbdfe3b22c; size=1.5M; replicate=2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6668; labExpId=CThi10100CTT; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapAlnRep1; type=bam; md5sum=14cac2e94363cd4186e767507c947ced; size=737M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6668; labExpId=CThi10100CTT; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapAlnRep1; type=bai; md5sum=40976046b6207905c0b3679bca68e51c; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6693; labExpId=CThi10103CTT; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapAlnRep2; type=bam; md5sum=1fe0441116c966bc0a4f5d676530ab0c; size=448M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6693; labExpId=CThi10103CTT; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapAlnRep2; type=bai; md5sum=a25753f23eae8c326be6b8ef4cce81bd; size=3.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6607; geoSampleAccession=GSM979637; labExpId=CThi10100CTT; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapMinusRawRep1; type=bigWig; md5sum=d1e5d63201342ee6cb3d16b6d10ed4a6; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6630; geoSampleAccession=GSM979637; labExpId=CThi10103CTT; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapMinusRawRep2; type=bigWig; md5sum=af214afeee4a9b5762c0441a9fe0f693; size=7.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6607; geoSampleAccession=GSM979637; labExpId=CThi10100CTT; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapPlusRawRep1; type=bigWig; md5sum=31e4428286940cd660bc91e0a246b65c; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6630; geoSampleAccession=GSM979637; labExpId=CThi10103CTT; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapPlusRawRep2; type=bigWig; md5sum=bafab25b12beb99256c91f574954349c; size=7.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6445; geoSampleAccession=GSM979637; labExpId=CThi10100CTT; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5e007cdfad2b5126ec904d7ce337f7dd; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6471; geoSampleAccession=GSM979637; labExpId=CThi10103CTT; bioRep=056WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=6cce4e2914ba9a473ff32fad303b5f9c; size=782M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoafCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=6111301.9,6090101.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6735; geoSampleAccession=GSM979637; labExpId=CThi10100CTT,CThi10103CTT; bioRep=055WC,056WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapTssHmm; type=bedRnaElements; md5sum=1b8ba54c57dff258eac509de7724e475; size=1.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6662; labExpId=CThi10103GAT; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapAlnRep1; type=bam; md5sum=5fb2f0484b691849bddc2a000bd5d44d; size=669M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6662; labExpId=CThi10103GAT; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapAlnRep1; type=bai; md5sum=98a899503c089e072992e1a6c4a0f3db; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6676; labExpId=CThi10105CTT; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapAlnRep2; type=bam; md5sum=d450c5549102af6710b8a7e0a9d5ba16; size=311M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6676; labExpId=CThi10105CTT; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapAlnRep2; type=bai; md5sum=471726698dc95a656899bbda943ff419; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6600; geoSampleAccession=GSM979636; labExpId=CThi10103GAT; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapMinusRawRep1; type=bigWig; md5sum=0c604bfa9c734c45bde7062c416ab2b0; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6614; geoSampleAccession=GSM979636; labExpId=CThi10105CTT; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapMinusRawRep2; type=bigWig; md5sum=5aecbc16a96c7a33805f62aa2addfe7b; size=7.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6600; geoSampleAccession=GSM979636; labExpId=CThi10103GAT; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapPlusRawRep1; type=bigWig; md5sum=0bde8e3bde46c8ce50e5cc7e2e0c6d28; size=9.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6614; geoSampleAccession=GSM979636; labExpId=CThi10105CTT; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapPlusRawRep2; type=bigWig; md5sum=ee69c59c382028951cf330bd70f42178; size=8.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071706.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6439; geoSampleAccession=GSM979636; labExpId=CThi10103GAT; bioRep=057WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=95fa9e4be06560401c1bfc44042b1adf; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6454; geoSampleAccession=GSM979636; labExpId=CThi10105CTT; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=526d791f2880746b0e1f63dd522d1370; size=541M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHaoecCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=7071706.1,8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6733; geoSampleAccession=GSM979636; labExpId=CThi10103GAT,CThi10105CTT; bioRep=057WC,058WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoecCellPapTssHmm; type=bedRnaElements; md5sum=b1d39d8b853b44e65f08702e998919a1; size=1.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6707; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapAlnRep1; type=bam; md5sum=dbb1648b53999f625db05b909894452a; size=107M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6707; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapAlnRep1; type=bai; md5sum=c818925f26354d2fbe51294ddfcbae64; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6709; labExpId=CThi10104ACA; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapAlnRep2; type=bam; md5sum=73e5b9c803359f325ce115c9152aa18e; size=612M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6709; labExpId=CThi10104ACA; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapAlnRep2; type=bai; md5sum=f4d712f8aecb8f4fa5b8434853a94722; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6645; geoSampleAccession=GSM979639; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapMinusRawRep1; type=bigWig; md5sum=d163e9d412b3229303633cd34d360e45; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6648; geoSampleAccession=GSM979639; labExpId=CThi10104ACA; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapMinusRawRep2; type=bigWig; md5sum=fe289bca4cb7a0c9501527e7567be770; size=9.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6645; geoSampleAccession=GSM979639; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapPlusRawRep1; type=bigWig; md5sum=91b5da2e5ae77dab71fe7b7db39e3df2; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6648; geoSampleAccession=GSM979639; labExpId=CThi10104ACA; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapPlusRawRep2; type=bigWig; md5sum=cb664f7fe3a37b9706789240f6e8e712; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6484; geoSampleAccession=GSM979639; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=302c83b584b4f3b3d5bbb8a8dd4cb0d8; size=220M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6486; geoSampleAccession=GSM979639; labExpId=CThi10104ACA; bioRep=060WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1fdcdfd8c47ef898a933a274b2305606; size=1019M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHchCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0011308.2P,8100808.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6736; geoSampleAccession=GSM979639; labExpId=CThi10104CTT,CThi10104ACA; bioRep=059WC,060WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapTssHmm; type=bedRnaElements; md5sum=f41c9e3635733556e5eebfe5b78cf7b9; size=982K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2363; labExpId=J80; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapAlnRep1; type=bam; md5sum=45d63896684904984986a8eee2b0801e; size=634M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2363; labExpId=J80; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapAlnRep1; type=bai; md5sum=951458bec43e7be84349f351d4061ee1; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2374; labExpId=J81; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapAlnRep2; type=bam; md5sum=e856fe6b026f841fa8c7cfa3809fc9c8; size=613M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2374; labExpId=J81; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapAlnRep2; type=bai; md5sum=3e77310275c3f3610cfed4bc616b2cb7; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2363; geoSampleAccession=GSM849342; labExpId=J80; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapMinusSignalRep1; type=bigWig; md5sum=fb530996757594dd8bec8f8c6cc5e777; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2374; geoSampleAccession=GSM849342; labExpId=J81; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapMinusSignalRep2; type=bigWig; md5sum=1d44544b712c79cb24e087be43f43d82; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2363; geoSampleAccession=GSM849342; labExpId=J80; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapPlusSignalRep1; type=bigWig; md5sum=fdd5a24977678434f95070287a48f89a; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2374; geoSampleAccession=GSM849342; labExpId=J81; bioRep=012WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapPlusSignalRep2; type=bigWig; md5sum=f05df8e18f2f5ad1a406e3349fa3c722; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2363; geoSampleAccession=GSM849342; labExpId=J80; bioRep=011WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=48aff060ec90197fa98e74584a48c63f; size=814M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2374; geoSampleAccession=GSM849342; labExpId=J81; bioRep=012WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=3cdaeaa2170fb7dc3d9ce96b3d7cea49; size=807M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4504; geoSampleAccession=GSM849342; labExpId=J80,J81; bioRep=011WC,012WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=4935697034d9b624b10dfc2244421c03; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849342; labExpId=J80,J81; bioRep=011WC,012WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapTssHmm; type=bedRnaElements; md5sum=3c9fa398b95e4deab207ceba9c866726; size=4.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2784; labExpId=J56; bioRep=gen0121C; tableName=wgEncodeRikenCageHelas3CytosolPamAln; type=bam; md5sum=def431706c70f3d46525988474ed8f89; size=216M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2784; labExpId=J56; bioRep=gen0121C; tableName=wgEncodeRikenCageHelas3CytosolPamAln; type=bai; md5sum=edb78dd5e763ce19a68cbe3c47336a31; size=4.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2784; geoSampleAccession=GSM849360; labExpId=J56; bioRep=gen0121C; tableName=wgEncodeRikenCageHelas3CytosolPamMinusSignal; type=bigWig; md5sum=f65ac5a8ff72138a0be9c5ec35237a18; size=1.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2784; geoSampleAccession=GSM849360; labExpId=J56; bioRep=gen0121C; tableName=wgEncodeRikenCageHelas3CytosolPamPlusSignal; type=bigWig; md5sum=adeaec4bbf04650b98a3b562d3714081; size=1.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2784; geoSampleAccession=GSM849360; labExpId=J56; bioRep=gen0121C; type=fastq; md5sum=01bebeda593fbde96d2eb7157099fd59; size=824M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4535; geoSampleAccession=GSM849360; labExpId=J56; bioRep=gen0121C; type=gtf; md5sum=3696114d14200626baeea4f2e54c757c; size=2.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2011-11-04; dateUnrestricted=2012-08-04; subId=5085; geoSampleAccession=GSM849360; labExpId=J56; bioRep=gen0121C; labVersion=IDR; type=bedRnaElements; md5sum=5f12a5131874544169d78864a0c7a75c; size=941K; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HeLa-S3; localization=cytosol; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001155; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849360; labExpId=J56; bioRep=gen0121C; tableName=wgEncodeRikenCageHelas3CytosolPamTssHmmV2; type=bedRnaElements; md5sum=a14bb23d9df2699d7f279074bd1032d0; size=944K; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2364; labExpId=J87; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapAlnRep1; type=bam; md5sum=af7972342466cd98b2059e0c24830aca; size=543M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2364; labExpId=J87; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapAlnRep1; type=bai; md5sum=7215279de9e84437a46aee3349138b25; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2355; labExpId=J88; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapAlnRep2; type=bam; md5sum=52059340eaedef246a80e3f7cc3e66cd; size=582M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2355; labExpId=J88; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapAlnRep2; type=bai; md5sum=1587f48462fc945db485dd20c9177d4b; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2364; geoSampleAccession=GSM849330; labExpId=J87; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapMinusSignalRep1; type=bigWig; md5sum=963897966f19b8d1089a8d0d074f9522; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2355; geoSampleAccession=GSM849330; labExpId=J88; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapMinusSignalRep2; type=bigWig; md5sum=9aaf4bb31fd997e3593b3e27458727b5; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2364; geoSampleAccession=GSM849330; labExpId=J87; bioRep=011C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapPlusSignalRep1; type=bigWig; md5sum=9eb664071fa7d9dd0f2db954508deeb6; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2355; geoSampleAccession=GSM849330; labExpId=J88; bioRep=012C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapPlusSignalRep2; type=bigWig; md5sum=f08210a600e1121ee30ccdf5c8c3f194; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2364; geoSampleAccession=GSM849330; labExpId=J87; bioRep=011C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=1430caf04df24a9f56178363869beb1f; size=674M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2355; geoSampleAccession=GSM849330; labExpId=J88; bioRep=012C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=ae3619b785120420ccdd78e6362b4147; size=750M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4527; geoSampleAccession=GSM849330; labExpId=J87,J88; bioRep=011C,012C; seqPlatform=Illumina_GA2x; type=gtf; md5sum=daa6f533411f7bde84295ba8681aa0a1; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3CytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HeLa-S3; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001144; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849330; labExpId=J87,J88; bioRep=011C,012C; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CytosolPapTssHmm; type=bedRnaElements; md5sum=c5254de3ecaa95be2021c22647c93923; size=3.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleolusTotalAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001156; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2783; labExpId=J58; bioRep=gen0123NL; tableName=wgEncodeRikenCageHelas3NucleolusTotalAln; type=bam; md5sum=e5fdab898b87acb8a98bc67ec2727dce; size=227M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleolusTotalAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001156; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2783; labExpId=J58; bioRep=gen0123NL; tableName=wgEncodeRikenCageHelas3NucleolusTotalAln; type=bai; md5sum=40d5d15a29d71b8c63617e068b6b8b44; size=3.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleolusTotalMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001156; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2783; geoSampleAccession=GSM849363; labExpId=J58; bioRep=gen0123NL; tableName=wgEncodeRikenCageHelas3NucleolusTotalMinusSignal; type=bigWig; md5sum=f349b38f1156fd7c9af1e502a488ce72; size=1.3M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleolusTotalPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001156; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2783; geoSampleAccession=GSM849363; labExpId=J58; bioRep=gen0123NL; tableName=wgEncodeRikenCageHelas3NucleolusTotalPlusSignal; type=bigWig; md5sum=7fc3c66d83b13f92308e99d96452ccf3; size=1.3M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleolusTotalRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001156; dateSubmitted=2010-10-29; dateUnrestricted=2011-07-29; subId=2783; geoSampleAccession=GSM849363; labExpId=J58; bioRep=gen0123NL; type=fastq; md5sum=e14ab9bb9e49263376054a517b60d9fb; size=1.1G; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleolusTotalTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HeLa-S3; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001156; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4534; geoSampleAccession=GSM849363; labExpId=J58; bioRep=gen0123NL; type=gtf; md5sum=fa0907bef59c2e6d2859a78c8cd7debf; size=2.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleolusTotalTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HeLa-S3; localization=nucleolus; rnaExtract=total; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001156; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849363; labExpId=J58; bioRep=gen0123NL; tableName=wgEncodeRikenCageHelas3NucleolusTotalTssHmmV2; type=bedRnaElements; md5sum=a0e3afe4f0962495f26c98c8cdad4cda; size=891K; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPamAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002775; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6666; labExpId=CTig10028; bioRep=gen0163N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPamAlnRep1; type=bam; md5sum=12cf4273d216a86313df412a65018dd2; size=559M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPamAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002775; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6666; labExpId=CTig10028; bioRep=gen0163N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPamAlnRep1; type=bai; md5sum=609d95f951f6dd3b3debea5b983b21b5; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPamMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002775; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6605; geoSampleAccession=GSM979631; labExpId=CTig10028; bioRep=gen0163N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPamMinusRawRep1; type=bigWig; md5sum=a2736d3a53110909cfb64cb8c5a09b53; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPamPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002775; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6605; geoSampleAccession=GSM979631; labExpId=CTig10028; bioRep=gen0163N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPamPlusRawRep1; type=bigWig; md5sum=8128cae05f011c9427cb083b939322fe; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPamRawDataRep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002775; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6444; geoSampleAccession=GSM979631; labExpId=CTig10028; bioRep=gen0163N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=e0b744cf7eddfb3fa3dcb74157a27f34; size=958M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPamTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HeLa-S3; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002775; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6718; geoSampleAccession=GSM979631; labExpId=CTig10028; bioRep=gen0163N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPamTssHmm; type=bedRnaElements; md5sum=546d06d9cbd57d8afeb22e394fce1122; size=1.3M; replicate=163; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2386; labExpId=J96; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapAlnRep1; type=bam; md5sum=64ca6d02c8eefe813cc02030a07b83f7; size=474M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2386; labExpId=J96; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapAlnRep1; type=bai; md5sum=a4b924787eebf0237b317ec0af2f2923; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2384; labExpId=J97; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapAlnRep2; type=bam; md5sum=3df468fc8f7c745a44d8d9856a6c6974; size=545M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2384; labExpId=J97; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapAlnRep2; type=bai; md5sum=9cbbf3bf493ba598fe0cdd31dc35d041; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2386; geoSampleAccession=GSM849331; labExpId=J96; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapMinusSignalRep1; type=bigWig; md5sum=e5ee4571965b12cabb39c5a22e984f5d; size=9.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2384; geoSampleAccession=GSM849331; labExpId=J97; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapMinusSignalRep2; type=bigWig; md5sum=fa076d5af435705fdbd2b3a6272417ba; size=9.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2386; geoSampleAccession=GSM849331; labExpId=J96; bioRep=011N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapPlusSignalRep1; type=bigWig; md5sum=c628400c758e62742bbb79c992d8bde6; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2384; geoSampleAccession=GSM849331; labExpId=J97; bioRep=012N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapPlusSignalRep2; type=bigWig; md5sum=5b58fcac958a5a6f247282695c07a56c; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2386; geoSampleAccession=GSM849331; labExpId=J96; bioRep=011N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=d6dadc01f9575c7b754d546ef84c4f58; size=546M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2384; geoSampleAccession=GSM849331; labExpId=J97; bioRep=012N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=04741d526d1ffb690877dba05983374e; size=901M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4522; geoSampleAccession=GSM849331; labExpId=J96,J97; bioRep=011N,012N; seqPlatform=Illumina_GA2x; type=gtf; md5sum=0c65e7b005ff546427a34167b406e989; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHelas3NucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HeLa-S3; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001145; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849331; labExpId=J96,J97; bioRep=011N,012N; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3NucleusPapTssHmm; type=bedRnaElements; md5sum=891e9deb6113746f742f5f433f839042; size=4.4M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2381; labExpId=K01; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapAlnRep1; type=bam; md5sum=d9a71394518093f651170aba5575e7bc; size=681M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2381; labExpId=K01; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapAlnRep1; type=bai; md5sum=2b04c00a9dac78af84b12bc50054029a; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2378; labExpId=K02; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapAlnRep2; type=bam; md5sum=64bc1bb977669eee40c05f36f4877c71; size=677M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2378; labExpId=K02; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapAlnRep2; type=bai; md5sum=8c2f983afda1e567ad24ee3c6662ff47; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2381; geoSampleAccession=GSM849335; labExpId=K01; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapMinusSignalRep1; type=bigWig; md5sum=82ac89a39f86ff1945ccfff997d5042b; size=9.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2378; geoSampleAccession=GSM849335; labExpId=K02; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapMinusSignalRep2; type=bigWig; md5sum=8393ef3f063acf9007dc29e119ec0a17; size=9.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2381; geoSampleAccession=GSM849335; labExpId=K01; bioRep=013WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapPlusSignalRep1; type=bigWig; md5sum=c51b79f62d0642bfe8b157ba6fe8c3b1; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2378; geoSampleAccession=GSM849335; labExpId=K02; bioRep=014WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapPlusSignalRep2; type=bigWig; md5sum=cb73a8f5e68669952b6e1435094a268e; size=9.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2381; geoSampleAccession=GSM849335; labExpId=K01; bioRep=013WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=f06a3ecb0f2c6184bbacff728a9367f7; size=812M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2378; geoSampleAccession=GSM849335; labExpId=K02; bioRep=014WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=0691a8a363cfa1d6f273ef1404975f25; size=813M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HepG2; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4539; geoSampleAccession=GSM849335; labExpId=K01,K02; bioRep=013WC,014WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=c683cb9e7a9af91d7fe6e41b21ad80f0; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CellPapTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HepG2; localization=cell; rnaExtract=longPolyA; submittedDataVersion=V2 - Filtered out the off end of chromosome reads; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001149; dateSubmitted=2011-12-09; dateUnrestricted=2012-09-09; subId=5147; geoSampleAccession=GSM849335; labExpId=K01,K02; bioRep=013WC,014WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CellPapTssHmmV2; type=bedRnaElements; md5sum=7f4369f9439d4874b8ca831ea97ca48e; size=7.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000343; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1801; labExpId=I42; bioRep=gen0125C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageHepg2CytosolPamAln; type=bam; md5sum=d09381a7e4e875d23af8f89ff8ef6c0e; size=417M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000343; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1801; labExpId=I42; bioRep=gen0125C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageHepg2CytosolPamAln; type=bai; md5sum=2bf3965cee622380ecc1bcbda318adc8; size=5.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000343; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1801; geoSampleAccession=GSM849351; labExpId=I42; bioRep=gen0125C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageHepg2CytosolPamMinusSignal; type=bigWig; md5sum=c02bc2a4d781f2be6ed726b8ed6dbe3e; size=8.2M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000343; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1801; geoSampleAccession=GSM849351; labExpId=I42; bioRep=gen0125C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageHepg2CytosolPamPlusSignal; type=bigWig; md5sum=89550776f2ae3c69924f69c6435bbcea; size=12M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000343; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849351; labExpId=I42; bioRep=gen0125C; type=fastq; md5sum=4f4d4cbaff9fc82b473d1295e50d68a9; size=534M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000343; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4514; geoSampleAccession=GSM849351; labExpId=I42; bioRep=gen0125C; type=gtf; md5sum=69355df2a822905da656e1e8a5256356; size=2.7M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HepG2; localization=cytosol; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000343; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849351; labExpId=I42; bioRep=gen0125C; tableName=wgEncodeRikenCageHepg2CytosolPamTssHmmV2; type=bedRnaElements; md5sum=6ebf486159b5a5f0510760d88b2fa1c3; size=5.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2357; labExpId=J89; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapAlnRep1; type=bam; md5sum=deb03288f236c8ed5ec8d270b45659fd; size=517M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2357; labExpId=J89; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapAlnRep1; type=bai; md5sum=7714b1ea9abdf87be13daf81045f440d; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2369; labExpId=J90; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapAlnRep2; type=bam; md5sum=b8ca0c61793baf48fa30fd30ba3ba097; size=600M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2369; labExpId=J90; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapAlnRep2; type=bai; md5sum=d997fd95ed5a8165275e303170327f03; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2357; geoSampleAccession=GSM849343; labExpId=J89; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapMinusSignalRep1; type=bigWig; md5sum=2ea39955c9b1c0f9eeda48377cce7b30; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2369; geoSampleAccession=GSM849343; labExpId=J90; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapMinusSignalRep2; type=bigWig; md5sum=92820cb9611cfcef2dce9613e83f3a1a; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2357; geoSampleAccession=GSM849343; labExpId=J89; bioRep=013C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapPlusSignalRep1; type=bigWig; md5sum=4f2463a54df250799d0312ffbc678e41; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2369; geoSampleAccession=GSM849343; labExpId=J90; bioRep=014C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapPlusSignalRep2; type=bigWig; md5sum=2e37e3e1ba081ffe36a3faf2845b337d; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2357; geoSampleAccession=GSM849343; labExpId=J89; bioRep=013C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=8fbbb9aeb0f5ea42681994c970f68958; size=656M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2369; geoSampleAccession=GSM849343; labExpId=J90; bioRep=014C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=7a2b2712a012cd2f641c4a9cf2f0567a; size=748M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4513; geoSampleAccession=GSM849343; labExpId=J89,J90; bioRep=013C,014C; seqPlatform=Illumina_GA2x; type=gtf; md5sum=0dbcfdad1b806f358beccefa182ff6b7; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2CytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HepG2; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001147; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849343; labExpId=J89,J90; bioRep=013C,014C; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2CytosolPapTssHmm; type=bedRnaElements; md5sum=625b2bdfd9e1dce5eb66891f4f9366e1; size=4.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleolusTotalAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000344; dateSubmitted=2010-01-13; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2124; labExpId=I68; bioRep=gen0127NL; tableName=wgEncodeRikenCageHepg2NucleolusTotalAln; type=bam; md5sum=274d002f9968cc52ba04eac8d0e4d1ec; size=1.3G; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleolusTotalAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000344; dateSubmitted=2010-01-13; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2124; labExpId=I68; bioRep=gen0127NL; tableName=wgEncodeRikenCageHepg2NucleolusTotalAln; type=bai; md5sum=328c756547822177624f1ced8a1c181d; size=5.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleolusTotalMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000344; dateSubmitted=2010-01-13; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2124; geoSampleAccession=GSM849344; labExpId=I68; bioRep=gen0127NL; tableName=wgEncodeRikenCageHepg2NucleolusTotalMinusSignal; type=bigWig; md5sum=b4620610e3fcdfe229ef24235b641733; size=20M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleolusTotalPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000344; dateSubmitted=2010-01-13; dateResubmitted=2010-08-23; dateUnrestricted=2010-10-13; subId=2124; geoSampleAccession=GSM849344; labExpId=I68; bioRep=gen0127NL; tableName=wgEncodeRikenCageHepg2NucleolusTotalPlusSignal; type=bigWig; md5sum=5d86d5e6d91a02ce636b273fdd482557; size=20M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleolusTotalRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000344; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849344; labExpId=I68; bioRep=gen0127NL; type=fastq; md5sum=fc15bf347bc65f48d85a7023a69307d8; size=1.5G; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleolusTotalTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HepG2; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000344; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4519; geoSampleAccession=GSM849344; labExpId=I68; bioRep=gen0127NL; type=gtf; md5sum=b8e6ac9083b35bc2d975acc006b12be7; size=2.8M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleolusTotalTssHmmV3.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HepG2; localization=nucleolus; rnaExtract=total; submittedDataVersion=V3 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000344; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5611; geoSampleAccession=GSM849344; labExpId=I68; bioRep=gen0127NL; tableName=wgEncodeRikenCageHepg2NucleolusTotalTssHmmV3; type=bedRnaElements; md5sum=aded59349b74b27d043035f7838240bd; size=11M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000345; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1802; labExpId=I44; bioRep=gen0128N; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageHepg2NucleusPamAln; type=bam; md5sum=53561b0344a0a0dd0816a302464d962d; size=805M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000345; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1802; labExpId=I44; bioRep=gen0128N; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageHepg2NucleusPamAln; type=bai; md5sum=c2c23a5afe21df4d184c52856ec1343c; size=5.7M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000345; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1802; geoSampleAccession=GSM849345; labExpId=I44; bioRep=gen0128N; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageHepg2NucleusPamMinusSignal; type=bigWig; md5sum=8c20300cab17417cde04b9f2137b72d3; size=27M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000345; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1802; geoSampleAccession=GSM849345; labExpId=I44; bioRep=gen0128N; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageHepg2NucleusPamPlusSignal; type=bigWig; md5sum=43f9c074b1d343f2bf9d8bd9e7125f38; size=28M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000345; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849345; labExpId=I44; bioRep=gen0128N; type=fastq; md5sum=03303fa51c6164b304c2ed50deb916db; size=779M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000345; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4512; geoSampleAccession=GSM849345; labExpId=I44; bioRep=gen0128N; type=gtf; md5sum=bbd730b098c78868bfddade44545455f; size=2.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HepG2; localization=nucleus; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000345; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849345; labExpId=I44; bioRep=gen0128N; tableName=wgEncodeRikenCageHepg2NucleusPamTssHmmV2; type=bedRnaElements; md5sum=150d8bd99d00e357a68c51f38d8a2a4c; size=9.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2375; labExpId=J98; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapAlnRep1; type=bam; md5sum=cedcde207c25f5915ba125669078692b; size=578M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2375; labExpId=J98; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapAlnRep1; type=bai; md5sum=cd804a00e266cff3e3c6276aff634ae5; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2366; labExpId=J99; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapAlnRep2; type=bam; md5sum=8b427967a1650d8f8f80b2bf621d7ae4; size=612M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2366; labExpId=J99; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapAlnRep2; type=bai; md5sum=615d7272e66bf4f482e798845fdf79bb; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2375; geoSampleAccession=GSM849334; labExpId=J98; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapMinusSignalRep1; type=bigWig; md5sum=92814b7e04f59782da8ea5890d0521a2; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2366; geoSampleAccession=GSM849334; labExpId=J99; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapMinusSignalRep2; type=bigWig; md5sum=5a1c86cb20a5d05c51e425094ee36dac; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2375; geoSampleAccession=GSM849334; labExpId=J98; bioRep=013N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapPlusSignalRep1; type=bigWig; md5sum=eef2741f84bc636e4a0e93ad2519359e; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2366; geoSampleAccession=GSM849334; labExpId=J99; bioRep=014N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapPlusSignalRep2; type=bigWig; md5sum=4aaba67241aa3e10eedf931262b3b043; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2375; geoSampleAccession=GSM849334; labExpId=J98; bioRep=013N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=c8f912f5218c074fe4eb7b0330d4402f; size=674M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2366; geoSampleAccession=GSM849334; labExpId=J99; bioRep=014N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=705e67a50698e2e90bcf0bda168c3721; size=717M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4528; geoSampleAccession=GSM849334; labExpId=J98,J99; bioRep=013N,014N; seqPlatform=Illumina_GA2x; type=gtf; md5sum=1673ba173a7af98a615d7b5a172f1874; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHepg2NucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HepG2; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001148; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849334; labExpId=J98,J99; bioRep=013N,014N; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHepg2NucleusPapTssHmm; type=bedRnaElements; md5sum=12474bb2ed3cc1498f0fdb1ac2a18f51; size=7.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6704; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep1; type=bam; md5sum=1baf70bea2b671d77dc705dd3374ec20; size=231M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6704; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep1; type=bai; md5sum=41bbe92efeaa4fd893e40cdef6489782; size=2.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6691; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep2; type=bam; md5sum=01a4934717b5e198e1978aced58db375; size=39M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6691; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep2; type=bai; md5sum=1dc602e2e80ac268b0168871332afcf0; size=2.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6641; geoSampleAccession=GSM979638; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapMinusRawRep1; type=bigWig; md5sum=c689a9e97c8a89b8325f2821fb05f6e8; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6629; geoSampleAccession=GSM979638; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapMinusRawRep2; type=bigWig; md5sum=3f75e07bc611cddbae035fc5f1236d63; size=858K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6641; geoSampleAccession=GSM979638; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapPlusRawRep1; type=bigWig; md5sum=8a883c171601c88ba031a385ad956b85; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6629; geoSampleAccession=GSM979638; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapPlusRawRep2; type=bigWig; md5sum=8d9adbd1a0d366831eaf5a2ee4fa2bb1; size=860K; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6480; geoSampleAccession=GSM979638; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4c4d15717956261850033f48573e49e5; size=407M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6468; geoSampleAccession=GSM979638; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2ecea8120606ae016b06c7e446b5e111; size=97M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHfdpcCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6712; geoSampleAccession=GSM979638; labExpId=CThi10103ACA,CThi10100GAT; bioRep=061WC,062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapTssHmm; type=bedRnaElements; md5sum=428dec786b51127afa8a70d753228f8c; size=338K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmepcCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6674; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapAlnRep1; type=bam; md5sum=2be4d9924e4951db44641dc2316b1c2a; size=526M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmepcCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6674; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapAlnRep1; type=bai; md5sum=0a1faac04b1e89f283228181464cdb42; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmepcCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6612; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapMinusRawRep1; type=bigWig; md5sum=b68db89e4c98872955073d47d31b0386; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmepcCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6612; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapPlusRawRep1; type=bigWig; md5sum=3e389290cf9e48d636cf6b5891646515; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmepcCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6452; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=8f51e124d754c1bdccb512e66aebc3d4; size=896M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmepcCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6722; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapTssHmm; type=bedRnaElements; md5sum=2086ceaa259db00df99625d501e85f06; size=1.1M; replicate=1; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6706; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep1; type=bam; md5sum=980046cc51b708327214eb2a634eb0e8; size=339M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6706; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep1; type=bai; md5sum=3a9804cc91fe78c3ee04812d65138d93; size=3.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6664; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep2; type=bam; md5sum=e2dc0ad2bea4d51a66d104e1067edf98; size=530M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6664; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep2; type=bai; md5sum=bea4c76fc37b7a93cf55f5ecbc43bc5a; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6644; geoSampleAccession=GSM979652; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapMinusRawRep1; type=bigWig; md5sum=b57164643803da6826596760dc823507; size=7.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6602; geoSampleAccession=GSM979652; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapMinusRawRep2; type=bigWig; md5sum=5f941c27d13a5e8fac1d9df4750e16f7; size=10M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6644; geoSampleAccession=GSM979652; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapPlusRawRep1; type=bigWig; md5sum=9467c8e83ff1f795b26a311d45484d04; size=7.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6602; geoSampleAccession=GSM979652; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapPlusRawRep2; type=bigWig; md5sum=86d9b9ceeadaa1b88cca2d32fa8e18ad; size=9.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6483; geoSampleAccession=GSM979652; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=601909b45f6cd13f0d746e0699d1f80f; size=587M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6442; geoSampleAccession=GSM979652; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=bb080a462e532f415e905fd1efb33265; size=930M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscatCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6714; geoSampleAccession=GSM979652; labExpId=CThi10105ACA,CThi10104GAT; bioRep=065WC,066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapTssHmm; type=bedRnaElements; md5sum=19c4ad122a079e2041c4a2989085c7ff; size=1.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6686; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep1; type=bam; md5sum=8a0443fb6ab8a7ea9853179771ff8333; size=318M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6686; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep1; type=bai; md5sum=5f8000827e6b44903ed1c6205732394b; size=3.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6684; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep2; type=bam; md5sum=579776f5ec2b0142872a30eb1e53e419; size=196M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6684; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep2; type=bai; md5sum=ce8ebefbe1aa690030a712c465732f08; size=2.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6624; geoSampleAccession=GSM979651; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapMinusRawRep1; type=bigWig; md5sum=085fca3bf647fbe0a9c507acc06ff188; size=5.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6622; geoSampleAccession=GSM979651; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapMinusRawRep2; type=bigWig; md5sum=a9bfecbd50178e599295da0d7290e542; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6624; geoSampleAccession=GSM979651; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapPlusRawRep1; type=bigWig; md5sum=120ee4dc72b1d20df23963c185cc8c14; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6622; geoSampleAccession=GSM979651; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapPlusRawRep2; type=bigWig; md5sum=27f7549d8ae1efe8549733a60c7a571b; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6464; geoSampleAccession=GSM979651; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0877bff47c35f382b23f3902679b2f4c; size=546M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6462; geoSampleAccession=GSM979651; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1f46d6cf80a224507c450105aa42c236; size=329M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscbmCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6711; geoSampleAccession=GSM979651; labExpId=CThi10103ATC,CThi10100ACA; bioRep=067WC,068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapTssHmm; type=bedRnaElements; md5sum=7cfa0a9e8866bd43ebb02ce293b54102; size=698K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6695; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep1; type=bam; md5sum=be3b67391fdf14fbdb3135d2047ce434; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6695; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep1; type=bai; md5sum=4fc482ef75f394323cf9b44668f14a07; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6700; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep2; type=bam; md5sum=0a69c061b50005b169d74c009cf6086a; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6700; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep2; type=bai; md5sum=76b9a4f767539d792e70c83a7bd97834; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6633; geoSampleAccession=GSM979650; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapMinusRawRep1; type=bigWig; md5sum=c1e598de2fbfb2c96c1ab53697bfc74f; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6639; geoSampleAccession=GSM979650; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapMinusRawRep2; type=bigWig; md5sum=b521039b2ecca4881401c3022b668c9d; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6633; geoSampleAccession=GSM979650; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapPlusRawRep1; type=bigWig; md5sum=de5fa530b3f3a11b421d72aeb6f129f7; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6639; geoSampleAccession=GSM979650; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapPlusRawRep2; type=bigWig; md5sum=0353c56ce570c4741371db0003d737fb; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6472; geoSampleAccession=GSM979650; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b13b5f26bb1893d3cf0a2c9083379922; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6478; geoSampleAccession=GSM979650; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=fde4f213ba6f3aee964e7167acc70a32; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHmscucCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6739; geoSampleAccession=GSM979650; labExpId=CThi10101CTT,CThi10100ATC; bioRep=069WC,070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapTssHmm; type=bedRnaElements; md5sum=acfb53556a373b84f867e7f1ee2e805d; size=2.