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cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47144,LID47145; labProtocolId=26A,26B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=GeneEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/LID47144-LID47145_TranscriptEnsV65.idr.RPKM.gff age=E14; bioRep=26A,26B; cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47144,LID47145; labProtocolId=26A,26B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=TranscriptEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/LID47146-LID47147_ExonsEnsV65.idr.RPKM.gff age=E14.5; bioRep=28A,28B; cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; labProtocolId=28A,28B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=ExonsEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/LID47146-LID47147_GeneEnsV65.idr.RPKM.gff age=E14.5; bioRep=28A,28B; cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; labProtocolId=28A,28B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=GeneEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/LID47146-LID47147_TranscriptEnsV65.idr.RPKM.gff age=E14.5; bioRep=28A,28B; cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; labProtocolId=28A,28B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=TranscriptEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/LID47148-LID47149_ExonsEnsV65.idr.RPKM.gff age=E18; bioRep=27A,27B; cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47148,LID47149; labProtocolId=27A,27B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=ExonsEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/LID47148-LID47149_GeneEnsV65.idr.RPKM.gff age=E18; bioRep=27A,27B; cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47148,LID47149; labProtocolId=27A,27B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=GeneEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/LID47148-LID47149_TranscriptEnsV65.idr.RPKM.gff age=E18; bioRep=27A,27B; cell=Liver; dataType=RnaSeq; dateProcessed=20130426; grant=Gingeras; lab=CSHL; labExpId=LID47148,LID47149; labProtocolId=27A,27B; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; spikeInPool=Nist14; strain=C57BL/6J; type=gff; view=TranscriptEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeCshlMouseLongRnaSeq/idrOutNew1366969392787402696/SID38132-SID38133_ExonsEnsV65.idr.RPKM.gff age=adult-8wks; bioRep=32A,32B; cell=CH12; dataType=RnaSeq; 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sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep1-wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=adult-24wks; bioRep=.; cell=BAT; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep1,wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=BoneMarrow; composite=wgEncodeLicrRnaSeq; 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sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6Rep1-wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6Rep2_ExonEnsV65IAcuff.gff age=E14.5; bioRep=.; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; 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sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=MEF; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=MEF; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; 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sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=OlfactBulb; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=OlfactBulb; composite=wgEncodeLicrRnaSeq; 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sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=Placenta; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=F; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=Placenta; composite=wgEncodeLicrRnaSeq; 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treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=SmIntestine; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=SmIntestine; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=SmIntestine; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=Spleen; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=Spleen; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeLicrMouseRnaSeq/licr/wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep1-wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=Spleen; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Ren; lab=LICR; labExpId=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep1,wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2; labProtocolId=WC+; localization=cell; organism=mouse; readType=1x36; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; 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type=gtf; view=TranscriptEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeSydhRnaSeq/20121029_Sydh_mouse_RnaSeq_Ens65_quantifications/wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep1-wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep2_ExonEnsV65.gff age=immortalized; cell=CH12; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; grant=Snyder; lab=Stanford; labExpId=wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep1,wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep2; localization=cell; organism=mouse; readType=2x101D; replicate=1,2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=F; strain=B10.H-2aH-4bp/Wts; treatment=None; type=gff; view=ExonsEnsV65; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeSydhRnaSeq/20121029_Sydh_mouse_RnaSeq_Ens65_quantifications/wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep1-wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep2_GeneEnsV65.gff age=immortalized; cell=CH12; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; grant=Snyder; lab=Stanford; labExpId=wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep1,wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep2; 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treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep1-wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep2_TranscriptEnsV65IAcuff.gtf age=immortalized; bioRep=.; cell=416B; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep1,wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=B6D2F1/J; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep1-wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep2_ExonEnsV65IAcuff.gff age=immortalized; bioRep=.; cell=A20; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; 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bioRep=.; cell=A20; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep1,wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=BALB/cAnN; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=B-cell_(CD19+); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=B-cell_(CD19+); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=B-cell_(CD19+); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep1-wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; 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seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep1-wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=B-cell_(CD43-); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep1,wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6Rep1-wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=Cerebellum; composite=wgEncodeUwRnaSeq; 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labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep1-wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=Cerebrum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep1,wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep1-wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=Cerebrum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep1,wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=FatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=FatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=FatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep1-wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=GenitalFatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep1,wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep1-wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=GenitalFatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep1,wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; 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view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6Rep1-wgEncodeUwRnaSeqLiverCellPolyaME14halfS129Rep1_TranscriptEnsV65IAcuff.gtf age=E14.5; bioRep=.; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6Rep1,wgEncodeUwRnaSeqLiverCellPolyaME14halfS129Rep1; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6,129; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6Rep1_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=Lung; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6Rep1; labProtocolId=WC; 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labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1-wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2_ExonEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=MEL; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1,wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1-wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2_GeneEnsV65IAcuff.gff age=adult-8wks; bioRep=.; cell=MEL; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1,wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1-wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2_TranscriptEnsV65IAcuff.gtf age=adult-8wks; bioRep=.; cell=MEL; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1,wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; 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treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1-wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2_ExonEnsV65IAcuff.gff age=E18.5; bioRep=.; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1,wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=ExonsEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1-wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2_GeneEnsV65IAcuff.gff age=E18.5; bioRep=.; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1,wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gff; view=GeneEnsV65IAcuff; http://genome.crg.es/~jlagarde/encode/pre-DCC/wgEncodeUwMouseRnaSeq/uw/wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1-wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2_TranscriptEnsV65IAcuff.gtf age=E18.5; bioRep=.; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE_Mar_2012_Freeze; grant=Stam; lab=UW; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1,wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2; labProtocolId=WC; localization=cell; organism=mouse; readType=1x50; replicate=1,2; rnaExtract=polyA; seqPlatform=.; sex=M; strain=C57BL/6; treatment=.; type=gtf; view=TranscriptEnsV65IAcuff; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeq10t12C3hFR2x75Th131Il200AlnRep1.bam age=immortalized; cell=10T1/2; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; dccAccession=wgEncodeEM002735; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=11154; mapAlgorithm=TH131; md5sum=8323ccba1b81240540517a9387bb57a4; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=21G; strain=C3H; subId=6082; tableName=wgEncodeCaltechRnaSeq10t12C3hFR2x75Th131Il200AlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeq10t12C3hFR2x75Th131Il200AlnRep1.bam.bai age=immortalized; cell=10T1/2; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; dccAccession=wgEncodeEM002735; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=11154; 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type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeq10t12C3hFR2x75Th131Il200E2p60hAlnRep1.bam.bai age=immortalized; cell=10T1/2; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-03-19; dateUnrestricted=2012-12-19; dccAccession=wgEncodeEM002734; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=11155; mapAlgorithm=TH131; md5sum=4df4596aa4decb7aa3bc14ac96ff1edc; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=4.6M; strain=C3H; subId=6081; tableName=wgEncodeCaltechRnaSeq10t12C3hFR2x75Th131Il200E2p60hAlnRep1; treatment=EqS_2.0pct_60hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeq10t12C3hFR2x75Th131Il200E2p60hFastqRd1Rep1.fastq.gz age=immortalized; cell=10T1/2; composite=wgEncodeCaltechRnaSeq; 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dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; dccAccession=wgEncodeEM002735; geoSampleAccession=GSM929773; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=11154; mapAlgorithm=TH131; md5sum=9a2fb7568049535186e918f3952a4f7e; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=13G; strain=C3H; subId=6082; treatment=None; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeq10t12C3hFR2x75Th131Il200FastqRd2Rep1.fastq.gz age=immortalized; cell=10T1/2; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-03-20; dateUnrestricted=2012-12-20; dccAccession=wgEncodeEM002735; geoSampleAccession=GSM929773; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=11154; mapAlgorithm=TH131; md5sum=4e24f9b9391cf7b741ce74baed38a1ef; 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cell=C2C12; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-04-16; dateUnrestricted=2013-01-16; dccAccession=wgEncodeEM002733; geoSampleAccession=GSM929775; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=10986; mapAlgorithm=TH131; md5sum=7e27b5248e448491538355a6fbc8ff26; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=215M; strain=C3H; subId=4936; tableName=wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200E2p60hRawRep1; treatment=EqS_2.0pct_60hr; type=bigWig; view=RawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200E2p60hSigRep1.bigWig age=immortalized; cell=C2C12; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002733; geoSampleAccession=GSM929775; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=10986; mapAlgorithm=TH131; md5sum=3bb0070418d4520398fee5113d4b4b20; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=203M; strain=C3H; subId=4936; tableName=wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200E2p60hSigRep1; treatment=EqS_2.0pct_60hr; type=bigWig; view=Signal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200FastqRd1Rep1.fastq.gz age=immortalized; cell=C2C12; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-01-31; dateUnrestricted=2012-10-31; dccAccession=wgEncodeEM002732; geoSampleAccession=GSM929774; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=10985; mapAlgorithm=TH131; md5sum=d35aaa9b2b504a0f0144cfbdeb1d2e1f; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=16G; strain=C3H; subId=4910; treatment=None; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200FastqRd2Rep1.fastq.gz age=immortalized; cell=C2C12; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-01-31; dateUnrestricted=2012-10-31; dccAccession=wgEncodeEM002732; geoSampleAccession=GSM929774; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=10985; mapAlgorithm=TH131; md5sum=e6987968c2c4c0a90d44fa8a63ae86e6; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=17G; strain=C3H; subId=4910; treatment=None; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200RawRep1.bigWig age=immortalized; cell=C2C12; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-18; dateSubmitted=2012-04-16; dateUnrestricted=2013-01-16; dccAccession=wgEncodeEM002732; geoSampleAccession=GSM929774; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=10985; mapAlgorithm=TH131; md5sum=9429e5327e11b814f451cb2772354520; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=216M; strain=C3H; subId=4910; tableName=wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200RawRep1; treatment=None; type=bigWig; view=RawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCaltechRnaSeq/wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200SigRep1.bigWig age=immortalized; cell=C2C12; composite=wgEncodeCaltechRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateResubmitted=2012-04-17; dateSubmitted=2012-01-31; dateUnrestricted=2012-11-31; dccAccession=wgEncodeEM002732; geoSampleAccession=GSM929774; grant=Hardison; insertLength=200; lab=Caltech-m; labExpId=10985; mapAlgorithm=TH131; md5sum=3d9eaf139f68b043ba0a65aeed18553d; organism=mouse; project=wgEncode; readType=2x75; replicate=1; rnaExtract=longPolyA; sex=F; size=205M; strain=C3H; subId=4910; tableName=wgEncodeCaltechRnaSeqC2c12C3hFR2x75Th131Il200SigRep1; treatment=None; type=bigWig; view=Signal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=1AWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002520; grant=Gingeras; lab=CSHL; labExpId=LID20728; localization=cell; md5sum=71e18d8da2b164f0cb71123b3161508a; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=7769; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=1AWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002520; grant=Gingeras; lab=CSHL; labExpId=LID20728; localization=cell; md5sum=aca31b16cd476655e91f6c034d970c69; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7769; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002520; grant=Gingeras; lab=CSHL; labExpId=LID20729; localization=cell; md5sum=98b5e08df0ea73fd07244c764d8159ff; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=7762; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002520; grant=Gingeras; lab=CSHL; labExpId=LID20729; localization=cell; md5sum=20ade5d22552cf0108de72cb83d7e631; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7762; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=1AWC,1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728,LID20729; localization=cell; md5sum=2ac3c88ca0352bab0b285b49655a643a; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=5583; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=1AWC,1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728,LID20729; labVersion=iIDR; localization=cell; md5sum=3bd540ef60b9b2bb13b8b0daef51c802; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7091; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=1AWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728; localization=cell; md5sum=de6c526f76a63ee81cea4a049749a061; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=5493; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20729; localization=cell; md5sum=074f8e782cb3bb73e085cc50e1546209; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.7G; spikeInPool=Nist14; strain=C57BL/6J; subId=5485; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=1AWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728; localization=cell; md5sum=ac24a9dc9a416f2ddc701132761534ed; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.6G; spikeInPool=Nist14; strain=C57BL/6J; subId=5493; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20729; localization=cell; md5sum=6e9864d8c304153c2e0ca75811c9434d; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=5485; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=1AWC,1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728,LID20729; labVersion=iIDR; localization=cell; md5sum=7f450ab4538aa6aaf25f5b151ecb1098; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7091; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=1AWC,1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728,LID20729; labVersion=iIDR; localization=cell; md5sum=72565c566abec8a00085304eae5853e5; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=6229; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=1AWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728; localization=cell; md5sum=2e6d0b0d91abc884e7ec9f9b481b4eda; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=68M; spikeInPool=Nist14; strain=C57BL/6J; subId=5493; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20729; localization=cell; md5sum=ad94ee360d2cb11a4da4362b486fa74a; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=69M; spikeInPool=Nist14; strain=C57BL/6J; subId=5485; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=1AWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728; localization=cell; md5sum=b55ceb89b9161129ed59cdeffa28a221; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=69M; spikeInPool=Nist14; strain=C57BL/6J; subId=5493; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20729; localization=cell; md5sum=98fa11287628128bbe42292eea6a6681; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=70M; spikeInPool=Nist14; strain=C57BL/6J; subId=5485; tableName=wgEncodeCshlLongRnaSeqAdrenalAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=1AWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728; localization=cell; md5sum=1b21f970cb14900cd8b2b670fe9197e0; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=48M; spikeInPool=Nist14; strain=C57BL/6J; subId=7769; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20729; localization=cell; md5sum=698258611989dc1ae12e5785660c1ecf; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=46M; spikeInPool=Nist14; strain=C57BL/6J; subId=7762; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqAdrenalAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=1AWC,1BWC; cell=Adrenal; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002520; geoSampleAccession=GSM900188; grant=Gingeras; lab=CSHL; labExpId=LID20728,LID20729; localization=cell; md5sum=8344d850cdfa6b76fa407f4d352f4b9f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=5583; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep1.bam age=adult-8wks; bioRep=30AWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003062; grant=Gingeras; lab=CSHL; labExpId=LID47030; localization=cell; md5sum=1e56577882c46a2a88fc2636a12ca288; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=23G; spikeInPool=Nist14; strain=C57BL/6J; subId=7381; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep1.bam.bai age=adult-8wks; bioRep=30AWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003062; grant=Gingeras; lab=CSHL; labExpId=LID47030; localization=cell; md5sum=2d398925ad7cfa3073615a0dbd637ce2; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7381; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep2.bam age=adult-8wks; bioRep=30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003062; grant=Gingeras; lab=CSHL; labExpId=LID47031; localization=cell; md5sum=c82de56373defda5f1ac12cb0a1a7c75; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=22G; spikeInPool=Nist14; strain=C57BL/6J; subId=7380; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep2.bam.bai age=adult-8wks; bioRep=30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003062; grant=Gingeras; lab=CSHL; labExpId=LID47031; localization=cell; md5sum=7e90e970c291668b83cd72eff45f7aba; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7380; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=30AWC,30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47030,LID47031; localization=cell; md5sum=84f72dcd1a3a61a39c66df1285bff466; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12M; spikeInPool=Nist14; strain=C57BL/6J; subId=7378; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=30AWC,30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47030,LID47031; localization=cell; md5sum=6a46cd18b5c98a7211ecb6cfca97f1dd; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=23M; spikeInPool=Nist14; strain=C57BL/6J; subId=7792; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksFastqRd1Rep1.fastq.gz age=adult-8wks; bioRep=30AWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47030; localization=cell; md5sum=3acaa1bf4440adf3a7289815363ea39e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7381; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksFastqRd1Rep2.fastq.gz age=adult-8wks; bioRep=30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47031; localization=cell; md5sum=86470d676073ec5a9f83b428f9271562; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7380; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksFastqRd2Rep1.fastq.gz age=adult-8wks; bioRep=30AWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47030; localization=cell; md5sum=3c88deabd6306be1be02bcdd13eea3db; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7381; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksFastqRd2Rep2.fastq.gz age=adult-8wks; bioRep=30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47031; localization=cell; 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bioRep=30AWC,30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47030,LID47031; localization=cell; md5sum=821ed5573e688ff8dd89f2ac0962910c; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7378; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=30AWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; 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sex=U; size=219M; spikeInPool=Nist14; strain=C57BL/6J; subId=7380; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=30AWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47030; localization=cell; md5sum=680b33c3c092c37fea2b731dc2466e1b; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=247M; spikeInPool=Nist14; strain=C57BL/6J; subId=7381; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47031; localization=cell; md5sum=a9b70a01af4f1ed323dbb42ba153be72; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=223M; spikeInPool=Nist14; strain=C57BL/6J; subId=7380; tableName=wgEncodeCshlLongRnaSeqBladderAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksSpikeinsRep1.spikeins age=adult-8wks; bioRep=30AWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; 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type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqBladderAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=30AWC,30BWC; cell=Bladder; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003062; geoSampleAccession=GSM1000564; grant=Gingeras; lab=CSHL; labExpId=LID47030,LID47031; localization=cell; md5sum=b45bde38e95ade07971d34cf20968b28; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=3.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7792; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep1.bam age=adult-8wks; bioRep=20AWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; grant=Gingeras; lab=CSHL; labExpId=LID47036; localization=cell; md5sum=5c76aa2f519a1ee38b23f8fb35c20e15; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7382; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep1.bam.bai age=adult-8wks; bioRep=20AWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; grant=Gingeras; lab=CSHL; labExpId=LID47036; localization=cell; md5sum=ab0523339e46bb4a28c0fe5f17487c86; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7382; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep2.bam age=adult-8wks; bioRep=20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003058; grant=Gingeras; lab=CSHL; labExpId=LID47037; localization=cell; md5sum=17096dccb2bab597886b366b12ff62e9; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7367; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep2.bam.bai age=adult-8wks; bioRep=20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003058; grant=Gingeras; lab=CSHL; labExpId=LID47037; localization=cell; md5sum=124fdcabd08ab1c702a18261a68b572a; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7367; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=20AWC,20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036,LID47037; localization=cell; md5sum=5a991b1487a5f3b7af587c0019f6e45a; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7394; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=20AWC,20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036,LID47037; localization=cell; md5sum=242618af44af7e5c5bbff028b1bdcf4d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=26M; spikeInPool=Nist14; strain=C57BL/6J; subId=7790; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksFastqRd1Rep1.fastq.gz age=adult-8wks; bioRep=20AWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036; localization=cell; md5sum=1914be2648b13bb95232eb88e1e2c943; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7382; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksFastqRd1Rep2.fastq.gz age=adult-8wks; bioRep=20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47037; localization=cell; md5sum=54cf5077cb0c14e3f042c7929cb6091b; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7367; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksFastqRd2Rep1.fastq.gz age=adult-8wks; bioRep=20AWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036; localization=cell; md5sum=a27041e20c8d1715edcf1cbb3871babf; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7382; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksFastqRd2Rep2.fastq.gz age=adult-8wks; bioRep=20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47037; localization=cell; md5sum=02b47fcc3d242a19ce9b9361d939c6a1; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12G; spikeInPool=Nist14; strain=C57BL/6J; subId=7367; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=20AWC,20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036,LID47037; localization=cell; md5sum=92bc4a7740ab461cb2fc1ce9ff83f059; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7790; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=20AWC,20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036,LID47037; localization=cell; md5sum=867927ef9581119b03842be40a4e62a7; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=15M; spikeInPool=Nist14; strain=C57BL/6J; subId=7394; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=20AWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036; localization=cell; md5sum=3d5bef5231d2d52c89bbae40736d56e2; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=311M; spikeInPool=Nist14; strain=C57BL/6J; subId=7382; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47037; localization=cell; md5sum=8378f7571691ba1b61633d2006e1c615; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=297M; spikeInPool=Nist14; strain=C57BL/6J; subId=7367; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=20AWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036; localization=cell; md5sum=6bbd84ed0668ef40690938f9b8825de0; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=321M; spikeInPool=Nist14; strain=C57BL/6J; subId=7382; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47037; localization=cell; md5sum=d114a810a72bf1260ea8fe5cf511561a; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=306M; spikeInPool=Nist14; strain=C57BL/6J; subId=7367; tableName=wgEncodeCshlLongRnaSeqCbellumAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksSpikeinsRep1.spikeins age=adult-8wks; bioRep=20AWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036; localization=cell; md5sum=902e3a212b527c89c056610162c60cce; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=652M; spikeInPool=Nist14; strain=C57BL/6J; subId=7820; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksSpikeinsRep2.spikeins age=adult-8wks; bioRep=20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47037; localization=cell; md5sum=00471539ce43169fb7fec701efc4b75d; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=823M; spikeInPool=Nist14; strain=C57BL/6J; subId=7828; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCbellumAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=20AWC,20BWC; cell=Cerebellum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003058; geoSampleAccession=GSM1000567; grant=Gingeras; lab=CSHL; labExpId=LID47036,LID47037; localization=cell; md5sum=a6cf1721b48f6fbe201bb20e03ead65d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7790; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfAlnRep1.bam age=E11.5; bioRep=21AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003052; grant=Gingeras; lab=CSHL; labExpId=LID46946; localization=cell; md5sum=ec10815def5836c380635a5443dc5d4e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=23G; spikeInPool=Nist14; strain=C57BL/6J; subId=7388; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfAlnRep1.bam.bai age=E11.5; bioRep=21AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003052; grant=Gingeras; lab=CSHL; labExpId=LID46946; localization=cell; md5sum=800a7b4012a99a9d5188692afca5929e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7388; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfAlnRep2.bam age=E11.5; bioRep=21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003052; grant=Gingeras; lab=CSHL; labExpId=LID46947; localization=cell; md5sum=10c9cc1bc92820852a653da98038c9fa; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7345; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfAlnRep2.bam.bai age=E11.5; bioRep=21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003052; grant=Gingeras; lab=CSHL; labExpId=LID46947; localization=cell; md5sum=90af0abc18f453db27218a7475747ba1; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7345; tableName=wgEncodeCshlLongRnaSeqCnsE11halfAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfContigs.bedRnaElements.gz age=E11.5; bioRep=21AWC,21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946,LID46947; localization=cell; md5sum=0f4cc0aaebb54c372d4d12e1c7fb6a8f; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7369; tableName=wgEncodeCshlLongRnaSeqCnsE11halfContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfExonsDeNovo.gtf.gz age=E11.5; bioRep=21AWC,21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946,LID46947; localization=cell; md5sum=b3fa49ff82ccdfe3a2fda5af1819a92f; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=27M; spikeInPool=Nist14; strain=C57BL/6J; subId=7787; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfFastqRd1Rep1.fastq.gz age=E11.5; bioRep=21AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946; localization=cell; md5sum=726a712228b59952670821b3f11520f8; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=16G; spikeInPool=Nist14; strain=C57BL/6J; subId=7388; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfFastqRd1Rep2.fastq.gz