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6658; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep1; type=bam; md5sum=85bb887a0af49de0eb64695681d2c7b3; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6658; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep1; type=bai; md5sum=3803eaea75416c948dc58ffa93bbeaf4; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6698; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep2; type=bam; md5sum=7e0523b3f331936f5a6c02acae139f88; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6698; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep2; type=bai; md5sum=e2f378c17e9abd3e7007cac4cee19d06; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6596; geoSampleAccession=GSM979640; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapMinusRawRep1; type=bigWig; md5sum=f93551aae06acec990e950b96b5bc5cd; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6636; geoSampleAccession=GSM979640; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapMinusRawRep2; type=bigWig; md5sum=73c9b58a82de1c4b59dc07cb605896cd; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6596; geoSampleAccession=GSM979640; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapPlusRawRep1; type=bigWig; md5sum=10e14a33d547389bef49228efb06b431; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6636; geoSampleAccession=GSM979640; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapPlusRawRep2; type=bigWig; md5sum=294e2e3c2b8a3c030fd2ef6184853f99; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6436; geoSampleAccession=GSM979640; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b2b468f53cfffef591e5373590e2baf2; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6475; geoSampleAccession=GSM979640; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f0eb0e43c546394631334cfcab12379d; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHobCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6716; geoSampleAccession=GSM979640; labExpId=CThi10036,CThi10037; bioRep=053WC,054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapTssHmm; type=bedRnaElements; md5sum=66d6a28d7dd699f81e2b2c9e1718e5da; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6685; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep1; type=bam; md5sum=530ec925fef20862f9fe9769d0b1c21a; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6685; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep1; type=bai; md5sum=e0e8a1ea4205ebc19b466108c33ad71b; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6690; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep2; type=bam; md5sum=6d73bb583fe274c89831579bc2aca3b0; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6690; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep2; type=bai; md5sum=d38c0a825824891a273bb7bc356a5b6b; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6623; geoSampleAccession=GSM979643; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapMinusRawRep1; type=bigWig; md5sum=1576d30e4978fb8846234c9b02565c1b; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6628; geoSampleAccession=GSM979643; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapMinusRawRep2; type=bigWig; md5sum=53e554a4290d7bda9306e8c131d28141; size=14M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6623; geoSampleAccession=GSM979643; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapPlusRawRep1; type=bigWig; md5sum=1c8c3f8e8680592033faf1530a4e777a; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6628; geoSampleAccession=GSM979643; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapPlusRawRep2; type=bigWig; md5sum=4ee11ac3731de8868264605ed67182ef; size=13M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6461; geoSampleAccession=GSM979643; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2fc004fabb88bdfb50bccf7b433e7044; size=3.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6467; geoSampleAccession=GSM979643; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a8416111bb2c818b05857daff8acc9e2; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpcplCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0101504.13,0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6742; geoSampleAccession=GSM979643; labExpId=CThi10057,CThi10105ATC; bioRep=071WC,072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapTssHmm; type=bedRnaElements; md5sum=9391d21a6b8f779958ce2dbbc384d076; size=1.8M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6672; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep1; type=bam; md5sum=9f9cb217ccef09079dba2460eb54008c; size=282M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6672; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep1; type=bai; md5sum=5f685ef9b1d100d930cfc334297fac78; size=3.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6682; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep2; type=bam; md5sum=f6e4abe3aca33a1e88becf0ce25cf11b; size=55M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6682; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep2; type=bai; md5sum=af44e35541853be7112327460716a6d0; size=2.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6610; geoSampleAccession=GSM979642; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapMinusRawRep1; type=bigWig; md5sum=0a3377455716db23914aceef8ab761e5; size=6.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6620; geoSampleAccession=GSM979642; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapMinusRawRep2; type=bigWig; md5sum=0b3d7328a67b0df52530a5e3d5345d40; size=2.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6610; geoSampleAccession=GSM979642; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapPlusRawRep1; type=bigWig; md5sum=d79e654f44e248aaf1781ce4a7f537a6; size=6.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6620; geoSampleAccession=GSM979642; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapPlusRawRep2; type=bigWig; md5sum=a8709a586ab01bcc73be2be002150efb; size=1.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6449; geoSampleAccession=GSM979642; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ff32096d5b9edad58554df8054b696ff; size=480M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6459; geoSampleAccession=GSM979642; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f537efe7b38a98b8ef4e37ff2189015f; size=92M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHpiepcCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6731; geoSampleAccession=GSM979642; labExpId=CThi10104ATC,CThi10101GAT; bioRep=073WC,074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapTssHmm; type=bedRnaElements; md5sum=cd52198e6b309dce58fc32b9cdd70088; size=513K; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6671; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep1; type=bam; md5sum=d8a789cc77f1e0e3be96e2d733321edb; size=868M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6671; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep1; type=bai; md5sum=03df28e1a279c8314e57fe56742e0edf; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6702; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep2; type=bam; md5sum=2e6a99fc78a6fd7c98c030c22ef69c11; size=566M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6702; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep2; type=bai; md5sum=a9876ca8257ed2bf83ebb53ecc965b72; size=3.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6609; geoSampleAccession=GSM979645; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapMinusRawRep1; type=bigWig; md5sum=5bcdaa0f32ac79bdb47b105f01374fc5; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6640; geoSampleAccession=GSM979645; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapMinusRawRep2; type=bigWig; md5sum=e035bc418866b3e580bb12695a40cda4; size=9.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6609; geoSampleAccession=GSM979645; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapPlusRawRep1; type=bigWig; md5sum=e348c0627c08f0e86d137e10a8ca3db0; size=15M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6640; geoSampleAccession=GSM979645; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapPlusRawRep2; type=bigWig; md5sum=cc842f2ceb1685f8d8c5a7cba94d83fe; size=9.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6448; geoSampleAccession=GSM979645; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d8234203a67f2d02bb0c405d2b9fb29a; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6479; geoSampleAccession=GSM979645; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=db899de1400ffcd4416b5230d3ef9dec; size=870M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHsavecCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6737; geoSampleAccession=GSM979645; labExpId=CThi10102ACA,CThi10102ATC; bioRep=093WC,094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapTssHmm; type=bedRnaElements; md5sum=534dba862caf1e62bacc5b7286bdc28c; size=1.3M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2376; labExpId=J78; bioRep=009WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapAlnRep1; type=bam; md5sum=537b2508198602e5da0c6f947a25146b; size=618M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2376; labExpId=J78; bioRep=009WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapAlnRep1; type=bai; md5sum=740f8a7b69eb12c1ef235e6557f29295; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2388; labExpId=J79; bioRep=010WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapAlnRep2; type=bam; md5sum=c50d709d79cd25c8de7b46bf3122db2a; size=626M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2388; labExpId=J79; bioRep=010WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapAlnRep2; type=bai; md5sum=7390e8b40729b84da2ecda1d8b64ae25; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2376; geoSampleAccession=GSM849327; labExpId=J78; bioRep=009WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapMinusSignalRep1; type=bigWig; md5sum=605d5f495f9db3ea5d60413739956ea8; size=7.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2388; geoSampleAccession=GSM849327; labExpId=J79; bioRep=010WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapMinusSignalRep2; type=bigWig; md5sum=ef982e6ab9386be510f833d95e3207a7; size=7.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2376; geoSampleAccession=GSM849327; labExpId=J78; bioRep=009WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapPlusSignalRep1; type=bigWig; md5sum=01dfb230ab89be13d8f70c2078362da8; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2388; geoSampleAccession=GSM849327; labExpId=J79; bioRep=010WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapPlusSignalRep2; type=bigWig; md5sum=e8c8190de5ff0064026fa1ac9b466bf9; size=6.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2376; geoSampleAccession=GSM849327; labExpId=J78; bioRep=009WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=a1c85ed9f1edd7fee962c93d5878ed18; size=770M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2388; geoSampleAccession=GSM849327; labExpId=J79; bioRep=010WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=03be2619488234789125162894879e2e; size=824M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HUVEC; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4503; geoSampleAccession=GSM849327; labExpId=J78,J79; bioRep=009WC,010WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=67489ff0adc8f8c09b908edff8bab0f5; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HUVEC; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849327; labExpId=J78,J79; bioRep=009WC,010WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapTssHmm; type=bedRnaElements; md5sum=f4239fd75aef86f7ca37999b30759f87; size=5.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000342; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1800; labExpId=I72; bioRep=gen0116C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageHuvecCytosolPamAln; type=bam; md5sum=a52493b98f0fa3a92d3b6a0185cb4b77; size=885M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000342; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1800; labExpId=I72; bioRep=gen0116C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageHuvecCytosolPamAln; type=bai; md5sum=6a9e4f8d3b34acd2b73c548cc9a5a8e2; size=5.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000342; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1800; geoSampleAccession=GSM849350; labExpId=I72; bioRep=gen0116C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageHuvecCytosolPamMinusSignal; type=bigWig; md5sum=0a572af5457e703ee9514005f13edf19; size=13M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000342; dateSubmitted=2010-01-13; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1800; geoSampleAccession=GSM849350; labExpId=I72; bioRep=gen0116C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageHuvecCytosolPamPlusSignal; type=bigWig; md5sum=6291b1e05295a86e8b2aa7e0b8ae0c05; size=13M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000342; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849350; labExpId=I72; bioRep=gen0116C; type=fastq; md5sum=f595e2b2f31e1d5be33425131b561044; size=499M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000342; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4523; geoSampleAccession=GSM849350; labExpId=I72; bioRep=gen0116C; type=gtf; md5sum=1b5216d531a772fe0ce5df1a72f44193; size=2.8M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HUVEC; localization=cytosol; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000342; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849350; labExpId=I72; bioRep=gen0116C; tableName=wgEncodeRikenCageHuvecCytosolPamTssHmmV2; type=bedRnaElements; md5sum=c2e3a62a746f0915746e3471cd24827b; size=6.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2368; labExpId=K03; bioRep=029C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapAlnRep3; type=bam; md5sum=405a779918393752aff80fef296423de; size=658M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2368; labExpId=K03; bioRep=029C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapAlnRep3; type=bai; md5sum=e1d72966bf49dbccc9dfcadb217e62de; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2354; labExpId=K04; bioRep=030C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapAlnRep4; type=bam; md5sum=5772c68d93fcca419418180b7407b10f; size=689M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2354; labExpId=K04; bioRep=030C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapAlnRep4; type=bai; md5sum=2010b74ae9ff5ca16c36269a696e49b4; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapMinusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2368; geoSampleAccession=GSM849324; labExpId=K03; bioRep=029C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapMinusSignalRep3; type=bigWig; md5sum=0af38b6061decd89498c9b035cefe734; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapMinusSignalRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2354; geoSampleAccession=GSM849324; labExpId=K04; bioRep=030C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapMinusSignalRep4; type=bigWig; md5sum=11384c6a20004845a1908588c9ce7f01; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapPlusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2368; geoSampleAccession=GSM849324; labExpId=K03; bioRep=029C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapPlusSignalRep3; type=bigWig; md5sum=78d7a2c1fbecbbcebf31141e47a4c3bd; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapPlusSignalRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2354; geoSampleAccession=GSM849324; labExpId=K04; bioRep=030C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapPlusSignalRep4; type=bigWig; md5sum=b7587592dd6dfd8ed87dabd3ee6df2c3; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2368; geoSampleAccession=GSM849324; labExpId=K03; bioRep=029C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=7a7073171fa24bcbac35da28fce57622; size=802M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2354; geoSampleAccession=GSM849324; labExpId=K04; bioRep=030C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=80f9a109c3769001e78f12701940aa6e; size=825M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4515; geoSampleAccession=GSM849324; labExpId=K03,K04; bioRep=029C,030C; seqPlatform=Illumina_GA2x; type=gtf; md5sum=27e96ed6b35f3f03a7d209e7a9502d06; size=3.1M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecCytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HUVEC; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001142; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849324; labExpId=K03,K04; bioRep=029C,030C; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCytosolPapTssHmm; type=bedRnaElements; md5sum=2f4e1bce2a46cfeeedd6889929499d5d; size=5.9M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPamAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002749; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6697; labExpId=CTig10027; bioRep=gen0162N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPamAlnRep1; type=bam; md5sum=2036093cd1efd5f367f2f0d6c1344ff7; size=678M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPamAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002749; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6697; labExpId=CTig10027; bioRep=gen0162N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPamAlnRep1; type=bai; md5sum=ea2fd5719f0a669e21196152b57e07c1; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPamMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002749; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6635; geoSampleAccession=GSM979644; labExpId=CTig10027; bioRep=gen0162N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPamMinusRawRep1; type=bigWig; md5sum=d7d6d4d6d6d6cbad8e155b9621909adc; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPamPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002749; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-31; subId=6635; geoSampleAccession=GSM979644; labExpId=CTig10027; bioRep=gen0162N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPamPlusRawRep1; type=bigWig; md5sum=c71d492d7c62fddc76b4efc098f1bc9d; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPamRawDataRep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002749; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6474; geoSampleAccession=GSM979644; labExpId=CTig10027; bioRep=gen0162N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=3f4c88c9224b2e8997b37754b9f4447b; size=1008M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPamTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HUVEC; localization=nucleus; rnaExtract=longNonPolyA; readType=1x36; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002749; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6741; geoSampleAccession=GSM979644; labExpId=CTig10027; bioRep=gen0162N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPamTssHmm; type=bedRnaElements; md5sum=1e6748fab032faa8a4d4df7a369f41e6; size=1.7M; replicate=162; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2377; labExpId=K05; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapAlnRep3; type=bam; md5sum=9049b048deef9813a507943b4a143a9d; size=825M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2377; labExpId=K05; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapAlnRep3; type=bai; md5sum=a98a9b6067cf2e4283391482d4a76d1c; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2356; labExpId=K06; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapAlnRep4; type=bam; md5sum=8dbdc63630485064eb8849443f87d8ef; size=785M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2356; labExpId=K06; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapAlnRep4; type=bai; md5sum=9b6e7df5b7b6138c8e9a1a713548ccb9; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapMinusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2377; geoSampleAccession=GSM849325; labExpId=K05; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapMinusSignalRep3; type=bigWig; md5sum=4b4c9685bc810855c8120de03a190608; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapMinusSignalRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2356; geoSampleAccession=GSM849325; labExpId=K06; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapMinusSignalRep4; type=bigWig; md5sum=36c37d8e3a87cb4ec71181fc38b2ab42; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapPlusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2377; geoSampleAccession=GSM849325; labExpId=K05; bioRep=029N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapPlusSignalRep3; type=bigWig; md5sum=5e374fa9c298c3b3201108e0d5ae6ae3; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapPlusSignalRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2356; geoSampleAccession=GSM849325; labExpId=K06; bioRep=030N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapPlusSignalRep4; type=bigWig; md5sum=ee75882cf87e463a5773b62139320725; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2377; geoSampleAccession=GSM849325; labExpId=K05; bioRep=029N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=b2436773be7fd0e1d2458a69484f53ef; size=844M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2356; geoSampleAccession=GSM849325; labExpId=K06; bioRep=030N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=2cdc65a2b7537beac4272727ad90de5e; size=813M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4497; geoSampleAccession=GSM849325; labExpId=K05,K06; bioRep=029N,030N; seqPlatform=Illumina_GA2x; type=gtf; md5sum=fd1da2b073e5315f72377b74a61f43c9; size=3.2M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHuvecNucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HUVEC; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001143; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849325; labExpId=K05,K06; bioRep=029N,030N; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecNucleusPapTssHmm; type=bedRnaElements; md5sum=57935352afce004be1f70f6f40a99ea0; size=10M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6655; labExpId=CThi10034; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapAlnRep1; type=bam; md5sum=b9d3b1c2f2908768756d57bdd4e08322; size=1.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6655; labExpId=CThi10034; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapAlnRep1; type=bai; md5sum=d6dc6494f9b0b93630ee382ba9fcce3f; size=3.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6673; labExpId=CThi10035; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapAlnRep2; type=bam; md5sum=dea871fe648c8d376e3b73f223d4b7fa; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6673; labExpId=CThi10035; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapAlnRep2; type=bai; md5sum=dd4b79a82e7f564b856f22fe3e643497; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6594; geoSampleAccession=GSM979660; labExpId=CThi10034; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapMinusRawRep1; type=bigWig; md5sum=41c4630ad4208bc1469e7afd59390d3c; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6611; geoSampleAccession=GSM979660; labExpId=CThi10035; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapMinusRawRep2; type=bigWig; md5sum=1e6e8e6cfd9a8f7c4904c9e7ada5fd1e; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6594; geoSampleAccession=GSM979660; labExpId=CThi10034; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapPlusRawRep1; type=bigWig; md5sum=f138ac1f31c150b07cf062249c47bd14; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6611; geoSampleAccession=GSM979660; labExpId=CThi10035; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapPlusRawRep2; type=bigWig; md5sum=706f3e2b39370f47c84ac2ed1452f438; size=16M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6433; geoSampleAccession=GSM979660; labExpId=CThi10034; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5fc59df23edea28a3d417e10d474fe45; size=2.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6450; geoSampleAccession=GSM979660; labExpId=CThi10035; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=101789c4fb73ae904a468529be5063f0; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHvmfCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6729; geoSampleAccession=GSM979660; labExpId=CThi10034,CThi10035; bioRep=051WC,052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapTssHmm; type=bedRnaElements; md5sum=e0759899d336dbf094ac38036181639f; size=1.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6663; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep1; type=bam; md5sum=955a78cf6652d5977d4e79211c31e9d0; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6663; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep1; type=bai; md5sum=dfba5cadc6009bc4173eed89157c66d2; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6680; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep2; type=bam; md5sum=8ec97ae6d082538cea50ce81046f9dba; size=358M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6680; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep2; type=bai; md5sum=98c34734b79b380cd5408b9115ca79ab; size=3.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6601; geoSampleAccession=GSM979661; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapMinusRawRep1; type=bigWig; md5sum=6dfa2d709169cb3c93229ae0c25abc5d; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6617; geoSampleAccession=GSM979661; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapMinusRawRep2; type=bigWig; md5sum=7e1d87a6f9cfb09e3251d1d1f88668cf; size=8.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6601; geoSampleAccession=GSM979661; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapPlusRawRep1; type=bigWig; md5sum=7715e67aca62a27c51f2734b3deacdbb; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6617; geoSampleAccession=GSM979661; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapPlusRawRep2; type=bigWig; md5sum=9f2fa6a405dffc931cfa231a462236b4; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6440; geoSampleAccession=GSM979661; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=bfe0beccc15bd7111be03465e76523cb; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6456; geoSampleAccession=GSM979661; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4b39033f59c0b4eda0fb1d26e63b60bc; size=555M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageHwpCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6724; geoSampleAccession=GSM979661; labExpId=CThi10101ACA,CThi10101ATC; bioRep=079WC,080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapTssHmm; type=bedRnaElements; md5sum=f4fdfaecc08086094a6bc4968dbb2452; size=1.6M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6699; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep1; type=bam; md5sum=c2335bded6de5331039157874f05cc4b; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6699; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep1; type=bai; md5sum=7738469cfaa9957e2bd0f96e01560460; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6705; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep2; type=bam; md5sum=5e684acbcc1101595867090c30c4248d; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6705; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep2; type=bai; md5sum=92c5defd0bbe610997a999cc1fc21dff; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6637; geoSampleAccession=GSM979656; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapMinusRawRep1; type=bigWig; md5sum=b2d0c91d42af965d82596f89ee2bcaca; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6643; geoSampleAccession=GSM979656; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapMinusRawRep2; type=bigWig; md5sum=216063c7658e4339b814d03911880c7e; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6637; geoSampleAccession=GSM979656; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapPlusRawRep1; type=bigWig; md5sum=563adaeef1fd7d4793b339c0893ccbee; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6643; geoSampleAccession=GSM979656; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapPlusRawRep2; type=bigWig; md5sum=5678a852bb2659e5d39f3175e57eafe2; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6476; geoSampleAccession=GSM979656; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=fd30013874d7b00aac4f0c096c285628; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6482; geoSampleAccession=GSM979656; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a6616539e4546f6a68129faa766383d8; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6740; geoSampleAccession=GSM979656; labExpId=CThi10016,CThi10018; bioRep=045WC,046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapTssHmm; type=bedRnaElements; md5sum=ed8a42b89e625c6c81d4ebad776bd405; size=4.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6650; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep1; type=bam; md5sum=f122c6385dc0f344731461807b3db92d; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6650; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep1; type=bai; md5sum=1f60da97236f425a6c26f4afc4bde66b; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6703; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep2; type=bam; md5sum=697dc4edb97813385ec00964f6233e0e; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6703; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep2; type=bai; md5sum=ae91cc7ef4df204611bf7af138dd7b68; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6588; geoSampleAccession=GSM979658; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapMinusRawRep1; type=bigWig; md5sum=d4e958a599f0c28f47f516b0e32c0901; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6642; geoSampleAccession=GSM979658; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapMinusRawRep2; type=bigWig; md5sum=676e843762c9928bd8259e354e7c9c67; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6588; geoSampleAccession=GSM979658; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapPlusRawRep1; type=bigWig; md5sum=25e760b51fe5be3a33da99a9193197bb; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6642; geoSampleAccession=GSM979658; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapPlusRawRep2; type=bigWig; md5sum=3d7e529799fd90aaec6c24d765ef3268; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6427; geoSampleAccession=GSM979658; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=dc92fbc1ab6eb9898acf2060b47302f1; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6481; geoSampleAccession=GSM979658; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=c34418680970e73d18e30c34b7efd929; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90CytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6720; geoSampleAccession=GSM979658; labExpId=CThi10017,CThi10019; bioRep=045C,046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapTssHmm; type=bedRnaElements; md5sum=1841fa887243d2fdb1735a574b00c840; size=4.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6651; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep1; type=bam; md5sum=6e57934b6bebc430b0ee9d601a611548; size=1.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6651; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep1; type=bai; md5sum=35afa06fb0ae3659a0ee6c70dc7b5b86; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6656; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep2; type=bam; md5sum=3472a0e19e670e505fbab834d7a7e22c; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6656; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep2; type=bai; md5sum=1d7ef806221488b825a2dd284f0bd922; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6589; geoSampleAccession=GSM979659; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapMinusRawRep1; type=bigWig; md5sum=93ef825b02d40e6adc9f92aa24f62f74; size=37M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6593; geoSampleAccession=GSM979659; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapMinusRawRep2; type=bigWig; md5sum=c4b12ca600e85edef7235905cb99bb07; size=46M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6589; geoSampleAccession=GSM979659; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapPlusRawRep1; type=bigWig; md5sum=3b354dbcdd2f5c85ea335d59a018f711; size=42M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6593; geoSampleAccession=GSM979659; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapPlusRawRep2; type=bigWig; md5sum=c10fa87ffac7ba4c2c3702f09c3a7e0a; size=53M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6428; geoSampleAccession=GSM979659; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cbcd86e519ee777e87e6fe14606bfec1; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6432; geoSampleAccession=GSM979659; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4720cb72dc8e4bcb44c96a666643f9c9; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageImr90NucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6721; geoSampleAccession=GSM979659; labExpId=CThi10025,CThi10026; bioRep=045N,046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapTssHmm; type=bedRnaElements; md5sum=62e8c293813ed138b39231bf6b4bcf11; size=6.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2359; labExpId=J70; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapAlnRep1; type=bam; md5sum=72474aac692f85f799fce7390f57b0e8; size=539M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2359; labExpId=J70; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapAlnRep1; type=bai; md5sum=3657976be404b8230c4dc7eccdb21712; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2362; labExpId=J71; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapAlnRep2; type=bam; md5sum=0b3b753312128c5bdaf4c26d5efa2fc2; size=577M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2362; labExpId=J71; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapAlnRep2; type=bai; md5sum=089b535d5f71fa43726527fcf8cda804; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2359; geoSampleAccession=GSM849365; labExpId=J70; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapMinusSignalRep1; type=bigWig; md5sum=6f086cc3562ae92ff913d473c0c43871; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2362; geoSampleAccession=GSM849365; labExpId=J71; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapMinusSignalRep2; type=bigWig; md5sum=fe038ad751c4879be5e432d34d020907; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2359; geoSampleAccession=GSM849365; labExpId=J70; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapPlusSignalRep1; type=bigWig; md5sum=78696f2a0d7ebf7fa80ac6fbc2101a0e; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2362; geoSampleAccession=GSM849365; labExpId=J71; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapPlusSignalRep2; type=bigWig; md5sum=a61180a4b5b5c4dc75f09eff75be3e34; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2359; geoSampleAccession=GSM849365; labExpId=J70; bioRep=001WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=acc5abcee6cfdfb9c2fad98ddb0154e0; size=677M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2362; geoSampleAccession=GSM849365; labExpId=J71; bioRep=002WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=a03037ef99001eea0f238178024b822b; size=742M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4532; geoSampleAccession=GSM849365; labExpId=J70,J71; bioRep=001WC,002WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=ec8f9f716ff2255a3e66ccb6c2ac0cdd; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849365; labExpId=J70,J71; bioRep=001WC,002WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapTssHmm; type=bedRnaElements; md5sum=510d14e533be6805b44fe0b0e1b8cf40; size=4.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562ChromatinTotalAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000334; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1804; labExpId=I35; bioRep=gen0134CH; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562ChromatinTotalAln; type=bam; md5sum=23910151fa6062f0e07eb805d812535c; size=466M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562ChromatinTotalAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=chromatin; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000334; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1804; labExpId=I35; bioRep=gen0134CH; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562ChromatinTotalAln; type=bai; md5sum=549d4ef1e835680f805b13fa97d48e3f; size=5.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562ChromatinTotalMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=chromatin; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000334; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1804; geoSampleAccession=GSM849333; labExpId=I35; bioRep=gen0134CH; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562ChromatinTotalMinusSignal; type=bigWig; md5sum=18d6ebd6a5f4e8c9b46e28ab6c2caf7a; size=8.2M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562ChromatinTotalPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=chromatin; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000334; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1804; geoSampleAccession=GSM849333; labExpId=I35; bioRep=gen0134CH; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562ChromatinTotalPlusSignal; type=bigWig; md5sum=71d8a7f9110b6ceb708acc2bc8e775ce; size=8.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562ChromatinTotalRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=chromatin; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000334; dateSubmitted=2009-02-19; dateUnrestricted=2009-11-19; subId=2433; geoSampleAccession=GSM849333; labExpId=I35; bioRep=gen0134CH; type=fastq; md5sum=e7b91fbdb9f9eac8018843d29034f46a; size=114M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562ChromatinTotalTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=chromatin; rnaExtract=total; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000334; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4516; geoSampleAccession=GSM849333; labExpId=I35; bioRep=gen0134CH; type=gtf; md5sum=bd2b281357f87f13534d58f8365d877a; size=2.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562ChromatinTotalTssHmmV3.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=chromatin; rnaExtract=total; submittedDataVersion=V3 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000334; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5611; geoSampleAccession=GSM849333; labExpId=I35; bioRep=gen0134CH; tableName=wgEncodeRikenCageK562ChromatinTotalTssHmmV3; type=bedRnaElements; md5sum=07d66d862bcf35dbd3dcf5295f3ddf8c; size=13M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1805; labExpId=I22; bioRep=gen0136C; softwareVersion=bowtie version 0.12.5; tableName=wgEncodeRikenCageK562CytosolPamAln; type=bam; md5sum=40da6c19aac1826ae56d9d1240a031db; size=329M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1805; labExpId=I22; bioRep=gen0136C; softwareVersion=bowtie version 0.12.5; tableName=wgEncodeRikenCageK562CytosolPamAln; type=bai; md5sum=b6d8d17af59357f22e473693624ba048; size=5.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1805; geoSampleAccession=GSM849353; labExpId=I22; bioRep=gen0136C; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562CytosolPamMinusSignal; type=bigWig; md5sum=25a45b47cf8b88b03a2adbdb3af5aed7; size=4.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1805; geoSampleAccession=GSM849353; labExpId=I22; bioRep=gen0136C; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562CytosolPamPlusSignal; type=bigWig; md5sum=ca6b99fc622308a19d709dd7557f52f3; size=3.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamRawData.csfasta.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849353; labExpId=I22; bioRep=gen0136C; type=csfasta; md5sum=f66fed331f01cd38826cc9ef27af4dec; size=319M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamRawData2.csqual.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData2; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849353; labExpId=I22; bioRep=gen0136C; type=csqual; md5sum=503137391d3ae1bf419039cf08628549; size=685M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4501; geoSampleAccession=GSM849353; labExpId=I22; bioRep=gen0136C; type=gtf; md5sum=ad261019740cf8d6dd841691bb31b2e0; size=2.7M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=cytosol; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000329; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849353; labExpId=I22; bioRep=gen0136C; tableName=wgEncodeRikenCageK562CytosolPamTssHmmV2; type=bedRnaElements; md5sum=8b21fc0f3bd9cf0f4ad0489f5477ce3a; size=4.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2009-02-04; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-09; subId=1806; labExpId=I40; bioRep=gen0137C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562CytosolPapAln; type=bam; md5sum=f412cac2323b33b71e378768059b294b; size=432M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2009-02-04; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-09; subId=1806; labExpId=I40; bioRep=gen0137C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562CytosolPapAln; type=bai; md5sum=ae958c869ea804040d2601a3293e0713; size=5.4M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2371; labExpId=J82; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapAlnRep1; type=bam; md5sum=895bcf6430707991d108281ddf1e8977; size=626M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2371; labExpId=J82; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapAlnRep1; type=bai; md5sum=4ac17fd619eb1549225c42c5eaf0b1dd; size=4.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2383; labExpId=J83; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapAlnRep2; type=bam; md5sum=f8e8546a0b4577b901612ab456004b6c; size=488M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2383; labExpId=J83; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapAlnRep2; type=bai; md5sum=567f5a3fd9e77f8b56e34dc9032a29f8; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2009-02-04; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-09; subId=1806; geoSampleAccession=GSM849339; labExpId=I40; bioRep=gen0137C; labVersion=bedtools v2.7.1; type=bigWig; md5sum=6bfd6923f449ef9a7153601d03a25c96; size=11M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2371; geoSampleAccession=GSM849339; labExpId=J82; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapMinusSignalRep1; type=bigWig; md5sum=a2d833c942e225c4ae693c0122fddcb8; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2383; geoSampleAccession=GSM849339; labExpId=J83; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapMinusSignalRep2; type=bigWig; md5sum=ba8ce41a46b5e708fd93e387fb1eedf8; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2009-02-04; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-09; subId=1806; geoSampleAccession=GSM849339; labExpId=I40; bioRep=gen0137C; labVersion=bedtools v2.7.1; type=bigWig; md5sum=7581b8936432aa99d1ec01329e202789; size=11M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2371; geoSampleAccession=GSM849339; labExpId=J82; bioRep=001C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapPlusSignalRep1; type=bigWig; md5sum=bb9304ed152e51a9926377537039a95d; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2383; geoSampleAccession=GSM849339; labExpId=J83; bioRep=002C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapPlusSignalRep2; type=bigWig; md5sum=a0855e5cb17e07b485a58c9ec00b71cb; size=3.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2009-02-04; dateResubmitted=2010-09-23; dateUnrestricted=2009-11-04; subId=2433; geoSampleAccession=GSM849339; labExpId=I40; bioRep=gen0137C; type=fastq; md5sum=a9333f15e65df9547095a0c5e4c12503; size=199M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2371; geoSampleAccession=GSM849339; labExpId=J82; bioRep=001C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=afc57d65410893ab36a0eaad51f5e2dc; size=806M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2383; geoSampleAccession=GSM849339; labExpId=J83; bioRep=002C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=72645dfebabab533fecf688bcaf079da; size=644M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4500; geoSampleAccession=GSM849339; labExpId=J82,J83; bioRep=001C,002C; seqPlatform=Illumina_GA2x; type=gtf; md5sum=3414a5d0b5885e68ca69de4e0d5e2bc3; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562CytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000332; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849339; labExpId=J82,J83; bioRep=001C,002C; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CytosolPapTssHmm; type=bedRnaElements; md5sum=99a1bb924355c0881bc6616a6e28b34d; size=3.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleolusTotalAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000335; dateSubmitted=2010-11-09; dateUnrestricted=2011-08-09; subId=2929; labExpId=I33; bioRep=gen0144NL; tableName=wgEncodeRikenCageK562NucleolusTotalAln; type=bam; md5sum=d2c294e100c3fc98f43cd5a4c77627ac; size=472M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleolusTotalAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000335; dateSubmitted=2010-11-09; dateUnrestricted=2011-08-09; subId=2929; labExpId=I33; bioRep=gen0144NL; tableName=wgEncodeRikenCageK562NucleolusTotalAln; type=bai; md5sum=e1ebbe752e9a6924ebfa1925195dadab; size=5.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleolusTotalMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000335; dateSubmitted=2010-11-09; dateUnrestricted=2011-08-09; subId=2929; geoSampleAccession=GSM849332; labExpId=I33; bioRep=gen0144NL; tableName=wgEncodeRikenCageK562NucleolusTotalMinusSignal; type=bigWig; md5sum=7d445026a18f2b1c554e2f0c3ebf8f8a; size=15M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleolusTotalPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000335; dateSubmitted=2010-11-09; dateUnrestricted=2011-08-09; subId=2929; geoSampleAccession=GSM849332; labExpId=I33; bioRep=gen0144NL; tableName=wgEncodeRikenCageK562NucleolusTotalPlusSignal; type=bigWig; md5sum=cdc9ca00446c34277d4087560af6350e; size=21M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleolusTotalRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000335; dateSubmitted=2010-11-09; dateUnrestricted=2011-08-09; subId=2929; geoSampleAccession=GSM849332; labExpId=I33; bioRep=gen0144NL; type=fastq; md5sum=fe79eac36ebccb42996f6564d9b2e370; size=750M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleolusTotalTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=nucleolus; rnaExtract=total; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000335; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4507; geoSampleAccession=GSM849332; labExpId=I33; bioRep=gen0144NL; type=gtf; md5sum=da0e5b9709d2a74333146e247c085781; size=2.7M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleolusTotalTssHmmV3.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=nucleolus; rnaExtract=total; submittedDataVersion=V3 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000335; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5611; geoSampleAccession=GSM849332; labExpId=I33; bioRep=gen0144NL; tableName=wgEncodeRikenCageK562NucleolusTotalTssHmmV3; type=bedRnaElements; md5sum=b563064e57ecacaac656b0392f4b611a; size=13M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleoplasmTotalAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000336; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1808; labExpId=I34; bioRep=gen0147NP; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562NucleoplasmTotalAln; type=bam; md5sum=979b0afae494798eee9261abb41b5674; size=544M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleoplasmTotalAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleoplasm; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000336; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1808; labExpId=I34; bioRep=gen0147NP; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562NucleoplasmTotalAln; type=bai; md5sum=5cf2f271990b9f3f1d8c9e064e6fb0ec; size=5.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleoplasmTotalMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000336; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1808; geoSampleAccession=GSM849340; labExpId=I34; bioRep=gen0147NP; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562NucleoplasmTotalMinusSignal; type=bigWig; md5sum=4deb2a5079895e41d1912971f390f3fa; size=23M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleoplasmTotalPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=nucleoplasm; rnaExtract=total; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000336; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1808; geoSampleAccession=GSM849340; labExpId=I34; bioRep=gen0147NP; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562NucleoplasmTotalPlusSignal; type=bigWig; md5sum=b1025cf17ea4d9ae297fb89fba57fe0b; size=35M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleoplasmTotalRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=nucleoplasm; rnaExtract=total; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000336; dateSubmitted=2009-02-19; dateUnrestricted=2009-11-19; subId=2433; geoSampleAccession=GSM849340; labExpId=I34; bioRep=gen0147NP; type=fastq; md5sum=14e822fa3eb825ec9b71965e69c2fbfa; size=93M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleoplasmTotalTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=nucleoplasm; rnaExtract=total; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000336; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4525; geoSampleAccession=GSM849340; labExpId=I34; bioRep=gen0147NP; type=gtf; md5sum=537eb3084e7b1fe1355d51c864052501; size=2.7M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleoplasmTotalTssHmmV3.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=nucleoplasm; rnaExtract=total; submittedDataVersion=V3 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000336; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5611; geoSampleAccession=GSM849340; labExpId=I34; bioRep=gen0147NP; tableName=wgEncodeRikenCageK562NucleoplasmTotalTssHmmV3; type=bedRnaElements; md5sum=2eae11d16ec5e36eac5633473bc7f5f5; size=14M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2008-12-09; dateResubmitted=2010-08-26; dateUnrestricted=2009-09-09; subId=2127; labExpId=I23; bioRep=gen0149N; tableName=wgEncodeRikenCageK562NucleusPamAln; type=bam; md5sum=a77cd54e73cd13920cbd94f9d411b334; size=477M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2008-12-09; dateResubmitted=2010-08-26; dateUnrestricted=2009-09-09; subId=2127; labExpId=I23; bioRep=gen0149N; tableName=wgEncodeRikenCageK562NucleusPamAln; type=bai; md5sum=1d8e0f06468efeffd4639cc82672d959; size=5.5M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2008-12-09; dateResubmitted=2010-08-26; dateUnrestricted=2009-09-09; subId=2127; geoSampleAccession=GSM849337; labExpId=I23; bioRep=gen0149N; tableName=wgEncodeRikenCageK562NucleusPamMinusSignal; type=bigWig; md5sum=f1ecbb07206d715ab314c3deb96307fd; size=16M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2008-12-09; dateResubmitted=2010-08-26; dateUnrestricted=2009-09-09; subId=2127; geoSampleAccession=GSM849337; labExpId=I23; bioRep=gen0149N; tableName=wgEncodeRikenCageK562NucleusPamPlusSignal; type=bigWig; md5sum=4925d0a5508ed083b599c0bc5cdc02b1; size=14M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamRawData.csfasta.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849337; labExpId=I23; bioRep=gen0149N; type=csfasta; md5sum=9d7b82387ebad327206f8450755d8064; size=395M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamRawData2.csqual.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData2; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849337; labExpId=I23; bioRep=gen0149N; type=csqual; md5sum=17e7bf564ec690be04203e2f00c08fb0; size=845M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4537; geoSampleAccession=GSM849337; labExpId=I23; bioRep=gen0149N; type=gtf; md5sum=c0327cbaaf7e2753ca35b00435915c9d; size=2.7M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=nucleus; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000330; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849337; labExpId=I23; bioRep=gen0149N; tableName=wgEncodeRikenCageK562NucleusPamTssHmmV2; type=bedRnaElements; md5sum=91864157643c796f3ac73b564c9fe688; size=9.8M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2367; labExpId=J91; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapAlnRep1; type=bam; md5sum=7095cc38763f444217fcce8f70b3562a; size=620M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2367; labExpId=J91; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapAlnRep1; type=bai; md5sum=28dd5f1428870c45f78e513a31c77d1e; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2358; labExpId=J92; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapAlnRep2; type=bam; md5sum=42b508a3c9c0f650ea0c9a329f5390e0; size=568M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2358; labExpId=J92; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapAlnRep2; type=bai; md5sum=841ce40b622cbeb4920645ba0fa37b60; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2367; geoSampleAccession=GSM849338; labExpId=J91; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapMinusSignalRep1; type=bigWig; md5sum=b5fd0f7d76d85c01c7f2ce1fb8594ded; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2358; geoSampleAccession=GSM849338; labExpId=J92; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapMinusSignalRep2; type=bigWig; md5sum=15af3feafc52f392285999ffb37d1c63; size=9.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2367; geoSampleAccession=GSM849338; labExpId=J91; bioRep=001N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapPlusSignalRep1; type=bigWig; md5sum=4668f5224bb32d2f95ecfb32c80200d3; size=9.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2358; geoSampleAccession=GSM849338; labExpId=J92; bioRep=002N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapPlusSignalRep2; type=bigWig; md5sum=36303939dc404d37bc19cd51620e6e33; size=9.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2367; geoSampleAccession=GSM849338; labExpId=J91; bioRep=001N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=443107342a6cc9c0dbf6b7a4982f4b7d; size=776M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=nucleus; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2358; geoSampleAccession=GSM849338; labExpId=J92; bioRep=002N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=38a90912bd3faa0a7922b017afd685dc; size=686M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4518; geoSampleAccession=GSM849338; labExpId=J91,J92; bioRep=001N,002N; seqPlatform=Illumina_GA2x; type=gtf; md5sum=35317534002907553886dc557ac955a9; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562NucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000333; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849338; labExpId=J91,J92; bioRep=001N,002N; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562NucleusPapTssHmm; type=bedRnaElements; md5sum=c4cf529af320151c7948e604c45f45b3; size=6.5M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562PolysomePamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=polysome; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000337; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1810; labExpId=I32; bioRep=gen0152P; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562PolysomePamAln; type=bam; md5sum=6e5c518d2b24e9b5f819a7f8e12e4e13; size=400M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562PolysomePamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=polysome; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000337; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1810; labExpId=I32; bioRep=gen0152P; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageK562PolysomePamAln; type=bai; md5sum=58ccd47a6621c8c23b815a3d4d80a8c2; size=5.4M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562PolysomePamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=K562; localization=polysome; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000337; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1810; geoSampleAccession=GSM849354; labExpId=I32; bioRep=gen0152P; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562PolysomePamMinusSignal; type=bigWig; md5sum=2a67aaedcdcb0db5677862869690a278; size=11M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562PolysomePamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=K562; localization=polysome; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000337; dateSubmitted=2009-02-19; dateResubmitted=2010-06-21; dateUnrestricted=2009-11-19; subId=1810; geoSampleAccession=GSM849354; labExpId=I32; bioRep=gen0152P; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageK562PolysomePamPlusSignal; type=bigWig; md5sum=bedc4bae7b7243f4eed278ceb8ca8158; size=14M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562PolysomePamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=K562; localization=polysome; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000337; dateSubmitted=2009-02-19; dateUnrestricted=2009-11-19; subId=2433; geoSampleAccession=GSM849354; labExpId=I32; bioRep=gen0152P; type=fastq; md5sum=806eacce6b100c39691379c3d0f2c689; size=132M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562PolysomePamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=K562; localization=polysome; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000337; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4511; geoSampleAccession=GSM849354; labExpId=I32; bioRep=gen0152P; type=gtf; md5sum=e8e9e04367062b18b3cda02d4833760c; size=2.7M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageK562PolysomePamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=K562; localization=polysome; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000337; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849354; labExpId=I32; bioRep=gen0152P; tableName=wgEncodeRikenCageK562PolysomePamTssHmmV2; type=bedRnaElements; md5sum=f61ee82416ace47764beae04bbcddd94; size=9.4M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2365; labExpId=K07; bioRep=015WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapAlnRep1; type=bam; md5sum=db7303df970c7760e1e0adc88dbcff8b; size=748M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2365; labExpId=K07; bioRep=015WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapAlnRep1; type=bai; md5sum=08df05de6bf93c0ce061de6fee13f36a; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3425; labExpId=K11; bioRep=016WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapAlnRep2; type=bam; md5sum=c50051557b805f73374c50f331822916; size=517M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3425; labExpId=K11; bioRep=016WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapAlnRep2; type=bai; md5sum=6ec3fa7cebc12c17772031a6121d4adb; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-06-17; dateUnrestricted=2012-03-17; subId=4332; geoSampleAccession=GSM849364; labExpId=K11; bioRep=016WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapMinusRawRep2; type=bigWig; md5sum=cedd987a5cc19fccbbb24af8de8c7381; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2365; geoSampleAccession=GSM849364; labExpId=K07; bioRep=015WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapMinusSignalRep1; type=bigWig; md5sum=eb8a6806e1430468c0fb7a7376d42fd8; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-06-17; dateUnrestricted=2012-03-17; subId=4332; geoSampleAccession=GSM849364; labExpId=K11; bioRep=016WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapPlusRawRep2; type=bigWig; md5sum=92c3da85a2c004409f982fee8327f93c; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2365; geoSampleAccession=GSM849364; labExpId=K07; bioRep=015WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapPlusSignalRep1; type=bigWig; md5sum=5e98104d551182c37b3b820bdbc822c8; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapRawDataRep1.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2365; geoSampleAccession=GSM849364; labExpId=K07; bioRep=015WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=b52bc0da6e052c54a2b087cd427ad729; size=871M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3425; geoSampleAccession=GSM849364; labExpId=K11; bioRep=016WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=9bd8a2a71306b9d94f44abe10cf2ad78; size=317M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4521; geoSampleAccession=GSM849364; labExpId=K07,K11; bioRep=015WC,016WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=ccccc512cf479b0d8643dd787f1f4561; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=MCF-7; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849364; labExpId=K07,K11; bioRep=015WC,016WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapTssHmm; type=bedRnaElements; md5sum=32fd7d2176d2f79b610fc49696232122; size=3.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6678; labExpId=CThi10051; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapAlnRep3; type=bam; md5sum=790a2e0fd18ce20006120ef89adce32b; size=801M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6678; labExpId=CThi10051; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapAlnRep3; type=bai; md5sum=9ce76cdd9d5465ba03a9421e6a004e6a; size=4.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6667; labExpId=CThi10053; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapAlnRep4; type=bam; md5sum=7f52832695331b51b7a91e295e8eab63; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6667; labExpId=CThi10053; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapAlnRep4; type=bai; md5sum=ece158469bd5cc4cbc795daa5b590d9a; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6616; geoSampleAccession=GSM979657; labExpId=CThi10051; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapMinusRawRep3; type=bigWig; md5sum=9da6bbc468e54e0cb32e15cea3572b3e; size=19M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6604; geoSampleAccession=GSM979657; labExpId=CThi10053; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapMinusRawRep4; type=bigWig; md5sum=eb6427ffa72c876eaacef77828235d10; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6616; geoSampleAccession=GSM979657; labExpId=CThi10051; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapPlusRawRep3; type=bigWig; md5sum=d466d32670ca9eee35e756ee4d6fda23; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6604; geoSampleAccession=GSM979657; labExpId=CThi10053; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapPlusRawRep4; type=bigWig; md5sum=42ee08ebf91a3869b1f476299d2d5c0e; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6455; geoSampleAccession=GSM979657; labExpId=CThi10051; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=252ce99e9ad2fdc4e09952f2e011e977; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6443; geoSampleAccession=GSM979657; labExpId=CThi10053; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0b8f1825f97fd516555d03a6fdc04e16; size=2.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7CytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6728; geoSampleAccession=GSM979657; labExpId=CThi10051,CThi10053; bioRep=089C,090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapTssHmm; type=bedRnaElements; md5sum=9b99df1d4a662162004889071f8d5f35; size=3.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-29; dateUnrestricted=2012-12-29; subId=6551; labExpId=CThi10052; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapAlnRep3; type=bam; md5sum=e77c33cc1ed374784098ca11c942896c; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-29; dateUnrestricted=2012-12-29; subId=6551; labExpId=CThi10052; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapAlnRep3; type=bai; md5sum=ca8042b59036a336ded8bd0db61d7e4e; size=5.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6653; labExpId=CThi10054; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapAlnRep4; type=bam; md5sum=2d60217c4e2133eb02ab17848630bdbe; size=519M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6653; labExpId=CThi10054; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapAlnRep4; type=bai; md5sum=9ce367b18e6d37f74d0e3d2eeb83bb21; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6586; geoSampleAccession=GSM979654; labExpId=CThi10052; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapMinusRawRep3; type=bigWig; md5sum=a61954a28f297b5d3cf1e24a49daa182; size=37M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6591; geoSampleAccession=GSM979654; labExpId=CThi10054; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapMinusRawRep4; type=bigWig; md5sum=cb00d6cf5f7987f5b830a9583d0ce14f; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6586; geoSampleAccession=GSM979654; labExpId=CThi10052; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapPlusRawRep3; type=bigWig; md5sum=509e54ada9595995afafcb9413e740bc; size=42M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6591; geoSampleAccession=GSM979654; labExpId=CThi10054; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapPlusRawRep4; type=bigWig; md5sum=2f996af51e9645fa94b47096823874b2; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6425; geoSampleAccession=GSM979654; labExpId=CThi10052; bioRep=089N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=561ea1f5367f35e6b0c68cd8c0926384; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6430; geoSampleAccession=GSM979654; labExpId=CThi10054; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=3b22221eab40e9bde8ba7b5faaa2539b; size=973M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMcf7NucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6738; geoSampleAccession=GSM979654; labExpId=CThi10052,CThi10054; bioRep=089N,090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapTssHmm; type=bedRnaElements; md5sum=2cad78608842b890816b348a2f401faa; size=4.5M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6649; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep1; type=bam; md5sum=227796481580d16e5502d58297b33d31; size=1.3G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6649; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep1; type=bai; md5sum=8d4ef758fed28b6b34f06aa70b4bc5fe; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6683; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep2; type=bam; md5sum=4c8c7dfec9b4ef166d8fc55b62b5770d; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6683; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep2; type=bai; md5sum=ae81d4ca260f27eb2abe262d68be73f4; size=5.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6587; geoSampleAccession=GSM979655; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapMinusRawRep1; type=bigWig; md5sum=ccb9c91e263282b3235e39b002f8bc0c; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6621; geoSampleAccession=GSM979655; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapMinusRawRep2; type=bigWig; md5sum=7e8709967ca09e9e7959e5cd0d5b829c; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6587; geoSampleAccession=GSM979655; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapPlusRawRep1; type=bigWig; md5sum=1849459d601e26a645ff55bdc1b4d913; size=28M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6621; geoSampleAccession=GSM979655; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapPlusRawRep2; type=bigWig; md5sum=9aa4c0910bafb529c27223690f8ced0a; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6426; geoSampleAccession=GSM979655; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=77f1f2306ae9208dad1e0938509444dd; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6460; geoSampleAccession=GSM979655; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b7ac3bdeecb796f7efcc375b782c9b39; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageMonocd14CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6715; geoSampleAccession=GSM979655; labExpId=CThi10021,CThi10022; bioRep=039WC,040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapTssHmm; type=bedRnaElements; md5sum=e44371b91fd0bb68b25c4231941fe096; size=2.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6694; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep1; type=bam; md5sum=f8a20215289c5f3f5350100b6f2d5fc0; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6694; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep1; type=bai; md5sum=b3330e915ab29c8788baf882ac68b5eb; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6696; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep2; type=bam; md5sum=2afca48f2a1806ebb2fb6880c9ac3b4c; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6696; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep2; type=bai; md5sum=af76291ddb700a454f79652df8b844d3; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6631; geoSampleAccession=GSM979662; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapMinusRawRep1; type=bigWig; md5sum=790b563849165cb855ed4ffb324a91a2; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6634; geoSampleAccession=GSM979662; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapMinusRawRep2; type=bigWig; md5sum=5c593d1118d79c30fe111c356272593f; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6631; geoSampleAccession=GSM979662; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapPlusRawRep1; type=bigWig; md5sum=cb80d317a9ef95a15297d99a355b15d9; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6634; geoSampleAccession=GSM979662; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapPlusRawRep2; type=bigWig; md5sum=92ba0bc620b30dbe71f544d9ad71d91a; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6469; geoSampleAccession=GSM979662; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b43d322b489b0d416e7c2014cd356a47; size=3.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6473; geoSampleAccession=GSM979662; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=7c15e090180a3b883344bf0f2ac3d730; size=2.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhdfCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6730; geoSampleAccession=GSM979662; labExpId=CThi10032,CThi10033; bioRep=049WC,050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapTssHmm; type=bedRnaElements; md5sum=590935f5c6400900191a9724fdd1eaff; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep1; type=bam; md5sum=883264f44451a2e311de7c8797b3e1d4; size=587M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep1; type=bai; md5sum=bca070302983d4e307c087bd7e94c488; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep2; type=bam; md5sum=f5326f647a5302771f1ea7625f4d7042; size=601M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep2; type=bai; md5sum=d44b51e1de7b76a3d47a4793671b7c69; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapMinusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; geoSampleAccession=GSM849367; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapMinusSignalRep1; type=bigWig; md5sum=cb87b610e265b22898e57000cce919f8; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; geoSampleAccession=GSM849367; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapMinusSignalRep2; type=bigWig; md5sum=f6130549c92a04c88a95771417f92546; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapPlusSignalRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; geoSampleAccession=GSM849367; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapPlusSignalRep1; type=bigWig; md5sum=81a5abe828ab0b1b4987b4bcbe20643b; size=4.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; geoSampleAccession=GSM849367; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapPlusSignalRep2; type=bigWig; md5sum=e26630bd52e58208c4acd1c11cbe4b46; size=4.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; geoSampleAccession=GSM849367; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=91f153e228713d2d1a13f59c1bbc5940; size=759M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; geoSampleAccession=GSM849367; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=3332bce9c14895d69029476b99cfcf9c; size=762M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=NHEK; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4499; geoSampleAccession=GSM849367; labExpId=J76,J77; bioRep=007WC,008WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=87467c120ff6dbaf356641f056345f11; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEK; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849367; labExpId=J76,J77; bioRep=007WC,008WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapTssHmm; type=bedRnaElements; md5sum=6b12bf2ae2ba24248778617904d74267; size=4.0M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000346; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1811; labExpId=I70; bioRep=gen0155C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageNhekCytosolPamAln; type=bam; md5sum=893a566d89dae3fa2944c35f6c339c96; size=527M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000346; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1811; labExpId=I70; bioRep=gen0155C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageNhekCytosolPamAln; type=bai; md5sum=291520a2a946b56c432c2d0f2684c005; size=5.3M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000346; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1811; geoSampleAccession=GSM849346; labExpId=I70; bioRep=gen0155C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageNhekCytosolPamMinusSignal; type=bigWig; md5sum=599d873f455c6a2804433bbd979862db; size=5.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000346; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1811; geoSampleAccession=GSM849346; labExpId=I70; bioRep=gen0155C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageNhekCytosolPamPlusSignal; type=bigWig; md5sum=665dbad88c377d41c6ab12cda3fabc97; size=5.0M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000346; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849346; labExpId=I70; bioRep=gen0155C; type=fastq; md5sum=dc2f4bdb77604cc83ac513d1bce01e9c; size=800M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000346; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4533; geoSampleAccession=GSM849346; labExpId=I70; bioRep=gen0155C; type=gtf; md5sum=001b69ac44954bc7f76715f19bc62ed4; size=2.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEK; localization=cytosol; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000346; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849346; labExpId=I70; bioRep=gen0155C; tableName=wgEncodeRikenCageNhekCytosolPamTssHmmV2; type=bedRnaElements; md5sum=3dedb59944d4684ea978ac85e5aecbe9; size=3.2M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2373; labExpId=K08; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapAlnRep3; type=bam; md5sum=2b048dee3ece6207be96d584917172db; size=681M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2373; labExpId=K08; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapAlnRep3; type=bai; md5sum=508aff49eb1d72bdff00634d59aa8c07; size=5.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3420; labExpId=K20; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapAlnRep4; type=bam; md5sum=0826bda15b1784b4db2c45379c741a39; size=448M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3420; labExpId=K20; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapAlnRep4; type=bai; md5sum=b89c7d7ba0d1ebfa11c18bb492f33cbd; size=4.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2011-05-31; dateUnrestricted=2012-03-02; subId=4166; geoSampleAccession=GSM849366; labExpId=K20; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapMinusRawRep4; type=bigWig; md5sum=b4b58eda0a31f20123eb8c137c675279; size=9.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapMinusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2373; geoSampleAccession=GSM849366; labExpId=K08; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapMinusSignalRep3; type=bigWig; md5sum=41920333b916209b8881297a58fd6e0b; size=5.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2011-05-31; dateUnrestricted=2012-03-02; subId=4166; geoSampleAccession=GSM849366; labExpId=K20; bioRep=028C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapPlusRawRep4; type=bigWig; md5sum=60e40619a63615bb8def540ced7cd844; size=9.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapPlusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2373; geoSampleAccession=GSM849366; labExpId=K08; bioRep=027C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapPlusSignalRep3; type=bigWig; md5sum=7dfd1736962c08aa755f321bb8848e8c; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2373; geoSampleAccession=GSM849366; labExpId=K08; bioRep=027C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=98d0763fc02162d12115b7945d95660e; size=814M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; replicate=4; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3420; geoSampleAccession=GSM849366; labExpId=K20; bioRep=028C; seqPlatform=Illumina_GA2x; type=fastq; md5sum=b304c6e398746c4a887b39abd10c7e50; size=544M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4502; geoSampleAccession=GSM849366; labExpId=K08,K20; bioRep=027C,028C; seqPlatform=Illumina_GA2x; type=gtf; md5sum=cef0c282ea69c47517e16a07e7b572ca; size=3.0M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekCytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEK; localization=cytosol; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001153; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849366; labExpId=K08,K20; bioRep=027C,028C; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCytosolPapTssHmm; type=bedRnaElements; md5sum=30acc9c063cd2ea29428b2dd192dd703; size=3.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000347; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1812; labExpId=I71; bioRep=gen0157N; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageNhekNucleusPamAln; type=bam; md5sum=ea5528ee53c5fe8fd0ee3c41be3942e7; size=1.2G; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000347; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1812; labExpId=I71; bioRep=gen0157N; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageNhekNucleusPamAln; type=bai; md5sum=c609c9316bbc0e80e8c43d57802c0fa2; size=5.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000347; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1812; geoSampleAccession=GSM849347; labExpId=I71; bioRep=gen0157N; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageNhekNucleusPamMinusSignal; type=bigWig; md5sum=7585ee170197c1585a4483590dcb92eb; size=21M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000347; dateSubmitted=2010-01-14; dateResubmitted=2010-06-21; dateUnrestricted=2010-10-13; subId=1812; geoSampleAccession=GSM849347; labExpId=I71; bioRep=gen0157N; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageNhekNucleusPamPlusSignal; type=bigWig; md5sum=5aa7077b8e7071e16411d442e9941dbb; size=22M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPamRawData.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000347; dateSubmitted=2010-01-14; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849347; labExpId=I71; bioRep=gen0157N; type=fastq; md5sum=e14364084c863ce7581d29e6a05606d8; size=1.1G; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPamTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000347; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4538; geoSampleAccession=GSM849347; labExpId=I71; bioRep=gen0157N; type=gtf; md5sum=37d7b6fecf0df39f6f5ddf6fefba4a13; size=2.8M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPamTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEK; localization=nucleus; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000347; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849347; labExpId=I71; bioRep=gen0157N; tableName=wgEncodeRikenCageNhekNucleusPamTssHmmV2; type=bedRnaElements; md5sum=9308b023abaf86668128274b2c9d4160; size=6.3M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2382; labExpId=K09; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapAlnRep3; type=bam; md5sum=1c62e411bd0588cf11a275c2df0a8214; size=500M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2382; labExpId=K09; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapAlnRep3; type=bai; md5sum=46709d4998248b7a42e11960f67218b3; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=1x36; replicate=4; donorId=4F1155J; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6681; labExpId=CTig10011; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapAlnRep4; type=bam; md5sum=7b4403945dfd25eea68663f37daf72e3; size=638M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=1x36; replicate=4; donorId=4F1155J; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6681; labExpId=CTig10011; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapAlnRep4; type=bai; md5sum=fcf8ee6cab707d71e002b6568d5b44a2; size=5.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=1x36; replicate=4; donorId=4F1155J; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6619; geoSampleAccession=GSM849361; labExpId=CTig10011; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapMinusRawRep4; type=bigWig; md5sum=3e5f0de9c49e86c9179f1ecc601bb69c; size=24M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapMinusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2382; geoSampleAccession=GSM849361; labExpId=K09; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapMinusSignalRep3; type=bigWig; md5sum=ec648f02819365949f5daed76290dc0d; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=1x36; replicate=4; donorId=4F1155J; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6619; geoSampleAccession=GSM849361; labExpId=CTig10011; bioRep=028N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapPlusRawRep4; type=bigWig; md5sum=71787e0bf079b35c590f8b4bd5437162; size=23M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapPlusSignalRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2382; geoSampleAccession=GSM849361; labExpId=K09; bioRep=027N; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekNucleusPapPlusSignalRep3; type=bigWig; md5sum=94507040dc098a73dac79897197dab11; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; replicate=3; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2382; geoSampleAccession=GSM849361; labExpId=K09; bioRep=027N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=ac5894359b16f3731a144ac0457aec50; size=831M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapRawDataRep4.fastq.tgz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEK; sex=F; localization=nucleus; rnaExtract=longPolyA; readType=1x36; replicate=4; donorId=4F1155J; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2012-03-29; dateUnrestricted=2012-12-29; subId=6458; geoSampleAccession=GSM849361; labExpId=CTig10011; bioRep=028N; seqPlatform=Illumina_GA2x; type=fastq; md5sum=9ce38385515dc5a85038e041ca585326; size=865M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4529; geoSampleAccession=GSM849361; labExpId=K09; bioRep=027N; seqPlatform=Illumina_GA2x; type=gtf; md5sum=a4359018a31ea1259a6fad197a869d8c; size=2.8M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapTssHmmV2.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEK; localization=nucleus; rnaExtract=longPolyA; submittedDataVersion=V2 - Filtered out the off end of chromosome reads; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001154; dateSubmitted=2011-12-09; dateUnrestricted=2012-09-09; subId=5147; geoSampleAccession=GSM849361; labExpId=K09; bioRep=027N; labVersion=IDR; seqPlatform=Illumina_GA2x; type=bedRnaElements; md5sum=c6bc27fcd20b5adbf1c3c5ff105b2cd9; size=5.8M; replicate=3; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhekNucleusPapTssHmmV3.bedRnaElements.gz seqPlatform=Illumina_GA2x; composite=wgEncodeRikenCage; readType=1x36; dataType=Cage; project=wgEncode; dateSubmitted=2012-07-24; dataVersion=ENCODE Jul 2012 Freeze; md5sum=753e2ccd54a46e58196020fac9d71f9b; dateUnrestricted=2013-04-24; size=1.6M; dccAccession=wgEncodeEH001154; replicate=3,4; view=TssHmm; labExpId=K09,CTig10011; submittedDataVersion=V3 - New sample is merged for replicates; tableName=wgEncodeRikenCageNhekNucleusPapTssHmmV3; subId=7560; cell=NHEK; rnaExtract=longPolyA; geoSampleAccession=GSM849361; sex=F; donorId=4F1155J; bioRep=027N,028N; lab=RIKEN; type=bedRnaElements; localization=nucleus; grant=Gingeras; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6665; labExpId=CThi10102CTT; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapAlnRep1; type=bam; md5sum=dd975f8815afa89508afea099a13ad7a; size=588M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6665; labExpId=CThi10102CTT; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapAlnRep1; type=bai; md5sum=42ed789e3f98e00c15c6558b5450df9f; size=3.9M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6701; labExpId=CThi10055; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapAlnRep2; type=bam; md5sum=c959efbe0f54573033c8dceb6897d543; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6701; labExpId=CThi10055; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapAlnRep2; type=bai; md5sum=ac55fbdc39b8ece4cf9d598a3be0874a; size=3.7M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6603; geoSampleAccession=GSM979663; labExpId=CThi10102CTT; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapMinusRawRep1; type=bigWig; md5sum=4384d883fb483dbec211fded03b6678a; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6638; geoSampleAccession=GSM979663; labExpId=CThi10055; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapMinusRawRep2; type=bigWig; md5sum=29c71f67eabfafc3c453000e41153133; size=9.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6603; geoSampleAccession=GSM979663; labExpId=CThi10102CTT; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapPlusRawRep1; type=bigWig; md5sum=46bc700d8a101f5e4dd1636a76be8fa4; size=12M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6638; geoSampleAccession=GSM979663; labExpId=CThi10055; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapPlusRawRep2; type=bigWig; md5sum=92ea6620594069e929cc461b23a73c7c; size=8.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6441; geoSampleAccession=GSM979663; labExpId=CThi10102CTT; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=292f9de2ccf12cbc99259b965b9963ec; size=891M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6477; geoSampleAccession=GSM979663; labExpId=CThi10055; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4a2816adb4bd9b3e3581ddca2e04de71; size=3.2G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemfm2CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6713; geoSampleAccession=GSM979663; labExpId=CThi10102CTT,CThi10055; bioRep=081WC,082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapTssHmm; type=bedRnaElements; md5sum=04bc7b8653648a4d0321c90876d67505; size=1.7M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6708; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep1; type=bam; md5sum=ae918db6511e43f591df076f312f49ae; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6708; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep1; type=bai; md5sum=2d3be8a5f415d28e52fe88b682bfafe5; size=4.1M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6654; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep2; type=bam; md5sum=0767dbdff31cf0fab83385858214411d; size=997M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6654; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep2; type=bai; md5sum=452776aa5dd2c38c26a8347836578918; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6646; geoSampleAccession=GSM979649; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapMinusRawRep1; type=bigWig; md5sum=8a27c5f5c4281c88a9b8b2299b846fb3; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6592; geoSampleAccession=GSM979649; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapMinusRawRep2; type=bigWig; md5sum=e6daea64e9383b534cefae2f2d0d1e81; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6646; geoSampleAccession=GSM979649; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapPlusRawRep1; type=bigWig; md5sum=de44e6317874b1926943c8d037f9e4d9; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6592; geoSampleAccession=GSM979649; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapPlusRawRep2; type=bigWig; md5sum=24299f7c340356dd3fbeb95cc677b587; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6485; geoSampleAccession=GSM979649; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=664198af214886cb91fb346cef8f151d; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6431; geoSampleAccession=GSM979649; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f80926a3d4112090861fc77173bb225e; size=1.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageNhemm2CellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6743; geoSampleAccession=GSM979649; labExpId=CThi10056,CThi10102GAT; bioRep=083WC,084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapTssHmm; type=bedRnaElements; md5sum=d1a323a4b8f419721d401ec71c5618e3; size=2.2M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageProstateCellPamAln.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; labExpId=I09; bioRep=gen0159WC; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageProstateCellPamAln; type=bam; md5sum=1d926e84501daaf20f7cde1c46108b77; size=625M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageProstateCellPamAln.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; labExpId=I09; bioRep=gen0159WC; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageProstateCellPamAln; type=bai; md5sum=014c00e373ac850d626e74af1997afce; size=5.6M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageProstateCellPamMinusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageProstateCellPamMinusSignal; type=bigWig; md5sum=78471d5d5a867cd1642a09261f239926; size=17M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageProstateCellPamPlusSignal.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageProstateCellPamPlusSignal; type=bigWig; md5sum=5e23eeff74cfa82ed6bfcbcda7eb02c4; size=17M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageProstateCellPamRawData.csfasta.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; type=csfasta; md5sum=9902b82d88eba04a6e257fb58fd6cd36; size=340M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageProstateCellPamRawData2.csqual.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData2; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; type=csqual; md5sum=ba14c8e25c45e02d92d4ae9705dd4669; size=758M; replicate=N/A; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6669; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep1; type=bam; md5sum=b8f668de1bae74a6f04db7eb810abd51; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6669; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep1; type=bai; md5sum=048870092514ce709b9a6ec277c9b35c; size=4.2M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6659; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep2; type=bam; md5sum=c96c5c3ad06556b68e18136080c088c2; size=1.8G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6659; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep2; type=bai; md5sum=5e6466a7ddfa44b15808891afc3c6f6f; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6606; geoSampleAccession=GSM979653; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapMinusRawRep1; type=bigWig; md5sum=fbda9553d7cd84a2037e1fc4efe60ed2; size=17M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapMinusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6599; geoSampleAccession=GSM979653; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapMinusRawRep2; type=bigWig; md5sum=259aad4e44798a0219472cc2a2dc9db7; size=18M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6606; geoSampleAccession=GSM979653; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapPlusRawRep1; type=bigWig; md5sum=77f4a41730e40a72cc94b108d4aa84d2; size=20M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapPlusRawRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6599; geoSampleAccession=GSM979653; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapPlusRawRep2; type=bigWig; md5sum=f73c49e37a8d58060c000ad440eb46bd; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6446; geoSampleAccession=GSM979653; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2e86d7546804759d5105ce1d9deb9bc6; size=2.5G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6435; geoSampleAccession=GSM979653; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=7bc5587bcdd437ed5562fe89d9ece389; size=2.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSkmcCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6732; geoSampleAccession=GSM979653; labExpId=CThi10030,CThi10031; bioRep=047WC,048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapTssHmm; type=bedRnaElements; md5sum=c87de368abf9533f40ea230bb6b504f7; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6660; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep3; type=bam; md5sum=7be510bc3ee8df879967caff196e31f0; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6660; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep3; type=bai; md5sum=342efb20e882d2d239f174028a49e3dc; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6692; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep4; type=bam; md5sum=0f9a4d2dbb049af17b4f056c064f4e4b; size=1.