age=E11.5; bioRep=21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46947; localization=cell; md5sum=64a6e108ac892f579d22fde3cea23472; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7345; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfFastqRd2Rep1.fastq.gz age=E11.5; bioRep=21AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946; localization=cell; md5sum=a1b132f97d3f5e239193c89bebd5b665; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=16G; spikeInPool=Nist14; strain=C57BL/6J; subId=7388; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfFastqRd2Rep2.fastq.gz age=E11.5; bioRep=21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46947; localization=cell; md5sum=1650cd9ace630eec3566faee7470d462; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7345; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfGeneDeNovo.gtf.gz age=E11.5; bioRep=21AWC,21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946,LID46947; localization=cell; md5sum=513ec89f2e612c2fbbd027b17d6e6cb7; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7787; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfJunctions.bedRnaElements.gz age=E11.5; bioRep=21AWC,21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946,LID46947; localization=cell; md5sum=913b24d24458131cbdfc99144adcda7d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=17M; spikeInPool=Nist14; strain=C57BL/6J; subId=7369; tableName=wgEncodeCshlLongRnaSeqCnsE11halfJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfMinusRawRep1.bigWig age=E11.5; bioRep=21AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946; localization=cell; md5sum=dee1c848169fc0fd7921b94cab056630; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=248M; spikeInPool=Nist14; strain=C57BL/6J; subId=7388; tableName=wgEncodeCshlLongRnaSeqCnsE11halfMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfMinusRawRep2.bigWig age=E11.5; bioRep=21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46947; localization=cell; md5sum=7e66cef818c38ab9204c627973445e5a; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=343M; spikeInPool=Nist14; strain=C57BL/6J; subId=7345; tableName=wgEncodeCshlLongRnaSeqCnsE11halfMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfPlusRawRep1.bigWig age=E11.5; bioRep=21AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946; localization=cell; md5sum=240998a1768a7ccd40aa7355612fc9f3; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=249M; spikeInPool=Nist14; strain=C57BL/6J; subId=7388; tableName=wgEncodeCshlLongRnaSeqCnsE11halfPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfPlusRawRep2.bigWig age=E11.5; bioRep=21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46947; localization=cell; md5sum=7f74425c13b039b868020ec4436e3ebd; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=346M; spikeInPool=Nist14; strain=C57BL/6J; subId=7345; tableName=wgEncodeCshlLongRnaSeqCnsE11halfPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfSpikeinsRep1.spikeins age=E11.5; bioRep=21AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946; localization=cell; md5sum=881674e77de4eb104f1d907999b752ef; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=857M; spikeInPool=Nist14; strain=C57BL/6J; subId=7827; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfSpikeinsRep2.spikeins age=E11.5; bioRep=21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46947; localization=cell; md5sum=18835457419fb37bb80072007d57bf04; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=551M; spikeInPool=Nist14; strain=C57BL/6J; subId=7814; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE11halfTranscriptDeNovo.gtf.gz age=E11.5; bioRep=21AWC,21BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003052; geoSampleAccession=GSM1000573; grant=Gingeras; lab=CSHL; labExpId=LID46946,LID46947; localization=cell; md5sum=be536e0534ab15f65a2bd961933be955; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=7787; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14AlnRep1.bam age=E14; bioRep=23AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; grant=Gingeras; lab=CSHL; labExpId=LID46948; localization=cell; md5sum=0bed0472f8f1ae17bf43b5ce67d4b56b; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=18G; spikeInPool=Nist14; strain=C57BL/6J; subId=7379; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14AlnRep1.bam.bai age=E14; bioRep=23AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; grant=Gingeras; lab=CSHL; labExpId=LID46948; localization=cell; md5sum=f53d0cbb25ff198148727aeac4aa7989; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7379; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14AlnRep2.bam age=E14; bioRep=23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; grant=Gingeras; lab=CSHL; labExpId=LID46949; localization=cell; md5sum=e992f573bc1a692f81a6689759f5c62c; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=27G; spikeInPool=Nist14; strain=C57BL/6J; subId=7375; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14AlnRep2.bam.bai age=E14; bioRep=23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; grant=Gingeras; lab=CSHL; labExpId=LID46949; localization=cell; md5sum=3a0c489daca0e3284e9357fac6bef2cc; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7375; tableName=wgEncodeCshlLongRnaSeqCnsE14AlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14Contigs.bedRnaElements.gz age=E14; bioRep=23AWC,23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948,LID46949; localization=cell; md5sum=369351fbffcc5c89ab8d6c51d74e0409; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=15M; spikeInPool=Nist14; strain=C57BL/6J; subId=7361; tableName=wgEncodeCshlLongRnaSeqCnsE14Contigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14ExonsDeNovo.gtf.gz age=E14; bioRep=23AWC,23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948,LID46949; localization=cell; md5sum=08bec91272fa438090687cbe543f44e5; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=31M; spikeInPool=Nist14; strain=C57BL/6J; subId=7788; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14FastqRd1Rep1.fastq.gz age=E14; bioRep=23AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948; localization=cell; md5sum=28120752c72a6d08b63cdf2ffab3735f; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12G; spikeInPool=Nist14; strain=C57BL/6J; subId=7379; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14FastqRd1Rep2.fastq.gz age=E14; bioRep=23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46949; localization=cell; md5sum=4ac636a59203827e6a419e52f87508c5; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=17G; spikeInPool=Nist14; strain=C57BL/6J; subId=7375; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14FastqRd2Rep1.fastq.gz age=E14; bioRep=23AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948; localization=cell; md5sum=d35c242352261daaff2a075ebc7eb198; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12G; spikeInPool=Nist14; strain=C57BL/6J; subId=7379; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14FastqRd2Rep2.fastq.gz age=E14; bioRep=23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46949; localization=cell; md5sum=563065b7f5c54c806e276d115dea435e; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=17G; spikeInPool=Nist14; strain=C57BL/6J; subId=7375; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14GeneDeNovo.gtf.gz age=E14; bioRep=23AWC,23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948,LID46949; localization=cell; md5sum=44568be9b25a79328a29e2c66bf6b440; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=4.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7788; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14Junctions.bedRnaElements.gz age=E14; bioRep=23AWC,23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948,LID46949; localization=cell; md5sum=1dbe3f4b672c7db1cd556f0ad20669a7; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=17M; spikeInPool=Nist14; strain=C57BL/6J; subId=7361; tableName=wgEncodeCshlLongRnaSeqCnsE14Junctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14MinusRawRep1.bigWig age=E14; bioRep=23AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948; localization=cell; md5sum=26d2a12f610ba9654798534703abfc78; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=317M; spikeInPool=Nist14; strain=C57BL/6J; subId=7379; tableName=wgEncodeCshlLongRnaSeqCnsE14MinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14MinusRawRep2.bigWig age=E14; bioRep=23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46949; localization=cell; md5sum=4134d210f2c2bf14f110dfb78023107b; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=366M; spikeInPool=Nist14; strain=C57BL/6J; subId=7375; tableName=wgEncodeCshlLongRnaSeqCnsE14MinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14PlusRawRep1.bigWig age=E14; bioRep=23AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948; localization=cell; md5sum=5fab715309d46b27ce82dc07e3159c97; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=319M; spikeInPool=Nist14; strain=C57BL/6J; subId=7379; tableName=wgEncodeCshlLongRnaSeqCnsE14PlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14PlusRawRep2.bigWig age=E14; bioRep=23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46949; localization=cell; md5sum=3c3f67ea98ee90c7afc2c275a7313306; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=367M; spikeInPool=Nist14; strain=C57BL/6J; subId=7375; tableName=wgEncodeCshlLongRnaSeqCnsE14PlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14SpikeinsRep1.spikeins age=E14; bioRep=23AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948; localization=cell; md5sum=24adfc0330c9829f653c4283b6a62b29; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=463M; spikeInPool=Nist14; strain=C57BL/6J; subId=7839; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14SpikeinsRep2.spikeins age=E14; bioRep=23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46949; localization=cell; md5sum=6c9301fe40f6bf7a5c852f59d751a1b8; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=550M; spikeInPool=Nist14; strain=C57BL/6J; subId=7838; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE14TranscriptDeNovo.gtf.gz age=E14; bioRep=23AWC,23BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003056; geoSampleAccession=GSM1000569; grant=Gingeras; lab=CSHL; labExpId=LID46948,LID46949; localization=cell; md5sum=9bb26facdddb66d054041a171142e74c; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7788; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18AlnRep1.bam age=E18; bioRep=24AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003057; grant=Gingeras; lab=CSHL; labExpId=LID46950; localization=cell; md5sum=9aa4c97affc681fd59ad984aea8f024e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=17G; spikeInPool=Nist14; strain=C57BL/6J; subId=7376; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18AlnRep1.bam.bai age=E18; bioRep=24AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003057; grant=Gingeras; lab=CSHL; labExpId=LID46950; localization=cell; md5sum=d4142934932e8ff5323cf1da3d44cf84; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7376; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18AlnRep2.bam age=E18; bioRep=24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003057; grant=Gingeras; lab=CSHL; labExpId=LID46951; localization=cell; md5sum=0b45719c0e7e854f79cc7e4f082d5643; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=30G; spikeInPool=Nist14; strain=C57BL/6J; subId=7391; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18AlnRep2.bam.bai age=E18; bioRep=24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003057; grant=Gingeras; lab=CSHL; labExpId=LID46951; localization=cell; md5sum=eb1cee6622d5587650dcf5e4bcf76f1d; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7391; tableName=wgEncodeCshlLongRnaSeqCnsE18AlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18Contigs.bedRnaElements.gz age=E18; bioRep=24AWC,24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950,LID46951; localization=cell; md5sum=b1cc90c4be86208b7f1fc91e9c723bbe; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7364; tableName=wgEncodeCshlLongRnaSeqCnsE18Contigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18ExonsDeNovo.gtf.gz age=E18; bioRep=24AWC,24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; 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http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18FastqRd1Rep2.fastq.gz age=E18; bioRep=24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46951; localization=cell; md5sum=bff06141e372023d986f9f8619a6de3c; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=19G; spikeInPool=Nist14; strain=C57BL/6J; subId=7391; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18FastqRd2Rep1.fastq.gz age=E18; bioRep=24AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950; localization=cell; md5sum=22fb050745749be3940c84359c2d9576; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=11G; spikeInPool=Nist14; strain=C57BL/6J; subId=7376; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18FastqRd2Rep2.fastq.gz age=E18; bioRep=24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46951; localization=cell; md5sum=3ffa71817b338baaf18afcf273d39b4d; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=19G; spikeInPool=Nist14; strain=C57BL/6J; subId=7391; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18GeneDeNovo.gtf.gz age=E18; bioRep=24AWC,24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950,LID46951; localization=cell; md5sum=5224e72647e31d99904eec9d88f4ba27; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=4.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7789; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18Junctions.bedRnaElements.gz age=E18; bioRep=24AWC,24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950,LID46951; localization=cell; md5sum=12e46a338d9af310aa204868e7f174b6; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=16M; spikeInPool=Nist14; strain=C57BL/6J; subId=7364; tableName=wgEncodeCshlLongRnaSeqCnsE18Junctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18MinusRawRep1.bigWig age=E18; bioRep=24AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950; localization=cell; md5sum=00a2b28637d4f9ee702b25c5f7345375; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=307M; spikeInPool=Nist14; strain=C57BL/6J; subId=7376; tableName=wgEncodeCshlLongRnaSeqCnsE18MinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18MinusRawRep2.bigWig age=E18; bioRep=24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46951; localization=cell; md5sum=b331e178cc64348e81d3d09e88e4bf95; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=369M; spikeInPool=Nist14; strain=C57BL/6J; subId=7391; tableName=wgEncodeCshlLongRnaSeqCnsE18MinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18PlusRawRep1.bigWig age=E18; bioRep=24AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950; localization=cell; md5sum=697b39af04afc5d99f79f807a317c6fc; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=308M; spikeInPool=Nist14; strain=C57BL/6J; subId=7376; tableName=wgEncodeCshlLongRnaSeqCnsE18PlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18PlusRawRep2.bigWig age=E18; bioRep=24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46951; localization=cell; md5sum=94da2b1f3ad0c6356d2841e8c9a2b10e; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=370M; spikeInPool=Nist14; strain=C57BL/6J; subId=7391; tableName=wgEncodeCshlLongRnaSeqCnsE18PlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18SpikeinsRep1.spikeins age=E18; bioRep=24AWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950; localization=cell; md5sum=e80744544fd5e230e089939705923089; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=500M; spikeInPool=Nist14; strain=C57BL/6J; subId=7837; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18SpikeinsRep2.spikeins age=E18; bioRep=24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46951; localization=cell; md5sum=30b22a3bbbdd276f1290456513f902aa; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=923M; spikeInPool=Nist14; strain=C57BL/6J; subId=7831; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCnsE18TranscriptDeNovo.gtf.gz age=E18; bioRep=24AWC,24BWC; cell=CNS; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003057; geoSampleAccession=GSM1000570; grant=Gingeras; lab=CSHL; labExpId=LID46950,LID46951; localization=cell; md5sum=bfedef0c3d21e4a4fbecb5fbe4bf2e85; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=4.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7789; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=14AWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002512; grant=Gingeras; lab=CSHL; labExpId=LID21040; localization=cell; md5sum=ac6d22eac0e317b75ed62d967553c621; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=7764; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=14AWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002512; grant=Gingeras; lab=CSHL; labExpId=LID21040; localization=cell; md5sum=c52f09e98a97b964e7db0cc32cbf61dd; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7764; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002512; grant=Gingeras; lab=CSHL; labExpId=LID21041; localization=cell; md5sum=2a309ed7a8dbeedf10a82894d58657ee; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=7752; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002512; grant=Gingeras; lab=CSHL; labExpId=LID21041; localization=cell; md5sum=0d7b0d44db0ba3a5c952664484b014d7; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7752; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=14AWC,14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-08; dateUnrestricted=2012-11-08; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040,LID21041; localization=cell; md5sum=20342a4b88687d3c7fdb8fc66512e1d3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; 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organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=5431; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=14AWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040; localization=cell; md5sum=70367941a5109afb4f22a71844a18917; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=5435; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21041; localization=cell; md5sum=65840ffefb63de108f08d99a4ba14393; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5431; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=14AWC,14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040,LID21041; labVersion=iIDR; localization=cell; md5sum=9d2699b736cd43c18c62aeab190b8a93; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7077; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=14AWC,14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040,LID21041; labVersion=iIDR; localization=cell; md5sum=3cc6c11a1b5805ac9391bcc80cd38e19; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=6215; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=14AWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040; localization=cell; md5sum=7bc848d177cff8835329996ff81705d3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=85M; spikeInPool=Nist14; strain=C57BL/6J; subId=5435; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21041; localization=cell; md5sum=70a6c5c65bc38783d5f9687571f681a4; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=93M; spikeInPool=Nist14; strain=C57BL/6J; subId=5431; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=14AWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040; localization=cell; md5sum=4e806f89f5d87f7a05d2a4a04877e2f7; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=86M; spikeInPool=Nist14; strain=C57BL/6J; subId=5435; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21041; localization=cell; md5sum=37644ed671ae2954eae640349ffd7377; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=94M; spikeInPool=Nist14; strain=C57BL/6J; subId=5431; tableName=wgEncodeCshlLongRnaSeqColonAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=14AWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040; localization=cell; md5sum=9bdc5dffb6ccd8d704b6db165810c654; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=41M; spikeInPool=Nist14; strain=C57BL/6J; subId=7764; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21041; localization=cell; md5sum=67b76eab201f95ba89de6a1abed19a98; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=46M; spikeInPool=Nist14; strain=C57BL/6J; subId=7752; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqColonAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=14AWC,14BWC; cell=Colon; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-08; dateUnrestricted=2012-11-08; dccAccession=wgEncodeEM002512; geoSampleAccession=GSM900198; grant=Gingeras; lab=CSHL; labExpId=LID21040,LID21041; localization=cell; md5sum=3d0e1696fae631bf4f873f93c678ae8d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=5566; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep1.bam age=adult-8wks; bioRep=6AWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; grant=Gingeras; lab=CSHL; labExpId=LID47032; localization=cell; md5sum=b922885e05cbc12dc2435a2622949b52; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=22G; spikeInPool=Nist14; strain=C57BL/6J; subId=7373; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep1.bam.bai age=adult-8wks; bioRep=6AWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; grant=Gingeras; lab=CSHL; labExpId=LID47032; localization=cell; md5sum=647fe56dd18769b6880b398b686d619b; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7373; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep2.bam age=adult-8wks; bioRep=6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003063; grant=Gingeras; lab=CSHL; labExpId=LID47033; localization=cell; md5sum=352998d9040e64fcf3a533cdebe672d1; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=24G; spikeInPool=Nist14; strain=C57BL/6J; subId=7395; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep2.bam.bai age=adult-8wks; bioRep=6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003063; grant=Gingeras; lab=CSHL; labExpId=LID47033; localization=cell; md5sum=21d255d14337d1e70e990b1ba3a51f89; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7395; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=6AWC,6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032,LID47033; localization=cell; md5sum=97dcae6b1b5d833ee72c58bcf6e16b31; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7377; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=6AWC,6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032,LID47033; localization=cell; md5sum=2695c3ca839eba286ca3fe84ba37e7cd; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=24M; spikeInPool=Nist14; strain=C57BL/6J; subId=7793; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksFastqRd1Rep1.fastq.gz age=adult-8wks; bioRep=6AWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032; localization=cell; md5sum=46f690cd605fea08ec6430ab0221155c; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7373; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksFastqRd1Rep2.fastq.gz age=adult-8wks; bioRep=6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47033; localization=cell; md5sum=aae511a97e3cb028525c1d1977f7fac6; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=15G; spikeInPool=Nist14; strain=C57BL/6J; subId=7395; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksFastqRd2Rep1.fastq.gz age=adult-8wks; bioRep=6AWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032; localization=cell; md5sum=c42a2012b27f11309c3409b96e10d129; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7373; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksFastqRd2Rep2.fastq.gz age=adult-8wks; bioRep=6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47033; localization=cell; md5sum=ba1e56927097dcbb30181ba996ba0a1e; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7395; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=6AWC,6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032,LID47033; localization=cell; md5sum=d429167dc88e528aa23ff74b06c5a68d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7793; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=6AWC,6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032,LID47033; localization=cell; md5sum=6e0f41ce5b818348f63527fee2c9a90a; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7377; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=6AWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032; localization=cell; md5sum=85f5379f86b0541328258154f8b99c59; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=324M; spikeInPool=Nist14; strain=C57BL/6J; subId=7373; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=6BWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47033; localization=cell; md5sum=2174d957fe0f6d6e80cf32960604afc5; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=314M; spikeInPool=Nist14; strain=C57BL/6J; subId=7395; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=6AWC; cell=Cortex; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003063; geoSampleAccession=GSM1000563; grant=Gingeras; lab=CSHL; labExpId=LID47032; localization=cell; md5sum=f23511a94189769c5d1abe7954073eb0; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=322M; spikeInPool=Nist14; strain=C57BL/6J; subId=7373; tableName=wgEncodeCshlLongRnaSeqCortexAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqCortexAdult8wksPlusRawRep2.bigWig age=adult-8wks; 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dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002521; grant=Gingeras; lab=CSHL; labExpId=LID20730; localization=cell; md5sum=65d650988e871776098cc5059b215cc8; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.7G; spikeInPool=Nist14; strain=C57BL/6J; subId=7768; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=2AWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002521; grant=Gingeras; lab=CSHL; labExpId=LID20730; localization=cell; md5sum=9ce9cc98e4499b5c3885d0a8f92d7fa6; organism=mouse; 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tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002521; grant=Gingeras; lab=CSHL; labExpId=LID20731; localization=cell; md5sum=be316bd4e0415a47bf506ecad1982154; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7757; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksContigs.bedRnaElements.gz age=adult-8wks; 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grant=Gingeras; lab=CSHL; labExpId=LID20730,LID20731; labVersion=iIDR; localization=cell; md5sum=faeddc99361bb491f2e3593f4eb0bd1f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7081; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=2AWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730; localization=cell; md5sum=b6a6dda146cc5eb910c4e84caa09e51e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.6G; spikeInPool=Nist14; strain=C57BL/6J; subId=5491; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20731; localization=cell; md5sum=f16355c343fad0ad651781e50be24fca; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.7G; spikeInPool=Nist14; strain=C57BL/6J; subId=5498; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=2AWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730; localization=cell; md5sum=5f361f017032567043946781fb39f724; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=5491; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20731; localization=cell; md5sum=5642b1c402e5487ebdd6288c0debc081; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=5498; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=2AWC,2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730,LID20731; labVersion=iIDR; localization=cell; md5sum=9566883f89c209cc0d0e694c876ab5b2; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7081; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=2AWC,2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730,LID20731; labVersion=iIDR; localization=cell; md5sum=761cdc300c4ed2860085747799d7fa54; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=6220; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=2AWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730; localization=cell; md5sum=cdd06c024a50fda791f6a3c7bd0d857a; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=60M; spikeInPool=Nist14; strain=C57BL/6J; subId=5491; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20731; localization=cell; md5sum=43721ac85d56a586b725d8e57cf2c3e7; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=55M; spikeInPool=Nist14; strain=C57BL/6J; subId=5498; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=2AWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730; localization=cell; md5sum=2d6fb3f394acffd36499cffc983bbdc5; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=60M; spikeInPool=Nist14; strain=C57BL/6J; subId=5491; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20731; localization=cell; md5sum=6769183129211c19f85164a74796a643; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=55M; spikeInPool=Nist14; strain=C57BL/6J; subId=5498; tableName=wgEncodeCshlLongRnaSeqDuodAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=2AWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730; localization=cell; md5sum=09f71d8fb192518d6ba9073b232d499e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=73M; spikeInPool=Nist14; strain=C57BL/6J; subId=7768; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20731; localization=cell; md5sum=54695d9c58cea3ff595d78d32620071a; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=72M; spikeInPool=Nist14; strain=C57BL/6J; subId=7757; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqDuodAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=2AWC,2BWC; cell=Duodenum; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002521; geoSampleAccession=GSM900187; grant=Gingeras; lab=CSHL; labExpId=LID20730,LID20731; localization=cell; md5sum=38d5a701541f99ad616305c4413063fc; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=5573; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep1.bam age=adult-8wks; 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organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7393; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep2.bam age=adult-8wks; bioRep=7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; grant=Gingeras; lab=CSHL; labExpId=LID47082; localization=cell; md5sum=136904a664ab73e47d333ab23be4e255; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7385; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep2.bam.bai age=adult-8wks; bioRep=7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; grant=Gingeras; lab=CSHL; labExpId=LID47082; localization=cell; md5sum=24cf45d1792e85f6c8efebf92ad1176a; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7385; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=7AWC,7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081,LID47082; localization=cell; md5sum=07fe86db92bb3a24dc2a159a48df733c; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=16M; spikeInPool=Nist14; strain=C57BL/6J; subId=7384; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=7AWC,7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081,LID47082; localization=cell; md5sum=71ccd09cd4d5a06609c08b27d8e465a2; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=28M; spikeInPool=Nist14; strain=C57BL/6J; subId=7783; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksFastqRd1Rep1.fastq.gz age=adult-8wks; bioRep=7AWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081; localization=cell; md5sum=20e60f95a5f1fad38556fbd9da5dafe8; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=16G; spikeInPool=Nist14; strain=C57BL/6J; subId=7393; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksFastqRd1Rep2.fastq.gz age=adult-8wks; bioRep=7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; 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project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=16G; spikeInPool=Nist14; strain=C57BL/6J; subId=7393; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksFastqRd2Rep2.fastq.gz age=adult-8wks; bioRep=7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47082; localization=cell; md5sum=2b27fb081e4b9152576f498c6f2946af; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7385; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=7AWC,7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081,LID47082; localization=cell; md5sum=6dacc424b67f28d43a4a1d3c403cf9dd; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7783; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=7AWC,7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081,LID47082; localization=cell; md5sum=7f4063d395d5e42f9237cad21b5b389b; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=17M; spikeInPool=Nist14; strain=C57BL/6J; subId=7384; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=7AWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081; localization=cell; md5sum=01fe0a11235eff91a67506fccee0b761; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=372M; spikeInPool=Nist14; strain=C57BL/6J; subId=7393; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47082; localization=cell; md5sum=bc4aa0bca59116d1e0b0c73efa5555eb; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=314M; spikeInPool=Nist14; strain=C57BL/6J; subId=7385; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=7AWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081; localization=cell; md5sum=3d824109e600913c8125b3c32abf664c; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=373M; spikeInPool=Nist14; strain=C57BL/6J; subId=7393; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47082; localization=cell; md5sum=cbcce29f57178937b330dfe2413ff8c6; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=314M; spikeInPool=Nist14; strain=C57BL/6J; subId=7385; tableName=wgEncodeCshlLongRnaSeqFlobeAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksSpikeinsRep1.spikeins age=adult-8wks; bioRep=7AWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081; localization=cell; md5sum=d31fccd5c15fa17ce20b99e3d56a63bd; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=793M; spikeInPool=Nist14; strain=C57BL/6J; subId=7836; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksSpikeinsRep2.spikeins age=adult-8wks; bioRep=7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47082; localization=cell; md5sum=a9a47e563980301994e3c6a1f588dc6e; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=600M; spikeInPool=Nist14; strain=C57BL/6J; subId=7823; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqFlobeAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=7AWC,7BWC; cell=FrontalLobe; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003064; geoSampleAccession=GSM1000562; grant=Gingeras; lab=CSHL; labExpId=LID47081,LID47082; localization=cell; md5sum=d6676e3ffbe38f8ba0eaa0ca2ed40ec7; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=6.