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6692; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep4; type=bai; md5sum=b1ba9fb0797167564cafcf3560763c8f; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6598; geoSampleAccession=GSM979646; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapMinusRawRep3; type=bigWig; md5sum=00abbedf7b3eef7b8afb48d5f7a02b52; size=31M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6632; geoSampleAccession=GSM979646; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapMinusRawRep4; type=bigWig; md5sum=738025f00849434c3c10e107e7d18b4c; size=28M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6598; geoSampleAccession=GSM979646; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapPlusRawRep3; type=bigWig; md5sum=a1f2226f7a17ed6d313fb29a0012994e; size=36M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6632; geoSampleAccession=GSM979646; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapPlusRawRep4; type=bigWig; md5sum=f5ec03882d8cd9cb223795fd742aff53; size=32M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6437; geoSampleAccession=GSM979646; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cb0927c3582e38f1c26fde7f99f4f9d5; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6470; geoSampleAccession=GSM979646; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a74cb3a0b4d4340baf2b5f18f3267437; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6717; geoSampleAccession=GSM979646; labExpId=CThi10043,CThi10046; bioRep=085WC,086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapTssHmm; type=bedRnaElements; md5sum=bddbb755005f8023321aac770a03d6da; size=5.8M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6677; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep3; type=bam; md5sum=546680e2c14240eae469fd0b54ffe65a; size=1.4G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6677; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep3; type=bai; md5sum=b1ae519e91a76cd731ef0173b3b21d3e; size=4.4M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6652; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep4; type=bam; md5sum=2246fe28882f890a8eeb799da4f27461; size=1.6G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6652; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep4; type=bai; md5sum=8e48b3f650a647779cc5368f3acfb05a; size=4.3M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6615; geoSampleAccession=GSM979648; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapMinusRawRep3; type=bigWig; md5sum=c445e724eb436bae5eeeb527ff2e239f; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6590; geoSampleAccession=GSM979648; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapMinusRawRep4; type=bigWig; md5sum=947b8b462328a6f0876d9b052ee5c05a; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6615; geoSampleAccession=GSM979648; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapPlusRawRep3; type=bigWig; md5sum=844d0fea8302adb66f406df0f35f0cb1; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6590; geoSampleAccession=GSM979648; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapPlusRawRep4; type=bigWig; md5sum=1f8707a8f51ace83ff564bcc7945cdf6; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6453; geoSampleAccession=GSM979648; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=e9ef5a17836cca98aa8fba2cb63e95bd; size=2.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6429; geoSampleAccession=GSM979648; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=76895e3e2960262ebb6ced908cad1955; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshCytosolPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6734; geoSampleAccession=GSM979648; labExpId=CThi10044,CThi10047; bioRep=085C,086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapTssHmm; type=bedRnaElements; md5sum=ef26aeb224dab37910b554481158714c; size=4.7M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapAlnRep3.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6675; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep3; type=bam; md5sum=13b0f544a005bfb6142984162c88a658; size=2.0G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapAlnRep3.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6675; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep3; type=bai; md5sum=ebd59d8a52be4ede62a8f6307b783a04; size=5.6M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapAlnRep4.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6661; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep4; type=bam; md5sum=4af03165898212fb069b0d437682e659; size=1.9G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapAlnRep4.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6661; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep4; type=bai; md5sum=3083e871ff6f1e9c699168482d5d8d4e; size=5.5M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapMinusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6613; geoSampleAccession=GSM979647; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapMinusRawRep3; type=bigWig; md5sum=4aaf542b41cb9248b74d89fa2faf3b29; size=63M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapMinusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6597; geoSampleAccession=GSM979647; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapMinusRawRep4; type=bigWig; md5sum=2e2b660af8a977c608b509425132d753; size=55M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapPlusRawRep3.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6613; geoSampleAccession=GSM979647; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapPlusRawRep3; type=bigWig; md5sum=9c16360249d4a46bca6bce97cf955152; size=57M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapPlusRawRep4.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6597; geoSampleAccession=GSM979647; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapPlusRawRep4; type=bigWig; md5sum=08a0ba346c287ab6d809c5ab18c2b824; size=50M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapRawDataRep3.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6451; geoSampleAccession=GSM979647; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=34f55979297e318b2273d16db8aa897b; size=3.1G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapRawDataRep4.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6438; geoSampleAccession=GSM979647; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=8a87541d09f4b9fbd13e381469b57562; size=2.7G; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshNucleusPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6727; geoSampleAccession=GSM979647; labExpId=CThi10045,CThi10048; bioRep=085N,086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapTssHmm; type=bedRnaElements; md5sum=146b4db17d96e77f46846daa198a0d4c; size=8.4M; replicate=3,4; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapAlnRep1.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3423; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep1; type=bam; md5sum=dd157c5757c5e85f4c7854089a09bbf2; size=426M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapAlnRep1.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3423; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep1; type=bai; md5sum=deddd10a9ea249479aeb5a26a201c111; size=5.0M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapAlnRep2.bam project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep2; type=bam; md5sum=e0edada032843539e6d28574d4a0f766; size=367M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapAlnRep2.bam.bai project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep2; type=bai; md5sum=e3148691af40a89746f4b3d7abc54707; size=4.8M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapMinusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-05-31; dateUnrestricted=2012-03-02; subId=4167; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapMinusRawRep1; type=bigWig; md5sum=c7d6b31c2be98961fbe5f56b1cdcdeff; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapMinusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapMinusSignalRep2; type=bigWig; md5sum=49c53bb840d8c3f0b5f081f7f0e86ddc; size=63M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapPlusRawRep1.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-05-31; dateUnrestricted=2012-03-02; subId=4167; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapPlusRawRep1; type=bigWig; md5sum=aba33e70ca776b71c380a163f692c867; size=11M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapPlusSignalRep2.bigWig project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapPlusSignalRep2; type=bigWig; md5sum=19083c96c5056b16a4345fb333e68b2a; size=65M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapRawDataRep1.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3423; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=32f189b19f433b49d0c7179945493373; size=513M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapRawDataRep2.fastq.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=2a25a6a95dc0aff867be7c50bd8ecded; size=454M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapTssGencV7.gtf.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4524; geoSampleAccession=GSM849362; labExpId=K14,K15; bioRep=019WC,020WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=5cfcfa3ed99060207aa475c2e0db341d; size=3.1M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRikenCage/releaseLatest/wgEncodeRikenCageSknshraCellPapTssHmm.bedRnaElements.gz project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849362; labExpId=K14,K15; bioRep=019WC,020WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapTssHmm; type=bedRnaElements; md5sum=74a76af62ea7f81ecbb2503d9b3e61c9; size=1.9M; replicate=1,2; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayA549SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=A549; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000823; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651560; tableName=wgEncodeUwAffyExonArrayA549SimpleSignalRep1; type=broadPeak; md5sum=f422ac43b37031a46c2acade09860afe; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayA549SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=A549; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000823; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651561; tableName=wgEncodeUwAffyExonArrayA549SimpleSignalRep2; type=broadPeak; md5sum=7e2b608ccaffdc32d0e9df4654fe9a40; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg04449SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG04449; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000375; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510528; tableName=wgEncodeUwAffyExonArrayAg04449SimpleSignalRep1; type=broadPeak; md5sum=1e97768c2c1d98d1aa6c063093cbbe23; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg04449SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG04449; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000375; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510530; tableName=wgEncodeUwAffyExonArrayAg04449SimpleSignalRep2; type=broadPeak; md5sum=53f6be35393403859ed3e6075906f88e; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg04450SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG04450; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000376; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510532; tableName=wgEncodeUwAffyExonArrayAg04450SimpleSignalRep1; type=broadPeak; md5sum=9a18896ec8b1b1e6fcbbdb00be691849; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg04450SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG04450; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000376; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510534; tableName=wgEncodeUwAffyExonArrayAg04450SimpleSignalRep2; type=broadPeak; md5sum=b9e7d0ef1205142f793bd992d90aef97; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg09309SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG09309; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000377; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510522; tableName=wgEncodeUwAffyExonArrayAg09309SimpleSignalRep1; type=broadPeak; md5sum=b02261b8b4e57b60edf54bf6371ed555; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg09309SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG09309; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000377; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2110; geoSampleAccession=GSM510525; tableName=wgEncodeUwAffyExonArrayAg09309SimpleSignalRep2; type=broadPeak; md5sum=9f899b9e692216384064c26801484126; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg09319SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG09319; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000378; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510536; tableName=wgEncodeUwAffyExonArrayAg09319SimpleSignalRep1; type=broadPeak; md5sum=26f78b438499e1970fed87cb690f4972; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg09319SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG09319; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000378; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510538; tableName=wgEncodeUwAffyExonArrayAg09319SimpleSignalRep2; type=broadPeak; md5sum=d5e12edb70ca453569c98b72b63476c7; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg10803SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG10803; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000379; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510520; tableName=wgEncodeUwAffyExonArrayAg10803SimpleSignalRep1; type=broadPeak; md5sum=3f3fc9eda121cd2fa61abeba352e7581; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAg10803SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AG10803; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000379; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510521; tableName=wgEncodeUwAffyExonArrayAg10803SimpleSignalRep2; type=broadPeak; md5sum=436a0c20087f99ea6793b1065b3e2a99; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAoafSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AoAF; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000801; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580029; tableName=wgEncodeUwAffyExonArrayAoafSimpleSignalRep1; type=broadPeak; md5sum=6d31aef3661318faa728ebc91389ee07; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayAoafSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=AoAF; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000801; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580030; tableName=wgEncodeUwAffyExonArrayAoafSimpleSignalRep2; type=broadPeak; md5sum=21045807d35a71a7395ec37581d213e5; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayBe2cSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=BE2_C; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000824; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651567; tableName=wgEncodeUwAffyExonArrayBe2cSimpleSignalRep1; type=broadPeak; md5sum=ecccaa938905fe348c27dff8e21e2578; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayBe2cSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=BE2_C; replicate=2; submittedDataVersion=V2 - lab labeling error; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000824; dateSubmitted=2011-03-10; dateUnrestricted=2011-12-10; subId=3816; geoSampleAccession=GSM651568; tableName=wgEncodeUwAffyExonArrayBe2cSimpleSignalRep2; type=broadPeak; md5sum=087642d33dd99c11c5e14396b754ac06; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayBjSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=BJ; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000365; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472924; tableName=wgEncodeUwAffyExonArrayBjSimpleSignalRep1; type=broadPeak; md5sum=c848980bd1931e60df3eda7c181ca012; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayBjSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=BJ; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000365; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472925; tableName=wgEncodeUwAffyExonArrayBjSimpleSignalRep2; type=broadPeak; md5sum=b0a0d7d31ae04e50bbdb598f2d2fc6c0; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayCaco2SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=Caco-2; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000359; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472900; tableName=wgEncodeUwAffyExonArrayCaco2SimpleSignalRep1; type=broadPeak; md5sum=71566bcbfc5a994698bab7240035839f; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayCaco2SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=Caco-2; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000359; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472933; tableName=wgEncodeUwAffyExonArrayCaco2SimpleSignalRep2; type=broadPeak; md5sum=9e8fef78a3d5cd1f522e3b27a589d13b; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayCmkSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=CMK; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000380; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510583; tableName=wgEncodeUwAffyExonArrayCmkSimpleSignalRep1; type=broadPeak; md5sum=f74c05f7a1258ab17f97bfbdf1121663; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayGm06990SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=GM06990; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000360; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472903; tableName=wgEncodeUwAffyExonArrayGm06990SimpleSignalRep1; type=broadPeak; md5sum=0f527d08fe85af98acab86e4ea2d05d3; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayGm06990SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=GM06990; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000360; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472904; tableName=wgEncodeUwAffyExonArrayGm06990SimpleSignalRep2; type=broadPeak; md5sum=c569ff2d2c9b7e07232cda2335c0e71b; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayGm12864SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=GM12864; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002150; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824872; labExpId=DS12431; tableName=wgEncodeUwAffyExonArrayGm12864SimpleSignalRep1; type=broadPeak; md5sum=1a126534886a4e299b4aacbc1375c7c9; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayGm12865SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=GM12865; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002151; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824873; labExpId=DS12436; tableName=wgEncodeUwAffyExonArrayGm12865SimpleSignalRep1; type=broadPeak; md5sum=1cba623a796921265a7b264cdd459dde; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayGm12865SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=GM12865; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002151; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824874; labExpId=DS12442; tableName=wgEncodeUwAffyExonArrayGm12865SimpleSignalRep2; type=broadPeak; md5sum=61aa6f6685513b587fb357066f6850ba; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayGm12878SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=GM12878; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000366; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472931; tableName=wgEncodeUwAffyExonArrayGm12878SimpleSignalRep1; type=broadPeak; md5sum=f6a2c97c200a4cafe4db7986258f6db5; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa14dRawDataRep1.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_14d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003048; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033351; labExpId=DS15446; type=CEL; md5sum=9d265d40161432b111c42c0f3be2a5ca; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa14dRawDataRep2.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_14d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003048; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033350; labExpId=RS16723; type=CEL; md5sum=cede6fd95d6114802accc548c7c84c85; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa14dSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_14d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003048; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033351; labExpId=DS15446; tableName=wgEncodeUwAffyExonArrayH7esDiffa14dSimpleSignalRep1; type=broadPeak; md5sum=ee7d0fc50985c45840d9e17ecbdb00a2; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa14dSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_14d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003048; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033350; labExpId=RS16723; tableName=wgEncodeUwAffyExonArrayH7esDiffa14dSimpleSignalRep2; type=broadPeak; md5sum=3e9281988d84116a5b33892033005df9; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa2dRawDataRep1.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_2d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003049; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033353; labExpId=DS15447; type=CEL; md5sum=719456c5f4fae380b33d6b0b1feab552; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa2dRawDataRep2.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_2d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003049; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033352; labExpId=RS16720; type=CEL; md5sum=01d9502455fa936bac975d4bcfbf2fa6; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa2dSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_2d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003049; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033353; labExpId=DS15447; tableName=wgEncodeUwAffyExonArrayH7esDiffa2dSimpleSignalRep1; type=broadPeak; md5sum=b1e178aec173bbdc001a8a9b220b6db9; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa2dSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_2d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003049; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033352; labExpId=RS16720; tableName=wgEncodeUwAffyExonArrayH7esDiffa2dSimpleSignalRep2; type=broadPeak; md5sum=4027e1874297797eda1348fe846f0a0d; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa5dRawDataRep1.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_5d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003050; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033346; labExpId=DS15444; type=CEL; md5sum=3cd18b8451ac590a7fc10525dcb7550e; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa5dRawDataRep2.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_5d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003050; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033347; labExpId=RS16721; type=CEL; md5sum=489014cbdfc784d942aa02da13f3b9e6; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa5dSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_5d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003050; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033346; labExpId=DS15444; tableName=wgEncodeUwAffyExonArrayH7esDiffa5dSimpleSignalRep1; type=broadPeak; md5sum=cb63e5b38c21184ced564ec6a71277d5; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa5dSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_5d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003050; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033347; labExpId=RS16721; tableName=wgEncodeUwAffyExonArrayH7esDiffa5dSimpleSignalRep2; type=broadPeak; md5sum=7bf5674b8e511805059ba305527cec9e; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa9dRawDataRep1.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_9d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003051; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033348; labExpId=DS15445; type=CEL; md5sum=e54eaa39b324ff190cd9af3a870b8d3f; size=25M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa9dRawDataRep2.CEL.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=RawData; cell=H7-hESC; treatment=diffProtA_9d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003051; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033349; labExpId=RS16722; type=CEL; md5sum=74a1c826cb9e311967950a5e4d3e115f; size=26M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa9dSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_9d; replicate=1; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003051; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033348; labExpId=DS15445; tableName=wgEncodeUwAffyExonArrayH7esDiffa9dSimpleSignalRep1; type=broadPeak; md5sum=e2d20870ef98ae763b6fb142323dc498; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esDiffa9dSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; treatment=diffProtA_9d; replicate=2; dataVersion=ENCODE Jul 2012 Freeze; dccAccession=wgEncodeEH003051; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; subId=7725; geoSampleAccession=GSM1033349; labExpId=RS16722; tableName=wgEncodeUwAffyExonArrayH7esDiffa9dSimpleSignalRep2; type=broadPeak; md5sum=6dbd46e4a44d1650d613b4c61690dbcc; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000381; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510581; tableName=wgEncodeUwAffyExonArrayH7esSimpleSignalRep1; type=broadPeak; md5sum=ab74cf651393272f5a326fb451534baa; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayH7esSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=H7-hESC; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000381; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580005; tableName=wgEncodeUwAffyExonArrayH7esSimpleSignalRep2; type=broadPeak; md5sum=d6d48bffbc7d1128c0638e36c7c129e6; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHacSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HAc; replicate=1; submittedDataVersion=V2 - lab labeling error; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000831; dateSubmitted=2011-03-10; dateUnrestricted=2011-12-10; subId=3816; geoSampleAccession=GSM651569; tableName=wgEncodeUwAffyExonArrayHacSimpleSignalRep1; type=broadPeak; md5sum=bdf64ce82b7105e9aa65177c8855b58e; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHacSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HAc; replicate=2; submittedDataVersion=V2 - lab labeling error; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000831; dateSubmitted=2011-03-10; dateUnrestricted=2011-12-10; subId=3816; geoSampleAccession=GSM651570; tableName=wgEncodeUwAffyExonArrayHacSimpleSignalRep2; type=broadPeak; md5sum=3eee4fd337b2b46dce420dc92dbb2ab4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHaeSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HAEpiC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000382; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510516; tableName=wgEncodeUwAffyExonArrayHaeSimpleSignalRep1; type=broadPeak; md5sum=a1afdf111aa408123468c36d073cf7d9; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHaeSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HAEpiC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000382; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510517; tableName=wgEncodeUwAffyExonArrayHaeSimpleSignalRep2; type=broadPeak; md5sum=37ff606a0e232360d0e0affea9e88b83; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHahSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HA-h; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002152; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824862; labExpId=RS17565; tableName=wgEncodeUwAffyExonArrayHahSimpleSignalRep1; type=broadPeak; md5sum=e6d09e1814f39dba49f50e810c875cf9; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHahSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HA-h; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002152; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824863; labExpId=RS17566; tableName=wgEncodeUwAffyExonArrayHahSimpleSignalRep2; type=broadPeak; md5sum=528f18681f7ba2c32e86841f2a05234d; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHaspSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HA-sp; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000825; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651562; tableName=wgEncodeUwAffyExonArrayHaspSimpleSignalRep1; type=broadPeak; md5sum=35537d7b5e28b8e6fd53bd70cb06f48a; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHaspSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HA-sp; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000825; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651563; tableName=wgEncodeUwAffyExonArrayHaspSimpleSignalRep2; type=broadPeak; md5sum=063b1579a9ee1b7bbd8a324eafe844dd; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHbmecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HBMEC; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000802; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580045; tableName=wgEncodeUwAffyExonArrayHbmecSimpleSignalRep1; type=broadPeak; md5sum=80e715f221c0c4a1e67f709e6d27885b; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHbmecSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HBMEC; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000802; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651564; tableName=wgEncodeUwAffyExonArrayHbmecSimpleSignalRep2; type=broadPeak; md5sum=a0585e4686e53c2712abd7be69f0efc0; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHbvpSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HBVP; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002153; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824859; labExpId=RS18997; tableName=wgEncodeUwAffyExonArrayHbvpSimpleSignalRep1; type=broadPeak; md5sum=7771acc4c15527ebf16887bbb3378866; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHbvsmcSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HBVSMC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002154; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5009; geoSampleAccession=GSM824849; labExpId=RS18998; tableName=wgEncodeUwAffyExonArrayHbvsmcSimpleSignalRep1; type=broadPeak; md5sum=d1b5cf302faf1a624c15cb7ba4cd033a; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHbvsmcSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HBVSMC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002154; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824850; labExpId=RS18999; tableName=wgEncodeUwAffyExonArrayHbvsmcSimpleSignalRep2; type=broadPeak; md5sum=10fe54c0309628c64ecb3ad712bfef13; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCF; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000383; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510542; tableName=wgEncodeUwAffyExonArrayHcfSimpleSignalRep1; type=broadPeak; md5sum=090fbcbb166d5c7fc9f9654479318120; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCF; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000383; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510545; tableName=wgEncodeUwAffyExonArrayHcfSimpleSignalRep2; type=broadPeak; md5sum=dc525f294d268d95159a7e15ff332b13; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcfaaSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCFaa; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000803; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580031; tableName=wgEncodeUwAffyExonArrayHcfaaSimpleSignalRep1; type=broadPeak; md5sum=cfa1b290f6f6375eea64799b45211850; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcfaaSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCFaa; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000803; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580032; tableName=wgEncodeUwAffyExonArrayHcfaaSimpleSignalRep2; type=broadPeak; md5sum=6f19b53d19b9c39ae3b25c22eeb81740; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcmSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCM; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000384; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510566; tableName=wgEncodeUwAffyExonArrayHcmSimpleSignalRep1; type=broadPeak; md5sum=38961d6ae845ea7c9fa002ec67e230b1; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcmSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCM; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000384; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510569; tableName=wgEncodeUwAffyExonArrayHcmSimpleSignalRep2; type=broadPeak; md5sum=824fba35b2c6bebaa64cb8169b986ed9; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHconfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HConF; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000805; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580007; tableName=wgEncodeUwAffyExonArrayHconfSimpleSignalRep1; type=broadPeak; md5sum=3b0f941ffc438f8b2167336dda312de4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHconfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HConF; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000805; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580008; tableName=wgEncodeUwAffyExonArrayHconfSimpleSignalRep2; type=broadPeak; md5sum=9b2b171c14dc909d9a3dc40208e3a2b4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcpeSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCPEpiC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000385; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510547; tableName=wgEncodeUwAffyExonArrayHcpeSimpleSignalRep1; type=broadPeak; md5sum=9e39e166d0ed530a5eb27367d1bdd074; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHcpeSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCPEpiC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000385; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510551; tableName=wgEncodeUwAffyExonArrayHcpeSimpleSignalRep2; type=broadPeak; md5sum=8ce5b2b49790cf403093ad5306bd7671; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHct116SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCT-116; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000804; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580039; tableName=wgEncodeUwAffyExonArrayHct116SimpleSignalRep1; type=broadPeak; md5sum=a3aa81a3ee179d5f13a8c8d1d9158cc5; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHct116SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HCT-116; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000804; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580040; tableName=wgEncodeUwAffyExonArrayHct116SimpleSignalRep2; type=broadPeak; md5sum=63b64086a3772b3f99b53f4dabfdec99; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHeeSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HEEpiC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000386; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510571; tableName=wgEncodeUwAffyExonArrayHeeSimpleSignalRep1; type=broadPeak; md5sum=8329c8eb8e686c2b010eb20de6a23db5; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHeeSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HEEpiC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000386; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510574; tableName=wgEncodeUwAffyExonArrayHeeSimpleSignalRep2; type=broadPeak; md5sum=002b7e958afc2a261804ef05ecacb0ab; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHek293SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HEK293; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000806; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580027; tableName=wgEncodeUwAffyExonArrayHek293SimpleSignalRep1; type=broadPeak; md5sum=7449cb9a95da92a47efa5928190ebfe5; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHek293SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HEK293; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000806; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580028; tableName=wgEncodeUwAffyExonArrayHek293SimpleSignalRep2; type=broadPeak; md5sum=9104b2ca3d4331488af92090990d3970; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHelas3SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HeLa-S3; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000357; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472916; tableName=wgEncodeUwAffyExonArrayHelas3SimpleSignalRep1; type=broadPeak; md5sum=8f78564ee13cac5b9a342886df43cc29; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHelas3SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HeLa-S3; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000357; dateSubmitted=2009-06-29; dateResubmitted=2010-08-19; dateUnrestricted=2010-03-29; subId=2110; geoSampleAccession=GSM472932; tableName=wgEncodeUwAffyExonArrayHelas3SimpleSignalRep2; type=broadPeak; md5sum=077e602d860e397b3dbfaed1c2a7af02; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHepg2SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HepG2; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000361; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472906; tableName=wgEncodeUwAffyExonArrayHepg2SimpleSignalRep1; type=broadPeak; md5sum=fd936dd132c7139eb7a9575904dfb4b3; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHepg2SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HepG2; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000361; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472907; tableName=wgEncodeUwAffyExonArrayHepg2SimpleSignalRep2; type=broadPeak; md5sum=9837ed5823a6a51deff80bc9e5364ec6; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHffSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HFF; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002155; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824864; labExpId=RS17567; tableName=wgEncodeUwAffyExonArrayHffSimpleSignalRep1; type=broadPeak; md5sum=7d3ba42a57e6f998b0e46c925b5331eb; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHffSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HFF; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002155; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824865; labExpId=RS17568; tableName=wgEncodeUwAffyExonArrayHffSimpleSignalRep2; type=broadPeak; md5sum=b6367088c953dca00d42899688811c55; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHffmycSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HFF-Myc; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002156; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824866; labExpId=RS17569; tableName=wgEncodeUwAffyExonArrayHffmycSimpleSignalRep1; type=broadPeak; md5sum=6f5f187d37cb7e5bdba645075b1ec548; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHffmycSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HFF-Myc; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002156; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824867; labExpId=RS17570; tableName=wgEncodeUwAffyExonArrayHffmycSimpleSignalRep2; type=broadPeak; md5sum=606a8575029b2cb40d4680f0af5ffaaf; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHgfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HGF; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000807; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2110; geoSampleAccession=GSM472940; tableName=wgEncodeUwAffyExonArrayHgfSimpleSignalRep1; type=broadPeak; md5sum=dbcab31cebf86a51335972f372a1cdc7; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHgfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HGF; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000807; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2110; geoSampleAccession=GSM472941; tableName=wgEncodeUwAffyExonArrayHgfSimpleSignalRep2; type=broadPeak; md5sum=fde5c36e8fc342d0bc949a23093edfda; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHipeSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HIPEpiC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000387; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510518; tableName=wgEncodeUwAffyExonArrayHipeSimpleSignalRep1; type=broadPeak; md5sum=c6ef8bd704c692bbb8b800a6ad52ff07; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHipeSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HIPEpiC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000387; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510519; tableName=wgEncodeUwAffyExonArrayHipeSimpleSignalRep2; type=broadPeak; md5sum=0ce7738fa75cd16f35aef1318d2d9dd7; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHl60SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HL-60; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000808; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2110; geoSampleAccession=GSM472908; tableName=wgEncodeUwAffyExonArrayHl60SimpleSignalRep1; type=broadPeak; md5sum=e762c9610d9ac9ae5fdd54a16b54a860; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHl60SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HL-60; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000808; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2110; geoSampleAccession=GSM472942; tableName=wgEncodeUwAffyExonArrayHl60SimpleSignalRep2; type=broadPeak; md5sum=3b823d22877a6f0ff9ca9a17cda81c8e; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMEC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000367; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472934; tableName=wgEncodeUwAffyExonArrayHmecSimpleSignalRep1; type=broadPeak; md5sum=790f3e07e1c037482bee71a4d1f98f14; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmecSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMEC; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000367; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580006; tableName=wgEncodeUwAffyExonArrayHmecSimpleSignalRep2; type=broadPeak; md5sum=423eff1cad1e85e47eb8b33ff7dd1420; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMF; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000809; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580041; tableName=wgEncodeUwAffyExonArrayHmfSimpleSignalRep1; type=broadPeak; md5sum=d9b73a5254e8fccb03b862be4d679f32; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMF; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000809; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580042; tableName=wgEncodeUwAffyExonArrayHmfSimpleSignalRep2; type=broadPeak; md5sum=6ea599fa15b7b128d8cb9d423988ac02; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdadSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dAd; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002157; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824851; labExpId=RS19000; tableName=wgEncodeUwAffyExonArrayHmvecdadSimpleSignalRep1; type=broadPeak; md5sum=2f923e31278527ac6f7900cf922a9d1b; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdadSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dAd; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002157; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824852; labExpId=RS19001; tableName=wgEncodeUwAffyExonArrayHmvecdadSimpleSignalRep2; type=broadPeak; md5sum=8a7737e25cbbf4fbeb5169b198b8185a; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdbladSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dBl-Ad; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000812; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580021; tableName=wgEncodeUwAffyExonArrayHmvecdbladSimpleSignalRep1; type=broadPeak; md5sum=8b05c1426cfdc1e36b9304ac1b29313d; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdbladSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dBl-Ad; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000812; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580022; tableName=wgEncodeUwAffyExonArrayHmvecdbladSimpleSignalRep2; type=broadPeak; md5sum=679d99001c42ff2ff7b7c50f39e2881d; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdblneoSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dBl-Neo; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000813; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580023; tableName=wgEncodeUwAffyExonArrayHmvecdblneoSimpleSignalRep1; type=broadPeak; md5sum=47bd884b457f28472d2d2aa210f5d7b8; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdblneoSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dBl-Neo; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000813; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580024; tableName=wgEncodeUwAffyExonArrayHmvecdblneoSimpleSignalRep2; type=broadPeak; md5sum=52e31f6f67410853b223419a7e782cd2; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdlyadSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dLy-Ad; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000814; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580014; tableName=wgEncodeUwAffyExonArrayHmvecdlyadSimpleSignalRep1; type=broadPeak; md5sum=3e15efa88c558d1d2c49086ea01fe394; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdlyadSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dLy-Ad; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000814; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580013; tableName=wgEncodeUwAffyExonArrayHmvecdlyadSimpleSignalRep2; type=broadPeak; md5sum=ee2f0ee61e9c8945f81c49881e9fde5d; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdlyneoSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dLy-Neo; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000815; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580011; tableName=wgEncodeUwAffyExonArrayHmvecdlyneoSimpleSignalRep1; type=broadPeak; md5sum=ca5d2996a8df43c22b0bbd1b193f58ad; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdlyneoSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dLy-Neo; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000815; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580012; tableName=wgEncodeUwAffyExonArrayHmvecdlyneoSimpleSignalRep2; type=broadPeak; md5sum=f6fec0e9884a78eae792f3794cbbe72e; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdneoSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dNeo; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000816; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580015; tableName=wgEncodeUwAffyExonArrayHmvecdneoSimpleSignalRep1; type=broadPeak; md5sum=239ecfc586be65d97d104b5a70c39be8; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecdneoSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-dNeo; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000816; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580016; tableName=wgEncodeUwAffyExonArrayHmvecdneoSimpleSignalRep2; type=broadPeak; md5sum=70bc72d16f7883fe2e86a62f341d0a82; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmveclblSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-LBl; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000810; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580019; tableName=wgEncodeUwAffyExonArrayHmveclblSimpleSignalRep1; type=broadPeak; md5sum=70af60326100d9f170cb5c3cd65dcef5; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmveclblSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-LBl; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000810; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580020; tableName=wgEncodeUwAffyExonArrayHmveclblSimpleSignalRep2; type=broadPeak; md5sum=149bdfa1e66b576a31b5127a5e3ad587; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecllySimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-LLy; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000811; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580009; tableName=wgEncodeUwAffyExonArrayHmvecllySimpleSignalRep1; type=broadPeak; md5sum=75bf38a8336542fc9dddfeb47aeec1e5; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHmvecllySimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HMVEC-LLy; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000811; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580010; tableName=wgEncodeUwAffyExonArrayHmvecllySimpleSignalRep2; type=broadPeak; md5sum=dacb8cba760ff2225eeb063b22d0f3cd; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHnpceSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HNPCEpiC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000388; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510560; tableName=wgEncodeUwAffyExonArrayHnpceSimpleSignalRep1; type=broadPeak; md5sum=20b94887a8bf813ce5b1011e2c2d88e6; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHnpceSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HNPCEpiC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000388; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510564; tableName=wgEncodeUwAffyExonArrayHnpceSimpleSignalRep2; type=broadPeak; md5sum=65da8d56057c9936d9db6e0d2fd48de4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHpaecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HPAEC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002158; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824860; labExpId=RS19002; tableName=wgEncodeUwAffyExonArrayHpaecSimpleSignalRep1; type=broadPeak; md5sum=b2e9149463e85bc0453a4e5b9fb8a66a; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHpafSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HPAF; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000817; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580033; tableName=wgEncodeUwAffyExonArrayHpafSimpleSignalRep1; type=broadPeak; md5sum=4b38d479ea0b6ac4ff2ebf41f3d7f4e5; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHpafSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HPAF; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000817; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580034; tableName=wgEncodeUwAffyExonArrayHpafSimpleSignalRep2; type=broadPeak; md5sum=363c4cb39186208cc7c63808f3419f1e; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHpdlfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HPdLF; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000819; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580025; tableName=wgEncodeUwAffyExonArrayHpdlfSimpleSignalRep1; type=broadPeak; md5sum=53c9f092d9cebae309c5b916febed028; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHpdlfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HPdLF; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000819; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580026; tableName=wgEncodeUwAffyExonArrayHpdlfSimpleSignalRep2; type=broadPeak; md5sum=cc4238bf69125bf80398242403c51a25; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHpfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HPF; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000818; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580035; tableName=wgEncodeUwAffyExonArrayHpfSimpleSignalRep1; type=broadPeak; md5sum=4a4344384ed5892a51c6c9287fc37204; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHpfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HPF; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000818; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580036; tableName=wgEncodeUwAffyExonArrayHpfSimpleSignalRep2; type=broadPeak; md5sum=d89fb5e2c53209ef3268afebd6abb1de; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHrceSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRCEpiC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000355; dateSubmitted=2009-06-29; dateResubmitted=2010-08-19; dateUnrestricted=2010-03-29; subId=2110; geoSampleAccession=GSM472920; tableName=wgEncodeUwAffyExonArrayHrceSimpleSignalRep1; type=broadPeak; md5sum=8668ad112cd8902d393ff7f7e38cab49; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHrceSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRCEpiC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000355; dateSubmitted=2009-06-29; dateResubmitted=2010-08-19; dateUnrestricted=2010-03-29; subId=2110; geoSampleAccession=GSM472921; tableName=wgEncodeUwAffyExonArrayHrceSimpleSignalRep2; type=broadPeak; md5sum=e605ddeb1fdbf3fe001f2487ff29cfb6; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHreSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRE; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000356; dateSubmitted=2009-06-29; dateResubmitted=2010-08-19; dateUnrestricted=2010-03-29; subId=2110; geoSampleAccession=GSM472919; tableName=wgEncodeUwAffyExonArrayHreSimpleSignalRep1; type=broadPeak; md5sum=a5910eb03089beb7e26ed32ffe43523e; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHreSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRE; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000356; dateSubmitted=2009-06-29; dateResubmitted=2010-08-19; dateUnrestricted=2010-03-29; subId=2110; geoSampleAccession=GSM472918; tableName=wgEncodeUwAffyExonArrayHreSimpleSignalRep2; type=broadPeak; md5sum=d6189242192e6b4812597fa0f5d04c09; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHrgecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRGEC; replicate=1; submittedDataVersion=V2 - lab labeling error; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000832; dateSubmitted=2011-03-10; dateUnrestricted=2011-12-10; subId=3816; geoSampleAccession=GSM651572; tableName=wgEncodeUwAffyExonArrayHrgecSimpleSignalRep1; type=broadPeak; md5sum=1e117debef3094e45d76bf5301595fa7; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHrgecSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRGEC; replicate=2; submittedDataVersion=V2 - lab labeling error; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000832; dateSubmitted=2011-03-10; dateUnrestricted=2011-12-10; subId=3816; geoSampleAccession=GSM651573; tableName=wgEncodeUwAffyExonArrayHrgecSimpleSignalRep2; type=broadPeak; md5sum=68574016f6f83a737bb30870adcdab48; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHrpeSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRPEpiC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000389; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510514; tableName=wgEncodeUwAffyExonArrayHrpeSimpleSignalRep1; type=broadPeak; md5sum=ee5a433882ba397ff51ed082a85d1f41; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHrpeSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HRPEpiC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000389; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510515; tableName=wgEncodeUwAffyExonArrayHrpeSimpleSignalRep2; type=broadPeak; md5sum=39b929add81f6dc5b2f6ba4e76cc3471; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHsmmSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HSMM; replicate=1; submittedDataVersion=V2 - lab labeling error; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000833; dateSubmitted=2011-03-10; dateUnrestricted=2011-12-10; subId=3816; geoSampleAccession=GSM651574; tableName=wgEncodeUwAffyExonArrayHsmmSimpleSignalRep1; type=broadPeak; md5sum=1d17b56fefe3487c7b617bf20f5f27d9; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHsmmSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HSMM; replicate=2; submittedDataVersion=V2 - lab labeling error; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000833; dateSubmitted=2011-03-10; dateUnrestricted=2011-12-10; subId=3816; geoSampleAccession=GSM651575; tableName=wgEncodeUwAffyExonArrayHsmmSimpleSignalRep2; type=broadPeak; md5sum=1c1116c7fc3cefb56a447c9b7b3204b0; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHsmmtSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HSMMtube; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000826; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651576; tableName=wgEncodeUwAffyExonArrayHsmmtSimpleSignalRep1; type=broadPeak; md5sum=616e4bc4bd5315207334fc76d16f49a3; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHsmmtSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HSMMtube; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000826; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824861; labExpId=RS17572; tableName=wgEncodeUwAffyExonArrayHsmmtSimpleSignalRep2; type=broadPeak; md5sum=c0df6f6a2c63eb4201f2f7a2fe6717f7; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHuvecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HUVEC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000368; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472935; tableName=wgEncodeUwAffyExonArrayHuvecSimpleSignalRep1; type=broadPeak; md5sum=c6f83663ec84170f74b628d18bfdbd13; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHuvecSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HUVEC; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000368; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651577; tableName=wgEncodeUwAffyExonArrayHuvecSimpleSignalRep2; type=broadPeak; md5sum=819213d4a73deee17bf1f47d57bdb616; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHvmfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HVMF; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000820; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580037; tableName=wgEncodeUwAffyExonArrayHvmfSimpleSignalRep1; type=broadPeak; md5sum=7e2d1d9c96174fef814e12f959534979; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayHvmfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=HVMF; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000820; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580038; tableName=wgEncodeUwAffyExonArrayHvmfSimpleSignalRep2; type=broadPeak; md5sum=7d68f4fde89359e59d5b03668666ea12; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayJurkatSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=Jurkat; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000369; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472928; tableName=wgEncodeUwAffyExonArrayJurkatSimpleSignalRep1; type=broadPeak; md5sum=be4733fceabba4fdb3cf35fc1e41d713; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayJurkatSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=Jurkat; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000369; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510511; tableName=wgEncodeUwAffyExonArrayJurkatSimpleSignalRep2; type=broadPeak; md5sum=0d2697e2daf6283be15f097e31ff27c7; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayK562SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=K562; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000362; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472926; tableName=wgEncodeUwAffyExonArrayK562SimpleSignalRep1; type=broadPeak; md5sum=40f55f72b5b616ad17fbd87f87e60ec0; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayK562SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=K562; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000362; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472927; tableName=wgEncodeUwAffyExonArrayK562SimpleSignalRep2; type=broadPeak; md5sum=0d52361033fe085d68e53ccce045ea7d; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayLncapSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=LNCaP; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000827; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651578; tableName=wgEncodeUwAffyExonArrayLncapSimpleSignalRep1; type=broadPeak; md5sum=b866e75f4669ac656cfe387aa9bd2b98; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayLncapSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=LNCaP; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000827; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651579; tableName=wgEncodeUwAffyExonArrayLncapSimpleSignalRep2; type=broadPeak; md5sum=d03059611898499dc89a54e8e1ce658e; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayMcf7SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=MCF-7; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000370; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472936; tableName=wgEncodeUwAffyExonArrayMcf7SimpleSignalRep1; type=broadPeak; md5sum=c74c6567cc184a438136032b896dfa77; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayMcf7SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=MCF-7; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000370; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510510; tableName=wgEncodeUwAffyExonArrayMcf7SimpleSignalRep2; type=broadPeak; md5sum=d35d3dc2fd52d42e842410932d55ee78; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNb4SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NB4; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000371; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM510512; tableName=wgEncodeUwAffyExonArrayNb4SimpleSignalRep1; type=broadPeak; md5sum=a6c2887c8ff637e5dbda01e384929727; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNb4SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NB4; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000371; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510513; tableName=wgEncodeUwAffyExonArrayNb4SimpleSignalRep2; type=broadPeak; md5sum=2a869c60211c5da4e0175b090585e166; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhaSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NH-A; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000821; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580043; tableName=wgEncodeUwAffyExonArrayNhaSimpleSignalRep1; type=broadPeak; md5sum=33f27f4a2ff61a9b231c60196ca4a5d4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhaSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NH-A; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000821; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580044; tableName=wgEncodeUwAffyExonArrayNhaSimpleSignalRep2; type=broadPeak; md5sum=b1b738e59f723c7fa301a1b90ff3e4dc; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhbeSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHBE; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002159; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824853; labExpId=RS19003; tableName=wgEncodeUwAffyExonArrayNhbeSimpleSignalRep1; type=broadPeak; md5sum=fc46de736060bd30adc90dc8605f4f50; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhbeSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHBE; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002159; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824854; labExpId=RS19004; tableName=wgEncodeUwAffyExonArrayNhbeSimpleSignalRep2; type=broadPeak; md5sum=338e6f0753cb1ea6e822897fc1166bb6; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhdfadSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHDF-Ad; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000822; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580017; tableName=wgEncodeUwAffyExonArrayNhdfadSimpleSignalRep1; type=broadPeak; md5sum=561121bc41e1a1063b15695986e569aa; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhdfadSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHDF-Ad; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000822; dateSubmitted=2010-08-19; dateUnrestricted=2011-05-19; subId=2109; geoSampleAccession=GSM580018; tableName=wgEncodeUwAffyExonArrayNhdfadSimpleSignalRep2; type=broadPeak; md5sum=f7599ec4c1060ea8c7e259261cc378c1; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhdfneoSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHDF-neo; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000390; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510554; tableName=wgEncodeUwAffyExonArrayNhdfneoSimpleSignalRep1; type=broadPeak; md5sum=d5c294986d6332f4de0d72fa5b89a8d1; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhdfneoSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHDF-neo; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000390; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510557; tableName=wgEncodeUwAffyExonArrayNhdfneoSimpleSignalRep2; type=broadPeak; md5sum=832391bc459622f827b44c69b4faaa7b; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhekSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHEK; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000372; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472937; tableName=wgEncodeUwAffyExonArrayNhekSimpleSignalRep1; type=broadPeak; md5sum=f0ea38b49f7dc4f55c3a209ae0c5a2d5; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhlfSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHLF; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000391; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510577; tableName=wgEncodeUwAffyExonArrayNhlfSimpleSignalRep1; type=broadPeak; md5sum=7ba28714083146d88049d6a5cf84200d; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNhlfSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NHLF; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000391; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM510579; tableName=wgEncodeUwAffyExonArrayNhlfSimpleSignalRep2; type=broadPeak; md5sum=c49aca1c20279db623b1ce96d6dba6b4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNt2d1SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NT2-D1; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002160; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824855; labExpId=RS19005; tableName=wgEncodeUwAffyExonArrayNt2d1SimpleSignalRep1; type=broadPeak; md5sum=1faf48c69c2c652f98a9fcae072d993e; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayNt2d1SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=NT2-D1; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002160; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824856; labExpId=RS19006; tableName=wgEncodeUwAffyExonArrayNt2d1SimpleSignalRep2; type=broadPeak; md5sum=11cfb100f4c11b765818fa6edf04c040; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayPanc1SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=PANC-1; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000373; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472939; tableName=wgEncodeUwAffyExonArrayPanc1SimpleSignalRep1; type=broadPeak; md5sum=623f30f29ef6c1c51ae638fa2eec704d; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayPanc1SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=PANC-1; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000373; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472938; tableName=wgEncodeUwAffyExonArrayPanc1SimpleSignalRep2; type=broadPeak; md5sum=0fb0efe201f551ea9a1f4e16355d5420; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayPrecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=PrEC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002161; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824857; labExpId=RS19007; tableName=wgEncodeUwAffyExonArrayPrecSimpleSignalRep1; type=broadPeak; md5sum=9b00bf9212fc8a71a67f3946075ed220; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayPrecSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=PrEC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002161; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824858; labExpId=RS19008; tableName=wgEncodeUwAffyExonArrayPrecSimpleSignalRep2; type=broadPeak; md5sum=cb229a705f9c0bc06ff3165af324b4f2; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayRptecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=RPTEC; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000828; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651565; tableName=wgEncodeUwAffyExonArrayRptecSimpleSignalRep1; type=broadPeak; md5sum=3ffb983dc0305184eb2d82f168bb1235; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayRptecSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=RPTEC; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000828; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651566; tableName=wgEncodeUwAffyExonArrayRptecSimpleSignalRep2; type=broadPeak; md5sum=18ec74217b2c455157b6b7b97cff9a7b; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySaecSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SAEC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000374; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472923; tableName=wgEncodeUwAffyExonArraySaecSimpleSignalRep1; type=broadPeak; md5sum=d89736f6dd535e6527b931e0323b4b56; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySaecSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SAEC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000374; dateSubmitted=2009-09-21; dateResubmitted=2010-08-19; dateUnrestricted=2010-06-21; subId=2110; geoSampleAccession=GSM472922; tableName=wgEncodeUwAffyExonArraySaecSimpleSignalRep2; type=broadPeak; md5sum=e399feb8617fc77f4f303073ca6e6179; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySkmcSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SKMC; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000363; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM510509; tableName=wgEncodeUwAffyExonArraySkmcSimpleSignalRep1; type=broadPeak; md5sum=8536b93a5a66a547633f352ef2e463f8; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySkmcSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SKMC; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000363; dateSubmitted=2010-01-10; dateResubmitted=2010-08-19; dateUnrestricted=2010-10-10; subId=2110; geoSampleAccession=GSM472911; tableName=wgEncodeUwAffyExonArraySkmcSimpleSignalRep2; type=broadPeak; md5sum=e26a5dbcd92a79ae81b3fbe246ec2243; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySknmcSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SK-N-MC; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002162; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824868; labExpId=RS17573; tableName=wgEncodeUwAffyExonArraySknmcSimpleSignalRep1; type=broadPeak; md5sum=fdd01a9ed2778896becf731e70b9dc60; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySknmcSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SK-N-MC; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002162; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824869; labExpId=RS17574; tableName=wgEncodeUwAffyExonArraySknmcSimpleSignalRep2; type=broadPeak; md5sum=fa6aa0baf27c28fdc131ff7ec5dc624f; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySknshraSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SK-N-SH_RA; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000358; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472913; tableName=wgEncodeUwAffyExonArraySknshraSimpleSignalRep1; type=broadPeak; md5sum=13d13c630ea2002649342cfb0b8bd90f; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArraySknshraSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=SK-N-SH_RA; replicate=2; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000358; dateSubmitted=2009-06-29; dateResubmitted=2010-08-19; dateUnrestricted=2010-03-29; subId=2110; geoSampleAccession=GSM472912; tableName=wgEncodeUwAffyExonArraySknshraSimpleSignalRep2; type=broadPeak; md5sum=47d51163ccb7bcb0222a4309586d8572; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayTh1SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=Th1; replicate=1; origAssembly=hg18; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000364; dateSubmitted=2009-07-02; dateResubmitted=2010-08-19; dateUnrestricted=2010-04-02; subId=2110; geoSampleAccession=GSM472914; tableName=wgEncodeUwAffyExonArrayTh1SimpleSignalRep1; type=broadPeak; md5sum=b44365a12cc87e527757886b3b583b50; size=21M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayWerirb1SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=WERI-Rb-1; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002163; dateSubmitted=2011-10-24; dateUnrestricted=2012-07-24; subId=5011; geoSampleAccession=GSM824870; labExpId=RS17575; tableName=wgEncodeUwAffyExonArrayWerirb1SimpleSignalRep1; type=broadPeak; md5sum=be41e427c0e5289c2c98645860ba5733; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayWi38OhtamSimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=WI-38; treatment=4OHTAM_20nM_72hr; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000830; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651582; tableName=wgEncodeUwAffyExonArrayWi38OhtamSimpleSignalRep1; type=broadPeak; md5sum=92c4d9af69102101b2e67c5dc4d4188b; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayWi38OhtamSimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=WI-38; treatment=4OHTAM_20nM_72hr; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000830; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651583; tableName=wgEncodeUwAffyExonArrayWi38OhtamSimpleSignalRep2; type=broadPeak; md5sum=f361ca9645fa5574788eb8033e274dc4; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayWi38SimpleSignalRep1.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=WI-38; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000829; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651580; tableName=wgEncodeUwAffyExonArrayWi38SimpleSignalRep1; type=broadPeak; md5sum=0bd58f69567a92d5b4b175099621ce96; size=22M; organism=human; http://hgdownload-test.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwAffyExonArray/releaseLatest/wgEncodeUwAffyExonArrayWi38SimpleSignalRep2.broadPeak.gz project=wgEncode; grant=Stam; lab=UW; composite=wgEncodeUwAffyExonArray; dataType=AffyExonArray; view=SimpleSignal; cell=WI-38; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000829; dateSubmitted=2011-01-11; dateUnrestricted=2011-10-10; subId=3216; geoSampleAccession=GSM651581; tableName=wgEncodeUwAffyExonArrayWi38SimpleSignalRep2; type=broadPeak; md5sum=bdf0ff688df7f7770fc72510c7fc6682; size=22M; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/NhlfR2x75Il200Rep1-NhlfR2x75Il200Rep2/NhlfR2x75Il200Rep1-NhlfR2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=NHLF.rep1,NHLF.rep2; cell=NHLF; fileLab=CSHL; insertLength=200; labExpId=NhlfR2x75Il200Rep1,NhlfR2x75Il200Rep2; labProtocolId=NHLF.rep1Il200R2x75WC+,NHLF.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/K562R2x75Il200Rep1-K562R2x75Il200Rep2/K562R2x75Il200Rep1-K562R2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/Gm12878R2x75Il400Rep2/Gm12878R2x75Il400Rep2_Junctions.bed view=Junctions; bioRep=GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=400; labExpId=Gm12878R2x75Il400Rep2; labProtocolId=GM12878.rep2Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4_Junctions.bed view=Junctions; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/H1hescR2x75Il400Rep1/H1hescR2x75Il400Rep1_Junctions.bed view=Junctions; bioRep=H1-hESC.rep1; cell=H1-hESC; fileLab=CSHL; insertLength=400; labExpId=H1hescR2x75Il400Rep1; labProtocolId=H1-hESC.rep1Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/201111_Caltech_Wold_Junctions_mapped_by_CSHL/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2_Junctions.bed view=Junctions; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/HsmmR2x75Il200Rep2/HsmmR2x75Il200Rep2_21.bam view=Alignments; bioRep=HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/K562R2x75Il200Rep1/K562R2x75Il200Rep1_24.bam view=Alignments; bioRep=K562.rep1; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1; labProtocolId=K562.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Hepg2R2x75Il200Rep2/Hepg2R2x75Il200Rep2_19.bam view=Alignments; bioRep=HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Gm12878R2x75Il400Rep2/Gm12878R2x75Il400Rep2_3.bam view=Alignments; bioRep=GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=400; labExpId=Gm12878R2x75Il400Rep2; labProtocolId=GM12878.rep2Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/HuvecR2x75Il200Rep2/HuvecR2x75Il200Rep2_23.bam view=Alignments; bioRep=HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Helas3R2x75Il200Rep2/Helas3R2x75Il200Rep2_17.bam view=Alignments; bioRep=HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Gm12878R2x75Il200Rep2/Gm12878R2x75Il200Rep2_2.bam view=Alignments; bioRep=GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Gm12878R2x75Il200Rep1/Gm12878R2x75Il200Rep1_1.bam view=Alignments; bioRep=GM12878.rep1; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1; labProtocolId=GM12878.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/H1hescR2x75Il200Rep4/H1hescR2x75Il200Rep4_12.bam view=Alignments; bioRep=H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/NhlfR2x75Il200Rep2/NhlfR2x75Il200Rep2_31.bam view=Alignments; bioRep=NHLF.rep2; cell=NHLF; fileLab=CSHL; insertLength=200; labExpId=NhlfR2x75Il200Rep2; labProtocolId=NHLF.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Hepg2R2x75Il200Rep1/Hepg2R2x75Il200Rep1_18.bam view=Alignments; bioRep=HepG2.rep1; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1; labProtocolId=HepG2.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/NhekR2x75Il200Rep1/NhekR2x75Il200Rep1_28.bam view=Alignments; bioRep=NHEK.rep1; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1; labProtocolId=NHEK.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/K562R2x75Il200Rep2/K562R2x75Il200Rep2_25.bam view=Alignments; bioRep=K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep2; labProtocolId=K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/HuvecR2x75Il200Rep1/HuvecR2x75Il200Rep1_22.bam view=Alignments; bioRep=HUVEC.rep1; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1; labProtocolId=HUVEC.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/H1hescR2x75Il200Rep3/H1hescR2x75Il200Rep3_11.bam view=Alignments; bioRep=H1-hESC.rep3; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3; labProtocolId=H1-hESC.rep3Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Gm12892R2x75Il200Rep1/Gm12892R2x75Il200Rep1_6.bam view=Alignments; bioRep=GM12892.rep1; cell=GM12892; fileLab=CSHL; insertLength=200; labExpId=Gm12892R2x75Il200Rep1; labProtocolId=GM12892.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/NhekR2x75Il200Rep2/NhekR2x75Il200Rep2_29.bam view=Alignments; bioRep=NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep2; labProtocolId=NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Helas3R2x75Il200Rep1/Helas3R2x75Il200Rep1_16.bam view=Alignments; bioRep=HeLa-S3.rep1; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1; labProtocolId=HeLa-S3.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/H1hescR2x75Il200Rep2/H1hescR2x75Il200Rep2_10.bam view=Alignments; bioRep=H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Gm12891R2x75Il200Rep1/Gm12891R2x75Il200Rep1_4.bam view=Alignments; bioRep=GM12891.rep1; cell=GM12891; fileLab=CSHL; insertLength=200; labExpId=Gm12891R2x75Il200Rep1; labProtocolId=GM12891.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Mcf7R2x75Il200Rep1/Mcf7R2x75Il200Rep1_26.bam view=Alignments; bioRep=MCF-7.rep1; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1; labProtocolId=MCF-7.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/Mcf7R2x75Il200Rep2/Mcf7R2x75Il200Rep2_27.bam view=Alignments; bioRep=MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/NhlfR2x75Il200Rep1/NhlfR2x75Il200Rep1_30.bam view=Alignments; bioRep=NHLF.rep1; cell=NHLF; fileLab=CSHL; insertLength=200; labExpId=NhlfR2x75Il200Rep1; labProtocolId=NHLF.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/H1hescR2x75Il400Rep1/H1hescR2x75Il400Rep1_13.bam view=Alignments; bioRep=H1-hESC.rep1; cell=H1-hESC; fileLab=CSHL; insertLength=400; labExpId=H1hescR2x75Il400Rep1; labProtocolId=H1-hESC.rep1Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/H1hescR2x75Il200Rep1/H1hescR2x75Il200Rep1_9.bam view=Alignments; bioRep=H1-hESC.rep1; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1; labProtocolId=H1-hESC.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110727_Caltech_Wold_NOT_SUBMITTED/HsmmR2x75Il200Rep1/HsmmR2x75Il200Rep1_20.bam view=Alignments; bioRep=HSMM.rep1; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1; labProtocolId=HSMM.rep1Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/NhlfR2x75Il200Rep1-NhlfR2x75Il200Rep2/Contig.NhlfR2x75Il200Rep1-NhlfR2x75Il200Rep2.bed view=Contigs; bioRep=NHLF.rep1,NHLF.rep2; cell=NHLF; fileLab=CSHL; insertLength=200; labExpId=NhlfR2x75Il200Rep1,NhlfR2x75Il200Rep2; labProtocolId=NHLF.rep1Il200R2x75WC+,NHLF.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2/Contig.HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2.bed view=Contigs; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/Gm12878R2x75Il400Rep2/Contig.Gm12878R2x75Il400Rep2.bed view=Contigs; bioRep=GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=400; labExpId=Gm12878R2x75Il400Rep2; labProtocolId=GM12878.rep2Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4/Contig.H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4.bed view=Contigs; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2/Contig.H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2.bed view=Contigs; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2/Contig.Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2.bed view=Contigs; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2/Contig.NhekR2x75Il200Rep1-NhekR2x75Il200Rep2.bed view=Contigs; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2/Contig.Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2.bed view=Contigs; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/K562R2x75Il200Rep1-K562R2x75Il200Rep2/Contig.K562R2x75Il200Rep1-K562R2x75Il200Rep2.bed view=Contigs; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2/Contig.Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2.bed view=Contigs; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/H1hescR2x75Il400Rep1/Contig.H1hescR2x75Il400Rep1.bed view=Contigs; bioRep=H1-hESC.rep1; cell=H1-hESC; fileLab=CSHL; insertLength=400; labExpId=H1hescR2x75Il400Rep1; labProtocolId=H1-hESC.rep1Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2/Contig.HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2.bed view=Contigs; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20110812_Caltech_Wold_Contigs_NOT_SUBMITTED/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2/Contig.Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2.bed view=Contigs; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/NhlfR2x75Il200Rep1-NhlfR2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=NHLF.rep1,NHLF.rep2; cell=NHLF; fileLab=CSHL; insertLength=200; labExpId=NhlfR2x75Il200Rep1,NhlfR2x75Il200Rep2; labProtocolId=NHLF.rep1Il200R2x75WC+,NHLF.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/NhlfR2x75Il200Rep1-NhlfR2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=NHLF.rep1,NHLF.rep2; cell=NHLF; fileLab=CSHL; insertLength=200; labExpId=NhlfR2x75Il200Rep1,NhlfR2x75Il200Rep2; labProtocolId=NHLF.rep1Il200R2x75WC+,NHLF.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/NhlfR2x75Il200Rep1-NhlfR2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=NHLF.rep1,NHLF.rep2; cell=NHLF; fileLab=CSHL; insertLength=200; labExpId=NhlfR2x75Il200Rep1,NhlfR2x75Il200Rep2; labProtocolId=NHLF.rep1Il200R2x75WC+,NHLF.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Gm12878R2x75Il400Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=400; labExpId=Gm12878R2x75Il400Rep2; labProtocolId=GM12878.rep2Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Gm12878R2x75Il400Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=400; labExpId=Gm12878R2x75Il400Rep2; labProtocolId=GM12878.rep2Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Gm12878R2x75Il400Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=400; labExpId=Gm12878R2x75Il400Rep2; labProtocolId=GM12878.rep2Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/K562R2x75Il200Rep1-K562R2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/K562R2x75Il200Rep1-K562R2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/K562R2x75Il200Rep1-K562R2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il400Rep1_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=H1-hESC.rep1; cell=H1-hESC; fileLab=CSHL; insertLength=400; labExpId=H1hescR2x75Il400Rep1; labProtocolId=H1-hESC.rep1Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il400Rep1_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=H1-hESC.rep1; cell=H1-hESC; fileLab=CSHL; insertLength=400; labExpId=H1hescR2x75Il400Rep1; labProtocolId=H1-hESC.rep1Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/H1hescR2x75Il400Rep1_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=H1-hESC.rep1; cell=H1-hESC; fileLab=CSHL; insertLength=400; labExpId=H1hescR2x75Il400Rep1; labProtocolId=H1-hESC.rep1Il400R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_caltech_NOT_SUBMITTED/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9195-LID9196_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID9195,LID9196; labProtocolId=001N-,002N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9195-LID9196_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID9195,LID9196; labProtocolId=001N-,002N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9195-LID9196_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID9195,LID9196; labProtocolId=001N-,002N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18549_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID18549; labProtocolId=006C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18549_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID18549; labProtocolId=006C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18549_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID18549; labProtocolId=006C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8692-LID8701_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8692,LID8701; labProtocolId=033WC+,034WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8692-LID8701_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8692,LID8701; labProtocolId=033WC+,034WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8692-LID8701_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8692,LID8701; labProtocolId=033WC+,034WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8469-LID8470_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=011C,012C; cell=HeLa-S3; donorId=.; labExpId=LID8469,LID8470; labProtocolId=011C+,012C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8469-LID8470_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=011C,012C; cell=HeLa-S3; donorId=.; labExpId=LID8469,LID8470; labProtocolId=011C+,012C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8469-LID8470_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=011C,012C; cell=HeLa-S3; donorId=.; labExpId=LID8469,LID8470; labProtocolId=011C+,012C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9189-LID9190_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=025NP,026NP; cell=K562; donorId=.; labExpId=LID9189,LID9190; labProtocolId=025NPt,026NPt; labVersion=iIDR; localization=nucleoplasm; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9189-LID9190_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=025NP,026NP; cell=K562; donorId=.; labExpId=LID9189,LID9190; labProtocolId=025NPt,026NPt; labVersion=iIDR; localization=nucleoplasm; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9189-LID9190_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=025NP,026NP; cell=K562; donorId=.; labExpId=LID9189,LID9190; labProtocolId=025NPt,026NPt; labVersion=iIDR; localization=nucleoplasm; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9187-LID9188_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=025NL,026NL; cell=K562; donorId=.; labExpId=LID9187,LID9188; labProtocolId=025NLt,026NLt; labVersion=iIDR; localization=nucleolus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9187-LID9188_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=025NL,026NL; cell=K562; donorId=.; labExpId=LID9187,LID9188; labProtocolId=025NLt,026NLt; labVersion=iIDR; localization=nucleolus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9187-LID9188_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=025NL,026NL; cell=K562; donorId=.; labExpId=LID9187,LID9188; labProtocolId=025NLt,026NLt; labVersion=iIDR; localization=nucleolus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9197-LID9198_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID9197,LID9198; labProtocolId=003N-,004N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9197-LID9198_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID9197,LID9198; labProtocolId=003N-,004N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9197-LID9198_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID9197,LID9198; labProtocolId=003N-,004N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8963-LID8964_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID8963,LID8964; labProtocolId=021WC+,022WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8963-LID8964_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID8963,LID8964; labProtocolId=021WC+,022WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8963-LID8964_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID8963,LID8964; labProtocolId=021WC+,022WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8831_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8831; labProtocolId=036WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8831_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8831; labProtocolId=036WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8831_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8831; labProtocolId=036WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8559-LID8560_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID8559,LID8560; labProtocolId=011N+,012N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8559-LID8560_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID8559,LID8560; labProtocolId=011N+,012N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8559-LID8560_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID8559,LID8560; labProtocolId=011N+,012N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9185-LID9186_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=025CH,026CH; cell=K562; donorId=.; labExpId=LID9185,LID9186; labProtocolId=025CHt,026CHt; labVersion=iIDR; localization=chromatin; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9185-LID9186_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=025CH,026CH; cell=K562; donorId=.; labExpId=LID9185,LID9186; labProtocolId=025CHt,026CHt; labVersion=iIDR; localization=chromatin; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9185-LID9186_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=025CH,026CH; cell=K562; donorId=.; labExpId=LID9185,LID9186; labProtocolId=025CHt,026CHt; labVersion=iIDR; localization=chromatin; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8965-LID8966_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID8965,LID8966; labProtocolId=017WC+,018WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8965-LID8966_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID8965,LID8966; labProtocolId=017WC+,018WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8965-LID8966_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID8965,LID8966; labProtocolId=017WC+,018WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8467-LID8468_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID8467,LID8468; labProtocolId=003C+,004C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8467-LID8468_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID8467,LID8468; labProtocolId=003C+,004C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8467-LID8468_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID8467,LID8468; labProtocolId=003C+,004C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18556_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=029C; cell=HUVEC; donorId=7F3771; labExpId=LID18556; labProtocolId=029C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18556_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=029C; cell=HUVEC; donorId=7F3771; labExpId=LID18556; labProtocolId=029C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18556_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=029C; cell=HUVEC; donorId=7F3771; labExpId=LID18556; labProtocolId=029C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8695_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8695; labProtocolId=036WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8695_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8695; labProtocolId=036WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8695_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8695; labProtocolId=036WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8556-LID8557_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID8556,LID8557; labProtocolId=001N+,002N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8556-LID8557_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID8556,LID8557; labProtocolId=001N+,002N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8556-LID8557_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID8556,LID8557; labProtocolId=001N+,002N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8826-LID8827_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8826,LID8827; labProtocolId=023WC-,024WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8826-LID8827_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8826,LID8827; labProtocolId=023WC-,024WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8826-LID8827_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8826,LID8827; labProtocolId=023WC-,024WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9001-LID9002_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID9001,LID9002; labProtocolId=017WC-,018WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9001-LID9002_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID9001,LID9002; labProtocolId=017WC-,018WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9001-LID9002_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID9001,LID9002; labProtocolId=017WC-,018WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18547-LID18548_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID18547,LID18548; labProtocolId=003C-,004C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18547-LID18548_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID18547,LID18548; labProtocolId=003C-,004C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18547-LID18548_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID18547,LID18548; labProtocolId=003C-,004C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9003-LID9011_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID9003,LID9011; labProtocolId=019WC-,020WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9003-LID9011_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID9003,LID9011; labProtocolId=019WC-,020WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9003-LID9011_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID9003,LID9011; labProtocolId=019WC-,020WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8967-LID8968_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID8967,LID8968; labProtocolId=019WC+,020WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8967-LID8968_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID8967,LID8968; labProtocolId=019WC+,020WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8967-LID8968_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID8967,LID8968; labProtocolId=019WC+,020WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9206-LID9207_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID9206,LID9207; labProtocolId=029N-,030N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9206-LID9207_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID9206,LID9207; labProtocolId=029N-,030N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9206-LID9207_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID9206,LID9207; labProtocolId=029N-,030N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9202-LID9203_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID9202,LID9203; labProtocolId=013N-,014N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9202-LID9203_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID9202,LID9203; labProtocolId=013N-,014N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9202-LID9203_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID9202,LID9203; labProtocolId=013N-,014N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8788-LID8789_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8788,LID8789; labProtocolId=009WC-,010WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8788-LID8789_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8788,LID8789; labProtocolId=009WC-,010WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8788-LID8789_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8788,LID8789; labProtocolId=009WC-,010WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8463-LID8464_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8463,LID8464; labProtocolId=009WC+,010WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8463-LID8464_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8463,LID8464; labProtocolId=009WC+,010WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8