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7783; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=4AWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002522; grant=Gingeras; lab=CSHL; labExpId=LID21179; localization=cell; md5sum=1c5d42054b25685a884ec34bd988c773; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=7742; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=4AWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002522; grant=Gingeras; lab=CSHL; labExpId=LID21179; localization=cell; md5sum=c1b05a11d05159d75c6101f2b2368390; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=7742; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002522; grant=Gingeras; lab=CSHL; labExpId=LID21180; localization=cell; md5sum=9741b96f1fc94fb373a393caf105789b; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=9.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=7765; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002522; grant=Gingeras; lab=CSHL; labExpId=LID21180; localization=cell; md5sum=fd724eca2a932817f1b9775b44cd8eb6; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7765; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=4AWC,4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179,LID21180; localization=cell; md5sum=8b79327eab7639c6ee68a0a74df5219c; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=5577; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=4AWC,4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179,LID21180; labVersion=iIDR; localization=cell; md5sum=17e2a47c03bbb627af0d685e7ccecf3c; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7086; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=4AWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179; localization=cell; md5sum=91f72053ffa030d9dc1d2a594d1cf11e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=5482; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21180; localization=cell; md5sum=d48517835dd09c894cdfe2f23945677d; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5488; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=4AWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179; localization=cell; md5sum=dfa139e72dd05736e3c923a34227d7c8; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.8G; spikeInPool=Nist14; strain=C57BL/6J; subId=5482; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21180; localization=cell; md5sum=ba563d89b4cd464ff778ab8268210b16; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.6G; spikeInPool=Nist14; strain=C57BL/6J; subId=5488; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=4AWC,4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179,LID21180; labVersion=iIDR; localization=cell; md5sum=58122dd434f652157a5949e73a37bd36; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7086; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=4AWC,4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179,LID21180; labVersion=iIDR; localization=cell; md5sum=92f9ad241d997357d5a15cbe806c9d33; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=6223; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=4AWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179; localization=cell; md5sum=99fa16bd5fdb26d9514b916dc38ee49f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=127M; spikeInPool=Nist14; strain=C57BL/6J; subId=5482; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21180; localization=cell; md5sum=3795087c89a3076b6d8cb5dd05a801ef; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=144M; spikeInPool=Nist14; strain=C57BL/6J; subId=5488; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=4AWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179; localization=cell; md5sum=3da1307ef55cc40ec9c6dbec6c9ff774; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=128M; spikeInPool=Nist14; strain=C57BL/6J; subId=5482; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21180; localization=cell; md5sum=7e819d69ba8cee9679a89daa99bbb870; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=146M; spikeInPool=Nist14; strain=C57BL/6J; subId=5488; tableName=wgEncodeCshlLongRnaSeqGfatAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=4AWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179; localization=cell; md5sum=a765d40f1f0098b127d3daabcb1f17ea; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=125M; spikeInPool=Nist14; strain=C57BL/6J; subId=7742; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21180; localization=cell; md5sum=0e4a7b92e36e48fb3b1e5c6f4207ceaa; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=124M; spikeInPool=Nist14; strain=C57BL/6J; subId=7765; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqGfatAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=4AWC,4BWC; cell=GenitalFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002522; geoSampleAccession=GSM900190; grant=Gingeras; lab=CSHL; labExpId=LID21179,LID21180; localization=cell; md5sum=95cd9b855546297b7a11ffb2e450c5ec; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=5577; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=16AWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002513; grant=Gingeras; lab=CSHL; labExpId=LID20870; localization=cell; md5sum=fbf73a02c04e8945e6e5e2a157347e2f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.8G; spikeInPool=Nist14; strain=C57BL/6J; subId=7760; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=16AWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002513; grant=Gingeras; lab=CSHL; labExpId=LID20870; localization=cell; md5sum=0c95e76721434894adc078355c28af74; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7760; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002513; grant=Gingeras; lab=CSHL; labExpId=LID20871; localization=cell; md5sum=676e205dcd796f0dd719934c3505b114; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=7761; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002513; grant=Gingeras; lab=CSHL; labExpId=LID20871; localization=cell; md5sum=3181b24b054c4eff4230985b0392b515; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7761; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=16AWC,16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870,LID20871; localization=cell; md5sum=4a9293e7a85115664e2c6e95f09293d6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=10M; spikeInPool=Nist14; strain=C57BL/6J; subId=5570; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=16AWC,16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870,LID20871; labVersion=iIDR; localization=cell; md5sum=837fec4e2824a5c18b3ebce81a2f9a57; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7078; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=16AWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870; localization=cell; md5sum=1b15710857386289e39a93e06bc4ffda; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=5426; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20871; localization=cell; md5sum=3b52ac1a78c39ad11973479e2b023b4e; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=5427; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=16AWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870; localization=cell; md5sum=7bb9c1c323d2fa66d01fbecee3c4443d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=5426; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20871; localization=cell; md5sum=348d6f85de112c739ff649866b372153; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=5427; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=16AWC,16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870,LID20871; labVersion=iIDR; localization=cell; md5sum=7c9d7a9da96af9c33cc9f712e23f69a0; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7078; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=16AWC,16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870,LID20871; labVersion=iIDR; localization=cell; md5sum=6f2d835c42f573315cf1426ad66c74a6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=6217; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=16AWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870; localization=cell; md5sum=205e7438d74163c6a5f6190af76f6419; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=98M; spikeInPool=Nist14; strain=C57BL/6J; subId=5426; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20871; localization=cell; md5sum=c5bfb863450d323bbaec288e364fdd8f; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=89M; spikeInPool=Nist14; strain=C57BL/6J; subId=5427; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=16AWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870; localization=cell; md5sum=51f4e544dc5aceb5f1e74544164a8ef6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=98M; spikeInPool=Nist14; strain=C57BL/6J; subId=5426; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20871; localization=cell; md5sum=9a7d8de8e891746ee59895dacd201685; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=89M; spikeInPool=Nist14; strain=C57BL/6J; subId=5427; tableName=wgEncodeCshlLongRnaSeqHeartAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=16AWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870; localization=cell; md5sum=27bf14376f6233ff5dc74805c1fa1a7f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=116M; spikeInPool=Nist14; strain=C57BL/6J; subId=7760; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20871; localization=cell; md5sum=d706868efd157e532006edd3a7ce2340; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=121M; spikeInPool=Nist14; strain=C57BL/6J; subId=7761; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqHeartAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=16AWC,16BWC; cell=Heart; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002513; geoSampleAccession=GSM900199; grant=Gingeras; lab=CSHL; labExpId=LID20870,LID20871; localization=cell; md5sum=8b247f8dd38c887b20df1bdfd832b86d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=5570; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=17AWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002514; grant=Gingeras; lab=CSHL; labExpId=LID20872; localization=cell; md5sum=e3e141f50c6d15ebcd22218a7d8bb2f1; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=9.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=7756; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=17AWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002514; grant=Gingeras; lab=CSHL; labExpId=LID20872; localization=cell; md5sum=7875a185bf39f700ab0b8c6ee2c065fc; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7756; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002514; grant=Gingeras; lab=CSHL; labExpId=LID20873; localization=cell; md5sum=c5bfa1248e1b5fec7c0038aaea1e97a6; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7774; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002514; grant=Gingeras; lab=CSHL; labExpId=LID20873; localization=cell; md5sum=c257fc2f1434e9413b04d391fca8600c; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7774; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=17AWC,17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872,LID20873; localization=cell; md5sum=3c22f2812358f6eb7a5d7d8e91da8e09; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=13M; spikeInPool=Nist14; strain=C57BL/6J; subId=5571; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=17AWC,17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872,LID20873; labVersion=iIDR; localization=cell; md5sum=64d717035b50a79435f95616a1b938e6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7079; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=17AWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872; localization=cell; md5sum=2214d6a0e51c95aad832d2bb51016d11; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=5434; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20873; localization=cell; md5sum=3c65d78b048edb27c591b34aad41008a; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.6G; spikeInPool=Nist14; strain=C57BL/6J; subId=5439; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=17AWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872; localization=cell; md5sum=bb1dab3f9b60e000da692a3d68f10a00; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=5434; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20873; localization=cell; md5sum=a5965f087919f404eeaf41ad1454dbf4; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=5439; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=17AWC,17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872,LID20873; labVersion=iIDR; localization=cell; md5sum=2ee211275bafaf49b2eea4f6f1b641bd; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7079; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=17AWC,17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872,LID20873; labVersion=iIDR; localization=cell; md5sum=16b128730f15ec29f9b749a2c03b6e50; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=6216; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=17AWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872; localization=cell; md5sum=2a2b36fec9e5314d4dade0c8d77fd992; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=126M; spikeInPool=Nist14; strain=C57BL/6J; subId=5434; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20873; localization=cell; md5sum=1c1ec52e5a484aa64c5eb50d30be01a1; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=127M; spikeInPool=Nist14; strain=C57BL/6J; subId=5439; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=17AWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872; localization=cell; md5sum=026962055c414f4a1a0752297bcce6ed; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=128M; spikeInPool=Nist14; strain=C57BL/6J; subId=5434; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20873; localization=cell; md5sum=b80f74b92ea7ff9fb3e07a209eb8079e; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=128M; spikeInPool=Nist14; strain=C57BL/6J; subId=5439; tableName=wgEncodeCshlLongRnaSeqKidneyAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=17AWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872; localization=cell; md5sum=40cee97763f71840eacea910693ef0df; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=121M; spikeInPool=Nist14; strain=C57BL/6J; subId=7756; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20873; localization=cell; md5sum=906380cce3a4bdc72580238af2928c5e; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=216M; spikeInPool=Nist14; strain=C57BL/6J; subId=7774; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqKidneyAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=17AWC,17BWC; cell=Kidney; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002514; geoSampleAccession=GSM900194; grant=Gingeras; lab=CSHL; labExpId=LID20872,LID20873; localization=cell; md5sum=3626cad061360b5058bbfacca1795f11; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=5571; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=8AWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002523; grant=Gingeras; lab=CSHL; labExpId=LID21183; localization=cell; md5sum=30805742209beb58a0a50db5c3aaf77f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.8G; spikeInPool=Nist14; strain=C57BL/6J; subId=7755; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=8AWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002523; grant=Gingeras; lab=CSHL; labExpId=LID21183; localization=cell; md5sum=60e0e68cc5b6b814a964de725c4c4dff; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7755; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002523; grant=Gingeras; lab=CSHL; labExpId=LID21184; localization=cell; md5sum=5e74154e358700b85889b88cad1dcd32; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=7766; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002523; grant=Gingeras; lab=CSHL; labExpId=LID21184; localization=cell; md5sum=53b556f242133deb16339ccbb091aa9a; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7766; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=8AWC,8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183,LID21184; localization=cell; md5sum=8ca0277e072157c5f0cde745dc4144c1; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=11M; spikeInPool=Nist14; strain=C57BL/6J; subId=5585; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=8AWC,8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183,LID21184; labVersion=iIDR; localization=cell; md5sum=88cc1fc5eeef30bdf414cb3a6773be8b; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=7092; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=8AWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183; localization=cell; md5sum=aeea52fabe75532647fe580491c7a73f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.7G; spikeInPool=Nist14; strain=C57BL/6J; subId=5494; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21184; localization=cell; md5sum=de51e70525556f80d3e62e4d3687e53a; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=5490; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=8AWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183; localization=cell; md5sum=ecd6581bf7414c7de40bdd46eb0e4a0e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=5494; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21184; localization=cell; md5sum=a557800cc25b66a6cebf62f00a7b1573; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=5490; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=8AWC,8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183,LID21184; labVersion=iIDR; localization=cell; md5sum=1b287e2afda0124af62a98b00e696852; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7092; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=8AWC,8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183,LID21184; labVersion=iIDR; localization=cell; md5sum=aae13caef095f745fa2278ec969a31c3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=6231; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=8AWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183; localization=cell; md5sum=3a5ccc2e6841270ef2830abd723ba96c; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=112M; spikeInPool=Nist14; strain=C57BL/6J; subId=5494; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21184; localization=cell; md5sum=d095346ce6d5d3b0870441df00993a58; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=96M; spikeInPool=Nist14; strain=C57BL/6J; subId=5490; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=8AWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183; localization=cell; md5sum=63b99bb0535d3a9f09eb83757fdad8fe; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=113M; spikeInPool=Nist14; strain=C57BL/6J; subId=5494; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21184; localization=cell; md5sum=12100c43ec5b1d8797a5b8ba50488619; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=96M; spikeInPool=Nist14; strain=C57BL/6J; subId=5490; tableName=wgEncodeCshlLongRnaSeqLgintAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=8AWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183; localization=cell; md5sum=2c070d2f3a7a164bf89bac13dd2a983d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=165M; spikeInPool=Nist14; strain=C57BL/6J; subId=7755; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21184; localization=cell; md5sum=8c406a3f1555e41cb0f5e112a91838e3; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=295M; spikeInPool=Nist14; strain=C57BL/6J; subId=7766; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLgintAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=8AWC,8BWC; cell=LgIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002523; geoSampleAccession=GSM900189; grant=Gingeras; lab=CSHL; labExpId=LID21183,LID21184; localization=cell; md5sum=9882762d255ba9f5e6ebeebd1a32410f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=5585; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfAlnRep1.bam age=E14.5; bioRep=29AWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; grant=Gingeras; lab=CSHL; labExpId=LID46985; localization=cell; md5sum=a2880eb12fd37d458eea5ee758d9bd30; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7362; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfAlnRep1.bam.bai age=E14.5; bioRep=29AWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; grant=Gingeras; lab=CSHL; labExpId=LID46985; localization=cell; md5sum=2dbd47480c67ca5be0bdd7d870eba659; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7362; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfAlnRep2.bam age=E14.5; bioRep=29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; grant=Gingeras; lab=CSHL; labExpId=LID46986; localization=cell; md5sum=53e19cef514a5fb90ae941a17d2cc719; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7374; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfAlnRep2.bam.bai age=E14.5; bioRep=29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; grant=Gingeras; lab=CSHL; labExpId=LID46986; localization=cell; md5sum=563baf30e3de82a249683dd37cd598d2; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7374; tableName=wgEncodeCshlLongRnaSeqLimbE14halfAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfContigs.bedRnaElements.gz age=E14.5; bioRep=29AWC,29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985,LID46986; localization=cell; md5sum=4e210c3c61e061982c06fe1ca30dfd4c; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13M; spikeInPool=Nist14; strain=C57BL/6J; subId=7387; tableName=wgEncodeCshlLongRnaSeqLimbE14halfContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfExonsDeNovo.gtf.gz age=E14.5; bioRep=29AWC,29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985,LID46986; localization=cell; md5sum=be3b5e9a791b7ca40465f7167596973e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=26M; spikeInPool=Nist14; strain=C57BL/6J; subId=7795; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfFastqRd1Rep1.fastq.gz age=E14.5; bioRep=29AWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985; localization=cell; md5sum=a9bee3a621217576bf40cee6540c2bb4; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7362; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfFastqRd1Rep2.fastq.gz age=E14.5; bioRep=29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46986; localization=cell; md5sum=bf745b0a1ed857b246ecb2b929b5dc0c; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7374; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfFastqRd2Rep1.fastq.gz age=E14.5; bioRep=29AWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985; localization=cell; md5sum=28067e0c8fc1905858a5770cd9e54c8e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7362; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfFastqRd2Rep2.fastq.gz age=E14.5; bioRep=29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46986; localization=cell; md5sum=06e20e9914ffcc60519acb110c142668; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7374; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfGeneDeNovo.gtf.gz age=E14.5; bioRep=29AWC,29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985,LID46986; localization=cell; md5sum=24b3fcb556e2988d37cd7a60c473ab7d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=4.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7795; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfJunctions.bedRnaElements.gz age=E14.5; bioRep=29AWC,29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985,LID46986; localization=cell; md5sum=744349ef7d3f0a39e5d22a27fb0517d4; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=15M; spikeInPool=Nist14; strain=C57BL/6J; subId=7387; tableName=wgEncodeCshlLongRnaSeqLimbE14halfJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfMinusRawRep1.bigWig age=E14.5; bioRep=29AWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985; localization=cell; md5sum=1fe6bfa73214a0e5cf5f7733884a10c1; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=286M; spikeInPool=Nist14; strain=C57BL/6J; subId=7362; tableName=wgEncodeCshlLongRnaSeqLimbE14halfMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfMinusRawRep2.bigWig age=E14.5; bioRep=29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46986; localization=cell; md5sum=b70a6e63c9983c071fda4a2e243ebdd7; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=249M; spikeInPool=Nist14; strain=C57BL/6J; subId=7374; tableName=wgEncodeCshlLongRnaSeqLimbE14halfMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfPlusRawRep1.bigWig age=E14.5; bioRep=29AWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985; localization=cell; md5sum=039c4d802f4c0382016c37d3ba2627ec; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=291M; spikeInPool=Nist14; strain=C57BL/6J; subId=7362; tableName=wgEncodeCshlLongRnaSeqLimbE14halfPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfPlusRawRep2.bigWig age=E14.5; bioRep=29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46986; localization=cell; md5sum=d4694ce83e8b772b5fef086893ba2a03; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=253M; spikeInPool=Nist14; strain=C57BL/6J; subId=7374; tableName=wgEncodeCshlLongRnaSeqLimbE14halfPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfSpikeinsRep1.spikeins age=E14.5; bioRep=29AWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985; localization=cell; md5sum=6ba32b7cd63cc53d8c1beae30edb403d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=725M; spikeInPool=Nist14; strain=C57BL/6J; subId=7821; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfSpikeinsRep2.spikeins age=E14.5; bioRep=29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46986; localization=cell; md5sum=c4a294abb6281f50344044df7de114da; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=850M; spikeInPool=Nist14; strain=C57BL/6J; subId=7834; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLimbE14halfTranscriptDeNovo.gtf.gz age=E14.5; bioRep=29AWC,29BWC; cell=Limb; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003059; geoSampleAccession=GSM1000568; grant=Gingeras; lab=CSHL; labExpId=LID46985,LID46986; localization=cell; md5sum=3a8e7fa300cc17a4e04d779b2895c0f0; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7795; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=18AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002515; grant=Gingeras; lab=CSHL; labExpId=LID21042; localization=cell; md5sum=5fdd53d6a9391823cf1c2f31a5d66ca2; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=7751; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=18AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002515; grant=Gingeras; lab=CSHL; labExpId=LID21042; localization=cell; md5sum=f0e1a1227aeb57471b55bf0987299796; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7751; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002515; grant=Gingeras; lab=CSHL; labExpId=LID21043; localization=cell; md5sum=5a6fa139d8aa116c0b3c2528821bef85; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=7770; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002515; grant=Gingeras; lab=CSHL; labExpId=LID21043; localization=cell; md5sum=05a7e101579ccade6820dd2dbc87c33d; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7770; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=18AWC,18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042,LID21043; localization=cell; md5sum=cb1da6a2e0a77c24b32a86dd02f73c34; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=5580; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=18AWC,18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042,LID21043; labVersion=iIDR; localization=cell; md5sum=b31a319baf8845960ee11745b772cfcd; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7088; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=18AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042; localization=cell; md5sum=a2fc7b86995cf9aeb831ad1f6aa2e17a; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=5430; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21043; localization=cell; md5sum=d4cb5f15c4761e976f3e8d249f42beb6; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=5432; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=18AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042; localization=cell; md5sum=6ef173f2416abf54fbed69a563f982b6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5430; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21043; localization=cell; md5sum=04a6e21ba48c76bcc55879134649f2ca; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=5432; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=18AWC,18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042,LID21043; labVersion=iIDR; localization=cell; md5sum=be7fec77e0d0344a51369b8656e69501; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7088; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=18AWC,18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042,LID21043; labVersion=iIDR; localization=cell; md5sum=be761ef890c2d8ac9716d203639667a1; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=6226; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=18AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042; localization=cell; md5sum=c284895fc7b0841eea17dd280cd50750; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=68M; spikeInPool=Nist14; strain=C57BL/6J; subId=5430; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21043; localization=cell; md5sum=fd94929a7d7911fb5446931b5c02eb23; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=88M; spikeInPool=Nist14; strain=C57BL/6J; subId=5432; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=18AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042; localization=cell; md5sum=adfafa818af116dacf3cefefc1903dd7; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=68M; spikeInPool=Nist14; strain=C57BL/6J; subId=5430; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21043; localization=cell; md5sum=b3cacc2b89a4b42cd043e91d08b18874; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=89M; spikeInPool=Nist14; strain=C57BL/6J; subId=5432; tableName=wgEncodeCshlLongRnaSeqLiverAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=18AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042; localization=cell; md5sum=b3a21cf478faee48ce97b859e7de0a28; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=115M; spikeInPool=Nist14; strain=C57BL/6J; subId=7751; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21043; localization=cell; md5sum=63bd9b741228fca1908380695e1af8ed; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=117M; spikeInPool=Nist14; strain=C57BL/6J; subId=7770; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=18AWC,18BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002515; geoSampleAccession=GSM900195; grant=Gingeras; lab=CSHL; labExpId=LID21042,LID21043; localization=cell; md5sum=aac71e120277dadebb43d4729abcac5f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=5580; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14AlnRep1.bam age=E14; bioRep=26AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003053; grant=Gingeras; lab=CSHL; labExpId=LID47144; localization=cell; md5sum=17e985f0f62f1027566f802d1124a987; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7343; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14AlnRep1.bam.bai age=E14; bioRep=26AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003053; grant=Gingeras; lab=CSHL; labExpId=LID47144; localization=cell; md5sum=6ea390c9769e64e3ca249b64c911fe82; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=11M; spikeInPool=Nist14; strain=C57BL/6J; subId=7343; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14AlnRep2.bam age=E14; bioRep=26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003053; grant=Gingeras; lab=CSHL; labExpId=LID47145; localization=cell; md5sum=a3cadb7dee855f014ca6f4b8981b72c3; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=33G; spikeInPool=Nist14; strain=C57BL/6J; subId=7371; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14AlnRep2.bam.bai age=E14; bioRep=26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003053; grant=Gingeras; lab=CSHL; labExpId=LID47145; localization=cell; md5sum=ae9ccc87e63be92c4187ebb00b81d0ef; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12M; spikeInPool=Nist14; strain=C57BL/6J; subId=7371; tableName=wgEncodeCshlLongRnaSeqLiverE14AlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14Contigs.bedRnaElements.gz age=E14; bioRep=26AWC,26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144,LID47145; localization=cell; md5sum=64b2e0730d062752446d2b15ef12bbf4; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7383; tableName=wgEncodeCshlLongRnaSeqLiverE14Contigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14ExonsDeNovo.gtf.gz age=E14; bioRep=26AWC,26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144,LID47145; localization=cell; md5sum=62fe859497aad6c881ef3ff00e6808f1; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=21M; spikeInPool=Nist14; strain=C57BL/6J; subId=7794; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14FastqRd1Rep1.fastq.gz age=E14; bioRep=26AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144; localization=cell; md5sum=f74d86349b5ecdcbcad08f0952bd0ef4; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=11G; spikeInPool=Nist14; strain=C57BL/6J; subId=7343; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14FastqRd1Rep2.fastq.gz age=E14; bioRep=26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47145; localization=cell; md5sum=1623536610493855c047e3bcb69ec4b3; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=17G; spikeInPool=Nist14; strain=C57BL/6J; subId=7371; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14FastqRd2Rep1.fastq.gz age=E14; bioRep=26AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144; localization=cell; md5sum=35a40a38e8782909cb1df8266542e3ab; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=11G; spikeInPool=Nist14; strain=C57BL/6J; subId=7343; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14FastqRd2Rep2.fastq.gz age=E14; bioRep=26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47145; localization=cell; md5sum=761753ed2d5dd2da0c2d1d7933eedab8; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=18G; spikeInPool=Nist14; strain=C57BL/6J; subId=7371; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14GeneDeNovo.gtf.gz age=E14; bioRep=26AWC,26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144,LID47145; localization=cell; md5sum=feee858e3f5466f6540906f7ac936c1a; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=2.