463-LID8464_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8463,LID8464; labProtocolId=009WC+,010WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9204-LID9205_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID9204,LID9205; labProtocolId=027N-,028N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9204-LID9205_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID9204,LID9205; labProtocolId=027N-,028N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9204-LID9205_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID9204,LID9205; labProtocolId=027N-,028N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8665-LID8666_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID8665,LID8666; labProtocolId=007WC-,008WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8665-LID8666_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID8665,LID8666; labProtocolId=007WC-,008WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8665-LID8666_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID8665,LID8666; labProtocolId=007WC-,008WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9200-LID9201_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID9200,LID9201; labProtocolId=011N-,012N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9200-LID9201_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID9200,LID9201; labProtocolId=011N-,012N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9200-LID9201_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID9200,LID9201; labProtocolId=011N-,012N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8797-LID8798_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID8797,LID8798; labProtocolId=027N+,028N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8797-LID8798_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID8797,LID8798; labProtocolId=027N+,028N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8797-LID8798_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID8797,LID8798; labProtocolId=027N+,028N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8558_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID8558; labProtocolId=006N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8558_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID8558; labProtocolId=006N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8558_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID8558; labProtocolId=006N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16629-LID16630_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID16629,LID16630; labProtocolId=003WC+,004WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16629-LID16630_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID16629,LID16630; labProtocolId=003WC+,004WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16629-LID16630_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID16629,LID16630; labProtocolId=003WC+,004WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8465-LID8466_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID8465,LID8466; labProtocolId=001C+,002C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8465-LID8466_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID8465,LID8466; labProtocolId=001C+,002C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8465-LID8466_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID8465,LID8466; labProtocolId=001C+,002C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8828-LID8829_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8828,LID8829; labProtocolId=033WC-,034WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8828-LID8829_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8828,LID8829; labProtocolId=033WC-,034WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8828-LID8829_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8828,LID8829; labProtocolId=033WC-,034WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8694_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8694; labProtocolId=035WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8694_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8694; labProtocolId=035WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8694_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8694; labProtocolId=035WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8969-LID8970_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID8969,LID8970; labProtocolId=037WC+,038WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8969-LID8970_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID8969,LID8970; labProtocolId=037WC+,038WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8969-LID8970_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID8969,LID8970; labProtocolId=037WC+,038WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18552-LID18553_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID18552,LID18553; labProtocolId=013C-,014C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18552-LID18553_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID18552,LID18553; labProtocolId=013C-,014C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18552-LID18553_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID18552,LID18553; labProtocolId=013C-,014C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18551_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=012C; cell=HeLa-S3; donorId=.; labExpId=LID18551; labProtocolId=012C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18551_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=012C; cell=HeLa-S3; donorId=.; labExpId=LID18551; labProtocolId=012C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18551_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=012C; cell=HeLa-S3; donorId=.; labExpId=LID18551; labProtocolId=012C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9007-LID9008_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID9007,LID9008; labProtocolId=037WC-,038WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9007-LID9008_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID9007,LID9008; labProtocolId=037WC-,038WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9007-LID9008_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID9007,LID9008; labProtocolId=037WC-,038WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8824-LID8825_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8824,LID8825; labProtocolId=015WC-,016WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8824-LID8825_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8824,LID8825; labProtocolId=015WC-,016WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8824-LID8825_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8824,LID8825; labProtocolId=015WC-,016WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8792-LID8793_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID8792,LID8793; labProtocolId=013WC-,014WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8792-LID8793_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID8792,LID8793; labProtocolId=013WC-,014WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8792-LID8793_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID8792,LID8793; labProtocolId=013WC-,014WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18545-LID18546_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID18545,LID18546; labProtocolId=001C-,002C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18545-LID18546_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID18545,LID18546; labProtocolId=001C-,002C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18545-LID18546_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID18545,LID18546; labProtocolId=001C-,002C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16633-LID16634_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID16633,LID16634; labProtocolId=011WC+,012WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16633-LID16634_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID16633,LID16634; labProtocolId=011WC+,012WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16633-LID16634_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID16633,LID16634; labProtocolId=011WC+,012WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8536_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID8536; labProtocolId=006C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8536_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID8536; labProtocolId=006C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8536_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID8536; labProtocolId=006C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8534-LID8535_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID8534,LID8535; labProtocolId=013N+,014N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8534-LID8535_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID8534,LID8535; labProtocolId=013N+,014N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8534-LID8535_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID8534,LID8535; labProtocolId=013N+,014N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8710-LID8711_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8710,LID8711; labProtocolId=023WC+,024WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8710-LID8711_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8710,LID8711; labProtocolId=023WC+,024WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8710-LID8711_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8710,LID8711; labProtocolId=023WC+,024WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16627-LID16628_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID16627,LID16628; labProtocolId=001WC+,002WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16627-LID16628_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID16627,LID16628; labProtocolId=001WC+,002WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16627-LID16628_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID16627,LID16628; labProtocolId=001WC+,002WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8661-LID8662_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID8661,LID8662; labProtocolId=003WC-,004WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8661-LID8662_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID8661,LID8662; labProtocolId=003WC-,004WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8661-LID8662_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID8661,LID8662; labProtocolId=003WC-,004WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8659-LID8660_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID8659,LID8660; labProtocolId=001WC-,002WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8659-LID8660_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID8659,LID8660; labProtocolId=001WC-,002WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8659-LID8660_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID8659,LID8660; labProtocolId=001WC-,002WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9005-LID9006_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID9005,LID9006; labProtocolId=021WC-,022WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9005-LID9006_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID9005,LID9006; labProtocolId=021WC-,022WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9005-LID9006_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID9005,LID9006; labProtocolId=021WC-,022WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9199_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID9199; labProtocolId=006N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9199_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID9199; labProtocolId=006N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID9199_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID9199; labProtocolId=006N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8461-LID8462_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8461,LID8462; labProtocolId=005WC+,006WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8461-LID8462_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8461,LID8462; labProtocolId=005WC+,006WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8461-LID8462_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8461,LID8462; labProtocolId=005WC+,006WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16631-LID16632_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID16631,LID16632; labProtocolId=007WC+,008WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16631-LID16632_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID16631,LID16632; labProtocolId=007WC+,008WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16631-LID16632_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID16631,LID16632; labProtocolId=007WC+,008WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8663-LID8664_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8663,LID8664; labProtocolId=005WC-,006WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8663-LID8664_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8663,LID8664; labProtocolId=005WC-,006WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8663-LID8664_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8663,LID8664; labProtocolId=005WC-,006WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8830_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8830; labProtocolId=035WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8830_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8830; labProtocolId=035WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8830_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8830; labProtocolId=035WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8688-LID8689_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=029C,030C; cell=HUVEC; donorId=7F3771; labExpId=LID8688,LID8689; labProtocolId=029C+,030C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8688-LID8689_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=029C,030C; cell=HUVEC; donorId=7F3771; labExpId=LID8688,LID8689; labProtocolId=029C+,030C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8688-LID8689_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=029C,030C; cell=HUVEC; donorId=7F3771; labExpId=LID8688,LID8689; labProtocolId=029C+,030C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16635-LID16636_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID16635,LID16636; labProtocolId=013WC+,014WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16635-LID16636_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID16635,LID16636; labProtocolId=013WC+,014WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID16635-LID16636_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID16635,LID16636; labProtocolId=013WC+,014WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8795-LID8796_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=027C,028C; cell=NHEK; donorId=4F1155J; labExpId=LID8795,LID8796; labProtocolId=027C+,028C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8795-LID8796_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=027C,028C; cell=NHEK; donorId=4F1155J; labExpId=LID8795,LID8796; labProtocolId=027C+,028C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8795-LID8796_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=027C,028C; cell=NHEK; donorId=4F1155J; labExpId=LID8795,LID8796; labProtocolId=027C+,028C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8790-LID8791_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID8790,LID8791; labProtocolId=011WC-,012WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8790-LID8791_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID8790,LID8791; labProtocolId=011WC-,012WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8790-LID8791_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID8790,LID8791; labProtocolId=011WC-,012WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18554_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=027C; cell=NHEK; donorId=4F1155J; labExpId=LID18554; labProtocolId=027C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18554_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=027C; cell=NHEK; donorId=4F1155J; labExpId=LID18554; labProtocolId=027C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID18554_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=027C; cell=NHEK; donorId=4F1155J; labExpId=LID18554; labProtocolId=027C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8532-LID8533_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID8532,LID8533; labProtocolId=003N+,004N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8532-LID8533_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID8532,LID8533; labProtocolId=003N+,004N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8532-LID8533_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID8532,LID8533; labProtocolId=003N+,004N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8686-LID8687_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8686,LID8687; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8686-LID8687_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8686,LID8687; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8686-LID8687_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8686,LID8687; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8690-LID8691_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID8690,LID8691; labProtocolId=029N+,030N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8690-LID8691_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID8690,LID8691; labProtocolId=029N+,030N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8690-LID8691_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID8690,LID8691; labProtocolId=029N+,030N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8471-LID8472_GeneGencV10IAcuff.gff view=GeneGencV10IAcuff; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID8471,LID8472; labProtocolId=013C+,014C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8471-LID8472_ExonsGencV10IAcuff.gff view=ExonsGencV10IAcuff; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID8471,LID8472; labProtocolId=013C+,014C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20120220_long_quantifications_gencodev10_cufflinks_cshl_NOT_SUBMITTED/LID8471-LID8472_TranscriptGencV10IAcuff.gtf view=TranscriptGencV10IAcuff; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID8471,LID8472; labProtocolId=013C+,014C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Helas3R2x75Il200Rep1-Helas3R2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=HeLa-S3.rep1,HeLa-S3.rep2; cell=HeLa-S3; fileLab=CSHL; insertLength=200; labExpId=Helas3R2x75Il200Rep1,Helas3R2x75Il200Rep2; labProtocolId=HeLa-S3.rep1Il200R2x75WC+,HeLa-S3.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/K562R2x75Il200Rep1-K562R2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/K562R2x75Il200Rep1-K562R2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/K562R2x75Il200Rep1-K562R2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=K562.rep1,K562.rep2; cell=K562; fileLab=CSHL; insertLength=200; labExpId=K562R2x75Il200Rep1,K562R2x75Il200Rep2; labProtocolId=K562.rep1Il200R2x75WC+,K562.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/HsmmR2x75Il200Rep1-HsmmR2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=HSMM.rep1,HSMM.rep2; cell=HSMM; fileLab=CSHL; insertLength=200; labExpId=HsmmR2x75Il200Rep1,HsmmR2x75Il200Rep2; labProtocolId=HSMM.rep1Il200R2x75WC+,HSMM.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Hepg2R2x75Il200Rep1-Hepg2R2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=HepG2.rep1,HepG2.rep2; cell=HepG2; fileLab=CSHL; insertLength=200; labExpId=Hepg2R2x75Il200Rep1,Hepg2R2x75Il200Rep2; labProtocolId=HepG2.rep1Il200R2x75WC+,HepG2.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4_GeneDeNovo.gff view=GeneDeNovo; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/H1hescR2x75Il200Rep3-H1hescR2x75Il200Rep4_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=H1-hESC.rep3,H1-hESC.rep4; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep3,H1hescR2x75Il200Rep4; labProtocolId=H1-hESC.rep3Il200R2x75WC+,H1-hESC.rep4Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=3,4; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/H1hescR2x75Il200Rep1-H1hescR2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=H1-hESC.rep1,H1-hESC.rep2; cell=H1-hESC; fileLab=CSHL; insertLength=200; labExpId=H1hescR2x75Il200Rep1,H1hescR2x75Il200Rep2; labProtocolId=H1-hESC.rep1Il200R2x75WC+,H1-hESC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Gm12878R2x75Il200Rep1-Gm12878R2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=GM12878.rep1,GM12878.rep2; cell=GM12878; fileLab=CSHL; insertLength=200; labExpId=Gm12878R2x75Il200Rep1,Gm12878R2x75Il200Rep2; labProtocolId=GM12878.rep1Il200R2x75WC+,GM12878.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/HuvecR2x75Il200Rep1-HuvecR2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=HUVEC.rep1,HUVEC.rep2; cell=HUVEC; fileLab=CSHL; insertLength=200; labExpId=HuvecR2x75Il200Rep1,HuvecR2x75Il200Rep2; labProtocolId=HUVEC.rep1Il200R2x75WC+,HUVEC.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/NhekR2x75Il200Rep1-NhekR2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=NHEK.rep1,NHEK.rep2; cell=NHEK; fileLab=CSHL; insertLength=200; labExpId=NhekR2x75Il200Rep1,NhekR2x75Il200Rep2; labProtocolId=NHEK.rep1Il200R2x75WC+,NHEK.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2_GeneDeNovo.gff view=GeneDeNovo; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCaltechRnaSeq/caltech/Mcf7R2x75Il200Rep1-Mcf7R2x75Il200Rep2_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=MCF-7.rep1,MCF-7.rep2; cell=MCF-7; fileLab=CSHL; insertLength=200; labExpId=Mcf7R2x75Il200Rep1,Mcf7R2x75Il200Rep2; labProtocolId=MCF-7.rep1Il200R2x75WC+,MCF-7.rep2Il200R2x75WC+; labVersion=iIDR; localization=cell; mapAlgorithm=STAR; readType=2x75; replicate=1,2; rnaExtract=longPolyA; seqPlatform=.; spikeInPool=.; grant=Myers; lab=Caltech; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18549_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID18549; labProtocolId=006C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18549_GeneDeNovo.gff view=GeneDeNovo; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID18549; labProtocolId=006C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18549_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID18549; labProtocolId=006C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46857-LID46858_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=089C,090C; cell=MCF-7; donorId=.; labExpId=LID46857,LID46858; labProtocolId=089C+,090C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46857-LID46858_GeneDeNovo.gff view=GeneDeNovo; bioRep=089C,090C; cell=MCF-7; donorId=.; labExpId=LID46857,LID46858; labProtocolId=089C+,090C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46857-LID46858_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=089C,090C; cell=MCF-7; donorId=.; labExpId=LID46857,LID46858; labProtocolId=089C+,090C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47099-LID47100_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=067WC,068WC; cell=hMSC-BM; donorId=0051105.11,0050602.11; labExpId=LID47099,LID47100; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47099-LID47100_GeneDeNovo.gff view=GeneDeNovo; bioRep=067WC,068WC; cell=hMSC-BM; donorId=0051105.11,0050602.11; labExpId=LID47099,LID47100; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47099-LID47100_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=067WC,068WC; cell=hMSC-BM; donorId=0051105.11,0050602.11; labExpId=LID47099,LID47100; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8469-LID8470_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=011C,012C; cell=HeLa-S3; donorId=.; labExpId=LID8469,LID8470; labProtocolId=011C+,012C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8469-LID8470_GeneDeNovo.gff view=GeneDeNovo; bioRep=011C,012C; cell=HeLa-S3; donorId=.; labExpId=LID8469,LID8470; labProtocolId=011C+,012C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8469-LID8470_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=011C,012C; cell=HeLa-S3; donorId=.; labExpId=LID8469,LID8470; labProtocolId=011C+,012C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9189-LID9190_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=025NP,026NP; cell=K562; donorId=.; labExpId=LID9189,LID9190; labProtocolId=025NPt,026NPt; labVersion=iIDR; localization=nucleoplasm; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9189-LID9190_GeneDeNovo.gff view=GeneDeNovo; bioRep=025NP,026NP; cell=K562; donorId=.; labExpId=LID9189,LID9190; labProtocolId=025NPt,026NPt; labVersion=iIDR; localization=nucleoplasm; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9189-LID9190_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=025NP,026NP; cell=K562; donorId=.; labExpId=LID9189,LID9190; labProtocolId=025NPt,026NPt; labVersion=iIDR; localization=nucleoplasm; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45238-LID45239_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=045WC,046WC; cell=IMR90; donorId=58607680; labExpId=LID45238,LID45239; labProtocolId=045WCt,046WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45238-LID45239_GeneDeNovo.gff view=GeneDeNovo; bioRep=045WC,046WC; cell=IMR90; donorId=58607680; labExpId=LID45238,LID45239; labProtocolId=045WCt,046WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45238-LID45239_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=045WC,046WC; cell=IMR90; donorId=58607680; labExpId=LID45238,LID45239; labProtocolId=045WCt,046WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9197-LID9198_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID9197,LID9198; labProtocolId=003N-,004N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9197-LID9198_GeneDeNovo.gff view=GeneDeNovo; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID9197,LID9198; labProtocolId=003N-,004N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9197-LID9198_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID9197,LID9198; labProtocolId=003N-,004N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8831_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8831; labProtocolId=036WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8831_GeneDeNovo.gff view=GeneDeNovo; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8831; labProtocolId=036WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8831_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8831; labProtocolId=036WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47245-LID47246_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=047WC,048WC; cell=SkMC; donorId=9011302,8121902.17; labExpId=LID47245,LID47246; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47245-LID47246_GeneDeNovo.gff view=GeneDeNovo; bioRep=047WC,048WC; cell=SkMC; donorId=9011302,8121902.17; labExpId=LID47245,LID47246; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47245-LID47246_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=047WC,048WC; cell=SkMC; donorId=9011302,8121902.17; labExpId=LID47245,LID47246; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8559-LID8560_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID8559,LID8560; labProtocolId=011N+,012N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8559-LID8560_GeneDeNovo.gff view=GeneDeNovo; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID8559,LID8560; labProtocolId=011N+,012N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8559-LID8560_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID8559,LID8560; labProtocolId=011N+,012N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47097-LID47098_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=065WC,066WC; cell=hMSC-AT; donorId=0102604.12,9061601.12; labExpId=LID47097,LID47098; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47097-LID47098_GeneDeNovo.gff view=GeneDeNovo; bioRep=065WC,066WC; cell=hMSC-AT; donorId=0102604.12,9061601.12; labExpId=LID47097,LID47098; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47097-LID47098_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=065WC,066WC; cell=hMSC-AT; donorId=0102604.12,9061601.12; labExpId=LID47097,LID47098; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9185-LID9186_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=025CH,026CH; cell=K562; donorId=.; labExpId=LID9185,LID9186; labProtocolId=025CHt,026CHt; labVersion=iIDR; localization=chromatin; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9185-LID9186_GeneDeNovo.gff view=GeneDeNovo; bioRep=025CH,026CH; cell=K562; donorId=.; labExpId=LID9185,LID9186; labProtocolId=025CHt,026CHt; labVersion=iIDR; localization=chromatin; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9185-LID9186_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=025CH,026CH; cell=K562; donorId=.; labExpId=LID9185,LID9186; labProtocolId=025CHt,026CHt; labVersion=iIDR; localization=chromatin; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8965-LID8966_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID8965,LID8966; labProtocolId=017WC+,018WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8965-LID8966_GeneDeNovo.gff view=GeneDeNovo; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID8965,LID8966; labProtocolId=017WC+,018WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8965-LID8966_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID8965,LID8966; labProtocolId=017WC+,018WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8467-LID8468_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID8467,LID8468; labProtocolId=003C+,004C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8467-LID8468_GeneDeNovo.gff view=GeneDeNovo; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID8467,LID8468; labProtocolId=003C+,004C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8467-LID8468_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID8467,LID8468; labProtocolId=003C+,004C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18556_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=029C; cell=HUVEC; donorId=7F3771; labExpId=LID18556; labProtocolId=029C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18556_GeneDeNovo.gff view=GeneDeNovo; bioRep=029C; cell=HUVEC; donorId=7F3771; labExpId=LID18556; labProtocolId=029C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18556_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=029C; cell=HUVEC; donorId=7F3771; labExpId=LID18556; labProtocolId=029C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8695_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8695; labProtocolId=036WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8695_GeneDeNovo.gff view=GeneDeNovo; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8695; labProtocolId=036WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8695_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=036WC; cell=HMEC; donorId=.; labExpId=LID8695; labProtocolId=036WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9001-LID9002_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID9001,LID9002; labProtocolId=017WC-,018WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9001-LID9002_GeneDeNovo.gff view=GeneDeNovo; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID9001,LID9002; labProtocolId=017WC-,018WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9001-LID9002_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=017WC,018WC; cell=AG04450; donorId=.; labExpId=LID9001,LID9002; labProtocolId=017WC-,018WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47023-LID47022_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=057WCt,058WCt; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47022,LID47023; cell=HAoEC; rnaExtract=total; spikeInPool=Nist13; donorId=7071706.1,8061102.1; lab=CSHL; bioRep=057WC,058WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47023-LID47022_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=057WCt,058WCt; replicate=1,2; view=GeneDeNovo; labExpId=LID47022,LID47023; cell=HAoEC; rnaExtract=total; spikeInPool=Nist13; donorId=7071706.1,8061102.1; lab=CSHL; bioRep=057WC,058WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47023-LID47022_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=057WCt,058WCt; replicate=1,2; view=ExonsDeNovo; labExpId=LID47022,LID47023; cell=HAoEC; rnaExtract=total; spikeInPool=Nist13; donorId=7071706.1,8061102.1; lab=CSHL; bioRep=057WC,058WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18547-LID18548_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID18547,LID18548; labProtocolId=003C-,004C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18547-LID18548_GeneDeNovo.gff view=GeneDeNovo; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID18547,LID18548; labProtocolId=003C-,004C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18547-LID18548_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=003C,004C; cell=GM12878; donorId=.; labExpId=LID18547,LID18548; labProtocolId=003C-,004C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9003-LID9011_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID9003,LID9011; labProtocolId=019WC-,020WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9003-LID9011_GeneDeNovo.gff view=GeneDeNovo; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID9003,LID9011; labProtocolId=019WC-,020WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9003-LID9011_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID9003,LID9011; labProtocolId=019WC-,020WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8967-LID8968_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID8967,LID8968; labProtocolId=019WC+,020WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8967-LID8968_GeneDeNovo.gff view=GeneDeNovo; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID8967,LID8968; labProtocolId=019WC+,020WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8967-LID8968_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=019WC,020WC; cell=SK-N-SH_RA; donorId=.; labExpId=LID8967,LID8968; labProtocolId=019WC+,020WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47255-LID47254_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47254,LID47255; cell=HWP; rnaExtract=total; spikeInPool=Nist13; donorId=8120201.5,0092205; lab=CSHL; bioRep=079WC,080WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47255-LID47254_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=GeneDeNovo; labExpId=LID47254,LID47255; cell=HWP; rnaExtract=total; spikeInPool=Nist13; donorId=8120201.5,0092205; lab=CSHL; bioRep=079WC,080WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47255-LID47254_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=ExonsDeNovo; labExpId=LID47254,LID47255; cell=HWP; rnaExtract=total; spikeInPool=Nist13; donorId=8120201.5,0092205; lab=CSHL; bioRep=079WC,080WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9202-LID9203_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID9202,LID9203; labProtocolId=013N-,014N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9202-LID9203_GeneDeNovo.gff view=GeneDeNovo; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID9202,LID9203; labProtocolId=013N-,014N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9202-LID9203_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID9202,LID9203; labProtocolId=013N-,014N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8788-LID8789_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8788,LID8789; labProtocolId=009WC-,010WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8788-LID8789_GeneDeNovo.gff view=GeneDeNovo; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8788,LID8789; labProtocolId=009WC-,010WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8788-LID8789_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8788,LID8789; labProtocolId=009WC-,010WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46860-LID46859_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=089N+,090N+; replicate=3,4; view=TranscriptDeNovo; labExpId=LID46859,LID46860; cell=MCF-7; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=089N,090N; type=gtf; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46860-LID46859_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=089N+,090N+; replicate=3,4; view=GeneDeNovo; labExpId=LID46859,LID46860; cell=MCF-7; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=089N,090N; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46860-LID46859_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=089N+,090N+; replicate=3,4; view=ExonsDeNovo; labExpId=LID46859,LID46860; cell=MCF-7; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=089N,090N; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45612-LID45611_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=045N+,046N+; replicate=1,2; view=TranscriptDeNovo; labExpId=LID45611,LID45612; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=58607680; lab=CSHL; bioRep=045C,046C; type=gtf; localization=cytosol; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45612-LID45611_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=045N+,046N+; replicate=1,2; view=GeneDeNovo; labExpId=LID45611,LID45612; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=58607680; lab=CSHL; bioRep=045C,046C; type=gff; localization=cytosol; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45612-LID45611_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=045N+,046N+; replicate=1,2; view=ExonsDeNovo; labExpId=LID45611,LID45612; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=58607680; lab=CSHL; bioRep=045C,046C; type=gff; localization=cytosol; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9204-LID9205_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID9204,LID9205; labProtocolId=027N-,028N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9204-LID9205_GeneDeNovo.gff view=GeneDeNovo; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID9204,LID9205; labProtocolId=027N-,028N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9204-LID9205_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID9204,LID9205; labProtocolId=027N-,028N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9200-LID9201_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID9200,LID9201; labProtocolId=011N-,012N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9200-LID9201_GeneDeNovo.gff view=GeneDeNovo; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID9200,LID9201; labProtocolId=011N-,012N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9200-LID9201_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=011N,012N; cell=HeLa-S3; donorId=.; labExpId=LID9200,LID9201; labProtocolId=011N-,012N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47105-LID47253_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=073WC,074WC; cell=HPIEpC; donorId=9041503.2,9012801.2; labExpId=LID47105,LID47253; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47105-LID47253_GeneDeNovo.gff view=GeneDeNovo; bioRep=073WC,074WC; cell=HPIEpC; donorId=9041503.2,9012801.2; labExpId=LID47105,LID47253; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47105-LID47253_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=073WC,074WC; cell=HPIEpC; donorId=9041503.2,9012801.2; labExpId=LID47105,LID47253; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16629-LID16630_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID16629,LID16630; labProtocolId=003WC+,004WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16629-LID16630_GeneDeNovo.gff view=GeneDeNovo; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID16629,LID16630; labProtocolId=003WC+,004WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16629-LID16630_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID16629,LID16630; labProtocolId=003WC+,004WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8465-LID8466_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID8465,LID8466; labProtocolId=001C+,002C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8465-LID8466_GeneDeNovo.gff view=GeneDeNovo; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID8465,LID8466; labProtocolId=001C+,002C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8465-LID8466_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID8465,LID8466; labProtocolId=001C+,002C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8828-LID8829_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8828,LID8829; labProtocolId=033WC-,034WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8828-LID8829_GeneDeNovo.gff view=GeneDeNovo; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8828,LID8829; labProtocolId=033WC-,034WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8828-LID8829_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8828,LID8829; labProtocolId=033WC-,034WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8694_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8694; labProtocolId=035WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8694_GeneDeNovo.gff view=GeneDeNovo; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8694; labProtocolId=035WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8694_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8694; labProtocolId=035WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18552-LID18553_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID18552,LID18553; labProtocolId=013C-,014C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18552-LID18553_GeneDeNovo.gff view=GeneDeNovo; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID18552,LID18553; labProtocolId=013C-,014C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18552-LID18553_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID18552,LID18553; labProtocolId=013C-,014C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9007-LID9008_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID9007,LID9008; labProtocolId=037WC-,038WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9007-LID9008_GeneDeNovo.gff view=GeneDeNovo; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID9007,LID9008; labProtocolId=037WC-,038WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9007-LID9008_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID9007,LID9008; labProtocolId=037WC-,038WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8824-LID8825_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8824,LID8825; labProtocolId=015WC-,016WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8824-LID8825_GeneDeNovo.gff view=GeneDeNovo; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8824,LID8825; labProtocolId=015WC-,016WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8824-LID8825_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8824,LID8825; labProtocolId=015WC-,016WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18545-LID18546_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID18545,LID18546; labProtocolId=001C-,002C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18545-LID18546_GeneDeNovo.gff view=GeneDeNovo; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID18545,LID18546; labProtocolId=001C-,002C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18545-LID18546_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=001C,002C; cell=K562; donorId=.; labExpId=LID18545,LID18546; labProtocolId=001C-,002C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8534-LID8535_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID8534,LID8535; labProtocolId=013N+,014N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8534-LID8535_GeneDeNovo.gff view=GeneDeNovo; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID8534,LID8535; labProtocolId=013N+,014N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8534-LID8535_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=013N,014N; cell=HepG2; donorId=.; labExpId=LID8534,LID8535; labProtocolId=013N+,014N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16627-LID16628_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID16627,LID16628; labProtocolId=001WC+,002WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16627-LID16628_GeneDeNovo.gff view=GeneDeNovo; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID16627,LID16628; labProtocolId=001WC+,002WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16627-LID16628_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID16627,LID16628; labProtocolId=001WC+,002WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45613-LID45635_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=045N,046N; cell=IMR90; donorId=58607680; labExpId=LID45613,LID45635; labProtocolId=045C+,046C+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45613-LID45635_GeneDeNovo.gff view=GeneDeNovo; bioRep=045N,046N; cell=IMR90; donorId=58607680; labExpId=LID45613,LID45635; labProtocolId=045C+,046C+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45613-LID45635_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=045N,046N; cell=IMR90; donorId=58607680; labExpId=LID45613,LID45635; labProtocolId=045C+,046C+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46597-LID46596_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=085N+,086N+; replicate=3,4; view=TranscriptDeNovo; labExpId=LID46596,LID46597; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=085N,086N; type=gtf; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46597-LID46596_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=085N+,086N+; replicate=3,4; view=GeneDeNovo; labExpId=LID46596,LID46597; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=085N,086N; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46597-LID46596_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=085N+,086N+; replicate=3,4; view=ExonsDeNovo; labExpId=LID46596,LID46597; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=085N,086N; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47104-LID47301_TranscriptDeNovo.gtf protocol=N/A,None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47301,LID47104; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; donorId=0101504.13,0032601.13; lab=CSHL; bioRep=071WC,072WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47104-LID47301_GeneDeNovo.gff protocol=N/A,None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=GeneDeNovo; labExpId=LID47301,LID47104; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; donorId=0101504.13,0032601.13; lab=CSHL; bioRep=071WC,072WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47104-LID47301_ExonsDeNovo.gff protocol=N/A,None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=ExonsDeNovo; labExpId=LID47301,LID47104; cell=HPC-PL; rnaExtract=total; spikeInPool=Nist13; donorId=0101504.13,0032601.13; lab=CSHL; bioRep=071WC,072WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8461-LID8462_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8461,LID8462; labProtocolId=005WC+,006WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8461-LID8462_GeneDeNovo.gff view=GeneDeNovo; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8461,LID8462; labProtocolId=005WC+,006WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8461-LID8462_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8461,LID8462; labProtocolId=005WC+,006WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8663-LID8664_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8663,LID8664; labProtocolId=005WC-,006WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8663-LID8664_GeneDeNovo.gff view=GeneDeNovo; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8663,LID8664; labProtocolId=005WC-,006WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8663-LID8664_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=005WC,006WC; cell=H1-hESC; donorId=.; labExpId=LID8663,LID8664; labProtocolId=005WC-,006WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46599-LID46598_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=085WC+,086WC+; replicate=3,4; view=TranscriptDeNovo; labExpId=LID46598,LID46599; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=085WC,086WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46599-LID46598_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=085WC+,086WC+; replicate=3,4; view=GeneDeNovo; labExpId=LID46598,LID46599; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=085WC,086WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46599-LID46598_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=085WC+,086WC+; replicate=3,4; view=ExonsDeNovo; labExpId=LID46598,LID46599; cell=SK-N-SH; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=085WC,086WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8830_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8830; labProtocolId=035WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8830_GeneDeNovo.gff view=GeneDeNovo; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8830; labProtocolId=035WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8830_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=035WC; cell=NHEK; donorId=.; labExpId=LID8830; labProtocolId=035WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=5; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16635-LID16636_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID16635,LID16636; labProtocolId=013WC+,014WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16635-LID16636_GeneDeNovo.gff view=GeneDeNovo; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID16635,LID16636; labProtocolId=013WC+,014WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16635-LID16636_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID16635,LID16636; labProtocolId=013WC+,014WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8795-LID8796_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=027C,028C; cell=NHEK; donorId=4F1155J; labExpId=LID8795,LID8796; labProtocolId=027C+,028C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8795-LID8796_GeneDeNovo.gff view=GeneDeNovo; bioRep=027C,028C; cell=NHEK; donorId=4F1155J; labExpId=LID8795,LID8796; labProtocolId=027C+,028C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8795-LID8796_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=027C,028C; cell=NHEK; donorId=4F1155J; labExpId=LID8795,LID8796; labProtocolId=027C+,028C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18554_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=027C; cell=NHEK; donorId=4F1155J; labExpId=LID18554; labProtocolId=027C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18554_GeneDeNovo.gff view=GeneDeNovo; bioRep=027C; cell=NHEK; donorId=4F1155J; labExpId=LID18554; labProtocolId=027C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID18554_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=027C; cell=NHEK; donorId=4F1155J; labExpId=LID18554; labProtocolId=027C-; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47025-LID47024_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=059WCt,060WCt; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47024,LID47025; cell=HCH; rnaExtract=total; spikeInPool=Nist13; donorId=0011308.2P,8100808.2; lab=CSHL; bioRep=059WC,060WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47025-LID47024_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=059WCt,060WCt; replicate=1,2; view=GeneDeNovo; labExpId=LID47024,LID47025; cell=HCH; rnaExtract=total; spikeInPool=Nist13; donorId=0011308.2P,8100808.2; lab=CSHL; bioRep=059WC,060WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47025-LID47024_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=059WCt,060WCt; replicate=1,2; view=ExonsDeNovo; labExpId=LID47024,LID47025; cell=HCH; rnaExtract=total; spikeInPool=Nist13; donorId=0011308.2P,8100808.2; lab=CSHL; bioRep=059WC,060WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45017-LID45016_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=045WC+,046WC+; replicate=1,2; view=TranscriptDeNovo; labExpId=LID45016,LID45017; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=58607680; lab=CSHL; bioRep=045WC,046WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45017-LID45016_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=045WC+,046WC+; replicate=1,2; view=GeneDeNovo; labExpId=LID45016,LID45017; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=58607680; lab=CSHL; bioRep=045WC,046WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45017-LID45016_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=045WC+,046WC+; replicate=1,2; view=ExonsDeNovo; labExpId=LID45016,LID45017; cell=IMR90; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=58607680; lab=CSHL; bioRep=045WC,046WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8532-LID8533_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID8532,LID8533; labProtocolId=003N+,004N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8532-LID8533_GeneDeNovo.gff view=GeneDeNovo; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID8532,LID8533; labProtocolId=003N+,004N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8532-LID8533_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=003N,004N; cell=GM12878; donorId=.; labExpId=LID8532,LID8533; labProtocolId=003N+,004N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8690-LID8691_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID8690,LID8691; labProtocolId=029N+,030N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8690-LID8691_GeneDeNovo.gff view=GeneDeNovo; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID8690,LID8691; labProtocolId=029N+,030N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8690-LID8691_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID8690,LID8691; labProtocolId=029N+,030N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8471-LID8472_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID8471,LID8472; labProtocolId=013C+,014C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8471-LID8472_GeneDeNovo.gff view=GeneDeNovo; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID8471,LID8472; labProtocolId=013C+,014C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8471-LID8472_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=013C,014C; cell=HepG2; donorId=.; labExpId=LID8471,LID8472; labProtocolId=013C+,014C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47256-LID47257_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=081WC,082WC; cell=NHEM.f_M2; donorId=6022001,5071302.2; labExpId=LID47256,LID47257; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47256-LID47257_GeneDeNovo.gff view=GeneDeNovo; bioRep=081WC,082WC; cell=NHEM.f_M2; donorId=6022001,5071302.2; labExpId=LID47256,LID47257; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47256-LID47257_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=081WC,082WC; cell=NHEM.f_M2; donorId=6022001,5071302.2; labExpId=LID47256,LID47257; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47094-LID47095_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=061WC,062WC; cell=HFDPC; donorId=0102703.3,0100503.2; labExpId=LID47094,LID47095; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47094-LID47095_GeneDeNovo.gff view=GeneDeNovo; bioRep=061WC,062WC; cell=HFDPC; donorId=0102703.3,0100503.2; labExpId=LID47094,LID47095; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47094-LID47095_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=061WC,062WC; cell=HFDPC; donorId=0102703.3,0100503.2; labExpId=LID47094,LID47095; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9195-LID9196_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID9195,LID9196; labProtocolId=001N-,002N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9195-LID9196_GeneDeNovo.gff view=GeneDeNovo; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID9195,LID9196; labProtocolId=001N-,002N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9195-LID9196_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID9195,LID9196; labProtocolId=001N-,002N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8692-LID8701_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8692,LID8701; labProtocolId=033WC+,034WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8692-LID8701_GeneDeNovo.gff view=GeneDeNovo; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8692,LID8701; labProtocolId=033WC+,034WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8692-LID8701_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=033WC,034WC; cell=NHLF; donorId=.; labExpId=LID8692,LID8701; labProtocolId=033WC+,034WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47021_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=056WC; cell=HAoAF; donorId=6090101.11; labExpId=LID47021; labProtocolId=056WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47021_GeneDeNovo.gff view=GeneDeNovo; bioRep=056WC; cell=HAoAF; donorId=6090101.11; labExpId=LID47021; labProtocolId=056WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47021_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=056WC; cell=HAoAF; donorId=6090101.11; labExpId=LID47021; labProtocolId=056WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9187-LID9188_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=025NL,026NL; cell=K562; donorId=.; labExpId=LID9187,LID9188; labProtocolId=025NLt,026NLt; labVersion=iIDR; localization=nucleolus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9187-LID9188_GeneDeNovo.gff view=GeneDeNovo; bioRep=025NL,026NL; cell=K562; donorId=.; labExpId=LID9187,LID9188; labProtocolId=025NLt,026NLt; labVersion=iIDR; localization=nucleolus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9187-LID9188_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=025NL,026NL; cell=K562; donorId=.; labExpId=LID9187,LID9188; labProtocolId=025NLt,026NLt; labVersion=iIDR; localization=nucleolus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=total; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47249-LID47250_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=051WC,052WC; cell=HVMF; donorId=6091203.3,6100401.3; labExpId=LID47249,LID47250; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47249-LID47250_GeneDeNovo.gff view=GeneDeNovo; bioRep=051WC,052WC; cell=HVMF; donorId=6091203.3,6100401.3; labExpId=LID47249,LID47250; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47249-LID47250_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=051WC,052WC; cell=HVMF; donorId=6091203.3,6100401.3; labExpId=LID47249,LID47250; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8963-LID8964_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID8963,LID8964; labProtocolId=021WC+,022WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8963-LID8964_GeneDeNovo.gff view=GeneDeNovo; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID8963,LID8964; labProtocolId=021WC+,022WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8963-LID8964_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID8963,LID8964; labProtocolId=021WC+,022WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47248-LID47247_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47247,LID47248; cell=NHDF; rnaExtract=total; spikeInPool=Nist13; donorId=7071701.2,0060801.3; lab=CSHL; bioRep=049WC,050WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47248-LID47247_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=GeneDeNovo; labExpId=LID47247,LID47248; cell=NHDF; rnaExtract=total; spikeInPool=Nist13; donorId=7071701.2,0060801.3; lab=CSHL; bioRep=049WC,050WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47248-LID47247_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=ExonsDeNovo; labExpId=LID47247,LID47248; cell=NHDF; rnaExtract=total; spikeInPool=Nist13; donorId=7071701.2,0060801.3; lab=CSHL; bioRep=049WC,050WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47261-LID47260_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=TranscriptDeNovo; labExpId=LID47260,LID47261; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; donorId=0022202.16,9100101.15; lab=CSHL; bioRep=093WC,094WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47261-LID47260_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=GeneDeNovo; labExpId=LID47260,LID47261; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; donorId=0022202.16,9100101.15; lab=CSHL; bioRep=093WC,094WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47261-LID47260_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=.; replicate=1,2; view=ExonsDeNovo; labExpId=LID47260,LID47261; cell=HSaVEC; rnaExtract=total; spikeInPool=Nist13; donorId=0022202.16,9100101.15; lab=CSHL; bioRep=093WC,094WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8556-LID8557_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID8556,LID8557; labProtocolId=001N+,002N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8556-LID8557_GeneDeNovo.gff view=GeneDeNovo; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID8556,LID8557; labProtocolId=001N+,002N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8556-LID8557_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=001N,002N; cell=K562; donorId=.; labExpId=LID8556,LID8557; labProtocolId=001N+,002N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8826-LID8827_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8826,LID8827; labProtocolId=023WC-,024WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8826-LID8827_GeneDeNovo.gff view=GeneDeNovo; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8826,LID8827; labProtocolId=023WC-,024WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8826-LID8827_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8826,LID8827; labProtocolId=023WC-,024WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9206-LID9207_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID9206,LID9207; labProtocolId=029N-,030N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9206-LID9207_GeneDeNovo.gff view=GeneDeNovo; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID9206,LID9207; labProtocolId=029N-,030N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9206-LID9207_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=029N,030N; cell=HUVEC; donorId=7F3771; labExpId=LID9206,LID9207; labProtocolId=029N-,030N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8463-LID8464_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8463,LID8464; labProtocolId=009WC+,010WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8463-LID8464_GeneDeNovo.gff view=GeneDeNovo; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8463,LID8464; labProtocolId=009WC+,010WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8463-LID8464_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=009WC,010WC; cell=HUVEC; donorId=7F3771; labExpId=LID8463,LID8464; labProtocolId=009WC+,010WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8665-LID8666_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID8665,LID8666; labProtocolId=007WC-,008WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8665-LID8666_GeneDeNovo.gff view=GeneDeNovo; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID8665,LID8666; labProtocolId=007WC-,008WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8665-LID8666_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID8665,LID8666; labProtocolId=007WC-,008WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8797-LID8798_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID8797,LID8798; labProtocolId=027N+,028N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8797-LID8798_GeneDeNovo.gff view=GeneDeNovo; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID8797,LID8798; labProtocolId=027N+,028N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8797-LID8798_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=027N,028N; cell=NHEK; donorId=4F1155J; labExpId=LID8797,LID8798; labProtocolId=027N+,028N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8558_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID8558; labProtocolId=006N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8558_GeneDeNovo.gff view=GeneDeNovo; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID8558; labProtocolId=006N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8558_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID8558; labProtocolId=006N+; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46594-LID46595_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=085C,086C; cell=SK-N-SH; donorId=.; labExpId=LID46594,LID46595; labProtocolId=085C+,086C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46594-LID46595_GeneDeNovo.gff view=GeneDeNovo; bioRep=085C,086C; cell=SK-N-SH; donorId=.; labExpId=LID46594,LID46595; labProtocolId=085C+,086C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID46594-LID46595_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=085C,086C; cell=SK-N-SH; donorId=.; labExpId=LID46594,LID46595; labProtocolId=085C+,086C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47258-LID47259_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=083WC,084WC; cell=NHEM_M2; donorId=7012303,7011001.2; labExpId=LID47258,LID47259; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47258-LID47259_GeneDeNovo.gff view=GeneDeNovo; bioRep=083WC,084WC; cell=NHEM_M2; donorId=7012303,7011001.2; labExpId=LID47258,LID47259; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47258-LID47259_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=083WC,084WC; cell=NHEM_M2; donorId=7012303,7011001.2; labExpId=LID47258,LID47259; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45901_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=043WC; cell=CD34+_Mobilized; donorId=.; labExpId=LID45901; labProtocolId=043WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45901_GeneDeNovo.gff view=GeneDeNovo; bioRep=043WC; cell=CD34+_Mobilized; donorId=.; labExpId=LID45901; labProtocolId=043WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45901_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=043WC; cell=CD34+_Mobilized; donorId=.; labExpId=LID45901; labProtocolId=043WCt; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8969-LID8970_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID8969,LID8970; labProtocolId=037WC+,038WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8969-LID8970_GeneDeNovo.gff view=GeneDeNovo; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID8969,LID8970; labProtocolId=037WC+,038WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8969-LID8970_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=037WC,038WC; cell=BJ; donorId=.; labExpId=LID8969,LID8970; labProtocolId=037WC+,038WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45900-LID45899_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=087N+,088N+; replicate=3,4; view=TranscriptDeNovo; labExpId=LID45899,LID45900; cell=A549; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=087N,088N; type=gtf; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45900-LID45899_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=087N+,088N+; replicate=3,4; view=GeneDeNovo; labExpId=LID45899,LID45900; cell=A549; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=087N,088N; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45900-LID45899_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=087N+,088N+; replicate=3,4; view=ExonsDeNovo; labExpId=LID45899,LID45900; cell=A549; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=.; lab=CSHL; bioRep=087N,088N; type=gff; localization=nucleus; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8792-LID8793_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID8792,LID8793; labProtocolId=013WC-,014WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8792-LID8793_GeneDeNovo.gff view=GeneDeNovo; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID8792,LID8793; labProtocolId=013WC-,014WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8792-LID8793_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=013WC,014WC; cell=HepG2; donorId=.; labExpId=LID8792,LID8793; labProtocolId=013WC-,014WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16633-LID16634_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID16633,LID16634; labProtocolId=011WC+,012WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16633-LID16634_GeneDeNovo.gff view=GeneDeNovo; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID16633,LID16634; labProtocolId=011WC+,012WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16633-LID16634_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID16633,LID16634; labProtocolId=011WC+,012WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8536_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID8536; labProtocolId=006C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8536_GeneDeNovo.gff view=GeneDeNovo; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID8536; labProtocolId=006C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8536_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=006C; cell=H1-hESC; donorId=.; labExpId=LID8536; labProtocolId=006C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8710-LID8711_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8710,LID8711; labProtocolId=023WC+,024WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8710-LID8711_GeneDeNovo.gff view=GeneDeNovo; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8710,LID8711; labProtocolId=023WC+,024WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8710-LID8711_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=023WC,024WC; cell=HSMM; donorId=.; labExpId=LID8710,LID8711; labProtocolId=023WC+,024WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8661-LID8662_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID8661,LID8662; labProtocolId=003WC-,004WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8661-LID8662_GeneDeNovo.gff view=GeneDeNovo; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID8661,LID8662; labProtocolId=003WC-,004WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8661-LID8662_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=003WC,004WC; cell=GM12878; donorId=.; labExpId=LID8661,LID8662; labProtocolId=003WC-,004WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44497-LID44594_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=039WC+,040WC+; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44594,LID44497; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=RO01746; lab=CSHL; bioRep=039WC,040WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44497-LID44594_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=039WC+,040WC+; replicate=1,2; view=GeneDeNovo; labExpId=LID44594,LID44497; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=RO01746; lab=CSHL; bioRep=039WC,040WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44497-LID44594_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=039WC+,040WC+; replicate=1,2; view=ExonsDeNovo; labExpId=LID44594,LID44497; cell=Monocytes-CD14+; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=RO01746; lab=CSHL; bioRep=039WC,040WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47251-LID47252_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=053WC,054WC; cell=HOB; donorId=0091301,0090202.1; labExpId=LID47251,LID47252; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47251-LID47252_GeneDeNovo.gff view=GeneDeNovo; bioRep=053WC,054WC; cell=HOB; donorId=0091301,0090202.1; labExpId=LID47251,LID47252; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47251-LID47252_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=053WC,054WC; cell=HOB; donorId=0091301,0090202.1; labExpId=LID47251,LID47252; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8659-LID8660_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID8659,LID8660; labProtocolId=001WC-,002WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8659-LID8660_GeneDeNovo.gff view=GeneDeNovo; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID8659,LID8660; labProtocolId=001WC-,002WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8659-LID8660_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=001WC,002WC; cell=K562; donorId=.; labExpId=LID8659,LID8660; labProtocolId=001WC-,002WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44499-LID44498_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=041WC+,042WC+; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44498,LID44499; cell=CD20+; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=RO01794,RO01778; lab=CSHL; bioRep=041WC,042WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44499-LID44498_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=041WC+,042WC+; replicate=1,2; view=GeneDeNovo; labExpId=LID44498,LID44499; cell=CD20+; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=RO01794,RO01778; lab=CSHL; bioRep=041WC,042WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44499-LID44498_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=041WC+,042WC+; replicate=1,2; view=ExonsDeNovo; labExpId=LID44498,LID44499; cell=CD20+; rnaExtract=longPolyA; spikeInPool=Nist14; donorId=RO01794,RO01778; lab=CSHL; bioRep=041WC,042WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9005-LID9006_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID9005,LID9006; labProtocolId=021WC-,022WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9005-LID9006_GeneDeNovo.gff view=GeneDeNovo; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID9005,LID9006; labProtocolId=021WC-,022WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9005-LID9006_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=021WC,022WC; cell=A549; donorId=.; labExpId=LID9005,LID9006; labProtocolId=021WC-,022WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45897-LID45898_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=087C,088C; cell=A549; donorId=.; labExpId=LID45897,LID45898; labProtocolId=087C+,088C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45897-LID45898_GeneDeNovo.gff view=GeneDeNovo; bioRep=087C,088C; cell=A549; donorId=.; labExpId=LID45897,LID45898; labProtocolId=087C+,088C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID45897-LID45898_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=087C,088C; cell=A549; donorId=.; labExpId=LID45897,LID45898; labProtocolId=087C+,088C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x101D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44660-LID44659_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=041WC-,042WC-; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44659,LID44660; cell=CD20+; rnaExtract=longNonPolyA; spikeInPool=Nist14; donorId=RO01794,RO01778; lab=CSHL; bioRep=041WC,042WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44660-LID44659_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=041WC-,042WC-; replicate=1,2; view=GeneDeNovo; labExpId=LID44659,LID44660; cell=CD20+; rnaExtract=longNonPolyA; spikeInPool=Nist14; donorId=RO01794,RO01778; lab=CSHL; bioRep=041WC,042WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44660-LID44659_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=041WC-,042WC-; replicate=1,2; view=ExonsDeNovo; labExpId=LID44659,LID44660; cell=CD20+; rnaExtract=longNonPolyA; spikeInPool=Nist14; donorId=RO01794,RO01778; lab=CSHL; bioRep=041WC,042WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9199_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID9199; labProtocolId=006N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9199_GeneDeNovo.gff view=GeneDeNovo; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID9199; labProtocolId=006N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID9199_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=006N; cell=H1-hESC; donorId=.; labExpId=LID9199; labProtocolId=006N-; labVersion=iIDR; localization=nucleus; protocol=None; readType=2x76D; replicate=2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44658-LID44657_TranscriptDeNovo.gtf protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=039WC-,040WC-; replicate=1,2; view=TranscriptDeNovo; labExpId=LID44657,LID44658; cell=Monocytes-CD14+; rnaExtract=longNonPolyA; spikeInPool=Nist14; donorId=RO01746; lab=CSHL; bioRep=039WC,040WC; type=gtf; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44658-LID44657_GeneDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=039WC-,040WC-; replicate=1,2; view=GeneDeNovo; labExpId=LID44657,LID44658; cell=Monocytes-CD14+; rnaExtract=longNonPolyA; spikeInPool=Nist14; donorId=RO01746; lab=CSHL; bioRep=039WC,040WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID44658-LID44657_ExonsDeNovo.gff protocol=None; seqPlatform=Illumina_GA2x; dataType=RnaSeq; readType=2x76D; dataVersion=ENCODE_Mar_2012_Freeze; labProtocolId=039WC-,040WC-; replicate=1,2; view=ExonsDeNovo; labExpId=LID44657,LID44658; cell=Monocytes-CD14+; rnaExtract=longNonPolyA; spikeInPool=Nist14; donorId=RO01746; lab=CSHL; bioRep=039WC,040WC; type=gff; localization=cell; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16631-LID16632_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID16631,LID16632; labProtocolId=007WC+,008WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16631-LID16632_GeneDeNovo.gff view=GeneDeNovo; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID16631,LID16632; labProtocolId=007WC+,008WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID16631-LID16632_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=007WC,008WC; cell=NHEK; donorId=4F1155J; labExpId=LID16631,LID16632; labProtocolId=007WC+,008WC+; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8688-LID8689_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=029C,030C; cell=HUVEC; donorId=7F3771; labExpId=LID8688,LID8689; labProtocolId=029C+,030C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8688-LID8689_GeneDeNovo.gff view=GeneDeNovo; bioRep=029C,030C; cell=HUVEC; donorId=7F3771; labExpId=LID8688,LID8689; labProtocolId=029C+,030C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8688-LID8689_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=029C,030C; cell=HUVEC; donorId=7F3771; labExpId=LID8688,LID8689; labProtocolId=029C+,030C+; labVersion=iIDR; localization=cytosol; protocol=None; readType=2x76D; replicate=3,4; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8790-LID8791_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID8790,LID8791; labProtocolId=011WC-,012WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8790-LID8791_GeneDeNovo.gff view=GeneDeNovo; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID8790,LID8791; labProtocolId=011WC-,012WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8790-LID8791_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=011WC,012WC; cell=HeLa-S3; donorId=.; labExpId=LID8790,LID8791; labProtocolId=011WC-,012WC-; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longNonPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8686-LID8687_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8686,LID8687; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8686-LID8687_GeneDeNovo.gff view=GeneDeNovo; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8686,LID8687; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID8686-LID8687_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=015WC,016WC; cell=MCF-7; donorId=.; labExpId=LID8686,LID8687; labProtocolId=015WC+1,016WC+1; labVersion=iIDR; localization=cell; protocol=None; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; spikeInPool=Nist14; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47299-LID47300_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=069WC,070WC; cell=hMSC-UC; donorId=0052501.7,0081101.7; labExpId=LID47299,LID47300; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47299-LID47300_GeneDeNovo.gff view=GeneDeNovo; bioRep=069WC,070WC; cell=hMSC-UC; donorId=0052501.7,0081101.7; labExpId=LID47299,LID47300; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47299-LID47300_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=069WC,070WC; cell=hMSC-UC; donorId=0052501.7,0081101.7; labExpId=LID47299,LID47300; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47096_TranscriptDeNovo.gtf view=TranscriptDeNovo; bioRep=063WC; cell=HMEpC; donorId=6022801.3; labExpId=LID47096; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47096_GeneDeNovo.gff view=GeneDeNovo; bioRep=063WC; cell=HMEpC; donorId=6022801.3; labExpId=LID47096; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/cshl/LID47096_ExonsDeNovo.gff view=ExonsDeNovo; bioRep=063WC; cell=HMEpC; donorId=6022801.3; labExpId=LID47096; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; dataVersion=ENCODE_Mar_2012_Freeze; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_C12H5ACXX_2.spikeins.bam view=Spikeins; bioRep=098; cell=Liver; donorId=STL004; labExpId=LID48880; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_C12H5ACXX_2_1.txt.gz view=FastqRd1; bioRep=098; cell=Liver; donorId=STL004; labExpId=LID48880; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_C12H5ACXX_2_strand-.bigWig view=MinusRawSignal; bioRep=098; cell=Liver; donorId=STL004; labExpId=LID48880; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_C12H5ACXX_2_strand+.bigWig view=PlusRawSignal; bioRep=098; cell=Liver; donorId=STL004; labExpId=LID48880; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_C12H5ACXX_2.bam view=Alignments; bioRep=098; cell=Liver; donorId=STL004; labExpId=LID48880; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_C12H5ACXX_2_2.txt.gz view=FastqRd2; bioRep=098; cell=Liver; donorId=STL004; labExpId=LID48880; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880-LID48881_TranscriptGencV10.gtf view=TranscriptGencV10; bioRep=098,099; cell=Liver; donorId=STL004,STL011; labExpId=LID48880,LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_LID48881_SJ.bed view=Junctions; bioRep=098,099; cell=Liver; donorId=STL004,STL011; labExpId=LID48880,LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880-LID48881_GeneGencV10.gff view=GeneGencV10; bioRep=098,099; cell=Liver; donorId=STL004,STL011; labExpId=LID48880,LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880-LID48881_ExonsGencV10.gff view=ExonsGencV10; bioRep=098,099; cell=Liver; donorId=STL004,STL011; labExpId=LID48880,LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48880_LID48881_Contig.bed view=Contigs; bioRep=098,099; cell=Liver; donorId=STL004,STL011; labExpId=LID48880,LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48881_C10LWACXX_7.spikeins.bam view=Spikeins; bioRep=099; cell=Liver; donorId=STL011; labExpId=LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48881_C10LWACXX_7_1.txt.gz view=FastqRd1; bioRep=099; cell=Liver; donorId=STL011; labExpId=LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48881_C10LWACXX_7_strand-.bigWig view=MinusRawSignal; bioRep=099; cell=Liver; donorId=STL011; labExpId=LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48881_C10LWACXX_7_strand+.bigWig view=PlusRawSignal; bioRep=099; cell=Liver; donorId=STL011; labExpId=LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48881_C10LWACXX_7.bam view=Alignments; bioRep=099; cell=Liver; donorId=STL011; labExpId=LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde//encode/pre-DCC/wgEncodeCshlLongRnaSeq/20121204_LID48880_LID48881/LID48881_C10LWACXX_7_2.txt.gz view=FastqRd2; bioRep=099; cell=Liver; donorId=STL011; labExpId=LID48881; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=None; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Nist13; dateProcessed=20121211; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38235_AD1RBLACXX_4.spikeins.bam view=Spikeins; bioRep=153; cell=HCASMC; donorId=8072501.3P; labExpId=SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38235_AD1RBLACXX_4_1.txt.gz view=FastqRd1; bioRep=153; cell=HCASMC; donorId=8072501.3P; labExpId=SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38235_AD1RBLACXX_4_strand-.bigWig view=MinusRawSignal; bioRep=153; cell=HCASMC; donorId=8072501.3P; labExpId=SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38235_AD1RBLACXX_4_strand+.bigWig view=PlusRawSignal; bioRep=153; cell=HCASMC; donorId=8072501.3P; labExpId=SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38235_AD1RBLACXX_4.bam view=Alignments; bioRep=153; cell=HCASMC; donorId=8072501.3P; labExpId=SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38235_AD1RBLACXX_4_2.txt.gz view=FastqRd2; bioRep=153; cell=HCASMC; donorId=8072501.3P; labExpId=SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38227_BC1HH9ACXX_8.spikeins.bam view=Spikeins; bioRep=169; cell=HPAEC; donorId=8033102.3P; labExpId=SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38227_BC1HH9ACXX_8_1.txt.gz view=FastqRd1; bioRep=169; cell=HPAEC; donorId=8033102.3P; labExpId=SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38227_BC1HH9ACXX_8_strand-.bigWig view=MinusRawSignal; bioRep=169; cell=HPAEC; donorId=8033102.3P; labExpId=SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38227_BC1HH9ACXX_8_strand+.bigWig view=PlusRawSignal; bioRep=169; cell=HPAEC; donorId=8033102.3P; labExpId=SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38227_BC1HH9ACXX_8.bam view=Alignments; bioRep=169; cell=HPAEC; donorId=8033102.3P; labExpId=SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38227_BC1HH9ACXX_8_2.txt.gz view=FastqRd2; bioRep=169; cell=HPAEC; donorId=8033102.3P; labExpId=SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232-SID38233_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=150,151; cell=HCAEC; donorId=2061201.1P,8112001.23P; labExpId=SID38232,SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_SID38233_SJ.bed view=Junctions; bioRep=150,151; cell=HCAEC; donorId=2061201.1P,8112001.23P; labExpId=SID38232,SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232-SID38233_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=150,151; cell=HCAEC; donorId=2061201.1P,8112001.23P; labExpId=SID38232,SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232-SID38233_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=150,151; cell=HCAEC; donorId=2061201.1P,8112001.23P; labExpId=SID38232,SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_SID38233_Contig.bed view=Contigs; bioRep=150,151; cell=HCAEC; donorId=2061201.1P,8112001.23P; labExpId=SID38232,SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38217_AD1RBLACXX_8.spikeins.bam view=Spikeins; bioRep=187; cell=HUtSMC; donorId=8011507.2P; labExpId=SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38217_AD1RBLACXX_8_1.txt.gz view=FastqRd1; bioRep=187; cell=HUtSMC; donorId=8011507.2P; labExpId=SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38217_AD1RBLACXX_8_strand-.bigWig view=MinusRawSignal; bioRep=187; cell=HUtSMC; donorId=8011507.2P; labExpId=SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38217_AD1RBLACXX_8_strand+.bigWig view=PlusRawSignal; bioRep=187; cell=HUtSMC; donorId=8011507.2P; labExpId=SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38217_AD1RBLACXX_8.bam view=Alignments; bioRep=187; cell=HUtSMC; donorId=8011507.2P; labExpId=SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38217_AD1RBLACXX_8_2.txt.gz view=FastqRd2; bioRep=187; cell=HUtSMC; donorId=8011507.2P; labExpId=SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195-SID38196_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=164,165; cell=HDMEC; donorId=9110304P,9110305P; labExpId=SID38195,SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_SID38196_SJ.bed view=Junctions; bioRep=164,165; cell=HDMEC; donorId=9110304P,9110305P; labExpId=SID38195,SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195-SID38196_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=164,165; cell=HDMEC; donorId=9110304P,9110305P; labExpId=SID38195,SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195-SID38196_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=164,165; cell=HDMEC; donorId=9110304P,9110305P; labExpId=SID38195,SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_SID38196_Contig.bed view=Contigs; bioRep=164,165; cell=HDMEC; donorId=9110304P,9110305P; labExpId=SID38195,SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38228_AC1GKKACXX_1.spikeins.bam view=Spikeins; bioRep=170; cell=HPASMC; donorId=0121402.6P; labExpId=SID38228; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38228_AC1GKKACXX_1_1.txt.gz view=FastqRd1; bioRep=170; cell=HPASMC; donorId=0121402.6P; labExpId=SID38228; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38228_AC1GKKACXX_1_strand-.bigWig view=MinusRawSignal; bioRep=170; cell=HPASMC; donorId=0121402.6P; labExpId=SID38228; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38228_AC1GKKACXX_1_strand+.bigWig view=PlusRawSignal; bioRep=170; cell=HPASMC; donorId=0121402.6P; labExpId=SID38228; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38228_AC1GKKACXX_1.bam view=Alignments; bioRep=170; cell=HPASMC; donorId=0121402.6P; labExpId=SID38228; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38228_AC1GKKACXX_1_2.txt.gz view=FastqRd2; bioRep=170; cell=HPASMC; donorId=0121402.6P; labExpId=SID38228; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38215_BD1NTFACXX_7.spikeins.bam view=Spikeins; bioRep=185; cell=HUASMC; donorId=2022903.1P; labExpId=SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38215_BD1NTFACXX_7_1.txt.gz view=FastqRd1; bioRep=185; cell=HUASMC; donorId=2022903.1P; labExpId=SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38215_BD1NTFACXX_7_strand-.bigWig view=MinusRawSignal; bioRep=185; cell=HUASMC; donorId=2022903.1P; labExpId=SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38215_BD1NTFACXX_7_strand+.bigWig view=PlusRawSignal; bioRep=185; cell=HUASMC; donorId=2022903.1P; labExpId=SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38215_BD1NTFACXX_7.bam view=Alignments; bioRep=185; cell=HUASMC; donorId=2022903.1P; labExpId=SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38215_BD1NTFACXX_7_2.txt.gz view=FastqRd2; bioRep=185; cell=HUASMC; donorId=2022903.1P; labExpId=SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38241_AC1GKKACXX_6.spikeins.bam view=Spikeins; bioRep=175; cell=HPMEC; donorId=9090301P; labExpId=SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38241_AC1GKKACXX_6_1.txt.gz view=FastqRd1; bioRep=175; cell=HPMEC; donorId=9090301P; labExpId=SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38241_AC1GKKACXX_6_strand-.bigWig view=MinusRawSignal; bioRep=175; cell=HPMEC; donorId=9090301P; labExpId=SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38241_AC1GKKACXX_6_strand+.bigWig view=PlusRawSignal; bioRep=175; cell=HPMEC; donorId=9090301P; labExpId=SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38241_AC1GKKACXX_6.bam view=Alignments; bioRep=175; cell=HPMEC; donorId=9090301P; labExpId=SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38241_AC1GKKACXX_6_2.txt.gz view=FastqRd2; bioRep=175; cell=HPMEC; donorId=9090301P; labExpId=SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_BD1NTFACXX_6.spikeins.bam view=Spikeins; bioRep=184; cell=HUASMC; donorId=2022904.2P; labExpId=SID38214; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_BD1NTFACXX_6_1.txt.gz view=FastqRd1; bioRep=184; cell=HUASMC; donorId=2022904.2P; labExpId=SID38214; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_BD1NTFACXX_6_strand-.bigWig view=MinusRawSignal; bioRep=184; cell=HUASMC; donorId=2022904.2P; labExpId=SID38214; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_BD1NTFACXX_6_strand+.bigWig view=PlusRawSignal; bioRep=184; cell=HUASMC; donorId=2022904.2P; labExpId=SID38214; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_BD1NTFACXX_6.bam view=Alignments; bioRep=184; cell=HUASMC; donorId=2022904.2P; labExpId=SID38214; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_BD1NTFACXX_6_2.txt.gz view=FastqRd2; bioRep=184; cell=HUASMC; donorId=2022904.2P; labExpId=SID38214; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_BD1NTFACXX_1.spikeins.bam view=Spikeins; bioRep=179; cell=HTEpC; donorId=9082701.11P; labExpId=SID38209; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_BD1NTFACXX_1_1.txt.gz view=FastqRd1; bioRep=179; cell=HTEpC; donorId=9082701.11P; labExpId=SID38209; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_BD1NTFACXX_1_strand-.bigWig view=MinusRawSignal; bioRep=179; cell=HTEpC; donorId=9082701.11P; labExpId=SID38209; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_BD1NTFACXX_1_strand+.bigWig view=PlusRawSignal; bioRep=179; cell=HTEpC; donorId=9082701.11P; labExpId=SID38209; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_BD1NTFACXX_1.bam view=Alignments; bioRep=179; cell=HTEpC; donorId=9082701.11P; labExpId=SID38209; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_BD1NTFACXX_1_2.txt.gz view=FastqRd2; bioRep=179; cell=HTEpC; donorId=9082701.11P; labExpId=SID38209; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193-SID38194_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=161,162; cell=HDLEC; donorId=8022602.1P,9120907.3P; labExpId=SID38193,SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_SID38194_SJ.bed view=Junctions; bioRep=161,162; cell=HDLEC; donorId=8022602.1P,9120907.3P; labExpId=SID38193,SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193-SID38194_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=161,162; cell=HDLEC; donorId=8022602.1P,9120907.3P; labExpId=SID38193,SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193-SID38194_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=161,162; cell=HDLEC; donorId=8022602.1P,9120907.3P; labExpId=SID38193,SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_SID38194_Contig.bed view=Contigs; bioRep=161,162; cell=HDLEC; donorId=8022602.1P,9120907.3P; labExpId=SID38193,SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244-SID38245_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=142,143; cell=HBdMEC; donorId=6082301.17P,7032704.11P; labExpId=SID38244,SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_SID38245_SJ.bed view=Junctions; bioRep=142,143; cell=HBdMEC; donorId=6082301.17P,7032704.11P; labExpId=SID38244,SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244-SID38245_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=142,143; cell=HBdMEC; donorId=6082301.17P,7032704.11P; labExpId=SID38244,SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244-SID38245_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=142,143; cell=HBdMEC; donorId=6082301.17P,7032704.11P; labExpId=SID38244,SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_SID38245_Contig.bed view=Contigs; bioRep=142,143; cell=HBdMEC; donorId=6082301.17P,7032704.11P; labExpId=SID38244,SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_BC1HH9ACXX_1.spikeins.bam view=Spikeins; bioRep=161; cell=HDLEC; donorId=8022602.1P; labExpId=SID38193; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_BC1HH9ACXX_1_1.txt.gz view=FastqRd1; bioRep=161; cell=HDLEC; donorId=8022602.1P; labExpId=SID38193; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_BC1HH9ACXX_1_strand-.bigWig view=MinusRawSignal; bioRep=161; cell=HDLEC; donorId=8022602.1P; labExpId=SID38193; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_BC1HH9ACXX_1_strand+.bigWig view=PlusRawSignal; bioRep=161; cell=HDLEC; donorId=8022602.1P; labExpId=SID38193; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_BC1HH9ACXX_1.bam