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7794; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14Junctions.bedRnaElements.gz age=E14; bioRep=26AWC,26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144,LID47145; localization=cell; md5sum=ca57625fa380da681dcea8e0f0743c81; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7383; tableName=wgEncodeCshlLongRnaSeqLiverE14Junctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14MinusRawRep1.bigWig age=E14; bioRep=26AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144; localization=cell; md5sum=c8b93c60c814e90912efce146e909ae3; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=172M; spikeInPool=Nist14; strain=C57BL/6J; subId=7343; tableName=wgEncodeCshlLongRnaSeqLiverE14MinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14MinusRawRep2.bigWig age=E14; bioRep=26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47145; localization=cell; md5sum=7fbc52890656a674b4b88c2fb9b6e243; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=204M; spikeInPool=Nist14; strain=C57BL/6J; subId=7371; tableName=wgEncodeCshlLongRnaSeqLiverE14MinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14PlusRawRep1.bigWig age=E14; bioRep=26AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144; localization=cell; md5sum=41d31f5617ab64bcdc89531884748446; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=174M; spikeInPool=Nist14; strain=C57BL/6J; subId=7343; tableName=wgEncodeCshlLongRnaSeqLiverE14PlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14PlusRawRep2.bigWig age=E14; bioRep=26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47145; localization=cell; md5sum=83c372754f38d7ef8dce5f0d81cfa822; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=207M; spikeInPool=Nist14; strain=C57BL/6J; subId=7371; tableName=wgEncodeCshlLongRnaSeqLiverE14PlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14SpikeinsRep1.spikeins age=E14; bioRep=26AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144; localization=cell; md5sum=502348ae2a26485ab3ab6b601356c498; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=566M; spikeInPool=Nist14; strain=C57BL/6J; subId=7819; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14SpikeinsRep2.spikeins age=E14; bioRep=26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47145; localization=cell; md5sum=fa22f214e962d2215094d55901410e91; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=869M; spikeInPool=Nist14; strain=C57BL/6J; subId=7832; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14TranscriptDeNovo.gtf.gz age=E14; bioRep=26AWC,26BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003053; geoSampleAccession=GSM1000574; grant=Gingeras; lab=CSHL; labExpId=LID47144,LID47145; localization=cell; md5sum=187341e291dc38cea9154daf77675b0a; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=2.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7794; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfAlnRep1.bam age=E14.5; bioRep=28AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; grant=Gingeras; lab=CSHL; labExpId=LID47146; localization=cell; md5sum=c2a131ed1fd552c6ce3e539473df274e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=23G; spikeInPool=Nist14; strain=C57BL/6J; subId=7363; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfAlnRep1.bam.bai age=E14.5; bioRep=28AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; grant=Gingeras; lab=CSHL; labExpId=LID47146; localization=cell; md5sum=24488af32b07bfa0e70fcb85d60439be; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12M; spikeInPool=Nist14; strain=C57BL/6J; subId=7363; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfAlnRep2.bam age=E14.5; bioRep=28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; grant=Gingeras; lab=CSHL; labExpId=LID47147; localization=cell; md5sum=62b7cdd80db0759e8ecd685bb4414ed9; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=15G; spikeInPool=Nist14; strain=C57BL/6J; subId=7366; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfAlnRep2.bam.bai age=E14.5; bioRep=28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; grant=Gingeras; lab=CSHL; labExpId=LID47147; localization=cell; md5sum=972640b0002c40ca2a2ca0e281db484e; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7366; tableName=wgEncodeCshlLongRnaSeqLiverE14halfAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfContigs.bedRnaElements.gz age=E14.5; bioRep=28AWC,28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; localization=cell; md5sum=e63032bc23116aaa26bb58a115de8817; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7344; tableName=wgEncodeCshlLongRnaSeqLiverE14halfContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfExonsDeNovo.gtf.gz age=E14.5; bioRep=28AWC,28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; localization=cell; md5sum=b4bf37191c11a1b66d379313ed926ace; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=19M; spikeInPool=Nist14; strain=C57BL/6J; subId=7785; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfFastqRd1Rep1.fastq.gz age=E14.5; bioRep=28AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146; localization=cell; md5sum=80f7a42197b9fe8fae5542ff5bcdc4ef; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12G; spikeInPool=Nist14; strain=C57BL/6J; subId=7363; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfFastqRd1Rep2.fastq.gz age=E14.5; bioRep=28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47147; localization=cell; md5sum=eae544791a025c2df592543f86f2553f; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=7.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=7366; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfFastqRd2Rep1.fastq.gz age=E14.5; bioRep=28AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146; localization=cell; md5sum=a43f4614b2068eaed0cf94e742ebabe7; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12G; spikeInPool=Nist14; strain=C57BL/6J; subId=7363; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfFastqRd2Rep2.fastq.gz age=E14.5; bioRep=28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47147; localization=cell; md5sum=cd25763737cae2ee36510e7149aed097; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=7.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=7366; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfGeneDeNovo.gtf.gz age=E14.5; bioRep=28AWC,28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; localization=cell; md5sum=da96b265940b9739e7d36f7e1dc1b09b; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=2.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7785; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfJunctions.bedRnaElements.gz age=E14.5; bioRep=28AWC,28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-11; dateUnrestricted=2013-04-11; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; localization=cell; md5sum=57087d452ce994056b4015ea9fad388d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=12M; spikeInPool=Nist14; strain=C57BL/6J; subId=7344; tableName=wgEncodeCshlLongRnaSeqLiverE14halfJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfMinusRawRep1.bigWig age=E14.5; bioRep=28AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146; localization=cell; md5sum=c22484ab53a136c7b124fd4e7e2004bf; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=178M; spikeInPool=Nist14; strain=C57BL/6J; subId=7363; tableName=wgEncodeCshlLongRnaSeqLiverE14halfMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfMinusRawRep2.bigWig age=E14.5; bioRep=28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47147; localization=cell; md5sum=adcffae7ed8be3a31ca616e042312436; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=131M; spikeInPool=Nist14; strain=C57BL/6J; subId=7366; tableName=wgEncodeCshlLongRnaSeqLiverE14halfMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfPlusRawRep1.bigWig age=E14.5; bioRep=28AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146; localization=cell; md5sum=1de3e3566ea87553e9da5115c9ca9eea; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=181M; spikeInPool=Nist14; strain=C57BL/6J; subId=7363; tableName=wgEncodeCshlLongRnaSeqLiverE14halfPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfPlusRawRep2.bigWig age=E14.5; bioRep=28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47147; localization=cell; md5sum=96f7ee17cdefe684ef11402fd4dd2bb2; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=133M; spikeInPool=Nist14; strain=C57BL/6J; subId=7366; tableName=wgEncodeCshlLongRnaSeqLiverE14halfPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfSpikeinsRep1.spikeins age=E14.5; bioRep=28AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146; localization=cell; md5sum=a6b33f8ff1689e56a59f3b7111ba760f; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=501M; spikeInPool=Nist14; strain=C57BL/6J; subId=7822; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfSpikeinsRep2.spikeins age=E14.5; bioRep=28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47147; localization=cell; md5sum=3480748bbc622a6c6b9dee31ccd1b6ae; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=211M; spikeInPool=Nist14; strain=C57BL/6J; subId=7825; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE14halfTranscriptDeNovo.gtf.gz age=E14.5; bioRep=28AWC,28BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003054; geoSampleAccession=GSM1000571; grant=Gingeras; lab=CSHL; labExpId=LID47146,LID47147; localization=cell; md5sum=d6d48ee95f4649618e309dbd2fd0fd79; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=2.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7785; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18AlnRep1.bam age=E18; bioRep=27AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; grant=Gingeras; lab=CSHL; labExpId=LID47148; localization=cell; md5sum=7d3d674ca696aa50f9fc41815af15665; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=31G; spikeInPool=Nist14; strain=C57BL/6J; subId=7390; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18AlnRep1.bam.bai age=E18; bioRep=27AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; grant=Gingeras; lab=CSHL; labExpId=LID47148; localization=cell; md5sum=ddc82e1de8622670a957e144f7958fbc; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=11M; spikeInPool=Nist14; strain=C57BL/6J; subId=7390; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18AlnRep2.bam age=E18; bioRep=27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003060; grant=Gingeras; lab=CSHL; labExpId=LID47149; localization=cell; md5sum=034f491f68817e59d3f21f89d93eb13e; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=26G; spikeInPool=Nist14; strain=C57BL/6J; subId=7372; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18AlnRep2.bam.bai age=E18; bioRep=27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003060; grant=Gingeras; lab=CSHL; labExpId=LID47149; localization=cell; md5sum=a29a803d19fe0bb095bdfe968cd8cc8f; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7372; tableName=wgEncodeCshlLongRnaSeqLiverE18AlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18Contigs.bedRnaElements.gz age=E18; bioRep=27AWC,27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148,LID47149; localization=cell; md5sum=fc92f89953ae255f8adf871800d08ab2; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=11M; spikeInPool=Nist14; strain=C57BL/6J; subId=7392; tableName=wgEncodeCshlLongRnaSeqLiverE18Contigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18ExonsDeNovo.gtf.gz age=E18; bioRep=27AWC,27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148,LID47149; localization=cell; md5sum=3262fc16db2e7d67ee882292986607d3; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=23M; spikeInPool=Nist14; strain=C57BL/6J; subId=7786; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18FastqRd1Rep1.fastq.gz age=E18; bioRep=27AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148; localization=cell; md5sum=85d9a62c0a15844dee053f345c0697ef; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=18G; spikeInPool=Nist14; strain=C57BL/6J; subId=7390; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18FastqRd1Rep2.fastq.gz age=E18; bioRep=27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47149; localization=cell; md5sum=cc520400b8858eff18ac3844f3355986; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=15G; spikeInPool=Nist14; strain=C57BL/6J; subId=7372; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18FastqRd2Rep1.fastq.gz age=E18; bioRep=27AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148; localization=cell; md5sum=2ef47e3060fd33228d4ce10e2ea888e3; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=18G; spikeInPool=Nist14; strain=C57BL/6J; subId=7390; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18FastqRd2Rep2.fastq.gz age=E18; bioRep=27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47149; localization=cell; md5sum=8fced00146c91085b6ffbe8d87de6661; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=15G; spikeInPool=Nist14; strain=C57BL/6J; subId=7372; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18GeneDeNovo.gtf.gz age=E18; bioRep=27AWC,27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148,LID47149; localization=cell; md5sum=b252274f9e60a936b47322d2c8bae96c; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=2.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7786; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18Junctions.bedRnaElements.gz age=E18; bioRep=27AWC,27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148,LID47149; localization=cell; md5sum=54a534146b39a0ca0831db239582faa8; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7392; tableName=wgEncodeCshlLongRnaSeqLiverE18Junctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18MinusRawRep1.bigWig age=E18; bioRep=27AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148; localization=cell; md5sum=c5bb312adfeaac4c60a9f7ffc7bf4536; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=193M; spikeInPool=Nist14; strain=C57BL/6J; subId=7390; tableName=wgEncodeCshlLongRnaSeqLiverE18MinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18MinusRawRep2.bigWig age=E18; bioRep=27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47149; localization=cell; md5sum=21c2f3653b1094fe7b8043e340358796; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=191M; spikeInPool=Nist14; strain=C57BL/6J; subId=7372; tableName=wgEncodeCshlLongRnaSeqLiverE18MinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18PlusRawRep1.bigWig age=E18; bioRep=27AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148; localization=cell; md5sum=8375281c206a60cc3b90eb7bf1779785; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=196M; spikeInPool=Nist14; strain=C57BL/6J; subId=7390; tableName=wgEncodeCshlLongRnaSeqLiverE18PlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18PlusRawRep2.bigWig age=E18; bioRep=27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47149; localization=cell; md5sum=004f05247d200853f647a776a5aff3a9; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=194M; spikeInPool=Nist14; strain=C57BL/6J; subId=7372; tableName=wgEncodeCshlLongRnaSeqLiverE18PlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18SpikeinsRep1.spikeins age=E18; bioRep=27AWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47148; localization=cell; md5sum=5cae8256d9884f2e69f9df7da6f4a6b5; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=772M; spikeInPool=Nist14; strain=C57BL/6J; subId=7830; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLiverE18SpikeinsRep2.spikeins age=E18; bioRep=27BWC; cell=Liver; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003060; geoSampleAccession=GSM1000566; grant=Gingeras; lab=CSHL; labExpId=LID47149; localization=cell; md5sum=928705d95f216a5358d9d2d95ddd832e; 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spikeInPool=Nist14; strain=C57BL/6J; subId=7750; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002516; grant=Gingeras; lab=CSHL; labExpId=LID20921; localization=cell; md5sum=b436e61d83e1f30118a108a14c76da70; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7750; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=15AWC,15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920,LID20921; localization=cell; md5sum=42375f4b462455c08dcbd7f99a2281de; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=13M; spikeInPool=Nist14; strain=C57BL/6J; subId=5572; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=15AWC,15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920,LID20921; labVersion=iIDR; localization=cell; md5sum=86c6c48a5ac6c7d8160210cfeb63e8fc; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7080; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=15AWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920; localization=cell; md5sum=40d258d807a202ca5e86a2452c36c064; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=5428; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20921; localization=cell; md5sum=8dff131251e633eaeedb689a71e7ac7d; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=3.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=5429; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; 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organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=5429; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=15AWC,15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920,LID20921; labVersion=iIDR; localization=cell; md5sum=894b190a92b947de51677629b8ac8eff; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7080; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=15AWC,15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920,LID20921; labVersion=iIDR; localization=cell; md5sum=ee548ec66e1a4d8010470e651c1f1439; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=6218; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=15AWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920; localization=cell; md5sum=2f707336e42e4330bd6c7264cc63589e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=137M; spikeInPool=Nist14; strain=C57BL/6J; subId=5428; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20921; localization=cell; md5sum=a3a04922bd41ad33ca2f240cdb459dea; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=108M; spikeInPool=Nist14; strain=C57BL/6J; subId=5429; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=15AWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920; localization=cell; md5sum=82ea68db0be0f59ceb6d21e57647f618; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=138M; spikeInPool=Nist14; strain=C57BL/6J; subId=5428; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20921; localization=cell; md5sum=834351b39d372254aa3ef414e1c805d7; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=109M; spikeInPool=Nist14; strain=C57BL/6J; subId=5429; tableName=wgEncodeCshlLongRnaSeqLungAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=15AWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920; localization=cell; md5sum=d323b1cdc7f7af24fb4f5ae3bffc755c; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=74M; spikeInPool=Nist14; strain=C57BL/6J; subId=7767; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20921; localization=cell; md5sum=c499512904b81bd770f2cf4390a6aa8c; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=46M; spikeInPool=Nist14; strain=C57BL/6J; subId=7750; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqLungAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=15AWC,15BWC; cell=Lung; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002516; geoSampleAccession=GSM900196; grant=Gingeras; lab=CSHL; labExpId=LID20920,LID20921; localization=cell; md5sum=4582c09679fdba9383fb1c4f2d36d4b4; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=5572; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=22AWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002524; grant=Gingeras; lab=CSHL; labExpId=LID20924; localization=cell; md5sum=da93b8dba68d989dd991a5d0c3047481; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=10G; spikeInPool=Nist14; strain=C57BL/6J; subId=7744; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=22AWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002524; grant=Gingeras; lab=CSHL; labExpId=LID20924; localization=cell; md5sum=45a095c59036c9e523fd65c30ffe49ef; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7744; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002524; grant=Gingeras; lab=CSHL; labExpId=LID20925; localization=cell; md5sum=7ade5dd321734a75bcf684a1496c6382; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.8G; spikeInPool=Nist14; strain=C57BL/6J; subId=7772; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002524; grant=Gingeras; lab=CSHL; labExpId=LID20925; localization=cell; md5sum=4ce01fa5356d444e7ad529c48205829e; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7772; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=22AWC,22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924,LID20925; localization=cell; md5sum=086b4e579b642a0ea6b629dcb0d0f7e7; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=12M; spikeInPool=Nist14; strain=C57BL/6J; subId=5576; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=22AWC,22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924,LID20925; labVersion=iIDR; localization=cell; md5sum=846045da93d6a981757bafd87c4b9694; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7083; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=22AWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924; localization=cell; md5sum=c7618dc7222f1750713800e03efbb890; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=5484; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20925; localization=cell; md5sum=ca187e047d301fab6132c525bd0018e4; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=3.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=5496; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=22AWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924; localization=cell; md5sum=345aaf9e5ccdcded021657bff7fdcbe8; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5484; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20925; localization=cell; md5sum=0eb392b5932743c2c933a2cf486d91cf; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=5496; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=22AWC,22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924,LID20925; labVersion=iIDR; localization=cell; md5sum=ffe0361386079621697475e8904e9ed3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7083; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=22AWC,22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924,LID20925; labVersion=iIDR; localization=cell; md5sum=fa51e207a62865246d9e76e712cc053e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=6221; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=22AWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924; localization=cell; md5sum=ce7ca0045588cf75cd13af461ed8d8cb; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=131M; spikeInPool=Nist14; strain=C57BL/6J; subId=5484; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20925; localization=cell; md5sum=88569548b4bf34aa31f915921ade9406; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=92M; spikeInPool=Nist14; strain=C57BL/6J; subId=5496; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=22AWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924; localization=cell; md5sum=aa162ebdcd7a14135323284c7dce6b7b; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=133M; spikeInPool=Nist14; strain=C57BL/6J; subId=5484; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20925; localization=cell; md5sum=2d078b58e0707686960488a876b033a7; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=94M; spikeInPool=Nist14; strain=C57BL/6J; subId=5496; tableName=wgEncodeCshlLongRnaSeqMamgAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=22AWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924; localization=cell; md5sum=1784e699885e75b49f61246f5f34ec81; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=122M; spikeInPool=Nist14; strain=C57BL/6J; subId=7744; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20925; localization=cell; md5sum=c710f040e65014649b35986501a9e06b; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=39M; spikeInPool=Nist14; strain=C57BL/6J; subId=7772; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqMamgAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=22AWC,22BWC; cell=MammaryGland; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002524; geoSampleAccession=GSM900184; grant=Gingeras; lab=CSHL; labExpId=LID20924,LID20925; localization=cell; md5sum=832f15b6cd720f9dceeafecb16d2c25b; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=5576; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=11AWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002525; grant=Gingeras; lab=CSHL; labExpId=LID20821; localization=cell; md5sum=014514a7b0922b3958c22362168c0ebc; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=7771; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=11AWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002525; grant=Gingeras; lab=CSHL; labExpId=LID20821; localization=cell; md5sum=2cd65ca4622d56a8c57b58b69f96592d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7771; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002525; grant=Gingeras; lab=CSHL; labExpId=LID20822; localization=cell; md5sum=6f7bef4013dc6fff58e9eb385626d04c; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=7743; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002525; grant=Gingeras; lab=CSHL; labExpId=LID20822; localization=cell; md5sum=3aba550a7b1642acfb4b952d3f43e7a9; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.5M; spikeInPool=Nist14; strain=C57BL/6J; subId=7743; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=11AWC,11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821,LID20822; localization=cell; md5sum=536c6627aeb9f8fe77e39e95eb5e181f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=11M; spikeInPool=Nist14; strain=C57BL/6J; subId=5584; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=11AWC,11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821,LID20822; labVersion=iIDR; localization=cell; md5sum=ffe4cab8766f6d37ac92e3f5a763ae6c; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=7093; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=11AWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821; localization=cell; md5sum=143b642bc67085e089034c92fb1cbeba; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=3.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=5495; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20822; localization=cell; md5sum=e4c98bd0554f6a7ace04c93cbe22f1b9; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=3.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=5483; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=11AWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821; localization=cell; md5sum=5467c457176218b0809198060665aac3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=3.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=5495; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20822; localization=cell; md5sum=e3e69249e5583b71bf73ac49b24056f9; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=3.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5483; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=11AWC,11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821,LID20822; labVersion=iIDR; localization=cell; md5sum=e0c4bc68571bba0e9e8f7233e33d6370; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=2.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7093; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=11AWC,11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821,LID20822; labVersion=iIDR; localization=cell; md5sum=f85098890bea24255bc8f3bc8188ae7b; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=6230; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=11AWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821; localization=cell; md5sum=a05f48c82d9d4c70863534f731f44e3f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=104M; spikeInPool=Nist14; strain=C57BL/6J; subId=5495; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20822; localization=cell; md5sum=86943199416f48257ecfa02758687334; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=98M; spikeInPool=Nist14; strain=C57BL/6J; subId=5483; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=11AWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-02; dateUnrestricted=2012-11-02; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821; localization=cell; md5sum=493d9e1a1f38212935ae417a67a54cb7; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=105M; spikeInPool=Nist14; strain=C57BL/6J; subId=5495; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20822; localization=cell; md5sum=f3a19a69f7c32232ba9add1c3f53e998; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=99M; spikeInPool=Nist14; strain=C57BL/6J; subId=5483; tableName=wgEncodeCshlLongRnaSeqOvaryAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=11AWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821; localization=cell; md5sum=4780d50f933cef68f2ecad829d78ca70; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=30M; spikeInPool=Nist14; strain=C57BL/6J; subId=7771; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20822; localization=cell; md5sum=c1b53b0b2b474b884aca22f5c150ffa9; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=35M; spikeInPool=Nist14; strain=C57BL/6J; subId=7743; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqOvaryAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=11AWC,11BWC; cell=Ovary; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002525; geoSampleAccession=GSM900183; grant=Gingeras; lab=CSHL; labExpId=LID20821,LID20822; localization=cell; md5sum=cc14c2dfa07f50e45c5fa8b79374ab3f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=5584; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep1.bam age=adult-8wks; bioRep=10AWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003061; grant=Gingeras; lab=CSHL; labExpId=LID46983; localization=cell; md5sum=d643b27b044340d8cb18c301bdeda80e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=30G; spikeInPool=Nist14; strain=C57BL/6J; subId=7365; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep1.bam.bai age=adult-8wks; bioRep=10AWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003061; grant=Gingeras; lab=CSHL; labExpId=LID46983; localization=cell; md5sum=94985d392151b69ac250c3602f2a4fca; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7365; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep2.bam age=adult-8wks; bioRep=10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003061; grant=Gingeras; lab=CSHL; labExpId=LID46984; localization=cell; md5sum=4c50c3347bd3cc6c6c0932b1d0a6e8c7; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=31G; spikeInPool=Nist14; strain=C57BL/6J; subId=7389; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep2.bam.bai age=adult-8wks; bioRep=10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003061; grant=Gingeras; lab=CSHL; labExpId=LID46984; localization=cell; md5sum=ea4867c1146345a5f1917bc1d0748c41; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=9.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7389; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=10AWC,10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983,LID46984; localization=cell; md5sum=0e58771bb1a14c5e29168e9807e0aa22; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13M; spikeInPool=Nist14; strain=C57BL/6J; subId=7370; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=10AWC,10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983,LID46984; localization=cell; md5sum=04afe780b14494c14009cbd7bfbf3b6f; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=28M; spikeInPool=Nist14; strain=C57BL/6J; subId=7791; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksFastqRd1Rep1.fastq.gz age=adult-8wks; bioRep=10AWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983; localization=cell; md5sum=86d2863ee8f48452d4176f0706fcacb2; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=19G; spikeInPool=Nist14; strain=C57BL/6J; subId=7365; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksFastqRd1Rep2.fastq.gz age=adult-8wks; bioRep=10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46984; localization=cell; md5sum=e961fa35b633bed371949ed8074b8f2b; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=19G; spikeInPool=Nist14; strain=C57BL/6J; subId=7389; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksFastqRd2Rep1.fastq.gz age=adult-8wks; bioRep=10AWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983; localization=cell; md5sum=0fbc2c7550c198ff0bd1dbb825819753; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=19G; spikeInPool=Nist14; strain=C57BL/6J; subId=7365; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksFastqRd2Rep2.fastq.gz age=adult-8wks; bioRep=10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46984; localization=cell; md5sum=9fdf649e2599cd9c2e71d4edbd3ca7cd; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7389; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=10AWC,10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983,LID46984; localization=cell; md5sum=07255045e0d172edbbd8d0e8375a9337; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=3.