view=Alignments; bioRep=161; cell=HDLEC; donorId=8022602.1P; labExpId=SID38193; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38193_BC1HH9ACXX_1_2.txt.gz view=FastqRd2; bioRep=161; cell=HDLEC; donorId=8022602.1P; labExpId=SID38193; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209-SID38208_TranscriptGencV10.idr.RPKM.gtf protocol=.; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; labProtocolId=.; replicate=1,2; view=TranscriptGencV10; labExpId=SID38208,SID38209; cell=HTEpC; rnaExtract=total; spikeInPool=Ambion; donorId=8121902.11P,9082701.11P; lab=CSHL; bioRep=178,179; type=gtf; localization=cell; dateProcessed=20130222; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_SID38208_SJ.bed protocol=.; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; labProtocolId=.; replicate=1,2; view=Junctions; labExpId=SID38208,SID38209; cell=HTEpC; rnaExtract=total; spikeInPool=Ambion; donorId=8121902.11P,9082701.11P; lab=CSHL; bioRep=178,179; type=bed; localization=cell; dateProcessed=20130222; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209-SID38208_GeneGencV10.idr.RPKM.gff protocol=.; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; labProtocolId=.; replicate=1,2; view=GeneGencV10; labExpId=SID38208,SID38209; cell=HTEpC; rnaExtract=total; spikeInPool=Ambion; donorId=8121902.11P,9082701.11P; lab=CSHL; bioRep=178,179; type=gff; localization=cell; dateProcessed=20130222; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209-SID38208_ExonsGencV10.idr.RPKM.gff protocol=.; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; labProtocolId=.; replicate=1,2; view=ExonsGencV10; labExpId=SID38208,SID38209; cell=HTEpC; rnaExtract=total; spikeInPool=Ambion; donorId=8121902.11P,9082701.11P; lab=CSHL; bioRep=178,179; type=gff; localization=cell; dateProcessed=20130222; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38209_SID38208_Contig.bed protocol=.; seqPlatform=Illumina_HiSeq_2000; dataType=RnaSeq; readType=2x101D; labProtocolId=.; replicate=1,2; view=Contigs; labExpId=SID38208,SID38209; cell=HTEpC; rnaExtract=total; spikeInPool=Ambion; donorId=8121902.11P,9082701.11P; lab=CSHL; bioRep=178,179; type=bed; localization=cell; dateProcessed=20130222; labVersion=iIDR; grant=Gingeras; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_AD1LV3ACXX_5.spikeins.bam view=Spikeins; bioRep=146; cell=HBEpC; donorId=9082701.10P; labExpId=SID38222; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_AD1LV3ACXX_5_1.txt.gz view=FastqRd1; bioRep=146; cell=HBEpC; donorId=9082701.10P; labExpId=SID38222; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_AD1LV3ACXX_5_strand-.bigWig view=MinusRawSignal; bioRep=146; cell=HBEpC; donorId=9082701.10P; labExpId=SID38222; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_AD1LV3ACXX_5_strand+.bigWig view=PlusRawSignal; bioRep=146; cell=HBEpC; donorId=9082701.10P; labExpId=SID38222; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_AD1LV3ACXX_5.bam view=Alignments; bioRep=146; cell=HBEpC; donorId=9082701.10P; labExpId=SID38222; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_AD1LV3ACXX_5_2.txt.gz view=FastqRd2; bioRep=146; cell=HBEpC; donorId=9082701.10P; labExpId=SID38222; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214-SID38215_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=184,185; cell=HUASMC; donorId=2022904.2P,2022903.1P; labExpId=SID38214,SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_SID38215_SJ.bed view=Junctions; bioRep=184,185; cell=HUASMC; donorId=2022904.2P,2022903.1P; labExpId=SID38214,SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214-SID38215_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=184,185; cell=HUASMC; donorId=2022904.2P,2022903.1P; labExpId=SID38214,SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214-SID38215_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=184,185; cell=HUASMC; donorId=2022904.2P,2022903.1P; labExpId=SID38214,SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38214_SID38215_Contig.bed view=Contigs; bioRep=184,185; cell=HUASMC; donorId=2022904.2P,2022903.1P; labExpId=SID38214,SID38215; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38203_AC1GFUACXX_3.spikeins.bam view=Spikeins; bioRep=155; cell=HCM; donorId=1051601.8P; labExpId=SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38203_AC1GFUACXX_3_1.txt.gz view=FastqRd1; bioRep=155; cell=HCM; donorId=1051601.8P; labExpId=SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38203_AC1GFUACXX_3_strand-.bigWig view=MinusRawSignal; bioRep=155; cell=HCM; donorId=1051601.8P; labExpId=SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38203_AC1GFUACXX_3_strand+.bigWig view=PlusRawSignal; bioRep=155; cell=HCM; donorId=1051601.8P; labExpId=SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38203_AC1GFUACXX_3.bam view=Alignments; bioRep=155; cell=HCM; donorId=1051601.8P; labExpId=SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38203_AC1GFUACXX_3_2.txt.gz view=FastqRd2; bioRep=155; cell=HCM; donorId=1051601.8P; labExpId=SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220-SID38221_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=144,145; cell=HBdSMC; donorId=0020301.19P,6040504.17P; labExpId=SID38220,SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_SID38221_SJ.bed view=Junctions; bioRep=144,145; cell=HBdSMC; donorId=0020301.19P,6040504.17P; labExpId=SID38220,SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220-SID38221_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=144,145; cell=HBdSMC; donorId=0020301.19P,6040504.17P; labExpId=SID38220,SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220-SID38221_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=144,145; cell=HBdSMC; donorId=0020301.19P,6040504.17P; labExpId=SID38220,SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_SID38221_Contig.bed view=Contigs; bioRep=144,145; cell=HBdSMC; donorId=0020301.19P,6040504.17P; labExpId=SID38220,SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38233_AD1RBLACXX_2.spikeins.bam view=Spikeins; bioRep=151; cell=HCAEC; donorId=8112001.23P; labExpId=SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38233_AD1RBLACXX_2_1.txt.gz view=FastqRd1; bioRep=151; cell=HCAEC; donorId=8112001.23P; labExpId=SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38233_AD1RBLACXX_2_strand-.bigWig view=MinusRawSignal; bioRep=151; cell=HCAEC; donorId=8112001.23P; labExpId=SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38233_AD1RBLACXX_2_strand+.bigWig view=PlusRawSignal; bioRep=151; cell=HCAEC; donorId=8112001.23P; labExpId=SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38233_AD1RBLACXX_2.bam view=Alignments; bioRep=151; cell=HCAEC; donorId=8112001.23P; labExpId=SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38233_AD1RBLACXX_2_2.txt.gz view=FastqRd2; bioRep=151; cell=HCAEC; donorId=8112001.23P; labExpId=SID38233; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230-SID38231_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=148,149; cell=HBSMC; donorId=0032410.15P,9062902.29P; labExpId=SID38230,SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_SID38231_SJ.bed view=Junctions; bioRep=148,149; cell=HBSMC; donorId=0032410.15P,9062902.29P; labExpId=SID38230,SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230-SID38231_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=148,149; cell=HBSMC; donorId=0032410.15P,9062902.29P; labExpId=SID38230,SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230-SID38231_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=148,149; cell=HBSMC; donorId=0032410.15P,9062902.29P; labExpId=SID38230,SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_SID38231_Contig.bed view=Contigs; bioRep=148,149; cell=HBSMC; donorId=0032410.15P,9062902.29P; labExpId=SID38230,SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38239_AC1GKKACXX_4.spikeins.bam view=Spikeins; bioRep=173; cell=HPF; donorId=9022003.7P; labExpId=SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38239_AC1GKKACXX_4_1.txt.gz view=FastqRd1; bioRep=173; cell=HPF; donorId=9022003.7P; labExpId=SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38239_AC1GKKACXX_4_strand-.bigWig view=MinusRawSignal; bioRep=173; cell=HPF; donorId=9022003.7P; labExpId=SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38239_AC1GKKACXX_4_strand+.bigWig view=PlusRawSignal; bioRep=173; cell=HPF; donorId=9022003.7P; labExpId=SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38239_AC1GKKACXX_4.bam view=Alignments; bioRep=173; cell=HPF; donorId=9022003.7P; labExpId=SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38239_AC1GKKACXX_4_2.txt.gz view=FastqRd2; bioRep=173; cell=HPF; donorId=9022003.7P; labExpId=SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204-SID38205_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=158,159; cell=HDBEC; donorId=7060606.1P,9052704P; labExpId=SID38204,SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_SID38205_SJ.bed view=Junctions; bioRep=158,159; cell=HDBEC; donorId=7060606.1P,9052704P; labExpId=SID38204,SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204-SID38205_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=158,159; cell=HDBEC; donorId=7060606.1P,9052704P; labExpId=SID38204,SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204-SID38205_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=158,159; cell=HDBEC; donorId=7060606.1P,9052704P; labExpId=SID38204,SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_SID38205_Contig.bed view=Contigs; bioRep=158,159; cell=HDBEC; donorId=7060606.1P,9052704P; labExpId=SID38204,SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240-SID38241_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=174,175; cell=HPMEC; donorId=1062901P,9090301P; labExpId=SID38240,SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_SID38241_SJ.bed view=Junctions; bioRep=174,175; cell=HPMEC; donorId=1062901P,9090301P; labExpId=SID38240,SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240-SID38241_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=174,175; cell=HPMEC; donorId=1062901P,9090301P; labExpId=SID38240,SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240-SID38241_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=174,175; cell=HPMEC; donorId=1062901P,9090301P; labExpId=SID38240,SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_SID38241_Contig.bed view=Contigs; bioRep=174,175; cell=HPMEC; donorId=1062901P,9090301P; labExpId=SID38240,SID38241; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_AC1GKKACXX_5.spikeins.bam view=Spikeins; bioRep=174; cell=HPMEC; donorId=1062901P; labExpId=SID38240; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_AC1GKKACXX_5_1.txt.gz view=FastqRd1; bioRep=174; cell=HPMEC; donorId=1062901P; labExpId=SID38240; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_AC1GKKACXX_5_strand-.bigWig view=MinusRawSignal; bioRep=174; cell=HPMEC; donorId=1062901P; labExpId=SID38240; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_AC1GKKACXX_5_strand+.bigWig view=PlusRawSignal; bioRep=174; cell=HPMEC; donorId=1062901P; labExpId=SID38240; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_AC1GKKACXX_5.bam view=Alignments; bioRep=174; cell=HPMEC; donorId=1062901P; labExpId=SID38240; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38240_AC1GKKACXX_5_2.txt.gz view=FastqRd2; bioRep=174; cell=HPMEC; donorId=1062901P; labExpId=SID38240; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38196_BC1HH9ACXX_4.spikeins.bam view=Spikeins; bioRep=165; cell=HDMEC; donorId=9110305P; labExpId=SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38196_BC1HH9ACXX_4_1.txt.gz view=FastqRd1; bioRep=165; cell=HDMEC; donorId=9110305P; labExpId=SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38196_BC1HH9ACXX_4_strand-.bigWig view=MinusRawSignal; bioRep=165; cell=HDMEC; donorId=9110305P; labExpId=SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38196_BC1HH9ACXX_4_strand+.bigWig view=PlusRawSignal; bioRep=165; cell=HDMEC; donorId=9110305P; labExpId=SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38196_BC1HH9ACXX_4.bam view=Alignments; bioRep=165; cell=HDMEC; donorId=9110305P; labExpId=SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38196_BC1HH9ACXX_4_2.txt.gz view=FastqRd2; bioRep=165; cell=HDMEC; donorId=9110305P; labExpId=SID38196; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_BD1NTFACXX_4.spikeins.bam view=Spikeins; bioRep=182; cell=HUAEC; donorId=8061702.1P; labExpId=SID38212; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_BD1NTFACXX_4_1.txt.gz view=FastqRd1; bioRep=182; cell=HUAEC; donorId=8061702.1P; labExpId=SID38212; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_BD1NTFACXX_4_strand-.bigWig view=MinusRawSignal; bioRep=182; cell=HUAEC; donorId=8061702.1P; labExpId=SID38212; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_BD1NTFACXX_4_strand+.bigWig view=PlusRawSignal; bioRep=182; cell=HUAEC; donorId=8061702.1P; labExpId=SID38212; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_BD1NTFACXX_4.bam view=Alignments; bioRep=182; cell=HUAEC; donorId=8061702.1P; labExpId=SID38212; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_BD1NTFACXX_4_2.txt.gz view=FastqRd2; bioRep=182; cell=HUAEC; donorId=8061702.1P; labExpId=SID38212; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_BD1NTFACXX_8.spikeins.bam view=Spikeins; bioRep=186; cell=HUtSMC; donorId=8030602.2P; labExpId=SID38216; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_BD1NTFACXX_8_1.txt.gz view=FastqRd1; bioRep=186; cell=HUtSMC; donorId=8030602.2P; labExpId=SID38216; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_BD1NTFACXX_8_strand-.bigWig view=MinusRawSignal; bioRep=186; cell=HUtSMC; donorId=8030602.2P; labExpId=SID38216; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_BD1NTFACXX_8_strand+.bigWig view=PlusRawSignal; bioRep=186; cell=HUtSMC; donorId=8030602.2P; labExpId=SID38216; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_BD1NTFACXX_8.bam view=Alignments; bioRep=186; cell=HUtSMC; donorId=8030602.2P; labExpId=SID38216; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_BD1NTFACXX_8_2.txt.gz view=FastqRd2; bioRep=186; cell=HUtSMC; donorId=8030602.2P; labExpId=SID38216; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224-SID38225_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=166,167; cell=HNEpC; donorId=1032402.1P,9102102P; labExpId=SID38224,SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_SID38225_SJ.bed view=Junctions; bioRep=166,167; cell=HNEpC; donorId=1032402.1P,9102102P; labExpId=SID38224,SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224-SID38225_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=166,167; cell=HNEpC; donorId=1032402.1P,9102102P; labExpId=SID38224,SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224-SID38225_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=166,167; cell=HNEpC; donorId=1032402.1P,9102102P; labExpId=SID38224,SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_SID38225_Contig.bed view=Contigs; bioRep=166,167; cell=HNEpC; donorId=1032402.1P,9102102P; labExpId=SID38224,SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38194_BC1HH9ACXX_2.spikeins.bam view=Spikeins; bioRep=162; cell=HDLEC; donorId=9120907.3P; labExpId=SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38194_BC1HH9ACXX_2_1.txt.gz view=FastqRd1; bioRep=162; cell=HDLEC; donorId=9120907.3P; labExpId=SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38194_BC1HH9ACXX_2_strand-.bigWig view=MinusRawSignal; bioRep=162; cell=HDLEC; donorId=9120907.3P; labExpId=SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38194_BC1HH9ACXX_2_strand+.bigWig view=PlusRawSignal; bioRep=162; cell=HDLEC; donorId=9120907.3P; labExpId=SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38194_BC1HH9ACXX_2.bam view=Alignments; bioRep=162; cell=HDLEC; donorId=9120907.3P; labExpId=SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38194_BC1HH9ACXX_2_2.txt.gz view=FastqRd2; bioRep=162; cell=HDLEC; donorId=9120907.3P; labExpId=SID38194; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_BC1HH9ACXX_3.spikeins.bam view=Spikeins; bioRep=164; cell=HDMEC; donorId=9110304P; labExpId=SID38195; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_BC1HH9ACXX_3_1.txt.gz view=FastqRd1; bioRep=164; cell=HDMEC; donorId=9110304P; labExpId=SID38195; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_BC1HH9ACXX_3_strand-.bigWig view=MinusRawSignal; bioRep=164; cell=HDMEC; donorId=9110304P; labExpId=SID38195; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_BC1HH9ACXX_3_strand+.bigWig view=PlusRawSignal; bioRep=164; cell=HDMEC; donorId=9110304P; labExpId=SID38195; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_BC1HH9ACXX_3.bam view=Alignments; bioRep=164; cell=HDMEC; donorId=9110304P; labExpId=SID38195; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38195_BC1HH9ACXX_3_2.txt.gz view=FastqRd2; bioRep=164; cell=HDMEC; donorId=9110304P; labExpId=SID38195; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234-SID38235_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=152,153; cell=HCASMC; donorId=1020301.7,8072501.3P; labExpId=SID38234,SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_SID38235_SJ.bed view=Junctions; bioRep=152,153; cell=HCASMC; donorId=1020301.7,8072501.3P; labExpId=SID38234,SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234-SID38235_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=152,153; cell=HCASMC; donorId=1020301.7,8072501.3P; labExpId=SID38234,SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234-SID38235_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=152,153; cell=HCASMC; donorId=1020301.7,8072501.3P; labExpId=SID38234,SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_SID38235_Contig.bed view=Contigs; bioRep=152,153; cell=HCASMC; donorId=1020301.7,8072501.3P; labExpId=SID38234,SID38235; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38207_AC1GFUACXX_7.spikeins.bam view=Spikeins; bioRep=177; cell=HRCEpC; donorId=7101503.15P; labExpId=SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38207_AC1GFUACXX_7_1.txt.gz view=FastqRd1; bioRep=177; cell=HRCEpC; donorId=7101503.15P; labExpId=SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38207_AC1GFUACXX_7_strand-.bigWig view=MinusRawSignal; bioRep=177; cell=HRCEpC; donorId=7101503.15P; labExpId=SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38207_AC1GFUACXX_7_strand+.bigWig view=PlusRawSignal; bioRep=177; cell=HRCEpC; donorId=7101503.15P; labExpId=SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38207_AC1GFUACXX_7.bam view=Alignments; bioRep=177; cell=HRCEpC; donorId=7101503.15P; labExpId=SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38207_AC1GFUACXX_7_2.txt.gz view=FastqRd2; bioRep=177; cell=HRCEpC; donorId=7101503.15P; labExpId=SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38231_AD1LV3ACXX_8.spikeins.bam view=Spikeins; bioRep=149; cell=HBSMC; donorId=9062902.29P; labExpId=SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38231_AD1LV3ACXX_8_1.txt.gz view=FastqRd1; bioRep=149; cell=HBSMC; donorId=9062902.29P; labExpId=SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38231_AD1LV3ACXX_8_strand-.bigWig view=MinusRawSignal; bioRep=149; cell=HBSMC; donorId=9062902.29P; labExpId=SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38231_AD1LV3ACXX_8_strand+.bigWig view=PlusRawSignal; bioRep=149; cell=HBSMC; donorId=9062902.29P; labExpId=SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38231_AD1LV3ACXX_8.bam view=Alignments; bioRep=149; cell=HBSMC; donorId=9062902.29P; labExpId=SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38231_AD1LV3ACXX_8_2.txt.gz view=FastqRd2; bioRep=149; cell=HBSMC; donorId=9062902.29P; labExpId=SID38231; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38205_AC1GFUACXX_5.spikeins.bam view=Spikeins; bioRep=159; cell=HDBEC; donorId=9052704P; labExpId=SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38205_AC1GFUACXX_5_1.txt.gz view=FastqRd1; bioRep=159; cell=HDBEC; donorId=9052704P; labExpId=SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38205_AC1GFUACXX_5_strand-.bigWig view=MinusRawSignal; bioRep=159; cell=HDBEC; donorId=9052704P; labExpId=SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38205_AC1GFUACXX_5_strand+.bigWig view=PlusRawSignal; bioRep=159; cell=HDBEC; donorId=9052704P; labExpId=SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38205_AC1GFUACXX_5.bam view=Alignments; bioRep=159; cell=HDBEC; donorId=9052704P; labExpId=SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38205_AC1GFUACXX_5_2.txt.gz view=FastqRd2; bioRep=159; cell=HDBEC; donorId=9052704P; labExpId=SID38205; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_AD1LV3ACXX_3.spikeins.bam view=Spikeins; bioRep=144; cell=HBdSMC; donorId=0020301.19P; labExpId=SID38220; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_AD1LV3ACXX_3_1.txt.gz view=FastqRd1; bioRep=144; cell=HBdSMC; donorId=0020301.19P; labExpId=SID38220; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_AD1LV3ACXX_3_strand-.bigWig view=MinusRawSignal; bioRep=144; cell=HBdSMC; donorId=0020301.19P; labExpId=SID38220; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_AD1LV3ACXX_3_strand+.bigWig view=PlusRawSignal; bioRep=144; cell=HBdSMC; donorId=0020301.19P; labExpId=SID38220; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_AD1LV3ACXX_3.bam view=Alignments; bioRep=144; cell=HBdSMC; donorId=0020301.19P; labExpId=SID38220; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38220_AD1LV3ACXX_3_2.txt.gz view=FastqRd2; bioRep=144; cell=HBdSMC; donorId=0020301.19P; labExpId=SID38220; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38243_AC1GKKACXX_8.spikeins.bam view=Spikeins; bioRep=141; cell=HAoSMC; donorId=9052004.2P; labExpId=SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38243_AC1GKKACXX_8_1.txt.gz view=FastqRd1; bioRep=141; cell=HAoSMC; donorId=9052004.2P; labExpId=SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38243_AC1GKKACXX_8_strand-.bigWig view=MinusRawSignal; bioRep=141; cell=HAoSMC; donorId=9052004.2P; labExpId=SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38243_AC1GKKACXX_8_strand+.bigWig view=PlusRawSignal; bioRep=141; cell=HAoSMC; donorId=9052004.2P; labExpId=SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38243_AC1GKKACXX_8.bam view=Alignments; bioRep=141; cell=HAoSMC; donorId=9052004.2P; labExpId=SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38243_AC1GKKACXX_8_2.txt.gz view=FastqRd2; bioRep=141; cell=HAoSMC; donorId=9052004.2P; labExpId=SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38208_AC1GFUACXX_8.spikeins.bam view=Spikeins; bioRep=178; cell=HTEpC; donorId=8121902.11P; labExpId=SID38208; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38208_AC1GFUACXX_8_1.txt.gz view=FastqRd1; bioRep=178; cell=HTEpC; donorId=8121902.11P; labExpId=SID38208; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38208_AC1GFUACXX_8_strand-.bigWig view=MinusRawSignal; bioRep=178; cell=HTEpC; donorId=8121902.11P; labExpId=SID38208; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38208_AC1GFUACXX_8_strand+.bigWig view=PlusRawSignal; bioRep=178; cell=HTEpC; donorId=8121902.11P; labExpId=SID38208; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38208_AC1GFUACXX_8.bam view=Alignments; bioRep=178; cell=HTEpC; donorId=8121902.11P; labExpId=SID38208; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38208_AC1GFUACXX_8_2.txt.gz view=FastqRd2; bioRep=178; cell=HTEpC; donorId=8121902.11P; labExpId=SID38208; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_AD1LV3ACXX_1.spikeins.bam view=Spikeins; bioRep=142; cell=HBdMEC; donorId=6082301.17P; labExpId=SID38244; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_AD1LV3ACXX_1_1.txt.gz view=FastqRd1; bioRep=142; cell=HBdMEC; donorId=6082301.17P; labExpId=SID38244; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_AD1LV3ACXX_1_strand-.bigWig view=MinusRawSignal; bioRep=142; cell=HBdMEC; donorId=6082301.17P; labExpId=SID38244; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_AD1LV3ACXX_1_strand+.bigWig view=PlusRawSignal; bioRep=142; cell=HBdMEC; donorId=6082301.17P; labExpId=SID38244; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_AD1LV3ACXX_1.bam view=Alignments; bioRep=142; cell=HBdMEC; donorId=6082301.17P; labExpId=SID38244; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38244_AD1LV3ACXX_1_2.txt.gz view=FastqRd2; bioRep=142; cell=HBdMEC; donorId=6082301.17P; labExpId=SID38244; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_AD1LV3ACXX_7.spikeins.bam view=Spikeins; bioRep=148; cell=HBSMC; donorId=0032410.15P; labExpId=SID38230; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_AD1LV3ACXX_7_1.txt.gz view=FastqRd1; bioRep=148; cell=HBSMC; donorId=0032410.15P; labExpId=SID38230; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_AD1LV3ACXX_7_strand-.bigWig view=MinusRawSignal; bioRep=148; cell=HBSMC; donorId=0032410.15P; labExpId=SID38230; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_AD1LV3ACXX_7_strand+.bigWig view=PlusRawSignal; bioRep=148; cell=HBSMC; donorId=0032410.15P; labExpId=SID38230; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_AD1LV3ACXX_7.bam view=Alignments; bioRep=148; cell=HBSMC; donorId=0032410.15P; labExpId=SID38230; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38230_AD1LV3ACXX_7_2.txt.gz view=FastqRd2; bioRep=148; cell=HBSMC; donorId=0032410.15P; labExpId=SID38230; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_AC1GFUACXX_2.spikeins.bam view=Spikeins; bioRep=154; cell=HCM; donorId=1042702.5P; labExpId=SID38202; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_AC1GFUACXX_2_1.txt.gz view=FastqRd1; bioRep=154; cell=HCM; donorId=1042702.5P; labExpId=SID38202; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_AC1GFUACXX_2_strand-.bigWig view=MinusRawSignal; bioRep=154; cell=HCM; donorId=1042702.5P; labExpId=SID38202; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_AC1GFUACXX_2_strand+.bigWig view=PlusRawSignal; bioRep=154; cell=HCM; donorId=1042702.5P; labExpId=SID38202; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_AC1GFUACXX_2.bam view=Alignments; bioRep=154; cell=HCM; donorId=1042702.5P; labExpId=SID38202; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_AC1GFUACXX_2_2.txt.gz view=FastqRd2; bioRep=154; cell=HCM; donorId=1042702.5P; labExpId=SID38202; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38223_AD1LV3ACXX_6.spikeins.bam view=Spikeins; bioRep=147; cell=HBEpC; donorId=9102601.3P; labExpId=SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38223_AD1LV3ACXX_6_1.txt.gz view=FastqRd1; bioRep=147; cell=HBEpC; donorId=9102601.3P; labExpId=SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38223_AD1LV3ACXX_6_strand-.bigWig view=MinusRawSignal; bioRep=147; cell=HBEpC; donorId=9102601.3P; labExpId=SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38223_AD1LV3ACXX_6_strand+.bigWig view=PlusRawSignal; bioRep=147; cell=HBEpC; donorId=9102601.3P; labExpId=SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38223_AD1LV3ACXX_6.bam view=Alignments; bioRep=147; cell=HBEpC; donorId=9102601.3P; labExpId=SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38223_AD1LV3ACXX_6_2.txt.gz view=FastqRd2; bioRep=147; cell=HBEpC; donorId=9102601.3P; labExpId=SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_AD1RBLACXX_1.spikeins.bam view=Spikeins; bioRep=150; cell=HCAEC; donorId=2061201.1P; labExpId=SID38232; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_AD1RBLACXX_1_1.txt.gz view=FastqRd1; bioRep=150; cell=HCAEC; donorId=2061201.1P; labExpId=SID38232; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_AD1RBLACXX_1_strand-.bigWig view=MinusRawSignal; bioRep=150; cell=HCAEC; donorId=2061201.1P; labExpId=SID38232; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_AD1RBLACXX_1_strand+.bigWig view=PlusRawSignal; bioRep=150; cell=HCAEC; donorId=2061201.1P; labExpId=SID38232; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_AD1RBLACXX_1.bam view=Alignments; bioRep=150; cell=HCAEC; donorId=2061201.1P; labExpId=SID38232; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38232_AD1RBLACXX_1_2.txt.gz view=FastqRd2; bioRep=150; cell=HCAEC; donorId=2061201.1P; labExpId=SID38232; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_AD1RBLACXX_3.spikeins.bam view=Spikeins; bioRep=152; cell=HCASMC; donorId=1020301.7; labExpId=SID38234; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_AD1RBLACXX_3_1.txt.gz view=FastqRd1; bioRep=152; cell=HCASMC; donorId=1020301.7; labExpId=SID38234; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_AD1RBLACXX_3_strand-.bigWig view=MinusRawSignal; bioRep=152; cell=HCASMC; donorId=1020301.7; labExpId=SID38234; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_AD1RBLACXX_3_strand+.bigWig view=PlusRawSignal; bioRep=152; cell=HCASMC; donorId=1020301.7; labExpId=SID38234; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_AD1RBLACXX_3.bam view=Alignments; bioRep=152; cell=HCASMC; donorId=1020301.7; labExpId=SID38234; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38234_AD1RBLACXX_3_2.txt.gz view=FastqRd2; bioRep=152; cell=HCASMC; donorId=1020301.7; labExpId=SID38234; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222-SID38223_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=146,147; cell=HBEpC; donorId=9082701.10P,9102601.3P; labExpId=SID38222,SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_SID38223_SJ.bed view=Junctions; bioRep=146,147; cell=HBEpC; donorId=9082701.10P,9102601.3P; labExpId=SID38222,SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222-SID38223_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=146,147; cell=HBEpC; donorId=9082701.10P,9102601.3P; labExpId=SID38222,SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222-SID38223_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=146,147; cell=HBEpC; donorId=9082701.10P,9102601.3P; labExpId=SID38222,SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38222_SID38223_Contig.bed view=Contigs; bioRep=146,147; cell=HBEpC; donorId=9082701.10P,9102601.3P; labExpId=SID38222,SID38223; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242-SID38243_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=140,141; cell=HAoSMC; donorId=8121902.2P,9052004.2P; labExpId=SID38242,SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_SID38243_SJ.bed view=Junctions; bioRep=140,141; cell=HAoSMC; donorId=8121902.2P,9052004.2P; labExpId=SID38242,SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242-SID38243_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=140,141; cell=HAoSMC; donorId=8121902.2P,9052004.2P; labExpId=SID38242,SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242-SID38243_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=140,141; cell=HAoSMC; donorId=8121902.2P,9052004.2P; labExpId=SID38242,SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_SID38243_Contig.bed view=Contigs; bioRep=140,141; cell=HAoSMC; donorId=8121902.2P,9052004.2P; labExpId=SID38242,SID38243; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38213_BD1NTFACXX_5.spikeins.bam view=Spikeins; bioRep=183; cell=HUAEC; donorId=1071107.2P; labExpId=SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38213_BD1NTFACXX_5_1.txt.gz view=FastqRd1; bioRep=183; cell=HUAEC; donorId=1071107.2P; labExpId=SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38213_BD1NTFACXX_5_strand-.bigWig view=MinusRawSignal; bioRep=183; cell=HUAEC; donorId=1071107.2P; labExpId=SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38213_BD1NTFACXX_5_strand+.bigWig view=PlusRawSignal; bioRep=183; cell=HUAEC; donorId=1071107.2P; labExpId=SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38213_BD1NTFACXX_5.bam view=Alignments; bioRep=183; cell=HUAEC; donorId=1071107.2P; labExpId=SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38213_BD1NTFACXX_5_2.txt.gz view=FastqRd2; bioRep=183; cell=HUAEC; donorId=1071107.2P; labExpId=SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206-SID38207_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=176,177; cell=HRCEpC; donorId=0050702.22P,7101503.15P; labExpId=SID38206,SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_SID38207_SJ.bed view=Junctions; bioRep=176,177; cell=HRCEpC; donorId=0050702.22P,7101503.15P; labExpId=SID38206,SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206-SID38207_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=176,177; cell=HRCEpC; donorId=0050702.22P,7101503.15P; labExpId=SID38206,SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206-SID38207_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=176,177; cell=HRCEpC; donorId=0050702.22P,7101503.15P; labExpId=SID38206,SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_SID38207_Contig.bed view=Contigs; bioRep=176,177; cell=HRCEpC; donorId=0050702.22P,7101503.15P; labExpId=SID38206,SID38207; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_BC1HH9ACXX_7.spikeins.bam view=Spikeins; bioRep=168; cell=HPAEC; donorId=0032410.5P; labExpId=SID38226; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_BC1HH9ACXX_7_1.txt.gz view=FastqRd1; bioRep=168; cell=HPAEC; donorId=0032410.5P; labExpId=SID38226; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_BC1HH9ACXX_7_strand-.bigWig view=MinusRawSignal; bioRep=168; cell=HPAEC; donorId=0032410.5P; labExpId=SID38226; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_BC1HH9ACXX_7_strand+.bigWig view=PlusRawSignal; bioRep=168; cell=HPAEC; donorId=0032410.5P; labExpId=SID38226; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_BC1HH9ACXX_7.bam view=Alignments; bioRep=168; cell=HPAEC; donorId=0032410.5P; labExpId=SID38226; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_BC1HH9ACXX_7_2.txt.gz view=FastqRd2; bioRep=168; cell=HPAEC; donorId=0032410.5P; labExpId=SID38226; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216-SID38217_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=186,187; cell=HUtSMC; donorId=8030602.2P,8011507.2P; labExpId=SID38216,SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_SID38217_SJ.bed view=Junctions; bioRep=186,187; cell=HUtSMC; donorId=8030602.2P,8011507.2P; labExpId=SID38216,SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216-SID38217_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=186,187; cell=HUtSMC; donorId=8030602.2P,8011507.2P; labExpId=SID38216,SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216-SID38217_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=186,187; cell=HUtSMC; donorId=8030602.2P,8011507.2P; labExpId=SID38216,SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38216_SID38217_Contig.bed view=Contigs; bioRep=186,187; cell=HUtSMC; donorId=8030602.2P,8011507.2P; labExpId=SID38216,SID38217; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202-SID38203_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=154,155; cell=HCM; donorId=1042702.5P,1051601.8P; labExpId=SID38202,SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_SID38203_SJ.bed view=Junctions; bioRep=154,155; cell=HCM; donorId=1042702.5P,1051601.8P; labExpId=SID38202,SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202-SID38203_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=154,155; cell=HCM; donorId=1042702.5P,1051601.8P; labExpId=SID38202,SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202-SID38203_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=154,155; cell=HCM; donorId=1042702.5P,1051601.8P; labExpId=SID38202,SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38202_SID38203_Contig.bed view=Contigs; bioRep=154,155; cell=HCM; donorId=1042702.5P,1051601.8P; labExpId=SID38202,SID38203; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38221_AD1LV3ACXX_4.spikeins.bam view=Spikeins; bioRep=145; cell=HBdSMC; donorId=6040504.17P; labExpId=SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38221_AD1LV3ACXX_4_1.txt.gz view=FastqRd1; bioRep=145; cell=HBdSMC; donorId=6040504.17P; labExpId=SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38221_AD1LV3ACXX_4_strand-.bigWig view=MinusRawSignal; bioRep=145; cell=HBdSMC; donorId=6040504.17P; labExpId=SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38221_AD1LV3ACXX_4_strand+.bigWig view=PlusRawSignal; bioRep=145; cell=HBdSMC; donorId=6040504.17P; labExpId=SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38221_AD1LV3ACXX_4.bam view=Alignments; bioRep=145; cell=HBdSMC; donorId=6040504.17P; labExpId=SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38221_AD1LV3ACXX_4_2.txt.gz view=FastqRd2; bioRep=145; cell=HBdSMC; donorId=6040504.17P; labExpId=SID38221; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_AC1GKKACXX_7.spikeins.bam view=Spikeins; bioRep=140; cell=HAoSMC; donorId=8121902.2P; labExpId=SID38242; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_AC1GKKACXX_7_1.txt.gz view=FastqRd1; bioRep=140; cell=HAoSMC; donorId=8121902.2P; labExpId=SID38242; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_AC1GKKACXX_7_strand-.bigWig view=MinusRawSignal; bioRep=140; cell=HAoSMC; donorId=8121902.2P; labExpId=SID38242; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_AC1GKKACXX_7_strand+.bigWig view=PlusRawSignal; bioRep=140; cell=HAoSMC; donorId=8121902.2P; labExpId=SID38242; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_AC1GKKACXX_7.bam view=Alignments; bioRep=140; cell=HAoSMC; donorId=8121902.2P; labExpId=SID38242; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38242_AC1GKKACXX_7_2.txt.gz view=FastqRd2; bioRep=140; cell=HAoSMC; donorId=8121902.2P; labExpId=SID38242; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_AC1GKKACXX_3.spikeins.bam view=Spikeins; bioRep=172; cell=HPF; donorId=0061405.2P; labExpId=SID38238; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_AC1GKKACXX_3_1.txt.gz view=FastqRd1; bioRep=172; cell=HPF; donorId=0061405.2P; labExpId=SID38238; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_AC1GKKACXX_3_strand-.bigWig view=MinusRawSignal; bioRep=172; cell=HPF; donorId=0061405.2P; labExpId=SID38238; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_AC1GKKACXX_3_strand+.bigWig view=PlusRawSignal; bioRep=172; cell=HPF; donorId=0061405.2P; labExpId=SID38238; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_AC1GKKACXX_3.bam view=Alignments; bioRep=172; cell=HPF; donorId=0061405.2P; labExpId=SID38238; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_AC1GKKACXX_3_2.txt.gz view=FastqRd2; bioRep=172; cell=HPF; donorId=0061405.2P; labExpId=SID38238; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238-SID38239_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=172,173; cell=HPF; donorId=0061405.2P,9022003.7P; labExpId=SID38238,SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_SID38239_SJ.bed view=Junctions; bioRep=172,173; cell=HPF; donorId=0061405.2P,9022003.7P; labExpId=SID38238,SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238-SID38239_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=172,173; cell=HPF; donorId=0061405.2P,9022003.7P; labExpId=SID38238,SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238-SID38239_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=172,173; cell=HPF; donorId=0061405.2P,9022003.7P; labExpId=SID38238,SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38238_SID38239_Contig.bed view=Contigs; bioRep=172,173; cell=HPF; donorId=0061405.2P,9022003.7P; labExpId=SID38238,SID38239; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38211_BD1NTFACXX_3.spikeins.bam view=Spikeins; bioRep=181; cell=HTSMC; donorId=9033101.13P; labExpId=SID38211; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38211_BD1NTFACXX_3_1.txt.gz view=FastqRd1; bioRep=181; cell=HTSMC; donorId=9033101.13P; labExpId=SID38211; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38211_BD1NTFACXX_3_strand-.bigWig view=MinusRawSignal; bioRep=181; cell=HTSMC; donorId=9033101.13P; labExpId=SID38211; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38211_BD1NTFACXX_3_strand+.bigWig view=PlusRawSignal; bioRep=181; cell=HTSMC; donorId=9033101.13P; labExpId=SID38211; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38211_BD1NTFACXX_3.bam view=Alignments; bioRep=181; cell=HTSMC; donorId=9033101.13P; labExpId=SID38211; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38211_BD1NTFACXX_3_2.txt.gz view=FastqRd2; bioRep=181; cell=HTSMC; donorId=9033101.13P; labExpId=SID38211; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212-SID38213_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=182,183; cell=HUAEC; donorId=8061702.1P,1071107.2P; labExpId=SID38212,SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_SID38213_SJ.bed view=Junctions; bioRep=182,183; cell=HUAEC; donorId=8061702.1P,1071107.2P; labExpId=SID38212,SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212-SID38213_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=182,183; cell=HUAEC; donorId=8061702.1P,1071107.2P; labExpId=SID38212,SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212-SID38213_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=182,183; cell=HUAEC; donorId=8061702.1P,1071107.2P; labExpId=SID38212,SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38212_SID38213_Contig.bed view=Contigs; bioRep=182,183; cell=HUAEC; donorId=8061702.1P,1071107.2P; labExpId=SID38212,SID38213; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38245_AD1LV3ACXX_2.spikeins.bam view=Spikeins; bioRep=143; cell=HBdMEC; donorId=7032704.11P; labExpId=SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38245_AD1LV3ACXX_2_1.txt.gz view=FastqRd1; bioRep=143; cell=HBdMEC; donorId=7032704.11P; labExpId=SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38245_AD1LV3ACXX_2_strand-.bigWig view=MinusRawSignal; bioRep=143; cell=HBdMEC; donorId=7032704.11P; labExpId=SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38245_AD1LV3ACXX_2_strand+.bigWig view=PlusRawSignal; bioRep=143; cell=HBdMEC; donorId=7032704.11P; labExpId=SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38245_AD1LV3ACXX_2.bam view=Alignments; bioRep=143; cell=HBdMEC; donorId=7032704.11P; labExpId=SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38245_AD1LV3ACXX_2_2.txt.gz view=FastqRd2; bioRep=143; cell=HBdMEC; donorId=7032704.11P; labExpId=SID38245; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_BC1HH9ACXX_5.spikeins.bam view=Spikeins; bioRep=166; cell=HNEpC; donorId=1032402.1P; labExpId=SID38224; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_BC1HH9ACXX_5_1.txt.gz view=FastqRd1; bioRep=166; cell=HNEpC; donorId=1032402.1P; labExpId=SID38224; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_BC1HH9ACXX_5_strand-.bigWig view=MinusRawSignal; bioRep=166; cell=HNEpC; donorId=1032402.1P; labExpId=SID38224; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_BC1HH9ACXX_5_strand+.bigWig view=PlusRawSignal; bioRep=166; cell=HNEpC; donorId=1032402.1P; labExpId=SID38224; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_BC1HH9ACXX_5.bam view=Alignments; bioRep=166; cell=HNEpC; donorId=1032402.1P; labExpId=SID38224; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38224_BC1HH9ACXX_5_2.txt.gz view=FastqRd2; bioRep=166; cell=HNEpC; donorId=1032402.1P; labExpId=SID38224; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_AC1GFUACXX_4.spikeins.bam view=Spikeins; bioRep=158; cell=HDBEC; donorId=7060606.1P; labExpId=SID38204; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_AC1GFUACXX_4_1.txt.gz view=FastqRd1; bioRep=158; cell=HDBEC; donorId=7060606.1P; labExpId=SID38204; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_AC1GFUACXX_4_strand-.bigWig view=MinusRawSignal; bioRep=158; cell=HDBEC; donorId=7060606.1P; labExpId=SID38204; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_AC1GFUACXX_4_strand+.bigWig view=PlusRawSignal; bioRep=158; cell=HDBEC; donorId=7060606.1P; labExpId=SID38204; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_AC1GFUACXX_4.bam view=Alignments; bioRep=158; cell=HDBEC; donorId=7060606.1P; labExpId=SID38204; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38204_AC1GFUACXX_4_2.txt.gz view=FastqRd2; bioRep=158; cell=HDBEC; donorId=7060606.1P; labExpId=SID38204; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226-SID38227_TranscriptGencV10.idr.RPKM.gtf view=TranscriptGencV10; bioRep=168,169; cell=HPAEC; donorId=0032410.5P,8033102.3P; labExpId=SID38226,SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gtf; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_SID38227_SJ.bed view=Junctions; bioRep=168,169; cell=HPAEC; donorId=0032410.5P,8033102.3P; labExpId=SID38226,SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226-SID38227_GeneGencV10.idr.RPKM.gff view=GeneGencV10; bioRep=168,169; cell=HPAEC; donorId=0032410.5P,8033102.3P; labExpId=SID38226,SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226-SID38227_ExonsGencV10.idr.RPKM.gff view=ExonsGencV10; bioRep=168,169; cell=HPAEC; donorId=0032410.5P,8033102.3P; labExpId=SID38226,SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=gff; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38226_SID38227_Contig.bed view=Contigs; bioRep=168,169; cell=HPAEC; donorId=0032410.5P,8033102.3P; labExpId=SID38226,SID38227; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1,2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bed; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38225_BC1HH9ACXX_6.spikeins.bam view=Spikeins; bioRep=167; cell=HNEpC; donorId=9102102P; labExpId=SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38225_BC1HH9ACXX_6_1.txt.gz view=FastqRd1; bioRep=167; cell=HNEpC; donorId=9102102P; labExpId=SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38225_BC1HH9ACXX_6_strand-.bigWig view=MinusRawSignal; bioRep=167; cell=HNEpC; donorId=9102102P; labExpId=SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38225_BC1HH9ACXX_6_strand+.bigWig view=PlusRawSignal; bioRep=167; cell=HNEpC; donorId=9102102P; labExpId=SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38225_BC1HH9ACXX_6.bam view=Alignments; bioRep=167; cell=HNEpC; donorId=9102102P; labExpId=SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38225_BC1HH9ACXX_6_2.txt.gz view=FastqRd2; bioRep=167; cell=HNEpC; donorId=9102102P; labExpId=SID38225; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=2; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_AC1GFUACXX_6.spikeins.bam view=Spikeins; bioRep=176; cell=HRCEpC; donorId=0050702.22P; labExpId=SID38206; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_AC1GFUACXX_6_1.txt.gz view=FastqRd1; bioRep=176; cell=HRCEpC; donorId=0050702.22P; labExpId=SID38206; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_AC1GFUACXX_6_strand-.bigWig view=MinusRawSignal; bioRep=176; cell=HRCEpC; donorId=0050702.22P; labExpId=SID38206; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_AC1GFUACXX_6_strand+.bigWig view=PlusRawSignal; bioRep=176; cell=HRCEpC; donorId=0050702.22P; labExpId=SID38206; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bigWig; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_AC1GFUACXX_6.bam view=Alignments; bioRep=176; cell=HRCEpC; donorId=0050702.22P; labExpId=SID38206; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=bam; organism=human; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlLongRnaSeq/20130218_promocell_batches1-2_minus_batch1sFASTQ/SID38206_AC1GFUACXX_6_2.txt.gz view=FastqRd2; bioRep=176; cell=HRCEpC; donorId=0050702.22P; labExpId=SID38206; labProtocolId=.; labVersion=iIDR; localization=cell; protocol=.; readType=2x101D; replicate=1; rnaExtract=total; seqPlatform=Illumina_HiSeq_2000; spikeInPool=Ambion; dateProcessed=20130222; grant=Gingeras; lab=CSHL; dataType=RnaSeq; type=fastq; organism=human;