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7791; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=10AWC,10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983,LID46984; localization=cell; md5sum=bfffdd18df744d6204a3447fdb4a1e25; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=19M; spikeInPool=Nist14; strain=C57BL/6J; subId=7370; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=10AWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983; localization=cell; md5sum=4d19bbae6a057acc75b846cf900e93e8; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=264M; spikeInPool=Nist14; strain=C57BL/6J; subId=7365; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46984; localization=cell; md5sum=6434c862b9d55f65f657f50a8d1a2c30; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=285M; spikeInPool=Nist14; strain=C57BL/6J; subId=7389; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksPlusRawRep1.bigWig age=adult-8wks; 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grant=Gingeras; lab=CSHL; labExpId=LID46984; localization=cell; md5sum=f7cb4053650762610fd5da777e0b5e69; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=288M; spikeInPool=Nist14; strain=C57BL/6J; subId=7389; tableName=wgEncodeCshlLongRnaSeqPlacAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksSpikeinsRep1.spikeins age=adult-8wks; bioRep=10AWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983; localization=cell; md5sum=c5ef9c245fb0e46dc4504c11b8e531e9; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=1007M; spikeInPool=Nist14; strain=C57BL/6J; subId=7826; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksSpikeinsRep2.spikeins age=adult-8wks; bioRep=10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46984; localization=cell; md5sum=59a42389bf55931ca643a9973d9320f8; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=850M; spikeInPool=Nist14; strain=C57BL/6J; subId=7829; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqPlacAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=10AWC,10BWC; cell=Placenta; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003061; geoSampleAccession=GSM1000565; grant=Gingeras; lab=CSHL; labExpId=LID46983,LID46984; localization=cell; md5sum=4494015c9fae4d80222b48982092d2b5; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=4.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7791; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=5AWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002528; grant=Gingeras; lab=CSHL; labExpId=LID21181; localization=cell; md5sum=6aa3ac26e74b7b96176788b7dc625019; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.8G; spikeInPool=Nist14; strain=C57BL/6J; subId=7763; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=5AWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002528; grant=Gingeras; lab=CSHL; labExpId=LID21181; localization=cell; md5sum=38b726c927cd80a9db6c6f5fb8629a42; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7763; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002528; grant=Gingeras; lab=CSHL; labExpId=LID21182; localization=cell; md5sum=ee30ac61ae0e4c012455c970aab0968c; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=7753; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002528; grant=Gingeras; lab=CSHL; labExpId=LID21182; localization=cell; md5sum=7b2050ef9ab8141da76a1b237480c3fc; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7753; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=5AWC,5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181,LID21182; localization=cell; md5sum=05ffb901871eee2052123f911251b46c; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=12M; spikeInPool=Nist14; strain=C57BL/6J; subId=5578; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=5AWC,5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181,LID21182; labVersion=iIDR; localization=cell; md5sum=6fc5b76776c35dd7a58d0458d334d53a; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7085; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=5AWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181; localization=cell; md5sum=4f5d28630a26eda95744fc80bd6d4e6f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5487; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21182; localization=cell; md5sum=11f8c5d69fe90223ba65876ef0c04f8e; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5492; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=5AWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181; localization=cell; md5sum=99010a1a627743fd3ada2fda976a0294; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.6G; spikeInPool=Nist14; strain=C57BL/6J; subId=5487; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21182; localization=cell; md5sum=81b314baf70cc675f9a1400be4dff678; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=5492; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=5AWC,5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181,LID21182; labVersion=iIDR; localization=cell; md5sum=b0b1a539240fb4b45e78d11b27dedff0; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7085; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=5AWC,5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181,LID21182; labVersion=iIDR; localization=cell; md5sum=3d581e60fe8d2496e41a5b346aa1f384; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=6224; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=5AWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181; localization=cell; md5sum=24fc3b46b1e954a6f507faa15a84fc21; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=137M; spikeInPool=Nist14; strain=C57BL/6J; subId=5487; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21182; localization=cell; md5sum=9ed630b679008b5418388e2cc99e9f96; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=115M; spikeInPool=Nist14; strain=C57BL/6J; subId=5492; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=5AWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181; localization=cell; md5sum=67dd18e2e2170c923ef6b06ef3fc50a2; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=139M; spikeInPool=Nist14; strain=C57BL/6J; subId=5487; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21182; localization=cell; md5sum=9151ce8f2cd0bbc3a70c8ed5f29dab7a; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=118M; spikeInPool=Nist14; strain=C57BL/6J; subId=5492; tableName=wgEncodeCshlLongRnaSeqSfatAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=5AWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181; localization=cell; md5sum=1fd45389017603616bd8333826e79c23; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=138M; spikeInPool=Nist14; strain=C57BL/6J; subId=7763; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21182; localization=cell; md5sum=dcae21fa5b55c111346d23dff0e94896; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=142M; spikeInPool=Nist14; strain=C57BL/6J; subId=7753; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSfatAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=5AWC,5BWC; cell=SubcFatPad; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002528; geoSampleAccession=GSM900191; grant=Gingeras; lab=CSHL; labExpId=LID21181,LID21182; localization=cell; md5sum=cf9f8fc5d610b28af6b6acd6877fcf69; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=5578; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=9AWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002526; grant=Gingeras; lab=CSHL; labExpId=LID20819; localization=cell; md5sum=84deb2cd9e1d9560f86dddd19c27145d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.7G; spikeInPool=Nist14; strain=C57BL/6J; subId=7759; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=9AWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002526; grant=Gingeras; lab=CSHL; labExpId=LID20819; localization=cell; md5sum=5eb487e5229677f302a0fb172ef633a7; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7759; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002526; grant=Gingeras; lab=CSHL; labExpId=LID20820; localization=cell; md5sum=2a4fb32f5a1284a0b9af34168486d6b9; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=7745; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002526; grant=Gingeras; lab=CSHL; labExpId=LID20820; localization=cell; md5sum=39c213dcc816b55c5df32dcec30c959f; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7745; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=9AWC,9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819,LID20820; localization=cell; md5sum=ae10c6ea450b63e9b003e9392535265a; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=5574; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=9AWC,9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819,LID20820; labVersion=iIDR; localization=cell; md5sum=ed7feab073dad95eade12f061dcfd7c6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7082; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=9AWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819; localization=cell; md5sum=2aeeeb17acaed6c576fbeb152ab2bb91; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=5499; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20820; localization=cell; md5sum=2fd83d2ac4c0a7db8e570111a9f2ade3; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=5486; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=9AWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819; localization=cell; md5sum=1fa12baf9dae6b28b1b27eb7bb661167; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.4G; spikeInPool=Nist14; strain=C57BL/6J; subId=5499; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20820; localization=cell; md5sum=05ef9479e1469f16cdfdca195a97d3d5; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5486; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=9AWC,9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819,LID20820; labVersion=iIDR; localization=cell; md5sum=1506ae3284efd477a228ecf4a332e0a5; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=1.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7082; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=9AWC,9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819,LID20820; labVersion=iIDR; localization=cell; md5sum=005af6f70bc78d5f60cc42c668a5e481; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=6219; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=9AWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819; localization=cell; md5sum=dfe1fb36b5b18795530e2b529a1ab162; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=64M; spikeInPool=Nist14; strain=C57BL/6J; subId=5499; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20820; localization=cell; md5sum=397ec598661ccaa2f2c3eda82a5ed96f; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=86M; spikeInPool=Nist14; strain=C57BL/6J; subId=5486; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=9AWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819; localization=cell; md5sum=8fc472a270bc5f4cf51f0d4e71d2f3ce; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=64M; spikeInPool=Nist14; strain=C57BL/6J; subId=5499; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20820; localization=cell; md5sum=b9edd94db03d72d74b8b0094e9fc62b7; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=86M; spikeInPool=Nist14; strain=C57BL/6J; subId=5486; tableName=wgEncodeCshlLongRnaSeqSmintAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=9AWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819; localization=cell; md5sum=123f24735bf88e9776556de50dcbfb29; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=47M; spikeInPool=Nist14; strain=C57BL/6J; subId=7759; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20820; localization=cell; md5sum=4fa13866ea6f214969ffcd4071622974; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=45M; spikeInPool=Nist14; strain=C57BL/6J; subId=7745; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSmintAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=9AWC,9BWC; cell=SmIntestine; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002526; geoSampleAccession=GSM900186; grant=Gingeras; lab=CSHL; labExpId=LID20819,LID20820; localization=cell; md5sum=a513f9843370fcaa775f9facad007b9d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=5574; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=13AWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002517; grant=Gingeras; lab=CSHL; labExpId=LID21038; localization=cell; md5sum=0d154d9e52d230113b5779a87ff07d4f; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=7758; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=13AWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002517; grant=Gingeras; lab=CSHL; labExpId=LID21038; localization=cell; md5sum=109ee54b690e5c8b33df33039272f1b4; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7758; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002517; grant=Gingeras; lab=CSHL; labExpId=LID21039; localization=cell; md5sum=03457ae36551ea6c4235671737eef95f; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=7741; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002517; grant=Gingeras; lab=CSHL; labExpId=LID21039; localization=cell; md5sum=fcd469e08671a9b64d2e250ee109ef67; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7741; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqSplAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=13AWC,13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038,LID21039; labVersion=iIDR; localization=cell; md5sum=e2c32140921922edab8676e2c9417b08; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7084; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=13AWC,13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038,LID21039; labVersion=iIDR; localization=cell; md5sum=bbcf78802eb4c5e298f99df6fafdc991; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=2.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=7084; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=13AWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038; localization=cell; md5sum=3044f8692be0847a72b122768c40ba00; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=33M; spikeInPool=Nist14; strain=C57BL/6J; subId=7758; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSplAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21039; localization=cell; md5sum=7838e5c486364fd4a208d9fb30074ebb; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=62M; spikeInPool=Nist14; strain=C57BL/6J; subId=7741; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=13AWC,13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038,LID21039; localization=cell; md5sum=039d5d96313c1e1e900e40edf18d48a3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=11M; spikeInPool=Nist14; strain=C57BL/6J; subId=5575; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=13AWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038; localization=cell; md5sum=e6b19727364985bb9f64a9c4ad62f5cb; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.5G; spikeInPool=Nist14; strain=C57BL/6J; subId=5438; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21039; localization=cell; md5sum=69561ce8ce808cbd1f829c3205f35d2c; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.8G; spikeInPool=Nist14; strain=C57BL/6J; subId=5425; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=13AWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038; localization=cell; md5sum=63ada593efcfba4e1dde0b6a30e3aee3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.7G; spikeInPool=Nist14; strain=C57BL/6J; subId=5438; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21039; localization=cell; md5sum=f82961f80c53e45562b27b7164f05489; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=5425; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=13AWC,13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038,LID21039; labVersion=iIDR; localization=cell; md5sum=b042e285508a89d4410f7963b91bb995; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=6222; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=13AWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038; localization=cell; md5sum=8142ad4f7a2070e5940c34e454a10fe9; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=105M; spikeInPool=Nist14; strain=C57BL/6J; subId=5438; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21039; localization=cell; md5sum=f68826ca23a4f1f562ae6d4757f2bfa8; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=119M; spikeInPool=Nist14; strain=C57BL/6J; subId=5425; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=13AWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038; localization=cell; md5sum=4115f23106bb6a8f487cf1bd28b5b3c3; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=106M; spikeInPool=Nist14; strain=C57BL/6J; subId=5438; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21039; localization=cell; md5sum=671b17da838d02f4f3912ae9f3cbcc93; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=120M; spikeInPool=Nist14; strain=C57BL/6J; subId=5425; tableName=wgEncodeCshlLongRnaSeqSpleenAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqSpleenAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=13AWC,13BWC; cell=Spleen; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002517; geoSampleAccession=GSM900197; grant=Gingeras; lab=CSHL; labExpId=LID21038,LID21039; localization=cell; md5sum=c9f8fb0affc8b05836b0a6dc43acdf5b; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=5575; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=3AWC; cell=Stomach; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002527; grant=Gingeras; lab=CSHL; labExpId=LID20732; localization=cell; md5sum=a5048747ee3608bb9091a672eaa64783; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.7G; spikeInPool=Nist14; strain=C57BL/6J; subId=7773; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=3AWC; cell=Stomach; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002527; grant=Gingeras; lab=CSHL; labExpId=LID20732; localization=cell; md5sum=6376e701670cf5e35d6b95b59d22bc3b; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=4.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7773; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=3BWC; cell=Stomach; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002527; grant=Gingeras; lab=CSHL; labExpId=LID20733; localization=cell; md5sum=27af8306dede10acc647ada1cacaa09b; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=8.0G; spikeInPool=Nist14; strain=C57BL/6J; subId=7748; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=3BWC; cell=Stomach; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002527; grant=Gingeras; lab=CSHL; labExpId=LID20733; localization=cell; md5sum=de82b75478f385228ffadf2e991cffa0; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7748; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqStomAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=3AWC,3BWC; cell=Stomach; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002527; 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subId=5497; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqStomAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=3BWC; cell=Stomach; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-01; dateUnrestricted=2012-11-01; dccAccession=wgEncodeEM002527; geoSampleAccession=GSM900185; grant=Gingeras; lab=CSHL; labExpId=LID20733; localization=cell; md5sum=9a1505b724d30b52778603bcbd0e3a43; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=62M; spikeInPool=Nist14; strain=C57BL/6J; subId=5489; tableName=wgEncodeCshlLongRnaSeqStomAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqStomAdult8wksPlusRawRep1.bigWig age=adult-8wks; 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tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002519; grant=Gingeras; lab=CSHL; labExpId=LID20869; localization=cell; md5sum=d20cfa2862224713f2770262946d0eaf; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=8.2G; spikeInPool=Nist14; strain=C57BL/6J; subId=7747; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002519; grant=Gingeras; lab=CSHL; labExpId=LID20869; localization=cell; md5sum=cbb1d5c1fc4a99fc7bb61ca48d5268db; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=6.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7747; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=12AWC,12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868,LID20869; localization=cell; md5sum=a55e0be980231f22eb2efdc014ecb1b9; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=17M; spikeInPool=Nist14; strain=C57BL/6J; subId=5579; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=12AWC,12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868,LID20869; labVersion=iIDR; localization=cell; md5sum=138b938c443f040eae10127fa772629e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; 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organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=4.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=5440; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-10; dateUnrestricted=2012-10-10; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20869; localization=cell; md5sum=46799d7d70b456bda895c5ee20145b12; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=5.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5448; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=12AWC,12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868,LID20869; labVersion=iIDR; localization=cell; md5sum=44fe058fc788510294d8bdbb334e6f08; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=2.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7087; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=12AWC,12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868,LID20869; labVersion=iIDR; localization=cell; md5sum=0daee33738dc18e3abfeaf746b486346; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=9.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=6225; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=12AWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868; localization=cell; md5sum=6494896b6f9e3aef359082a2e1f8396d; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=146M; spikeInPool=Nist14; strain=C57BL/6J; subId=5440; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-10; dateUnrestricted=2012-10-10; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20869; localization=cell; md5sum=e6bbcd2d1274174f0271d7f1338f883a; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=150M; spikeInPool=Nist14; strain=C57BL/6J; subId=5448; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=12AWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868; localization=cell; md5sum=21026339eb5c691c1ce1913474219c87; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=150M; spikeInPool=Nist14; strain=C57BL/6J; subId=5440; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-10; dateUnrestricted=2012-10-10; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20869; localization=cell; md5sum=d9a78e0013b70c36cbe2993fdc435027; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=154M; spikeInPool=Nist14; strain=C57BL/6J; subId=5448; tableName=wgEncodeCshlLongRnaSeqTestisAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=12AWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868; localization=cell; md5sum=0ba53663e545bd6b5b1468c5e505fed6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=137M; spikeInPool=Nist14; strain=C57BL/6J; subId=7749; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20869; localization=cell; md5sum=b04ecfbe858d2252307cf28831508ab3; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=145M; spikeInPool=Nist14; strain=C57BL/6J; subId=7747; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqTestisAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=12AWC,12BWC; cell=Testis; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002519; geoSampleAccession=GSM900193; grant=Gingeras; lab=CSHL; labExpId=LID20868,LID20869; localization=cell; md5sum=81795845bc2acf9eab930bac03d4e6d6; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=M; size=7.0M; spikeInPool=Nist14; strain=C57BL/6J; subId=5579; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep1V2.bam age=adult-8wks; bioRep=19AWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002518; grant=Gingeras; lab=CSHL; labExpId=LID20922; localization=cell; md5sum=0b65f0b9dc3c4bca808001a8f5283cde; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.9G; spikeInPool=Nist14; strain=C57BL/6J; subId=7754; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep1V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep1V2.bam.bai age=adult-8wks; bioRep=19AWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002518; grant=Gingeras; lab=CSHL; labExpId=LID20922; localization=cell; md5sum=0950d624b85a00f6330e6e249962ce58; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.9M; spikeInPool=Nist14; strain=C57BL/6J; subId=7754; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep1V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep2V2.bam age=adult-8wks; bioRep=19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002518; grant=Gingeras; lab=CSHL; labExpId=LID20923; localization=cell; md5sum=eb4d3e85007fac7d2376eb01d46c8c58; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=11G; spikeInPool=Nist14; strain=C57BL/6J; subId=7746; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep2V2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep2V2.bam.bai age=adult-8wks; bioRep=19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002518; grant=Gingeras; lab=CSHL; labExpId=LID20923; localization=cell; md5sum=ced8419825e2bacfafc4893bb461cc40; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.3M; spikeInPool=Nist14; strain=C57BL/6J; subId=7746; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksAlnRep2V2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksContigs.bedRnaElements.gz age=adult-8wks; bioRep=19AWC,19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922,LID20923; localization=cell; md5sum=31437fad69c795caea65a3c511cb5907; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=13M; spikeInPool=Nist14; strain=C57BL/6J; subId=5582; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksExonsDeNovo.gtf.gz age=adult-8wks; bioRep=19AWC,19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922,LID20923; labVersion=iIDR; localization=cell; md5sum=7b4b0a7b5a8b27777bd7308c3624a5ef; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7090; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksFastqRd1Rep1.fastq.tgz age=adult-8wks; bioRep=19AWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922; localization=cell; md5sum=fa346481f43482e7339b5a8706ab7de0; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.1G; spikeInPool=Nist14; strain=C57BL/6J; subId=5433; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksFastqRd1Rep2.fastq.tgz age=adult-8wks; bioRep=19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20923; localization=cell; md5sum=4707017880c0cd07de604c57b4e56693; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.6G; spikeInPool=Nist14; strain=C57BL/6J; subId=5437; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksFastqRd2Rep1.fastq.tgz age=adult-8wks; bioRep=19AWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922; localization=cell; md5sum=60cd53ec6332fd0a16cbc268067f593e; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=5.3G; spikeInPool=Nist14; strain=C57BL/6J; subId=5433; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksFastqRd2Rep2.fastq.tgz age=adult-8wks; bioRep=19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20923; localization=cell; md5sum=a6c1cb32e535bef8f4e863f39f3d78f6; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.8G; spikeInPool=Nist14; strain=C57BL/6J; subId=5437; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksGeneDeNovo.gtf.gz age=adult-8wks; bioRep=19AWC,19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-06-19; dateUnrestricted=2013-03-19; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922,LID20923; labVersion=iIDR; localization=cell; md5sum=56855351ee6ba54f96b9673a9cfddd70; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=2.2M; spikeInPool=Nist14; strain=C57BL/6J; subId=7090; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksJunctions.bedRnaElements.gz age=adult-8wks; bioRep=19AWC,19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-23; dateUnrestricted=2012-12-23; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922,LID20923; labVersion=iIDR; localization=cell; md5sum=f843a61469fd551dfce9a58dcb834c09; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=7.4M; spikeInPool=Nist14; strain=C57BL/6J; subId=6228; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksMinusRawRep1.bigWig age=adult-8wks; bioRep=19AWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922; localization=cell; md5sum=754291103431ef530b9b1615cf54ec05; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=132M; spikeInPool=Nist14; strain=C57BL/6J; subId=5433; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksMinusRawRep2.bigWig age=adult-8wks; bioRep=19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20923; localization=cell; md5sum=1e366a791c132d42d620664dbc18b6b8; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=163M; spikeInPool=Nist14; strain=C57BL/6J; subId=5437; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksPlusRawRep1.bigWig age=adult-8wks; bioRep=19AWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922; localization=cell; md5sum=27702003bbc52e7b9bb284834ee27d72; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=134M; spikeInPool=Nist14; strain=C57BL/6J; subId=5433; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksPlusRawRep2.bigWig age=adult-8wks; bioRep=19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20923; localization=cell; md5sum=b45f8cdff7fb104b352b78a25f5b728b; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=166M; spikeInPool=Nist14; strain=C57BL/6J; subId=5437; tableName=wgEncodeCshlLongRnaSeqThymusAdult8wksPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksSpikeinsRep1V2.spikeins age=adult-8wks; bioRep=19AWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922; localization=cell; md5sum=3cae1fbb46211ed857bb5ca8de07c681; organism=mouse; project=wgEncode; readType=2x76D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=76M; spikeInPool=Nist14; strain=C57BL/6J; subId=7754; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksSpikeinsRep2V2.spikeins age=adult-8wks; bioRep=19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-29; dateUnrestricted=2013-04-29; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20923; localization=cell; md5sum=6321cc5530984f67c0b3c1a531acb0ed; organism=mouse; project=wgEncode; readType=2x76D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=98M; spikeInPool=Nist14; strain=C57BL/6J; subId=7746; submittedDataVersion=V2 - Previous version had read 2 reverse complemented; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqThymusAdult8wksTranscriptDeNovo.gtf.gz age=adult-8wks; bioRep=19AWC,19BWC; cell=Thymus; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-09; dateUnrestricted=2012-11-09; dccAccession=wgEncodeEM002518; geoSampleAccession=GSM900192; grant=Gingeras; lab=CSHL; labExpId=LID20922,LID20923; localization=cell; md5sum=88f255fc777f0d80f79bc6a3b2efb499; organism=mouse; project=wgEncode; readType=2x76D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2x; sex=U; size=6.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=5582; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep1.bam age=E14.5; bioRep=25AWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-12; dateUnrestricted=2013-04-12; dccAccession=wgEncodeEM003055; grant=Gingeras; lab=CSHL; labExpId=LID46987; localization=cell; md5sum=0a5b9c11a856751fe654e40313193798; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=20G; spikeInPool=Nist14; strain=C57BL/6J; subId=7346; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep1; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep1.bam.bai age=E14.5; bioRep=25AWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-12; dateUnrestricted=2013-04-12; dccAccession=wgEncodeEM003055; grant=Gingeras; lab=CSHL; labExpId=LID46987; localization=cell; md5sum=2be83657d56d287e17e6137526558252; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.6M; spikeInPool=Nist14; strain=C57BL/6J; subId=7346; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep1; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep2.bam age=E14.5; bioRep=25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003055; grant=Gingeras; lab=CSHL; labExpId=LID46988; localization=cell; md5sum=2b3a97bb9632c73ae85a7ce0a32d8522; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=21G; spikeInPool=Nist14; strain=C57BL/6J; subId=7386; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep2; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep2.bam.bai age=E14.5; bioRep=25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003055; grant=Gingeras; lab=CSHL; labExpId=LID46988; localization=cell; md5sum=79c3c2c2143276093f2cd4befcf63531; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=8.8M; spikeInPool=Nist14; strain=C57BL/6J; subId=7386; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfAlnRep2; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfContigs.bedRnaElements.gz age=E14.5; bioRep=25AWC,25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987,LID46988; localization=cell; md5sum=8e555219628528f817bf4e296d9cd3d2; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14M; spikeInPool=Nist14; strain=C57BL/6J; subId=7368; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfContigs; type=bedRnaElements; view=Contigs; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfExonsDeNovo.gtf.gz age=E14.5; bioRep=25AWC,25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987,LID46988; localization=cell; md5sum=3722a2ec14a758eda54ea829e9031ebb; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=26M; spikeInPool=Nist14; strain=C57BL/6J; subId=7784; type=gtf; view=ExonsDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfFastqRd1Rep1.fastq.gz age=E14.5; bioRep=25AWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-12; dateUnrestricted=2013-04-12; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987; localization=cell; md5sum=a66fd8ae01f790b524188fe8e98ea65d; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7346; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfFastqRd1Rep2.fastq.gz age=E14.5; bioRep=25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46988; localization=cell; md5sum=3d24d3d022aa8cffe60a11f3a1d0e24c; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=13G; spikeInPool=Nist14; strain=C57BL/6J; subId=7386; type=fastq; view=FastqRd1; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfFastqRd2Rep1.fastq.gz age=E14.5; bioRep=25AWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-12; dateUnrestricted=2013-04-12; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987; localization=cell; md5sum=e2245378ddaf5712af454705a59ebe49; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7346; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfFastqRd2Rep2.fastq.gz age=E14.5; bioRep=25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46988; localization=cell; md5sum=0c216bfabff62bdc40b7a3c36c6ff7c1; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=14G; spikeInPool=Nist14; strain=C57BL/6J; subId=7386; type=fastq; view=FastqRd2; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfGeneDeNovo.gtf.gz age=E14.5; bioRep=25AWC,25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987,LID46988; localization=cell; md5sum=c90fe2a0bdc02225920d39f6d10cdc9e; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.1M; spikeInPool=Nist14; strain=C57BL/6J; subId=7784; type=gtf; view=GeneDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfJunctions.bedRnaElements.gz age=E14.5; bioRep=25AWC,25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-13; dateUnrestricted=2013-04-13; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987,LID46988; localization=cell; md5sum=677626e67c66fc5c29dd34f1bb6b59da; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=16M; spikeInPool=Nist14; strain=C57BL/6J; subId=7368; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfJunctions; type=bedRnaElements; view=Junctions; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfMinusRawRep1.bigWig age=E14.5; bioRep=25AWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-12; dateUnrestricted=2013-04-12; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987; localization=cell; md5sum=256b55a79b7d3e8cfcd4b7e38090da60; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=296M; spikeInPool=Nist14; strain=C57BL/6J; subId=7346; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfMinusRawRep1; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfMinusRawRep2.bigWig age=E14.5; bioRep=25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46988; localization=cell; md5sum=112ee5b719b2e35661798b0ba7a406ad; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=360M; spikeInPool=Nist14; strain=C57BL/6J; subId=7386; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfMinusRawRep2; type=bigWig; view=MinusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfPlusRawRep1.bigWig age=E14.5; bioRep=25AWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-12; dateUnrestricted=2013-04-12; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987; localization=cell; md5sum=6abc69ad571cf965dd2c8c0821136e62; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=297M; spikeInPool=Nist14; strain=C57BL/6J; subId=7346; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfPlusRawRep1; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfPlusRawRep2.bigWig age=E14.5; bioRep=25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-14; dateUnrestricted=2013-04-14; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46988; localization=cell; md5sum=648c27e62f3e2db0ce323d9d21a80b2e; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=360M; spikeInPool=Nist14; strain=C57BL/6J; subId=7386; tableName=wgEncodeCshlLongRnaSeqWbrainE14halfPlusRawRep2; type=bigWig; view=PlusRawSignal; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfSpikeinsRep1.spikeins age=E14.5; bioRep=25AWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987; localization=cell; md5sum=1f3a7602ce98104a68fc83b4edda39dc; organism=mouse; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=857M; spikeInPool=Nist14; strain=C57BL/6J; subId=7817; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfSpikeinsRep2.spikeins age=E14.5; bioRep=25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-31; dateUnrestricted=2013-05-01; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46988; localization=cell; md5sum=de4feeab5f3cbbd0435bbc10781e3ee6; organism=mouse; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=641M; spikeInPool=Nist14; strain=C57BL/6J; subId=7824; type=spikeins; view=Spikeins; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeCshlLongRnaSeq/wgEncodeCshlLongRnaSeqWbrainE14halfTranscriptDeNovo.gtf.gz age=E14.5; bioRep=25AWC,25BWC; cell=WholeBrain; composite=wgEncodeCshlLongRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-30; dateUnrestricted=2013-04-30; dccAccession=wgEncodeEM003055; geoSampleAccession=GSM1000572; grant=Gingeras; lab=CSHL; labExpId=LID46987,LID46988; localization=cell; md5sum=085e719ea83dfa57d177f75aa489237f; organism=mouse; project=wgEncode; readType=2x101D; replicate=1,2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.7M; spikeInPool=Nist14; strain=C57BL/6J; subId=7784; type=gtf; view=TranscriptDeNovo; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep1.bam age=adult-24wks; cell=BAT; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-08; dateUnrestricted=2012-12-08; dccAccession=wgEncodeEM002635; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep1; labVersion=7/28/2011 Lane 3A; localization=cell; md5sum=bd1fca8cbdc3ecb4f64c9f93e2d7daa4; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=468M; softwareVersion=TopHat; strain=C57BL/6; subId=5969; tableName=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep1.bam.bai age=adult-24wks; cell=BAT; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-08; dateUnrestricted=2012-12-08; dccAccession=wgEncodeEM002635; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep1; labVersion=7/28/2011 Lane 3A; localization=cell; md5sum=4f0712dbb8dbdeed543d2f33f52778c5; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=3.6M; softwareVersion=TopHat; strain=C57BL/6; subId=5969; tableName=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep2.bam age=adult-24wks; cell=BAT; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-08; dateUnrestricted=2012-12-08; dccAccession=wgEncodeEM002635; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep2; labVersion=7/28/2011 Lane 3B; localization=cell; md5sum=963a76ab96b12fd546d03321093aa0f5; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=500M; softwareVersion=TopHat; strain=C57BL/6; subId=5969; tableName=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep2.bam.bai age=adult-24wks; cell=BAT; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-08; dateUnrestricted=2012-12-08; dccAccession=wgEncodeEM002635; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6Rep2; labVersion=7/28/2011 Lane 3B; localization=cell; md5sum=81afcbe3e9f0290fd2d56e7237e4683b; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=3.9M; softwareVersion=TopHat; strain=C57BL/6; subId=5969; tableName=wgEncodeLicrRnaSeqBatCellPapMAdult24wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=BoneMarrow; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001706; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6Rep1; labVersion=09/08/10 Lane 4G; localization=cell; md5sum=14237a1ad3e88c4963346688087910d1; organism=mouse; project=wgEncode; readType=1x30; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=511M; softwareVersion=TopHat; strain=C57BL/6; subId=4094; tableName=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=BoneMarrow; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001706; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6Rep1; labVersion=09/08/10 Lane 4G; localization=cell; md5sum=6af4b8e00935a5c2146ae5b5a3a13f6f; organism=mouse; project=wgEncode; readType=1x30; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.0M; softwareVersion=TopHat; strain=C57BL/6; subId=4094; tableName=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=BoneMarrow; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001706; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6Rep2; labVersion=09/08/10 Lane 4H; localization=cell; md5sum=7ed3746b848be72621e6a4ccf231575f; organism=mouse; project=wgEncode; readType=1x30; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=530M; softwareVersion=TopHat; strain=C57BL/6; subId=4094; tableName=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=BoneMarrow; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001706; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6Rep2; labVersion=09/08/10 Lane 4H; localization=cell; md5sum=d3a25f473d4d4668d9d440c6a65d831c; organism=mouse; project=wgEncode; readType=1x30; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.9M; softwareVersion=TopHat; strain=C57BL/6; subId=4094; tableName=wgEncodeLicrRnaSeqBmarrowCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=BMDM; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-10; dateUnrestricted=2012-12-09; dccAccession=wgEncodeEM002636; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6Rep1; labVersion=7/28/2011 Lane 2C; localization=cell; md5sum=575960679611e95a112ad25cce8d37d3; organism=mouse; project=wgEncode; readType=1x30; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=730M; softwareVersion=TopHat; strain=C57BL/6; subId=5966; tableName=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=BMDM; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-10; dateUnrestricted=2012-12-09; dccAccession=wgEncodeEM002636; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6Rep1; labVersion=7/28/2011 Lane 2C; localization=cell; md5sum=dab3e8e4c9448fe51dcd6eda8852b301; organism=mouse; project=wgEncode; readType=1x30; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=5.0M; softwareVersion=TopHat; strain=C57BL/6; subId=5966; tableName=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=BMDM; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-10; dateUnrestricted=2012-12-09; dccAccession=wgEncodeEM002636; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6Rep2; labVersion=7/28/2011 Lane 2D; localization=cell; md5sum=967ea81cc1d620c0605cdba4d0d093e1; organism=mouse; project=wgEncode; readType=1x30; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=585M; softwareVersion=TopHat; strain=C57BL/6; subId=5966; tableName=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=BMDM; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-10; dateUnrestricted=2012-12-09; dccAccession=wgEncodeEM002636; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6Rep2; labVersion=7/28/2011 Lane 2D; localization=cell; md5sum=0861e50f7a560881fd189a0e3ecb6d9f; organism=mouse; project=wgEncode; readType=1x30; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=5.1M; softwareVersion=TopHat; strain=C57BL/6; subId=5966; tableName=wgEncodeLicrRnaSeqBmdmCellPapFAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Cerebellum; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001710; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6Rep1; labVersion=03/16/10 Lane 2; localization=cell; md5sum=8da723d235d2b5e19950f5d5ca45394e; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=695M; softwareVersion=TopHat; strain=C57BL/6; subId=4095; tableName=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Cerebellum; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001710; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6Rep1; labVersion=03/16/10 Lane 2; localization=cell; md5sum=d5a85a2216c7939b90316f8667512907; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.7M; softwareVersion=TopHat; strain=C57BL/6; subId=4095; tableName=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Cerebellum; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001710; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6Rep2; labVersion=03/16/10 Lane 3; localization=cell; md5sum=5027d18a5bf6319620e935863a178d0e; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=875M; softwareVersion=TopHat; strain=C57BL/6; subId=4095; tableName=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Cerebellum; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001710; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6Rep2; labVersion=03/16/10 Lane 3; localization=cell; md5sum=d835d29b627a329e0baeec74bfcf7817; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.9M; softwareVersion=TopHat; strain=C57BL/6; subId=4095; tableName=wgEncodeLicrRnaSeqCbellumCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Cortex; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001711; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6Rep1; labVersion=03/15/10 Lane 1; localization=cell; md5sum=6a770ca539e22727b255ab31d14d6630; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=640M; softwareVersion=TopHat; strain=C57BL/6; subId=4096; tableName=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Cortex; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001711; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6Rep1; labVersion=03/15/10 Lane 1; localization=cell; md5sum=8f8ac55627b64f3cd532ed7d92a787f3; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.7M; softwareVersion=TopHat; strain=C57BL/6; subId=4096; tableName=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Cortex; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001711; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6Rep2; labVersion=03/15/10 Lane 2; localization=cell; md5sum=ffb8bbd7bba53b1199d5357901e76086; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=830M; softwareVersion=TopHat; strain=C57BL/6; subId=4096; tableName=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Cortex; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001711; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6Rep2; labVersion=03/15/10 Lane 2; localization=cell; md5sum=a07a095bdb9fb742063641bd5c78451f; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.9M; softwareVersion=TopHat; strain=C57BL/6; subId=4096; tableName=wgEncodeLicrRnaSeqCortexCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqEsb4CellPapME0C57bl6AlnRep1.bam age=E0; cell=ES-Bruce4; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001707; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqEsb4CellPapME0C57bl6Rep1; labVersion=10/13/10 Lane 4A; localization=cell; md5sum=b3333bb37c9e71cc87bcdec4580c60d8; organism=mouse; project=wgEncode; readType=1x30; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1020M; softwareVersion=TopHat; strain=C57BL/6; subId=4102; tableName=wgEncodeLicrRnaSeqEsb4CellPapME0C57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqEsb4CellPapME0C57bl6AlnRep1.bam.bai age=E0; cell=ES-Bruce4; 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cell=Heart; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001712; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqHeartCellPapMAdult8wksC57bl6Rep1; labVersion=03/10/10 Lane 1; localization=cell; md5sum=f94072db798f77ab8bfbb31090c79939; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.0M; softwareVersion=TopHat; strain=C57BL/6; subId=4097; tableName=wgEncodeLicrRnaSeqHeartCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqHeartCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Heart; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001712; grant=Ren; 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cell=Heart; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-04; dccAccession=wgEncodeEM002391; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqHeartCellPapUE14halfC57bl6Rep2; labVersion=4/29/11 Lane 1; localization=cell; md5sum=b05dd27a39b8e845f29bd8c52cf41aa9; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=974M; softwareVersion=TopHat; strain=C57BL/6; subId=5422; tableName=wgEncodeLicrRnaSeqHeartCellPapUE14halfC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqHeartCellPapUE14halfC57bl6AlnRep2.bam.bai age=E14.5; cell=Heart; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-04; dccAccession=wgEncodeEM002391; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqHeartCellPapUE14halfC57bl6Rep2; labVersion=4/29/11 Lane 1; localization=cell; md5sum=5fd829d00fad2dcac46d3c2d65ed0a3c; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=4.9M; softwareVersion=TopHat; strain=C57BL/6; subId=5422; tableName=wgEncodeLicrRnaSeqHeartCellPapUE14halfC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Kidney; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001713; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6Rep1; labVersion=03/15/10 Lane 3; localization=cell; md5sum=22b8617e5391dcf7246784fe82c154bc; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=656M; softwareVersion=TopHat; strain=C57BL/6; subId=4098; tableName=wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Kidney; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001713; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6Rep1; labVersion=03/15/10 Lane 3; localization=cell; md5sum=c86f3a70d91e0a6d2ecf96afc70fbc37; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.1M; softwareVersion=TopHat; strain=C57BL/6; subId=4098; tableName=wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Kidney; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001713; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6Rep2; labVersion=03/15/10 Lane 4; localization=cell; md5sum=eb4c39ed1151d670ea90e922ebec56ff; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=749M; softwareVersion=TopHat; strain=C57BL/6; subId=4098; tableName=wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqKidneyCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; 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type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLimbCellPapUE14halfC57bl6AlnRep2.bam.bai age=E14.5; cell=Limb; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002387; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLimbCellPapUE14halfC57bl6Rep2; labVersion=11/10/10 Lane 5; localization=cell; md5sum=481926032b5ce6c3f94e3c0776149df4; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.0M; softwareVersion=TopHat; strain=C57BL/6; subId=5396; tableName=wgEncodeLicrRnaSeqLimbCellPapUE14halfC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001714; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep1; labVersion=03/02/10 Lane 3; localization=cell; md5sum=8190233ef599431709351de3690fcffc; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=627M; softwareVersion=TopHat; strain=C57BL/6; subId=4099; tableName=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001714; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep1; labVersion=03/02/10 Lane 3; localization=cell; md5sum=ffe95756d895aeec9b6a3ec09307f16e; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.3M; softwareVersion=TopHat; strain=C57BL/6; subId=4099; tableName=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001714; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep2; labVersion=03/02/10 Lane 4; localization=cell; md5sum=633a3b0d8ab37f7cac048fa31d8ca554; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=657M; softwareVersion=TopHat; strain=C57BL/6; subId=4099; tableName=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001714; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6Rep2; labVersion=03/02/10 Lane 4; localization=cell; md5sum=2c606d5efeacecc64590c05aec3e0e0b; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.4M; softwareVersion=TopHat; strain=C57BL/6; subId=4099; tableName=wgEncodeLicrRnaSeqLiverCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6AlnRep1.bam age=E14.5; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-04; dccAccession=wgEncodeEM002392; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6Rep1; labVersion=11/10/10 Lane 5; localization=cell; md5sum=dc5f293b35ae8d3ef4d0ee7c378f180c; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=766M; softwareVersion=TopHat; strain=C57BL/6; subId=5423; tableName=wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6AlnRep1.bam.bai age=E14.5; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-04; dccAccession=wgEncodeEM002392; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6Rep1; labVersion=11/10/10 Lane 5; localization=cell; md5sum=9410629fd1ad68574325b5cad9cd97e1; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=4.8M; softwareVersion=TopHat; strain=C57BL/6; subId=5423; tableName=wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6AlnRep2.bam age=E14.5; cell=Liver; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-05; dateUnrestricted=2012-10-04; dccAccession=wgEncodeEM002392; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6Rep2; 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sex=U; size=5.0M; softwareVersion=TopHat; strain=C57BL/6; subId=5423; tableName=wgEncodeLicrRnaSeqLiverCellPapUE14halfC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Lung; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001715; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6Rep1; labVersion=03/10/10 Lane 5; localization=cell; md5sum=49f7bf22c064adca9c1308b064367a85; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=544M; softwareVersion=TopHat; strain=C57BL/6; subId=4100; tableName=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Lung; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001715; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6Rep1; labVersion=03/10/10 Lane 5; localization=cell; md5sum=9ccca606351138abc58b68a01f11bf4a; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.8M; softwareVersion=TopHat; strain=C57BL/6; subId=4100; tableName=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Lung; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001715; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6Rep2; labVersion=03/10/10 Lane 6; localization=cell; md5sum=733c0c951014489448774e26775a6b7a; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=600M; softwareVersion=TopHat; strain=C57BL/6; subId=4100; tableName=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Lung; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-12; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001715; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6Rep2; labVersion=03/10/10 Lane 6; localization=cell; md5sum=7e58d4676d8c7cbe19d70102bd2d0386; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.7M; softwareVersion=TopHat; strain=C57BL/6; subId=4100; tableName=wgEncodeLicrRnaSeqLungCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=MEF; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001708; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep1; labVersion=03/15/10 Lane 5; localization=cell; md5sum=5a06b9f4580636592c7f92080da63f46; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=696M; softwareVersion=TopHat; strain=C57BL/6; subId=4101; tableName=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=MEF; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001708; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep1; labVersion=03/15/10 Lane 5; localization=cell; md5sum=59e5e3eb4f542b22b3b6745e403c7ebe; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=3.8M; softwareVersion=TopHat; strain=C57BL/6; subId=4101; tableName=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=MEF; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001708; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep2; labVersion=03/15/10 Lane 6; localization=cell; md5sum=b479c86706e2f4c016c1872375b804db; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=698M; softwareVersion=TopHat; strain=C57BL/6; subId=4101; tableName=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=MEF; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001708; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6Rep2; labVersion=03/15/10 Lane 6; localization=cell; md5sum=65e2ddec8d81b43c5fa2e2a249ade4fd; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.1M; softwareVersion=TopHat; strain=C57BL/6; subId=4101; tableName=wgEncodeLicrRnaSeqMefCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6AlnRep1.bam age=immortalized; cell=MEL; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; dccAccession=wgEncodeEM002634; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6Rep1; labVersion=6/20/2011 Lane 2B; localization=cell; md5sum=2e8a3f2b9724a3d862083f3115eff3c2; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1.1G; softwareVersion=TopHat; strain=Unknown; subId=5958; tableName=wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6AlnRep1.bam.bai age=immortalized; cell=MEL; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; dccAccession=wgEncodeEM002634; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6Rep1; labVersion=6/20/2011 Lane 2B; localization=cell; md5sum=77c9f9de5e9ef2ea11aa43200eaff61d; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.9M; softwareVersion=TopHat; strain=Unknown; subId=5958; tableName=wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; 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dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-29; dateUnrestricted=2012-11-29; dccAccession=wgEncodeEM002634; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6Rep2; labVersion=6/20/2011 Lane 2C; localization=cell; md5sum=39b53a0e88533daf9ea6da3f6f1b8218; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.7M; softwareVersion=TopHat; strain=Unknown; subId=5958; tableName=wgEncodeLicrRnaSeqMelCellPapMImmortalC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=OlfactBulb; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-21; dateUnrestricted=2012-09-20; dccAccession=wgEncodeEM002385; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep1; labVersion=10/13/10 Lane 6; localization=cell; md5sum=a8aac341fecdd9c7bce105de85e20031; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=142M; softwareVersion=TopHat; strain=C57BL/6; subId=5274; tableName=wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=OlfactBulb; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-21; dateUnrestricted=2012-09-20; dccAccession=wgEncodeEM002385; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep1; labVersion=10/13/10 Lane 6; localization=cell; md5sum=51b02c444e9f76e1ff580920af22c5fe; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.6M; softwareVersion=TopHat; strain=C57BL/6; subId=5274; tableName=wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=OlfactBulb; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-21; dateUnrestricted=2012-09-20; dccAccession=wgEncodeEM002385; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6Rep2; labVersion=10/13/10 Lane 6; localization=cell; md5sum=affcfcbec33ccbbece65ee59d6c88a2a; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=169M; softwareVersion=TopHat; strain=C57BL/6; subId=5274; tableName=wgEncodeLicrRnaSeqOlfactCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; 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dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002393; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep1; labVersion=10/13/10 Lane 4; localization=cell; md5sum=e091d59b8797814c483518ed0e7d78bb; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=809M; softwareVersion=TopHat; strain=C57BL/6; subId=5445; tableName=wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Placenta; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002393; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep1; 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sex=F; size=678M; softwareVersion=TopHat; strain=C57BL/6; subId=5445; tableName=wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Placenta; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-06; dateUnrestricted=2012-10-05; dccAccession=wgEncodeEM002393; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6Rep2; labVersion=10/13/10 Lane 4; localization=cell; md5sum=e95d192cc7dca13645537a3502967984; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=4.8M; softwareVersion=TopHat; strain=C57BL/6; subId=5445; tableName=wgEncodeLicrRnaSeqPlacCellPapFAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; 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dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002388; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep1; labVersion=11/4/10 Lane 6; localization=cell; md5sum=6fce46cf2165ffb9fdfbc45205157c11; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.2M; softwareVersion=TopHat; strain=C57BL/6; subId=5394; tableName=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=SmIntestine; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002388; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2; labVersion=11/4/10 Lane 6; localization=cell; md5sum=fbae6aba896895a6d0b4989b00995e51; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1.1G; softwareVersion=TopHat; strain=C57BL/6; subId=5394; tableName=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=SmIntestine; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002388; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6Rep2; labVersion=11/4/10 Lane 6; localization=cell; md5sum=0b7ce668e48490c5edfaf1aa5dff5908; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.1M; softwareVersion=TopHat; strain=C57BL/6; subId=5394; tableName=wgEncodeLicrRnaSeqSmintCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Spleen; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001709; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep1; labVersion=03/10/10 Lane 3; localization=cell; md5sum=ff20f1d7352d444de01b67a93732eefe; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=517M; softwareVersion=TopHat; strain=C57BL/6; subId=4103; tableName=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; 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dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001709; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2; labVersion=03/10/10 Lane 4; localization=cell; md5sum=92dfac8fda769647565582c9f44d46bb; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=559M; softwareVersion=TopHat; strain=C57BL/6; subId=4103; tableName=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Spleen; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-05-11; dateUnrestricted=2012-02-11; dccAccession=wgEncodeEM001709; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6Rep2; labVersion=03/10/10 Lane 4; localization=cell; md5sum=13628f1af0f460d431621ac74d8a7841; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_GA2; sex=M; size=4.6M; softwareVersion=TopHat; strain=C57BL/6; subId=4103; tableName=wgEncodeLicrRnaSeqSpleenCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Testis; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002389; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6Rep1; labVersion=10/13/10 Lane 5; localization=cell; md5sum=4f7f7dd21ed0e075fa67c43946795929; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=95M; softwareVersion=TopHat; strain=C57BL/6; subId=5395; tableName=wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Testis; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002389; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6Rep1; labVersion=10/13/10 Lane 5; localization=cell; md5sum=fe648dd5fdbdbf5aca1e096dbd9c1e70; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.4M; softwareVersion=TopHat; strain=C57BL/6; subId=5395; tableName=wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; 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dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002389; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6Rep2; labVersion=10/13/10 Lane 5; localization=cell; md5sum=6036eb1b031ee0b811ca7752708bc143; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.3M; softwareVersion=TopHat; strain=C57BL/6; subId=5395; tableName=wgEncodeLicrRnaSeqTestisCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Thymus; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-21; dateUnrestricted=2012-09-20; dccAccession=wgEncodeEM002386; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6Rep1; labVersion=10/13/10 Lane 6; localization=cell; md5sum=48c701d073912c839caa6cd0999c1868; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=335M; softwareVersion=TopHat; strain=C57BL/6; subId=5275; tableName=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Thymus; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-21; dateUnrestricted=2012-09-20; dccAccession=wgEncodeEM002386; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6Rep1; labVersion=10/13/10 Lane 6; localization=cell; md5sum=19ee2342439d6385680de89efe5f8bbf; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.9M; softwareVersion=TopHat; strain=C57BL/6; subId=5275; tableName=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Thymus; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-21; dateUnrestricted=2012-09-20; dccAccession=wgEncodeEM002386; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6Rep2; labVersion=10/13/10 Lane 6; localization=cell; md5sum=560959996ae63c5e2ab373dcd160cb97; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=305M; softwareVersion=TopHat; strain=C57BL/6; subId=5275; tableName=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Thymus; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-21; dateUnrestricted=2012-09-20; dccAccession=wgEncodeEM002386; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6Rep2; labVersion=10/13/10 Lane 6; localization=cell; md5sum=e3999bdc0bd4c4d2cb250ebf49e31543; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.8M; softwareVersion=TopHat; strain=C57BL/6; subId=5275; tableName=wgEncodeLicrRnaSeqThymusCellPapMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep1.bam age=E14.5; cell=WholeBrain; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002390; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6Rep1; labVersion=11/10/10 Lane 5; localization=cell; md5sum=4f67120ea5ac8c37014222672c3e6dfa; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=778M; softwareVersion=TopHat; strain=C57BL/6; subId=5397; tableName=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep1.bam.bai age=E14.5; cell=WholeBrain; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002390; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6Rep1; labVersion=11/10/10 Lane 5; localization=cell; md5sum=b9f2dac3cfe8e27973f3bb9bd5312440; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.0M; softwareVersion=TopHat; strain=C57BL/6; subId=5397; tableName=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep2.bam age=E14.5; cell=WholeBrain; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002390; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6Rep2; labVersion=11/10/10 Lane 5; localization=cell; md5sum=00d0743dbf08746aa75d8058f75542a2; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=714M; softwareVersion=TopHat; strain=C57BL/6; subId=5397; tableName=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeLicrRnaSeq/wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep2.bam.bai age=E14.5; cell=WholeBrain; composite=wgEncodeLicrRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-01-04; dateUnrestricted=2012-10-03; dccAccession=wgEncodeEM002390; grant=Ren; lab=LICR-m; labExpId=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6Rep2; labVersion=11/10/10 Lane 5; localization=cell; md5sum=553eb8966f4b6b0b0634e2272fe8747c; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=longPolyA; seqPlatform=Illumina_HiSeq_2000; sex=U; size=5.0M; softwareVersion=TopHat; strain=C57BL/6; subId=5397; tableName=wgEncodeLicrRnaSeqWbrainCellPapUE14halfC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep1.bam age=immortalized; cell=CH12; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003177; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41Rep1; localization=cell; md5sum=b008209c8ea2903cc102c9821617af63; organism=mouse; project=wgEncode; readType=1x41; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=F; size=1.1G; strain=B10.H-2aH-4bp/Wts; subId=6538; tableName=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep1.bam.bai age=immortalized; cell=CH12; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003177; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41Rep1; localization=cell; md5sum=2b4c297c616fc6c92fcf356e4af15bbb; organism=mouse; project=wgEncode; readType=1x41; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=F; size=3.6M; strain=B10.H-2aH-4bp/Wts; subId=6538; tableName=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep2.bam age=immortalized; cell=CH12; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003177; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41Rep2; localization=cell; md5sum=823dad184a4afb76312d469bf23fe088; organism=mouse; project=wgEncode; readType=1x41; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=F; size=1.2G; strain=B10.H-2aH-4bp/Wts; subId=6538; tableName=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep2.bam.bai age=immortalized; cell=CH12; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003177; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41Rep2; localization=cell; md5sum=dbcb89e90c3d4054a4d33e3538393a8b; organism=mouse; project=wgEncode; readType=1x41; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=F; size=3.5M; strain=B10.H-2aH-4bp/Wts; subId=6538; tableName=wgEncodePsuRnaSeqCh12FImmortal2a4bR1x41AlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep1.bam age=E14.5; cell=Erythrobl; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003180; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dRep1; localization=cell; md5sum=3b8511e048d6ade5f7682b8507b38ddb; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=9.5G; strain=CD-1; subId=7568; tableName=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep1.bam.bai age=E14.5; cell=Erythrobl; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003180; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dRep1; localization=cell; md5sum=fb11f06d4bdfcb4f06858c7c6e36352f; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=8.2M; strain=CD-1; subId=7568; tableName=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep2.bam age=E14.5; cell=Erythrobl; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003180; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dRep2; localization=cell; md5sum=889564d13b2b3aef854ae05a38205869; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=7.5G; strain=CD-1; subId=7568; tableName=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep2.bam.bai age=E14.5; cell=Erythrobl; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003180; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dRep2; localization=cell; md5sum=3eafdc35cce37bb20e68808ca371a9ec; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=8.2M; strain=CD-1; subId=7568; tableName=wgEncodePsuRnaSeqErythroblBE14halfCd1R2x99dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep1.bam age=adult-10-12wks; cell=FVLstem; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003182; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dRep1; localization=cell; md5sum=2c60661c710aa32e1b0df07d99bc7081; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=4.3G; strain=BALB/cJ; subId=7566; tableName=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep1.bam.bai age=adult-10-12wks; cell=FVLstem; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003182; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dRep1; localization=cell; md5sum=c367b1db32e08b094f10e6c87aa684e6; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=4.8M; strain=BALB/cJ; subId=7566; tableName=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep2.bam age=adult-10-12wks; cell=FVLstem; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003182; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dRep2; localization=cell; md5sum=3dc391ad637a8f7cf24a8ad80d6562b1; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=4.2G; strain=BALB/cJ; subId=7566; tableName=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep2.bam.bai age=adult-10-12wks; cell=FVLstem; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003182; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dRep2; localization=cell; md5sum=a5db31c5d021821a2188b4f88954150c; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=5.1M; strain=BALB/cJ; subId=7566; tableName=wgEncodePsuRnaSeqFvlsBAdult810wksBalbcjR2x99dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep1.bam age=adult-10-12wks; cell=FVprogenitor; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003181; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dRep1; localization=cell; md5sum=a5fef839302b001783b1a6ae91bf6808; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=5.7G; strain=BALB/cJ; subId=7567; tableName=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep1.bam.bai age=adult-10-12wks; cell=FVprogenitor; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003181; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dRep1; localization=cell; md5sum=f218f71cb74ec01179672344274095df; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=5.1M; strain=BALB/cJ; subId=7567; tableName=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep2.bam age=adult-10-12wks; cell=FVprogenitor; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003181; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dRep2; localization=cell; md5sum=e27fccf49ff3e0504f04c55051d036d8; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=5.3G; strain=BALB/cJ; subId=7567; tableName=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep2.bam.bai age=adult-10-12wks; cell=FVprogenitor; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-20; dateUnrestricted=2013-04-20; dccAccession=wgEncodeEM003181; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dRep2; localization=cell; md5sum=6f354e11ab2150cbc2b3723a7f96ec7e; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=5.3M; strain=BALB/cJ; subId=7567; tableName=wgEncodePsuRnaSeqFvpBAdult810wksBalbcjR2x99dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R1x36AlnRep1.bam age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003178; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R1x36Rep1; localization=cell; md5sum=903e982787f84747d8a94f4388831055; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=1.3G; strain=129; subId=6543; tableName=wgEncodePsuRnaSeqG1eME0S129R1x36AlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R1x36AlnRep1.bam.bai age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003178; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R1x36Rep1; localization=cell; md5sum=799356e15d12423112e10f6432f21a7c; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=5.3M; strain=129; subId=6543; tableName=wgEncodePsuRnaSeqG1eME0S129R1x36AlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R1x55AlnRep2.bam age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003178; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R1x55Rep2; localization=cell; md5sum=4e7219708e0c2bb39331f092ab33ad26; organism=mouse; project=wgEncode; readType=1x55; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=2.9G; strain=129; subId=6543; tableName=wgEncodePsuRnaSeqG1eME0S129R1x55AlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R1x55AlnRep2.bam.bai age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003178; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R1x55Rep2; localization=cell; md5sum=2de641196f1e956d38f9defd203b53ad; organism=mouse; project=wgEncode; readType=1x55; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=4.5M; strain=129; subId=6543; tableName=wgEncodePsuRnaSeqG1eME0S129R1x55AlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep1.bam age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003183; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R2x99dRep1; localization=cell; md5sum=6e5f2905b534305cdbb6e78d37f5a7df; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=11G; strain=129; subId=7565; tableName=wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep1.bam.bai age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003183; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R2x99dRep1; localization=cell; md5sum=612a4d0cc24821d34276d94cd568d399; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.6M; strain=129; subId=7565; tableName=wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep2.bam age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003183; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R2x99dRep2; localization=cell; md5sum=4903e8b35f0a893cb45811d65ab591ab; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=12G; strain=129; subId=7565; tableName=wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep2.bam.bai age=E0; cell=G1E; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003183; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eME0S129R2x99dRep2; localization=cell; md5sum=101bcde53a22683d261700b245485614; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.4M; strain=129; subId=7565; tableName=wgEncodePsuRnaSeqG1eME0S129R2x99dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep1.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003179; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hRep1; localization=cell; md5sum=46a0ea35a3cc27a334978506a7bec7db; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=702M; strain=129; subId=6539; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep1; treatment=diffProtD_24hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep1.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003179; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hRep1; localization=cell; md5sum=4b34a985e001676588848236f25fb381; organism=mouse; project=wgEncode; readType=1x36; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=3.2M; strain=129; subId=6539; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep1; treatment=diffProtD_24hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep2.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003179; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hRep2; localization=cell; md5sum=b72913711f7d2f15c760289396b6dc38; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=652M; strain=129; subId=6539; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep2; treatment=diffProtD_24hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep2.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; dccAccession=wgEncodeEM003179; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hRep2; localization=cell; md5sum=3c64a5550a3d874a313fbb84ea3fb577; organism=mouse; project=wgEncode; readType=1x36; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_GA2x; sex=M; size=3.2M; strain=129; subId=6539; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R1x36Diffd24hAlnRep2; treatment=diffProtD_24hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep1.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003187; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dRep1; localization=cell; md5sum=e18849447d5fecde4c7875678780677c; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=11G; strain=129; subId=7606; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep1.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003187; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dRep1; localization=cell; md5sum=c54a855e8e4a4a66602994f6d446716f; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.7M; strain=129; subId=7606; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep2.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003187; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dRep2; localization=cell; md5sum=ea016b2c02a49fa980eb542993d71aff; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=7.7G; strain=129; subId=7606; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep2.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003187; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dRep2; localization=cell; md5sum=3cf06079bbf5867f8b5dd4299131aad2; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=3.9M; strain=129; subId=7606; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep1.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003185; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hRep1; localization=cell; md5sum=fe2ad4c75174e2d620d4a30ed243acb8; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=6.2G; strain=129; subId=7608; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep1; treatment=diffProtD_14hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep1.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003185; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hRep1; localization=cell; md5sum=5352ef19735657144cbb6a84a105c6c6; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.0M; strain=129; subId=7608; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep1; treatment=diffProtD_14hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep2.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003185; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hRep2; localization=cell; md5sum=18f2ce1352f87315f62460494cca6f33; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=9.1G; strain=129; subId=7608; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep2; treatment=diffProtD_14hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep2.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003185; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hRep2; localization=cell; md5sum=4914db1ddebe7f985d5a004f66e2f778; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.5M; strain=129; subId=7608; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd14hAlnRep2; treatment=diffProtD_14hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep1.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003189; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hRep1; localization=cell; md5sum=ee4590c9afa38678f47f67261b6e4c1f; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=11G; strain=129; subId=7659; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep1; treatment=diffProtD_24hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep1.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003189; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hRep1; localization=cell; md5sum=6004736744999f204f913975162b1143; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.7M; strain=129; subId=7659; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep1; treatment=diffProtD_24hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep2.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003189; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hRep2; localization=cell; md5sum=7ed0adccc4e4c1b1a979f0ed9c065b26; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=2.6G; strain=129; subId=7659; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep2; treatment=diffProtD_24hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep2.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003189; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hRep2; localization=cell; md5sum=203985b73c5e494a43f1063458ca3e7b; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.6M; strain=129; subId=7659; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd24hAlnRep2; treatment=diffProtD_24hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep1.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; dccAccession=wgEncodeEM003192; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hRep1; localization=cell; md5sum=10d48ecb323d0189200d9c09f4d3ba13; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=12G; strain=129; subId=7706; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep1; treatment=diffProtD_30hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep1.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; dccAccession=wgEncodeEM003192; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hRep1; localization=cell; md5sum=a9d159b1429d193029550bc1b4d8be36; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.1M; strain=129; subId=7706; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep1; treatment=diffProtD_30hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep2.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; dccAccession=wgEncodeEM003192; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hRep2; localization=cell; md5sum=5210abff62b23b82aa9b68ec9af98f90; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=9.4G; strain=129; subId=7706; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep2; treatment=diffProtD_30hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep2.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-27; dateUnrestricted=2013-04-27; dccAccession=wgEncodeEM003192; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hRep2; localization=cell; md5sum=780e2223081db08d16e93557c77d373e; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.1M; strain=129; subId=7706; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd30hAlnRep2; treatment=diffProtD_30hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep1.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003188; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hRep1; localization=cell; md5sum=943915cff286dcae07c241be8aa3a295; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.6G; strain=129; subId=7607; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep1; treatment=diffProtD_3hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep1.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003188; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hRep1; localization=cell; md5sum=fcaf4188246fb8f5d75d7a5e136ffe2e; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.7M; strain=129; subId=7607; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep1; treatment=diffProtD_3hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep2.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003188; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hRep2; localization=cell; md5sum=3c63d365b1f2fbf3f0f31468e47ee738; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=8.8G; strain=129; subId=7607; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep2; treatment=diffProtD_3hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep2.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-25; dccAccession=wgEncodeEM003188; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hRep2; localization=cell; md5sum=878f93fb5087617b26534b34eb274543; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.2M; strain=129; subId=7607; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd3hAlnRep2; treatment=diffProtD_3hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep1.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003186; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hRep1; localization=cell; md5sum=c4b58c29728588f0d56c20f236e6ca1a; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=8.7G; strain=129; subId=7609; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep1; treatment=diffProtD_7hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep1.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003186; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hRep1; localization=cell; md5sum=6f351ac19871c54ea547b832aa50420d; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.4M; strain=129; subId=7609; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep1; treatment=diffProtD_7hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep2.bam age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003186; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hRep2; localization=cell; md5sum=5ab117266e75275ebdcb8995797deacc; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=6.9G; strain=129; subId=7609; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep2; treatment=diffProtD_7hr; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep2.bam.bai age=E0; cell=G1E-ER4; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-25; dateUnrestricted=2013-04-24; dccAccession=wgEncodeEM003186; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hRep2; localization=cell; md5sum=3e31129001eadd040d82a6d4323c9b80; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.0M; strain=129; subId=7609; tableName=wgEncodePsuRnaSeqG1eer4ME0S129R2x99dDiffd7hAlnRep2; treatment=diffProtD_7hr; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep1.bam age=E14.5; cell=Megakaryo; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-28; dateUnrestricted=2013-04-28; dccAccession=wgEncodeEM003193; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dRep1; localization=cell; md5sum=1e11f1f89b709bdf1d51e2f15f4601a3; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=7.2G; strain=CD-1; subId=7733; tableName=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep1.bam.bai age=E14.5; cell=Megakaryo; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-28; dateUnrestricted=2013-04-28; dccAccession=wgEncodeEM003193; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dRep1; localization=cell; md5sum=16be0a08b7129cadd21ea15352e5448d; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=4.4M; strain=CD-1; subId=7733; tableName=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep2.bam age=E14.5; cell=Megakaryo; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-28; dateUnrestricted=2013-04-28; dccAccession=wgEncodeEM003193; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dRep2; labVersion=Only ~2x3.5M reads mapped out of 2x101M total (low map %). But the coverage tracks resemble those of Megakaryo RNA Rep1, so this dataset was submitted; localization=cell; md5sum=07e981ea128b032b24f6520bdedd44b1; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=521M; strain=CD-1; subId=7733; tableName=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep2.bam.bai age=E14.5; cell=Megakaryo; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-28; dateUnrestricted=2013-04-28; dccAccession=wgEncodeEM003193; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dRep2; labVersion=Only ~2x3.5M reads mapped out of 2x101M total (low map %). But the coverage tracks resemble those of Megakaryo RNA Rep1, so this dataset was submitted; localization=cell; md5sum=5ffbcfb26b33df4ba1ac4fb85cacbbca; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=B; size=4.4M; strain=CD-1; subId=7733; tableName=wgEncodePsuRnaSeqMegakaryoBE14halfCd1R2x99dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep1.bam age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003190; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Rep1; localization=cell; md5sum=2aeebf3bfde81d478595e11878c9e268; organism=mouse; project=wgEncode; readType=1x45; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=6.7G; strain=Unknown; subId=7704; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep1.bam.bai age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003190; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Rep1; localization=cell; md5sum=3f9395935d018834f6a00d1b6d228ad3; organism=mouse; project=wgEncode; readType=1x45; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.2M; strain=Unknown; subId=7704; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep2.bam age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003190; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Rep2; localization=cell; md5sum=1f7b502b99d0aeb81a2dac02b46e539d; organism=mouse; project=wgEncode; readType=1x45; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=7.9G; strain=Unknown; subId=7704; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep2.bam.bai age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003190; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Rep2; localization=cell; md5sum=d4f300b0a89548519d0b3e942a2905c9; organism=mouse; project=wgEncode; readType=1x45; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.2M; strain=Unknown; subId=7704; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45AlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep1.bam age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003191; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dRep1; localization=cell; md5sum=3876ab0a173929be16b1d38359625264; organism=mouse; project=wgEncode; readType=1x45; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=7.6G; strain=Unknown; subId=7703; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep1; treatment=DMSO_2.0pct; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep1.bam.bai age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003191; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dRep1; localization=cell; md5sum=1d3c0a9f937d70c14d8c59da10185848; organism=mouse; project=wgEncode; readType=1x45; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.3M; strain=Unknown; subId=7703; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep1; treatment=DMSO_2.0pct; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep2.bam age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003191; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dRep2; localization=cell; md5sum=a1e916513586d5feeeb8b360041b0b95; organism=mouse; project=wgEncode; readType=1x45; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.1G; strain=Unknown; subId=7703; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep2; treatment=DMSO_2.0pct; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep2.bam.bai age=immortalized; cell=MEL; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-26; dateUnrestricted=2013-04-26; dccAccession=wgEncodeEM003191; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dRep2; localization=cell; md5sum=870dd5ea1ab6635f659c5aa11104d0c8; organism=mouse; project=wgEncode; readType=1x45; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.2M; strain=Unknown; subId=7703; tableName=wgEncodePsuRnaSeqMelMImmortalUknR1x45Dm2p5dAlnRep2; treatment=DMSO_2.0pct; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep1.bam age=adult-5wks; cell=MEP; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003184; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dRep1; localization=cell; md5sum=169f35bc39efb309f6cf6cbd8773eab1; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=12G; strain=C57BL/6J; subId=7570; tableName=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep1.bam.bai age=adult-5wks; cell=MEP; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003184; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dRep1; localization=cell; md5sum=29482a30ed943ee66ef28dc065cc472b; organism=mouse; project=wgEncode; readType=2x99D; replicate=1; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=5.1M; strain=C57BL/6J; subId=7570; tableName=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep2.bam age=adult-5wks; cell=MEP; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003184; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dRep2; localization=cell; md5sum=7564ca82378687bad7ebf3b678a6f14c; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=11G; strain=C57BL/6J; subId=7570; tableName=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodePsuRnaSeq/wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep2.bam.bai age=adult-5wks; cell=MEP; composite=wgEncodePsuRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-07-23; dateUnrestricted=2013-04-22; dccAccession=wgEncodeEM003184; grant=Hardison; lab=PSU-m; labExpId=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dRep2; localization=cell; md5sum=7ac9a0918759e4bb6dc1289852f42c3a; organism=mouse; project=wgEncode; readType=2x99D; replicate=2; rnaExtract=polyA; seqPlatform=Illumina_HiSeq_2000; sex=F; size=5.4M; strain=C57BL/6J; subId=7570; tableName=wgEncodePsuRnaSeqMepFAdult5wksC57bl6jR2x99dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep1.bam age=immortalized; cell=CH12; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002000; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep1; localization=cell; md5sum=181b6a033fb87d90b4df44149ea995fa; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=F; size=1.1G; strain=B10.H-2aH-4bp/Wts; subId=6812; tableName=wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep1.bam.bai age=immortalized; cell=CH12; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002000; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep1; localization=cell; md5sum=a26cf4be47e50f669c617226b0bada65; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=F; size=3.5M; strain=B10.H-2aH-4bp/Wts; subId=6812; tableName=wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep2.bam age=immortalized; cell=CH12; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002000; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep2; localization=cell; md5sum=b9e13b5a8caaf213665033d4053d0c87; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=F; size=1.2G; strain=B10.H-2aH-4bp/Wts; subId=6812; tableName=wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep2.bam.bai age=immortalized; cell=CH12; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002000; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqCh12RibozerogR2x101dRep2; localization=cell; md5sum=5320b28b9b845d86406332d9537d5d71; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=F; size=3.7M; strain=B10.H-2aH-4bp/Wts; subId=6812; tableName=wgEncodeSydhRnaSeqCh12RibozerogR2x101dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep1.bam age=E0; cell=ES-E14; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002899; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqEse14RibozerogR2x101dRep1; localization=cell; md5sum=7070e0166de1de0df5fdc558239b3ea8; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1.4G; strain=129/Ola; subId=6813; tableName=wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep1.bam.bai age=E0; cell=ES-E14; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002899; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqEse14RibozerogR2x101dRep1; localization=cell; md5sum=e8b21f7203119f75ed1aaa9463fe585b; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.5M; strain=129/Ola; subId=6813; tableName=wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep2.bam age=E0; cell=ES-E14; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002899; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqEse14RibozerogR2x101dRep2; localization=cell; md5sum=37aed37e31a7e13f108451c5cfd3c39d; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1.5G; strain=129/Ola; subId=6813; tableName=wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep2.bam.bai age=E0; cell=ES-E14; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM002899; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqEse14RibozerogR2x101dRep2; localization=cell; md5sum=671de5e2e94c3ecb3731ad58523a70f9; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.5M; strain=129/Ola; subId=6813; tableName=wgEncodeSydhRnaSeqEse14RibozerogR2x101dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep1.bam age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM001998; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dRep1; localization=cell; md5sum=11c3aafaeb957b07d8a1da7cc908d823; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1.8G; strain=Unknown; subId=6814; tableName=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep1; treatment=DMSO_2.0pct; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep1.bam.bai age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM001998; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dRep1; localization=cell; md5sum=eb9c2fa884ad05de9ad8ac578d1c3fc7; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=5.0M; strain=Unknown; subId=6814; tableName=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep1; treatment=DMSO_2.0pct; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep2.bam age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM001998; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dRep2; localization=cell; md5sum=c03a4b7e2446b61241959aedf6f6433e; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1.9G; strain=Unknown; subId=6814; tableName=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep2; treatment=DMSO_2.0pct; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep2.bam.bai age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-04-19; dateUnrestricted=2013-01-19; dccAccession=wgEncodeEM001998; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dRep2; localization=cell; md5sum=a9e319df67d33a554eea0fc685b620a8; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.6M; strain=Unknown; subId=6814; tableName=wgEncodeSydhRnaSeqMelDm2p5dRibozerogR2x101dAlnRep2; treatment=DMSO_2.0pct; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep1.bam age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-05-01; dateUnrestricted=2013-02-01; dccAccession=wgEncodeEM001999; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelRibozerogR2x101dRep1; localization=cell; md5sum=e3d2148fc438fc7eb79452a94ebe4363; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=2.0G; strain=Unknown; subId=6815; tableName=wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep1; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep1.bam.bai age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-05-01; dateUnrestricted=2013-02-01; dccAccession=wgEncodeEM001999; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelRibozerogR2x101dRep1; localization=cell; md5sum=901ba1357078abb79b4c2d9a101d9a5c; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=1; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.2M; strain=Unknown; subId=6815; tableName=wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep1; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep2.bam age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-05-01; dateUnrestricted=2013-02-01; dccAccession=wgEncodeEM001999; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelRibozerogR2x101dRep2; localization=cell; md5sum=38f8b98ff41ff4e7d4fc0757e17b36cd; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=1.1G; strain=Unknown; subId=6815; tableName=wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep2; treatment=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeSydhRnaSeq/wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep2.bam.bai age=immortalized; cell=MEL; composite=wgEncodeSydhRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Jul 2012 Freeze; dateSubmitted=2012-05-01; dateUnrestricted=2013-02-01; dccAccession=wgEncodeEM001999; grant=Snyder; lab=Stanford-m; labExpId=wgEncodeSydhRnaSeqMelRibozerogR2x101dRep2; localization=cell; md5sum=f95ea9e19d8d9c5bad302e495be2ddc8; organism=mouse; origAssembly=mm9; project=wgEncode; readType=2x101D; replicate=2; rnaExtract=riboZeroGold; seqPlatform=Illumina_HiSeq_2000; sex=M; size=4.4M; strain=Unknown; subId=6815; tableName=wgEncodeSydhRnaSeqMelRibozerogR2x101dAlnRep2; treatment=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep1.bam age=immortalized; cell=416B; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-24; dateUnrestricted=2012-03-24; dccAccession=wgEncodeEM002947; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=8c2ddb0bd9c34adf71174758619d9a52; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.2G; strain=B6D2F1/J; subId=4346; tableName=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep1.bam.bai age=immortalized; cell=416B; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-24; dateUnrestricted=2012-03-24; dccAccession=wgEncodeEM002947; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=2662f3c2afc15b8bcbbaea162582f145; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.3M; strain=B6D2F1/J; subId=4346; tableName=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep2.bam age=immortalized; cell=416B; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-24; dateUnrestricted=2012-03-24; dccAccession=wgEncodeEM002947; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=2bb12c0e69933a5bcfb5f7b9af2073f6; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=2.2G; strain=B6D2F1/J; subId=4348; tableName=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep2.bam.bai age=immortalized; cell=416B; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-24; dateUnrestricted=2012-03-24; dccAccession=wgEncodeEM002947; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=68234e64e0f171cdbdceec991864d2f2; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.3M; strain=B6D2F1/J; subId=4348; tableName=wgEncodeUwRnaSeq416bCellPolyaMImmortalB6d2f1jAlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep1.bam age=immortalized; cell=A20; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM002948; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=5bf20c41dc6578b4c8f407937f486b98; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.0G; strain=BALB/cAnN; subId=4428; tableName=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep1.bam.bai age=immortalized; cell=A20; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM002948; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=98a4f0435223c1c536baa93675afe54d; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.3M; strain=BALB/cAnN; subId=4428; tableName=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep2.bam age=immortalized; cell=A20; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002948; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=242ed7c8e4b54d42c9e52f30d6e13438; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=2.2G; strain=BALB/cAnN; subId=5323; tableName=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep2.bam.bai age=immortalized; cell=A20; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002948; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=a0ee9ababf32308104789c4e034ffece; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.3M; strain=BALB/cAnN; subId=5323; tableName=wgEncodeUwRnaSeqA20CellPolyaMImmortalBalbcannAlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=B-cell_(CD19+); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002951; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=cda2ad8c54825f0ec59bd55868f14bcf; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=4.3G; strain=C57BL/6; subId=5329; tableName=wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=B-cell_(CD19+); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002951; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=d484b8d6201bfc761782daea9b573137; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.5M; strain=C57BL/6; subId=5329; tableName=wgEncodeUwRnaSeqBcellcd19pCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=B-cell_(CD43-); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002952; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=566364bb913334816132a480ea413f20; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=4.6G; strain=C57BL/6; subId=5331; tableName=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=B-cell_(CD43-); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002952; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=e4f6fb211ad50a2dc76366ff51c535d3; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.2M; strain=C57BL/6; subId=5331; tableName=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=B-cell_(CD43-); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002952; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=c6e85857d5cdfb4494c789525528ce56; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=1.4G; strain=C57BL/6; subId=5330; tableName=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=B-cell_(CD43-); composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002952; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=e4e731ae639d76093029e3ed2d5da59e; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.1M; strain=C57BL/6; subId=5330; tableName=wgEncodeUwRnaSeqBcellcd43nCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Cerebellum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001986; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=c5e8cbeb750231b7efcbbf5f50673125; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.6G; strain=C57BL/6; subId=4429; tableName=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Cerebellum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001986; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=e6cbcfc9098347a2caa8a34334b5e216; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.5M; strain=C57BL/6; subId=4429; tableName=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Cerebellum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-13; dateUnrestricted=2012-11-12; dccAccession=wgEncodeEM001986; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=d264b6f7f2f269f7fdd6880123a14655; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=3.8G; strain=C57BL/6; subId=5588; tableName=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Cerebellum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-13; dateUnrestricted=2012-11-12; dccAccession=wgEncodeEM001986; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=677148748f81663cf790920da746756f; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.7M; strain=C57BL/6; subId=5588; tableName=wgEncodeUwRnaSeqCbellumCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Cerebrum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001987; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=1e6277e2277ab1cb38c081797b1a345e; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.7G; strain=C57BL/6; subId=4430; tableName=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Cerebrum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001987; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=f3ca63f3603fdaf31711e2cb7e7e0d5d; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.3M; strain=C57BL/6; subId=4430; tableName=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Cerebrum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001987; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=dac0e890db8d462cb4e6d69788c7183e; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=3.1G; strain=C57BL/6; subId=4431; tableName=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Cerebrum; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001987; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=b57bb08367b825105c1e0ef7d13c33f8; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.5M; strain=C57BL/6; subId=4431; tableName=wgEncodeUwRnaSeqCerebrumCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=FatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001988; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=e1450bcae28036259937fa519d104337; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=1.7G; strain=C57BL/6; subId=4432; tableName=wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=FatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001988; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=0e00fe275bf59e79005e286ee2fb0b41; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.1M; strain=C57BL/6; subId=4432; tableName=wgEncodeUwRnaSeqFatCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=GenitalFatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002953; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=b3ebdaeea2c848a7f45b94cb79939aa5; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.5G; strain=C57BL/6; subId=5324; tableName=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=GenitalFatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002953; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=1ec4568fd16a584cf7c4dbdb3d83d464; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.0M; strain=C57BL/6; subId=5324; tableName=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=GenitalFatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002953; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=aee426ea796d3a9395e3b166001743a3; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=1.9G; strain=C57BL/6; subId=5325; tableName=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=GenitalFatPad; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002953; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=849387ebd8a2f238dedd248b47fb7b65; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.1M; strain=C57BL/6; subId=5325; tableName=wgEncodeUwRnaSeqGfatCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Heart; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002954; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=810859a012e60ac608e4528084255fff; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=1.8G; strain=C57BL/6; subId=5326; tableName=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Heart; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002954; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=d2652cb132fb5e0b16dc4139ccc4886a; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.1M; strain=C57BL/6; subId=5326; tableName=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Heart; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002954; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=72ecd91f046d71ed64f7628e27d0212d; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=2.7G; strain=C57BL/6; subId=5327; tableName=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Heart; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002954; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=ba4efea81c76ca6eeacb78293c0d8cf4; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.3M; strain=C57BL/6; subId=5327; tableName=wgEncodeUwRnaSeqHeartCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqHlembryoCellPolyaME11halfCd1AlnRep1.bam age=E11.5; cell=HeadlessEmbryo; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001989; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqHlembryoCellPolyaME11halfCd1Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=904d05999a187f05ce61aeb0e8a23c1e; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.9G; strain=CD-1; subId=4423; tableName=wgEncodeUwRnaSeqHlembryoCellPolyaME11halfCd1AlnRep1; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqHlembryoCellPolyaME11halfCd1AlnRep1.bam.bai age=E11.5; cell=HeadlessEmbryo; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001989; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqHlembryoCellPolyaME11halfCd1Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=3064c0377ac1b48dba807ce754d7919b; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.5M; strain=CD-1; subId=4423; tableName=wgEncodeUwRnaSeqHlembryoCellPolyaME11halfCd1AlnRep1; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqKidneyCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Kidney; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001990; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqKidneyCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=3358d09ce185be58b71dde817351f614; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.3G; strain=C57BL/6; subId=4424; tableName=wgEncodeUwRnaSeqKidneyCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqKidneyCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Kidney; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001990; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqKidneyCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=a3bbe06530b9e79729a3bcea699c7524; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.3M; strain=C57BL/6; subId=4424; tableName=wgEncodeUwRnaSeqKidneyCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=LgIntestine; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002955; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=4f3f007e1d947e850dac8dc26b6d864c; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.8G; strain=C57BL/6; subId=5335; tableName=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=LgIntestine; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002955; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=e3e487ee167dc24c62668b8d7fa19627; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.4M; strain=C57BL/6; subId=5335; tableName=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=LgIntestine; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002955; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=1b6a55f366997289f2c2d552a074bbfe; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=7.7G; strain=C57BL/6; subId=5336; tableName=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=LgIntestine; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002955; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=70237e99358805b76926b10fba65205b; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.8M; strain=C57BL/6; subId=5336; tableName=wgEncodeUwRnaSeqLgintCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=800233a28ddd873546ce800bdd43d3e7; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.4G; strain=C57BL/6; subId=4426; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=3aaf79803212e95f57a8eeff02240359; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.1M; strain=C57BL/6; subId=4426; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=3d99cf3047ada4bc7a10f85fc25b1c60; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=3.1G; strain=C57BL/6; subId=4438; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=954a97fcb6c2f7f4b3f399aea90c6247; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.3M; strain=C57BL/6; subId=4438; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep3.bam age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep3; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=0902eca75035b45b5e255b04a5825192; organism=mouse; project=wgEncode; readType=1x50; replicate=3; rnaExtract=polyA; sex=M; size=2.7G; strain=C57BL/6; subId=4439; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep3; tissueSourceType=Individual; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep3.bam.bai age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep3; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=4912883e6ca3de9c952e83771e849aba; organism=mouse; project=wgEncode; readType=1x50; replicate=3; rnaExtract=polyA; sex=M; size=5.2M; strain=C57BL/6; subId=4439; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep3; tissueSourceType=Individual; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep4.bam age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep4; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=a679d5ca11112f0a2340a8b692120ce7; organism=mouse; project=wgEncode; readType=1x50; replicate=4; rnaExtract=polyA; sex=M; size=2.9G; strain=C57BL/6; subId=4425; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep4; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep4.bam.bai age=adult-8wks; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001992; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6Rep4; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=7b254f34e4aec3f8574da7bb31312762; organism=mouse; project=wgEncode; readType=1x50; replicate=4; rnaExtract=polyA; sex=M; size=5.3M; strain=C57BL/6; subId=4425; tableName=wgEncodeUwRnaSeqLiverCellPolyaMAdult8wksC57bl6AlnRep4; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6AlnRep1.bam age=E14.5; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001991; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=bd651ec179a8e4de73a6a3111b265512; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.0G; strain=C57BL/6; subId=4427; tableName=wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6AlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6AlnRep1.bam.bai age=E14.5; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001991; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=ebb02d730ab7f6b03ec051f6dca90c51; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.4M; strain=C57BL/6; subId=4427; tableName=wgEncodeUwRnaSeqLiverCellPolyaME14halfC57bl6AlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaME14halfS129AlnRep1.bam age=E14.5; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-13; dateUnrestricted=2012-11-12; dccAccession=wgEncodeEM002961; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaME14halfS129Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=a889b13e40972ded082a9dfea68dd3c8; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.6G; strain=129; subId=5605; tableName=wgEncodeUwRnaSeqLiverCellPolyaME14halfS129AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLiverCellPolyaME14halfS129AlnRep1.bam.bai age=E14.5; cell=Liver; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2012-02-13; dateUnrestricted=2012-11-12; dccAccession=wgEncodeEM002961; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLiverCellPolyaME14halfS129Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=f79f829a2156bb6333cef54b02c50f96; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.3M; strain=129; subId=5605; tableName=wgEncodeUwRnaSeqLiverCellPolyaME14halfS129AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Lung; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002956; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=4d31095a827c62c21406dc6eac37360e; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.2G; strain=C57BL/6; subId=5333; tableName=wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Lung; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002956; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=ef98ecf874c42beba74711db3278e7e0; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.5M; strain=C57BL/6; subId=5333; tableName=wgEncodeUwRnaSeqLungCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep1.bam age=adult-8wks; cell=MEL; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001993; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=26ae2bad9ae7f2b743227e93930626eb; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.5G; strain=Unknown; subId=4433; tableName=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep1.bam.bai age=adult-8wks; cell=MEL; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001993; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=c90f68948ed45f2959e8c24e5ce0e850; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.4M; strain=Unknown; subId=4433; tableName=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep2.bam age=adult-8wks; cell=MEL; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001993; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=698cacf46787a02139c2fdce36dd5ae7; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=2.7G; strain=Unknown; subId=4434; tableName=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep2.bam.bai age=adult-8wks; cell=MEL; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001993; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=ee0b746eb51ba00343d6d65ba90c36da; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.3M; strain=Unknown; subId=4434; tableName=wgEncodeUwRnaSeqMelCellPolyaMImmortalUknAlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep1.bam age=immortalized; cell=NIH-3T3; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM002949; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=9ee0a352da5e68e807577a0537a103e4; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.2G; strain=NIH/Swiss; subId=4435; tableName=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep1.bam.bai age=immortalized; cell=NIH-3T3; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM002949; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsRep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=c8fc571899d5c8f78e801eac6bf530d6; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.4M; strain=NIH/Swiss; subId=4435; tableName=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep2.bam age=immortalized; cell=NIH-3T3; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM002949; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=cb13f31768a12f88b8d328233cbc2e6d; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=3.4G; strain=NIH/Swiss; subId=4436; tableName=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep2.bam.bai age=immortalized; cell=NIH-3T3; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM002949; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsRep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=1861abdfc6a886c0ef82364b5d717f1e; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.4M; strain=NIH/Swiss; subId=4436; tableName=wgEncodeUwRnaSeqNih3t3CellPolyaMImmortalNihsAlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep1.bam age=immortalized; cell=Patski; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-30; dateUnrestricted=2012-03-29; dccAccession=wgEncodeEM002950; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=994c409b0393163db2631dfc9004b43d; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=F; size=2.6G; strain=Spretus.BL6-Xist; subId=4437; tableName=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep1.bam.bai age=immortalized; cell=Patski; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-30; dateUnrestricted=2012-03-29; dccAccession=wgEncodeEM002950; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=c44d40dfc42f5234e1b32f9db0f7fb54; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=F; size=5.3M; strain=Spretus.BL6-Xist; subId=4437; tableName=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep2.bam age=immortalized; cell=Patski; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-23; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002950; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=94b8e2490cb3d7fed800c14f16ec681a; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=F; size=2.5G; strain=Spretus.BL6-Xist; subId=5311; tableName=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep2.bam.bai age=immortalized; cell=Patski; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-23; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002950; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=82d92f79e0ba40ba4e72054860fbe002; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=F; size=5.4M; strain=Spretus.BL6-Xist; subId=5311; tableName=wgEncodeUwRnaSeqPatskiCellPolyaFImmortalSpbl6AlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=SkMuscle; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002957; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=308bedff6f8114b79331e846a8e38415; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=2.1G; strain=C57BL/6; subId=5337; tableName=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=SkMuscle; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002957; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=ae463768cdcd4be57b1adbd118b1bcc3; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.1M; strain=C57BL/6; subId=5337; tableName=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=SkMuscle; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002957; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=79e4beb329a483ac4959def87bf3267c; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=1.7G; strain=C57BL/6; subId=5338; tableName=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=SkMuscle; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002957; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=1ae38bc1f4f815ea40ae48b532ceb3bc; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.0M; strain=C57BL/6; subId=5338; tableName=wgEncodeUwRnaSeqSkmuscleCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqSpleenCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Spleen; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002958; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqSpleenCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=00569387c58640abba118271dc1e60db; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=4.4G; strain=C57BL/6; subId=5339; tableName=wgEncodeUwRnaSeqSpleenCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqSpleenCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Spleen; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002958; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqSpleenCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=63bc96b74ca8a7dc57649c5b4731bce0; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.6M; strain=C57BL/6; subId=5339; tableName=wgEncodeUwRnaSeqSpleenCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=Thymus; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002960; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=b1afe744eb76c97be1ddabd0b242a5f6; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=1.4G; strain=C57BL/6; subId=5340; tableName=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=Thymus; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002960; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=4db0c77537aec18cafbb690e07404e22; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.1M; strain=C57BL/6; subId=5340; tableName=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep2.bam age=adult-8wks; cell=Thymus; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002960; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=5d256d3c9d15263f090ec357cb5070ec; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=2.6G; strain=C57BL/6; subId=5341; tableName=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep2.bam.bai age=adult-8wks; cell=Thymus; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002960; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=fee85991da7818c6696fb5e69dedead4; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.4M; strain=C57BL/6; subId=5341; tableName=wgEncodeUwRnaSeqThymusCellPolyaMAdult8wksC57bl6AlnRep2; tissueSourceType=Pooled; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqTnaiveCellPolyaMAdult8wksC57bl6AlnRep1.bam age=adult-8wks; cell=T-Naive; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002959; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqTnaiveCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=e871195762aa1ab90ad180566ad79d86; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.0G; strain=C57BL/6; subId=5332; tableName=wgEncodeUwRnaSeqTnaiveCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqTnaiveCellPolyaMAdult8wksC57bl6AlnRep1.bam.bai age=adult-8wks; cell=T-Naive; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-12-22; dateUnrestricted=2012-09-22; dccAccession=wgEncodeEM002959; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqTnaiveCellPolyaMAdult8wksC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=f44e9e97a34ff791992186a94d120db5; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.4M; strain=C57BL/6; subId=5332; tableName=wgEncodeUwRnaSeqTnaiveCellPolyaMAdult8wksC57bl6AlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep1.bam age=E14.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001995; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=a1be9c1272ed1a5eb8bf5ec4aa105394; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.5G; strain=C57BL/6; subId=4440; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep1.bam.bai age=E14.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001995; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=8cd2bc24acb4d5866eb51a15349e5e81; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.6M; strain=C57BL/6; subId=4440; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep2.bam age=E14.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001995; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=647365df4111cceae38c88436483f02d; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=2.6G; strain=C57BL/6; subId=4442; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep2.bam.bai age=E14.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-28; dateUnrestricted=2012-03-28; dccAccession=wgEncodeEM001995; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=8c017b4c0e8b91ab2114bd70ef248e63; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.5M; strain=C57BL/6; subId=4442; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME14halfC57bl6AlnRep2; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep1.bam age=E18.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-30; dateUnrestricted=2012-03-29; dccAccession=wgEncodeEM001997; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=d5276ecca97692d29b57b21f588be2c5; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=3.1G; strain=C57BL/6; subId=4443; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep1; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep1.bam.bai age=E18.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-30; dateUnrestricted=2012-03-29; dccAccession=wgEncodeEM001997; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep1; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=fb7b053f59b3bf537476b6233d1aeb1f; organism=mouse; project=wgEncode; readType=1x50; replicate=1; rnaExtract=polyA; sex=M; size=5.6M; strain=C57BL/6; subId=4443; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep1; tissueSourceType=None; type=bai; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep2.bam age=E18.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-30; dateUnrestricted=2012-03-29; dccAccession=wgEncodeEM001997; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=6243497f4887107ceb1b6af407bf4bdf; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=3.1G; strain=C57BL/6; subId=4441; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep2; tissueSourceType=None; type=bam; view=Alignments; http://hgdownload-test.cse.ucsc.edu/goldenPath/mm9/encodeDCC/wgEncodeUwRnaSeq/wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep2.bam.bai age=E18.5; cell=WholeBrain; composite=wgEncodeUwRnaSeq; dataType=RnaSeq; dataVersion=ENCODE Mar 2012 Freeze; dateSubmitted=2011-06-30; dateUnrestricted=2012-03-29; dccAccession=wgEncodeEM001997; grant=Stam; lab=UW-m; labExpId=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6Rep2; labVersion=ABI BioScope v1.2.1; localization=cell; md5sum=688d94351fe2555213f1905a32ddc6e4; organism=mouse; project=wgEncode; readType=1x50; replicate=2; rnaExtract=polyA; sex=M; size=5.6M; strain=C57BL/6; subId=4441; tableName=wgEncodeUwRnaSeqWbrainCellPolyaME18halfC57bl6AlnRep2; tissueSourceType=None; type=bai; view=Alignments;